2021-02-12T20:36:29,654 DEPRECATION: Python 3.5 reached the end of its life on September 13th, 2020. Please upgrade your Python as Python 3.5 is no longer maintained. pip 21.0 will drop support for Python 3.5 in January 2021. pip 21.0 will remove support for this functionality. 2021-02-12T20:36:30,322 Created temporary directory: /tmp/pip-ephem-wheel-cache-bnhxy8i7 2021-02-12T20:36:30,327 Created temporary directory: /tmp/pip-req-tracker-k30ohnv_ 2021-02-12T20:36:30,328 Initialized build tracking at /tmp/pip-req-tracker-k30ohnv_ 2021-02-12T20:36:30,329 Created build tracker: /tmp/pip-req-tracker-k30ohnv_ 2021-02-12T20:36:30,329 Entered build tracker: /tmp/pip-req-tracker-k30ohnv_ 2021-02-12T20:36:30,330 Created temporary directory: /tmp/pip-wheel-6zhkpvjy 2021-02-12T20:36:30,393 1 location(s) to search for versions of python-bioformats: 2021-02-12T20:36:30,393 * https://pypi.org/simple/python-bioformats/ 2021-02-12T20:36:30,394 Fetching project page and analyzing links: https://pypi.org/simple/python-bioformats/ 2021-02-12T20:36:30,396 Getting page https://pypi.org/simple/python-bioformats/ 2021-02-12T20:36:30,400 Found index url https://pypi.org/simple 2021-02-12T20:36:30,763 Found link https://files.pythonhosted.org/packages/e8/d2/3feffac7e5a219de826bc9e56c78b0e63f51dda1623a4a257faa19461d36/python-bioformats-1.0.0pr1.tar.gz#sha256=259117c18990f2c3d4b9c6ec5b3888942b6f9ca804932d27401272013a500ea9 (from https://pypi.org/simple/python-bioformats/), version: 1.0.0pr1 2021-02-12T20:36:30,764 Found link https://files.pythonhosted.org/packages/b9/f8/53a8a14fca7724b245a2bfcf69bd753e85c862f674b9c26b1cc75126eda7/python-bioformats-1.0.0pr2.tar.gz#sha256=9fabdd830c08f144511b4c32f26576106363c0cc993d30a098ecb64e7591631b (from https://pypi.org/simple/python-bioformats/), version: 1.0.0pr2 2021-02-12T20:36:30,766 Found link https://files.pythonhosted.org/packages/f0/c7/7fb50a03bd1a9bfb51a2743e710cd588940f59bdf9525fb6bf019a91dca0/python-bioformats-1.0.0pr3.tar.gz#sha256=f0a431d40ac9ae2573a73c938bb70e2bce256843b0c8bc9ce071f4af233d48d9 (from https://pypi.org/simple/python-bioformats/), version: 1.0.0pr3 2021-02-12T20:36:30,766 Found link https://files.pythonhosted.org/packages/38/77/c318682a2c6c8d500ec872958e87304b88af91658a8fdced9ae2785ad30c/python-bioformats-1.0.0pr7.tar.gz#sha256=3a07dc8327b98eb6acab076626b58e75123e1ed491be0a83cc6ac5adb1b1dd7f (from https://pypi.org/simple/python-bioformats/), version: 1.0.0pr7 2021-02-12T20:36:30,767 Found link https://files.pythonhosted.org/packages/48/cf/a953738d347bbe831228073b51f637a9c22e109950536e10b7181027a16d/python-bioformats-1.0.0pr8.tar.gz#sha256=9581ef8f10c98f63882169b3bad579d0143177fcf4826cc593e8d4378cad72bd (from https://pypi.org/simple/python-bioformats/), version: 1.0.0pr8 2021-02-12T20:36:30,769 Found link https://files.pythonhosted.org/packages/91/1b/4d977041003d61a7877114e1583c849e87abf35627cec20b05bb99bee961/python-bioformats-1.0.0.tar.gz#sha256=1004979909af391f0bbe1aa3c22739f9aae5f8205a56b2301586f480883d11c1 (from https://pypi.org/simple/python-bioformats/), version: 1.0.0 2021-02-12T20:36:30,770 Found link https://files.pythonhosted.org/packages/c6/e8/e429243d1a79bf7f713b7e92aac4bf61eac8c0c1fd3c45b423cb66adeaea/python-bioformats-1.0.1.tar.gz#sha256=2c1b2dac2c950cfebe61e6275d7f815302f55e0ec100c5e49605e792241104bc (from https://pypi.org/simple/python-bioformats/), version: 1.0.1 2021-02-12T20:36:30,771 Found link