2021-02-13T15:07:19,633 Created temporary directory: /tmp/pip-ephem-wheel-cache-rz3fpcnc
2021-02-13T15:07:19,637 Created temporary directory: /tmp/pip-req-tracker-n4ncdzgq
2021-02-13T15:07:19,637 Initialized build tracking at /tmp/pip-req-tracker-n4ncdzgq
2021-02-13T15:07:19,637 Created build tracker: /tmp/pip-req-tracker-n4ncdzgq
2021-02-13T15:07:19,637 Entered build tracker: /tmp/pip-req-tracker-n4ncdzgq
2021-02-13T15:07:19,638 Created temporary directory: /tmp/pip-wheel-qd08ry47
2021-02-13T15:07:19,669 1 location(s) to search for versions of fragmenstein:
2021-02-13T15:07:19,669 * https://pypi.org/simple/fragmenstein/
2021-02-13T15:07:19,669 Fetching project page and analyzing links: https://pypi.org/simple/fragmenstein/
2021-02-13T15:07:19,670 Getting page https://pypi.org/simple/fragmenstein/
2021-02-13T15:07:19,672 Found index url https://pypi.org/simple
2021-02-13T15:07:19,761   Found link https://files.pythonhosted.org/packages/79/ea/7241107f42ce973a3d450ec740b88e5c481b09a368f56e472a79a051a272/Fragmenstein-0.6.tar.gz#sha256=8a298c932ea1b6b55131b92b1553b9659c3b7f63a77db39b88e81051980440b6 (from https://pypi.org/simple/fragmenstein/), version: 0.6
2021-02-13T15:07:19,775 Given no hashes to check 1 links for project 'fragmenstein': discarding no candidates
2021-02-13T15:07:19,802 Collecting fragmenstein==0.6
2021-02-13T15:07:19,803   Created temporary directory: /tmp/pip-unpack-h8iykjnd
2021-02-13T15:07:19,865   Downloading Fragmenstein-0.6.tar.gz (7.2 kB)
2021-02-13T15:07:19,896   Added fragmenstein==0.6 from https://files.pythonhosted.org/packages/79/ea/7241107f42ce973a3d450ec740b88e5c481b09a368f56e472a79a051a272/Fragmenstein-0.6.tar.gz#sha256=8a298c932ea1b6b55131b92b1553b9659c3b7f63a77db39b88e81051980440b6 to build tracker '/tmp/pip-req-tracker-n4ncdzgq'
2021-02-13T15:07:19,897     Running setup.py (path:/tmp/pip-wheel-qd08ry47/fragmenstein_26a46f768bc542d38529bea5132aa6ff/setup.py) egg_info for package fragmenstein
2021-02-13T15:07:19,898     Created temporary directory: /tmp/pip-pip-egg-info-u37x5ull
2021-02-13T15:07:19,898     Running command python setup.py egg_info
2021-02-13T15:07:20,862     running egg_info
2021-02-13T15:07:20,864     creating /tmp/pip-pip-egg-info-u37x5ull/Fragmenstein.egg-info
2021-02-13T15:07:20,865     writing /tmp/pip-pip-egg-info-u37x5ull/Fragmenstein.egg-info/PKG-INFO
2021-02-13T15:07:20,867     writing dependency_links to /tmp/pip-pip-egg-info-u37x5ull/Fragmenstein.egg-info/dependency_links.txt
2021-02-13T15:07:20,869     writing requirements to /tmp/pip-pip-egg-info-u37x5ull/Fragmenstein.egg-info/requires.txt
2021-02-13T15:07:20,870     writing top-level names to /tmp/pip-pip-egg-info-u37x5ull/Fragmenstein.egg-info/top_level.txt
2021-02-13T15:07:20,872     writing manifest file '/tmp/pip-pip-egg-info-u37x5ull/Fragmenstein.egg-info/SOURCES.txt'
2021-02-13T15:07:21,014     reading manifest file '/tmp/pip-pip-egg-info-u37x5ull/Fragmenstein.egg-info/SOURCES.txt'
2021-02-13T15:07:21,017     writing manifest file '/tmp/pip-pip-egg-info-u37x5ull/Fragmenstein.egg-info/SOURCES.txt'
2021-02-13T15:07:21,018     /tmp/pip-wheel-qd08ry47/fragmenstein_26a46f768bc542d38529bea5132aa6ff/setup.py:15: UserWarning: This 3.6+ script **requires** rdkit which cannot be pip installed. To install try either conda install -c conda-forge rdkit or sudo apt-get/brew install python3-rdkit or visit rdkit documentation.
