2021-02-13T15:23:18,941 Created temporary directory: /tmp/pip-ephem-wheel-cache-q87f3psw
2021-02-13T15:23:18,944 Created temporary directory: /tmp/pip-req-tracker-0kwfqm_z
2021-02-13T15:23:18,945 Initialized build tracking at /tmp/pip-req-tracker-0kwfqm_z
2021-02-13T15:23:18,945 Created build tracker: /tmp/pip-req-tracker-0kwfqm_z
2021-02-13T15:23:18,945 Entered build tracker: /tmp/pip-req-tracker-0kwfqm_z
2021-02-13T15:23:18,946 Created temporary directory: /tmp/pip-wheel-f_ngkxnv
2021-02-13T15:23:18,981 1 location(s) to search for versions of fragmenstein:
2021-02-13T15:23:18,981 * https://pypi.org/simple/fragmenstein/
2021-02-13T15:23:18,982 Fetching project page and analyzing links: https://pypi.org/simple/fragmenstein/
2021-02-13T15:23:18,982 Getting page https://pypi.org/simple/fragmenstein/
2021-02-13T15:23:18,984 Found index url https://pypi.org/simple
2021-02-13T15:23:19,076   Found link https://files.pythonhosted.org/packages/79/ea/7241107f42ce973a3d450ec740b88e5c481b09a368f56e472a79a051a272/Fragmenstein-0.6.tar.gz#sha256=8a298c932ea1b6b55131b92b1553b9659c3b7f63a77db39b88e81051980440b6 (from https://pypi.org/simple/fragmenstein/), version: 0.6
2021-02-13T15:23:19,077   Found link https://files.pythonhosted.org/packages/a5/40/314e6be38aa08837214d20180853d6f7b1216ce5600cc08b9d2af71fddd1/fragmenstein-0.6.1.tar.gz#sha256=e97aafbe0ea51d18115dcd4107984769da0663cc0a20b53443d7f7aaac9bd701 (from https://pypi.org/simple/fragmenstein/), version: 0.6.1
2021-02-13T15:23:19,090 Given no hashes to check 1 links for project 'fragmenstein': discarding no candidates
2021-02-13T15:23:19,106 Collecting fragmenstein==0.6.1
2021-02-13T15:23:19,108   Created temporary directory: /tmp/pip-unpack-vncyps5y
2021-02-13T15:23:19,183   Downloading fragmenstein-0.6.1.tar.gz (7.2 kB)
2021-02-13T15:23:19,227   Added fragmenstein==0.6.1 from https://files.pythonhosted.org/packages/a5/40/314e6be38aa08837214d20180853d6f7b1216ce5600cc08b9d2af71fddd1/fragmenstein-0.6.1.tar.gz#sha256=e97aafbe0ea51d18115dcd4107984769da0663cc0a20b53443d7f7aaac9bd701 to build tracker '/tmp/pip-req-tracker-0kwfqm_z'
2021-02-13T15:23:19,228     Running setup.py (path:/tmp/pip-wheel-f_ngkxnv/fragmenstein_3505b25eb59247458c26c2d51d159c8e/setup.py) egg_info for package fragmenstein
2021-02-13T15:23:19,229     Created temporary directory: /tmp/pip-pip-egg-info-r2h9zusy
2021-02-13T15:23:19,230     Running command python setup.py egg_info
2021-02-13T15:23:20,229     running egg_info
2021-02-13T15:23:20,231     creating /tmp/pip-pip-egg-info-r2h9zusy/fragmenstein.egg-info
2021-02-13T15:23:20,232     writing /tmp/pip-pip-egg-info-r2h9zusy/fragmenstein.egg-info/PKG-INFO
2021-02-13T15:23:20,236     writing dependency_links to /tmp/pip-pip-egg-info-r2h9zusy/fragmenstein.egg-info/dependency_links.txt
2021-02-13T15:23:20,238     writing requirements to /tmp/pip-pip-egg-info-r2h9zusy/fragmenstein.egg-info/requires.txt
2021-02-13T15:23:20,239     writing top-level names to /tmp/pip-pip-egg-info-r2h9zusy/fragmenstein.egg-info/top_level.txt
2021-02-13T15:23:20,241     writing manifest file '/tmp/pip-pip-egg-info-r2h9zusy/fragmenstein.egg-info/SOURCES.txt'
2021-02-13T15:23:20,391     reading manifest file '/tmp/pip-pip-egg-info-r2h9zusy/fragmenstein.egg-info/SOURCES.txt'
2021-02-13T15:23:20,394     writing manifest file '/tmp/pip-pip-egg-info-r2h9zusy/fragmenstein.egg-info/SOURCES.txt'
2021-02-13T15:23:20,395     /tmp/pip-wheel-f_ngkxnv/fragmenstein_3505b25eb59247458c26c2d51d159c8e/setup.py:15: UserWarning: This 3.6+ script **requires** rdkit which cannot be pip installed. To install try either conda install -c conda-forge rdkit or sudo apt-get/brew install python3-rdkit or visit rdkit documentation.