https://files.pythonhosted.org/packages/d9/bc/4a6e02faf0aed2a913014ea7130ecf8b0c7216e9d706dd3c2853920d87cf/python-bioformats-1.0.1.zip#sha256=f372d8d10a7016a13689a27dd3de68c4978f5f6b05bf7f75602c600fe5000252 (from https://pypi.org/simple/python-bioformats/), version: 1.0.1 2021-02-12T20:36:30,771 Found link https://files.pythonhosted.org/packages/09/76/46e4aa01d4e6dd99647c2b57f280d8509bda7e56985177ca866a7001e486/python-bioformats-1.0.3.zip#sha256=9efc3ac8a7894b64d6eef9de989329cdf8a410e2febf2b1443ecc795da5fec25 (from https://pypi.org/simple/python-bioformats/), version: 1.0.3 2021-02-12T20:36:30,772 Skipping link: unsupported archive 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tags match: py2-none-any: https://files.pythonhosted.org/packages/c4/10/772e58a4da51ea1c58ac1ee840d364d36d85f8552ab573847b3a6eece2a3/python_bioformats-4.0.0rc4-py2-none-any.whl#sha256=0012d647286a01b0d6a0b9d94f40e331cc77e2c946ca353d1b4812c3cd22bfdd (from https://pypi.org/simple/python-bioformats/) 2021-02-12T20:36:30,820 Found link https://files.pythonhosted.org/packages/e2/35/c1d5b33e275c0545083b8cb38213d78f85269a8a3e1859b6b36639e75693/python-bioformats-4.0.0.tar.gz#sha256=9a952de4d326d961af0a497753a4b71b2f7844605023d170c931d3624e036506 (from https://pypi.org/simple/python-bioformats/), version: 4.0.0 2021-02-12T20:36:30,822 Found link https://files.pythonhosted.org/packages/61/64/de0a193af35e7052563a5a7af50461e060780f2a9dc7311504eefe921bb1/python_bioformats-4.0.0-py3-none-any.whl#sha256=53056361d217be870e6071a1d96fecd1519c4a3a3d7c2733b65883e6f124c8d7 (from https://pypi.org/simple/python-bioformats/), version: 4.0.0 2021-02-12T20:36:30,823 Found link https://files.pythonhosted.org/packages/f7/8c/3a767188398d7249ccab64dc2d10a7f016eb92cfd8a42bec4273f6d7d0d6/python-bioformats-4.0.1.macosx-10.15-x86_64.tar.gz#sha256=4c0f7041c81c8bdd1ccf1c5c595ddbe8fbb8f1f0001b1d6270107438fb759462 (from https://pypi.org/simple/python-bioformats/), version: 4.0.1.macosx-10.15-x86_64 2021-02-12T20:36:30,824 Found link https://files.pythonhosted.org/packages/5f/5c/ea252273130843996b17ede65c15d1db313754cf7d9245f7507d8ead177f/python-bioformats-4.0.2.tar.gz#sha256=09e21b16d880c8159a89ae6f44faa494abd32f19c604da19d3e9e092ef555249 (from https://pypi.org/simple/python-bioformats/), version: 4.0.2 2021-02-12T20:36:30,825 Found link https://files.pythonhosted.org/packages/7f/d0/a51de9e7478196fd88df924ae591462f2e3c437718176e8ab6e2ee835010/python-bioformats-4.0.3.tar.gz#sha256=e195be72adcacdb5142a9e850520e6724397813224c1f643b455a1c050b58eae (from https://pypi.org/simple/python-bioformats/), version: 4.0.3 2021-02-12T20:36:30,839 Given no hashes to check 1 links for project 'python-bioformats': discarding no candidates 2021-02-12T20:36:30,871 Collecting python-bioformats==4.0.3 2021-02-12T20:36:30,875 Created temporary directory: /tmp/pip-unpack-xklqv_v5 2021-02-12T20:36:32,769 Downloading python-bioformats-4.0.3.tar.gz (41.4 MB) 2021-02-12T20:36:47,985 Added python-bioformats==4.0.3 from https://files.pythonhosted.org/packages/7f/d0/a51de9e7478196fd88df924ae591462f2e3c437718176e8ab6e2ee835010/python-bioformats-4.0.3.tar.gz#sha256=e195be72adcacdb5142a9e850520e6724397813224c1f643b455a1c050b58eae to build tracker '/tmp/pip-req-tracker-k30ohnv_' 2021-02-12T20:36:47,987 Running setup.py (path:/tmp/pip-wheel-6zhkpvjy/python-bioformats_d6e5857623ec472f8b8250b6c6d8ee0d/setup.py) egg_info for package python-bioformats 2021-02-12T20:36:47,989 Created temporary directory: /tmp/pip-pip-egg-info-_uh1ex5j 2021-02-12T20:36:47,990 Running