2021-02-13T15:07:21,019       'conda install -c conda-forge rdkit or ' +
2021-02-13T15:07:21,019     /tmp/pip-wheel-qd08ry47/fragmenstein_26a46f768bc542d38529bea5132aa6ff/setup.py:19: UserWarning: The minimisation part of this code uses pyrosetta, which has to be downloaded from the Rosetta software site due to licencing. Without it only the classes Monster and Rectifier will work
2021-02-13T15:07:21,019       warn('The minimisation part of this code uses pyrosetta, which has to be downloaded from ' +
2021-02-13T15:07:21,020     /tmp/pip-wheel-qd08ry47/fragmenstein_26a46f768bc542d38529bea5132aa6ff/setup.py:23: UserWarning: The module pymol2 is optionally required (conda or apt-get installable).
2021-02-13T15:07:21,020       warn('The module pymol2 is optionally required (conda or apt-get installable).')
2021-02-13T15:07:21,078   Source in /tmp/pip-wheel-qd08ry47/fragmenstein_26a46f768bc542d38529bea5132aa6ff has version 0.6, which satisfies requirement fragmenstein==0.6 from https://files.pythonhosted.org/packages/79/ea/7241107f42ce973a3d450ec740b88e5c481b09a368f56e472a79a051a272/Fragmenstein-0.6.tar.gz#sha256=8a298c932ea1b6b55131b92b1553b9659c3b7f63a77db39b88e81051980440b6
2021-02-13T15:07:21,079   Removed fragmenstein==0.6 from https://files.pythonhosted.org/packages/79/ea/7241107f42ce973a3d450ec740b88e5c481b09a368f56e472a79a051a272/Fragmenstein-0.6.tar.gz#sha256=8a298c932ea1b6b55131b92b1553b9659c3b7f63a77db39b88e81051980440b6 from build tracker '/tmp/pip-req-tracker-n4ncdzgq'
2021-02-13T15:07:21,083 Created temporary directory: /tmp/pip-unpack-ak8yungq
2021-02-13T15:07:21,084 Building wheels for collected packages: fragmenstein
2021-02-13T15:07:21,088   Created temporary directory: /tmp/pip-wheel-1ve4oaxf
2021-02-13T15:07:21,089   Building wheel for fragmenstein (setup.py): started
2021-02-13T15:07:21,089   Destination directory: /tmp/pip-wheel-1ve4oaxf
2021-02-13T15:07:21,089   Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-qd08ry47/fragmenstein_26a46f768bc542d38529bea5132aa6ff/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-qd08ry47/fragmenstein_26a46f768bc542d38529bea5132aa6ff/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-1ve4oaxf
2021-02-13T15:07:21,885   /tmp/pip-wheel-qd08ry47/fragmenstein_26a46f768bc542d38529bea5132aa6ff/setup.py:15: UserWarning: This 3.6+ script **requires** rdkit which cannot be pip installed. To install try either conda install -c conda-forge rdkit or sudo apt-get/brew install python3-rdkit or visit rdkit documentation.
2021-02-13T15:07:21,886     'conda install -c conda-forge rdkit or ' +
2021-02-13T15:07:21,886   /tmp/pip-wheel-qd08ry47/fragmenstein_26a46f768bc542d38529bea5132aa6ff/setup.py:19: UserWarning: The minimisation part of this code uses pyrosetta, which has to be downloaded from the Rosetta software site due to licencing. Without it only the classes Monster and Rectifier will work
2021-02-13T15:07:21,887     warn('The minimisation part of this code uses pyrosetta, which has to be downloaded from ' +
2021-02-13T15:07:21,887   /tmp/pip-wheel-qd08ry47/fragmenstein_26a46f768bc542d38529bea5132aa6ff/setup.py:23: UserWarning: The module pymol2 is optionally required (conda or apt-get installable).