2021-02-13T15:23:20,396       'conda install -c conda-forge rdkit or ' +
2021-02-13T15:23:20,396     /tmp/pip-wheel-f_ngkxnv/fragmenstein_3505b25eb59247458c26c2d51d159c8e/setup.py:19: UserWarning: The minimisation part of this code uses pyrosetta, which has to be downloaded from the Rosetta software site due to licencing. Without it only the classes Monster and Rectifier will work
2021-02-13T15:23:20,397       warn('The minimisation part of this code uses pyrosetta, which has to be downloaded from ' +
2021-02-13T15:23:20,397     /tmp/pip-wheel-f_ngkxnv/fragmenstein_3505b25eb59247458c26c2d51d159c8e/setup.py:23: UserWarning: The module pymol2 is optionally required (conda or apt-get installable).
2021-02-13T15:23:20,398       warn('The module pymol2 is optionally required (conda or apt-get installable).')
2021-02-13T15:23:20,456   Source in /tmp/pip-wheel-f_ngkxnv/fragmenstein_3505b25eb59247458c26c2d51d159c8e has version 0.6.1, which satisfies requirement fragmenstein==0.6.1 from https://files.pythonhosted.org/packages/a5/40/314e6be38aa08837214d20180853d6f7b1216ce5600cc08b9d2af71fddd1/fragmenstein-0.6.1.tar.gz#sha256=e97aafbe0ea51d18115dcd4107984769da0663cc0a20b53443d7f7aaac9bd701
2021-02-13T15:23:20,457   Removed fragmenstein==0.6.1 from https://files.pythonhosted.org/packages/a5/40/314e6be38aa08837214d20180853d6f7b1216ce5600cc08b9d2af71fddd1/fragmenstein-0.6.1.tar.gz#sha256=e97aafbe0ea51d18115dcd4107984769da0663cc0a20b53443d7f7aaac9bd701 from build tracker '/tmp/pip-req-tracker-0kwfqm_z'
2021-02-13T15:23:20,461 Created temporary directory: /tmp/pip-unpack-kxk2dxnt
2021-02-13T15:23:20,462 Building wheels for collected packages: fragmenstein
2021-02-13T15:23:20,466   Created temporary directory: /tmp/pip-wheel-v9xmsata
2021-02-13T15:23:20,467   Building wheel for fragmenstein (setup.py): started
2021-02-13T15:23:20,467   Destination directory: /tmp/pip-wheel-v9xmsata
2021-02-13T15:23:20,467   Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-f_ngkxnv/fragmenstein_3505b25eb59247458c26c2d51d159c8e/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-f_ngkxnv/fragmenstein_3505b25eb59247458c26c2d51d159c8e/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-v9xmsata
2021-02-13T15:23:21,280   /tmp/pip-wheel-f_ngkxnv/fragmenstein_3505b25eb59247458c26c2d51d159c8e/setup.py:15: UserWarning: This 3.6+ script **requires** rdkit which cannot be pip installed. To install try either conda install -c conda-forge rdkit or sudo apt-get/brew install python3-rdkit or visit rdkit documentation.
2021-02-13T15:23:21,280     'conda install -c conda-forge rdkit or ' +
2021-02-13T15:23:21,281   /tmp/pip-wheel-f_ngkxnv/fragmenstein_3505b25eb59247458c26c2d51d159c8e/setup.py:19: UserWarning: The minimisation part of this code uses pyrosetta, which has to be downloaded from the Rosetta software site due to licencing. Without it only the classes Monster and Rectifier will work
2021-02-13T15:23:21,281     warn('The minimisation part of this code uses pyrosetta, which has to be downloaded from ' +
2021-02-13T15:23:21,281   /tmp/pip-wheel-f_ngkxnv/fragmenstein_3505b25eb59247458c26c2d51d159c8e/setup.py:23: UserWarning: The module pymol2 is optionally required (conda or apt-get installable).