command python setup.py egg_info 2021-02-12T20:36:50,175 running egg_info 2021-02-12T20:36:50,184 creating /tmp/pip-pip-egg-info-_uh1ex5j/python_bioformats.egg-info 2021-02-12T20:36:50,187 writing /tmp/pip-pip-egg-info-_uh1ex5j/python_bioformats.egg-info/PKG-INFO 2021-02-12T20:36:50,192 writing dependency_links to /tmp/pip-pip-egg-info-_uh1ex5j/python_bioformats.egg-info/dependency_links.txt 2021-02-12T20:36:50,195 writing top-level names to /tmp/pip-pip-egg-info-_uh1ex5j/python_bioformats.egg-info/top_level.txt 2021-02-12T20:36:50,197 writing requirements to /tmp/pip-pip-egg-info-_uh1ex5j/python_bioformats.egg-info/requires.txt 2021-02-12T20:36:50,203 writing manifest file '/tmp/pip-pip-egg-info-_uh1ex5j/python_bioformats.egg-info/SOURCES.txt' 2021-02-12T20:36:50,574 reading manifest file '/tmp/pip-pip-egg-info-_uh1ex5j/python_bioformats.egg-info/SOURCES.txt' 2021-02-12T20:36:50,578 reading manifest template 'MANIFEST.in' 2021-02-12T20:36:50,580 warning: no files found matching '*.py' under directory 'bioformats/tests' 2021-02-12T20:36:50,581 warning: no files found matching '*.tif' under directory 'bioformats/tests' 2021-02-12T20:36:50,582 warning: no files found matching '*.xml' under directory 'bioformats/tests' 2021-02-12T20:36:50,586 writing manifest file '/tmp/pip-pip-egg-info-_uh1ex5j/python_bioformats.egg-info/SOURCES.txt' 2021-02-12T20:36:50,721 Source in /tmp/pip-wheel-6zhkpvjy/python-bioformats_d6e5857623ec472f8b8250b6c6d8ee0d has version 4.0.3, which satisfies requirement python-bioformats==4.0.3 from https://files.pythonhosted.org/packages/7f/d0/a51de9e7478196fd88df924ae591462f2e3c437718176e8ab6e2ee835010/python-bioformats-4.0.3.tar.gz#sha256=e195be72adcacdb5142a9e850520e6724397813224c1f643b455a1c050b58eae 2021-02-12T20:36:50,723 Removed python-bioformats==4.0.3 from https://files.pythonhosted.org/packages/7f/d0/a51de9e7478196fd88df924ae591462f2e3c437718176e8ab6e2ee835010/python-bioformats-4.0.3.tar.gz#sha256=e195be72adcacdb5142a9e850520e6724397813224c1f643b455a1c050b58eae from build tracker '/tmp/pip-req-tracker-k30ohnv_' 2021-02-12T20:36:50,731 Created temporary directory: /tmp/pip-unpack-uzpfszno 2021-02-12T20:36:50,732 Building wheels for collected packages: python-bioformats 2021-02-12T20:36:50,741 Created temporary directory: /tmp/pip-wheel-9m_bzbup 2021-02-12T20:36:50,742 Building wheel for python-bioformats (setup.py): started 2021-02-12T20:36:50,742 Destination directory: /tmp/pip-wheel-9m_bzbup 2021-02-12T20:36:50,743 Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-6zhkpvjy/python-bioformats_d6e5857623ec472f8b8250b6c6d8ee0d/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-6zhkpvjy/python-bioformats_d6e5857623ec472f8b8250b6c6d8ee0d/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-9m_bzbup 2021-02-12T20:36:52,964 running bdist_wheel 2021-02-12T20:36:52,980 running build 2021-02-12T20:36:52,981 running build_py 2021-02-12T20:36:53,324 creating build 2021-02-12T20:36:53,325 creating build/lib 2021-02-12T20:36:53,327 creating build/lib/bioformats 2021-02-12T20:36:53,329 copying bioformats/omexml.py -> build/lib/bioformats 2021-02-12T20:36:53,340 copying bioformats/formatreader.py -> build/lib/bioformats 2021-02-12T20:36:53,348 copying bioformats/formatwriter.py -> build/lib/bioformats 2021-02-12T20:36:53,356 copying bioformats/metadatatools.py -> build/lib/bioformats 2021-02-12T20:36:53,364 copying bioformats/log4j.py -> build/lib/bioformats 2021-02-12T20:36:53,369 copying