2021-02-13T15:07:21,887     warn('The module pymol2 is optionally required (conda or apt-get installable).')
2021-02-13T15:07:22,044   running bdist_wheel
2021-02-13T15:07:22,052   running build
2021-02-13T15:07:22,053   running build_py
2021-02-13T15:07:22,185   creating build
2021-02-13T15:07:22,185   creating build/lib
2021-02-13T15:07:22,187   creating build/lib/fragmenstein
2021-02-13T15:07:22,188   copying fragmenstein/m_rmsd.py -> build/lib/fragmenstein
2021-02-13T15:07:22,191   copying fragmenstein/__init__.py -> build/lib/fragmenstein
2021-02-13T15:07:22,196   installing to build/bdist.linux-armv7l/wheel
2021-02-13T15:07:22,196   running install
2021-02-13T15:07:22,197   running install_lib
2021-02-13T15:07:22,201   creating build/bdist.linux-armv7l
2021-02-13T15:07:22,201   creating build/bdist.linux-armv7l/wheel
2021-02-13T15:07:22,204   creating build/bdist.linux-armv7l/wheel/fragmenstein
2021-02-13T15:07:22,205   copying build/lib/fragmenstein/m_rmsd.py -> build/bdist.linux-armv7l/wheel/fragmenstein
2021-02-13T15:07:22,208   copying build/lib/fragmenstein/__init__.py -> build/bdist.linux-armv7l/wheel/fragmenstein
2021-02-13T15:07:22,210   running install_egg_info
2021-02-13T15:07:22,232   running egg_info
2021-02-13T15:07:22,233   writing Fragmenstein.egg-info/PKG-INFO
2021-02-13T15:07:22,235   writing dependency_links to Fragmenstein.egg-info/dependency_links.txt
2021-02-13T15:07:22,237   writing requirements to Fragmenstein.egg-info/requires.txt
2021-02-13T15:07:22,239   writing top-level names to Fragmenstein.egg-info/top_level.txt
2021-02-13T15:07:22,244   reading manifest file 'Fragmenstein.egg-info/SOURCES.txt'
2021-02-13T15:07:22,248   writing manifest file 'Fragmenstein.egg-info/SOURCES.txt'
2021-02-13T15:07:22,249   Copying Fragmenstein.egg-info to build/bdist.linux-armv7l/wheel/Fragmenstein-0.6-py3.7.egg-info
2021-02-13T15:07:22,260   running install_scripts
2021-02-13T15:07:22,343   creating build/bdist.linux-armv7l/wheel/Fragmenstein-0.6.dist-info/WHEEL
2021-02-13T15:07:22,346   creating '/tmp/pip-wheel-1ve4oaxf/Fragmenstein-0.6-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2021-02-13T15:07:22,350   adding 'fragmenstein/__init__.py'
2021-02-13T15:07:22,353   adding 'fragmenstein/m_rmsd.py'
2021-02-13T15:07:22,355   adding 'Fragmenstein-0.6.dist-info/METADATA'
2021-02-13T15:07:22,356   adding 'Fragmenstein-0.6.dist-info/WHEEL'
2021-02-13T15:07:22,357   adding 'Fragmenstein-0.6.dist-info/top_level.txt'
2021-02-13T15:07:22,358   adding 'Fragmenstein-0.6.dist-info/RECORD'
2021-02-13T15:07:22,359   removing build/bdist.linux-armv7l/wheel
2021-02-13T15:07:22,429   Building wheel for fragmenstein (setup.py): finished with status 'done'
2021-02-13T15:07:22,431   Created wheel for fragmenstein: filename=Fragmenstein-0.6-py3-none-any.whl size=5283 sha256=a066df758898ce62bb498e9000e9e60772360c4fba8b4c9b687e0fc1e535a5ca
2021-02-13T15:07:22,432   Stored in directory: /tmp/pip-ephem-wheel-cache-rz3fpcnc/wheels/6e/33/46/a7006401b773641b84b38fbaec141b68c69367107b7f284802
2021-02-13T15:07:22,441 Successfully built fragmenstein
2021-02-13T15:07:22,443 Removed build tracker: '/tmp/pip-req-tracker-n4ncdzgq'