bioformats/noseplugin.py -> build/lib/bioformats 2021-02-12T20:36:53,373 copying bioformats/__init__.py -> build/lib/bioformats 2021-02-12T20:36:53,380 creating build/lib/bioformats/jars 2021-02-12T20:36:53,382 copying bioformats/jars/bioformats_package.jar -> build/lib/bioformats/jars 2021-02-12T20:36:57,385 installing to build/bdist.linux-armv7l/wheel 2021-02-12T20:36:57,385 running install 2021-02-12T20:36:57,387 running install_lib 2021-02-12T20:36:57,395 creating build/bdist.linux-armv7l 2021-02-12T20:36:57,396 creating build/bdist.linux-armv7l/wheel 2021-02-12T20:36:57,400 creating build/bdist.linux-armv7l/wheel/bioformats 2021-02-12T20:36:57,402 copying build/lib/bioformats/omexml.py -> build/bdist.linux-armv7l/wheel/bioformats 2021-02-12T20:36:57,413 copying build/lib/bioformats/formatreader.py -> build/bdist.linux-armv7l/wheel/bioformats 2021-02-12T20:36:57,423 copying build/lib/bioformats/formatwriter.py -> build/bdist.linux-armv7l/wheel/bioformats 2021-02-12T20:36:57,431 copying build/lib/bioformats/metadatatools.py -> build/bdist.linux-armv7l/wheel/bioformats 2021-02-12T20:36:57,438 copying build/lib/bioformats/log4j.py -> build/bdist.linux-armv7l/wheel/bioformats 2021-02-12T20:36:57,443 copying build/lib/bioformats/noseplugin.py -> build/bdist.linux-armv7l/wheel/bioformats 2021-02-12T20:36:57,451 creating build/bdist.linux-armv7l/wheel/bioformats/jars 2021-02-12T20:36:57,453 copying build/lib/bioformats/jars/bioformats_package.jar -> build/bdist.linux-armv7l/wheel/bioformats/jars 2021-02-12T20:37:01,455 copying build/lib/bioformats/__init__.py -> build/bdist.linux-armv7l/wheel/bioformats 2021-02-12T20:37:01,460 running install_egg_info 2021-02-12T20:37:01,510 running egg_info 2021-02-12T20:37:01,511 writing python_bioformats.egg-info/PKG-INFO 2021-02-12T20:37:01,516 writing top-level names to python_bioformats.egg-info/top_level.txt 2021-02-12T20:37:01,519 writing requirements to python_bioformats.egg-info/requires.txt 2021-02-12T20:37:01,522 writing dependency_links to python_bioformats.egg-info/dependency_links.txt 2021-02-12T20:37:01,538 reading manifest file 'python_bioformats.egg-info/SOURCES.txt' 2021-02-12T20:37:01,543 reading manifest template 'MANIFEST.in' 2021-02-12T20:37:01,544 warning: no files found matching '*.py' under directory 'bioformats/tests' 2021-02-12T20:37:01,545 warning: no files found matching '*.tif' under directory 'bioformats/tests' 2021-02-12T20:37:01,546 warning: no files found matching '*.xml' under directory 'bioformats/tests' 2021-02-12T20:37:01,552 writing manifest file 'python_bioformats.egg-info/SOURCES.txt' 2021-02-12T20:37:01,556 Copying python_bioformats.egg-info to build/bdist.linux-armv7l/wheel/python_bioformats-4.0.3-py3.5.egg-info 2021-02-12T20:37:01,584 running install_scripts 2021-02-12T20:37:01,799 creating build/bdist.linux-armv7l/wheel/python_bioformats-4.0.3.dist-info/WHEEL 2021-02-12T20:37:14,324 Building wheel for python-bioformats (setup.py): finished with status 'done' 2021-02-12T20:37:15,003 Created wheel for python-bioformats: filename=python_bioformats-4.0.3-py3-none-any.whl size=41405974 sha256=e23498d8931c33b7c748420a84f29f6f3e0d86dde2d717fafe7cb2938aba3fab 2021-02-12T20:37:15,004 Stored in directory: /tmp/pip-ephem-wheel-cache-bnhxy8i7/wheels/fd/6b/01/1ee688686c225464a779f3ee8bbefb3f7b875fc231004355fd 2021-02-12T20:37:15,039 Successfully built python-bioformats 2021-02-12T20:37:22,440 Removed build tracker: '/tmp/pip-req-tracker-k30ohnv_'