2021-02-13T15:23:21,281     warn('The module pymol2 is optionally required (conda or apt-get installable).')
2021-02-13T15:23:21,448   running bdist_wheel
2021-02-13T15:23:21,457   running build
2021-02-13T15:23:21,457   running build_py
2021-02-13T15:23:21,594   creating build
2021-02-13T15:23:21,594   creating build/lib
2021-02-13T15:23:21,595   creating build/lib/fragmenstein
2021-02-13T15:23:21,596   copying fragmenstein/m_rmsd.py -> build/lib/fragmenstein
2021-02-13T15:23:21,599   copying fragmenstein/__init__.py -> build/lib/fragmenstein
2021-02-13T15:23:21,605   installing to build/bdist.linux-armv7l/wheel
2021-02-13T15:23:21,605   running install
2021-02-13T15:23:21,606   running install_lib
2021-02-13T15:23:21,610   creating build/bdist.linux-armv7l
2021-02-13T15:23:21,611   creating build/bdist.linux-armv7l/wheel
2021-02-13T15:23:21,613   creating build/bdist.linux-armv7l/wheel/fragmenstein
2021-02-13T15:23:21,615   copying build/lib/fragmenstein/m_rmsd.py -> build/bdist.linux-armv7l/wheel/fragmenstein
2021-02-13T15:23:21,618   copying build/lib/fragmenstein/__init__.py -> build/bdist.linux-armv7l/wheel/fragmenstein
2021-02-13T15:23:21,620   running install_egg_info
2021-02-13T15:23:21,644   running egg_info
2021-02-13T15:23:21,645   creating fragmenstein.egg-info
2021-02-13T15:23:21,646   writing fragmenstein.egg-info/PKG-INFO
2021-02-13T15:23:21,649   writing dependency_links to fragmenstein.egg-info/dependency_links.txt
2021-02-13T15:23:21,651   writing requirements to fragmenstein.egg-info/requires.txt
2021-02-13T15:23:21,653   writing top-level names to fragmenstein.egg-info/top_level.txt
2021-02-13T15:23:21,654   writing manifest file 'fragmenstein.egg-info/SOURCES.txt'
2021-02-13T15:23:21,658   reading manifest file 'fragmenstein.egg-info/SOURCES.txt'
2021-02-13T15:23:21,662   writing manifest file 'fragmenstein.egg-info/SOURCES.txt'
2021-02-13T15:23:21,664   Copying fragmenstein.egg-info to build/bdist.linux-armv7l/wheel/fragmenstein-0.6.1-py3.7.egg-info
2021-02-13T15:23:21,679   running install_scripts
2021-02-13T15:23:21,777   creating build/bdist.linux-armv7l/wheel/fragmenstein-0.6.1.dist-info/WHEEL
2021-02-13T15:23:21,781   creating '/tmp/pip-wheel-v9xmsata/fragmenstein-0.6.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2021-02-13T15:23:21,786   adding 'fragmenstein/__init__.py'
2021-02-13T15:23:21,789   adding 'fragmenstein/m_rmsd.py'
2021-02-13T15:23:21,792   adding 'fragmenstein-0.6.1.dist-info/METADATA'
2021-02-13T15:23:21,794   adding 'fragmenstein-0.6.1.dist-info/WHEEL'
2021-02-13T15:23:21,795   adding 'fragmenstein-0.6.1.dist-info/top_level.txt'
2021-02-13T15:23:21,795   adding 'fragmenstein-0.6.1.dist-info/RECORD'
2021-02-13T15:23:21,796   removing build/bdist.linux-armv7l/wheel
2021-02-13T15:23:21,870   Building wheel for fragmenstein (setup.py): finished with status 'done'
2021-02-13T15:23:21,873   Created wheel for fragmenstein: filename=fragmenstein-0.6.1-py3-none-any.whl size=5302 sha256=0a434b2df199f1664c61f14d7307e316f5e1bd615eb3995fe740fa9b43567360
2021-02-13T15:23:21,873   Stored in directory: /tmp/pip-ephem-wheel-cache-q87f3psw/wheels/e2/07/6c/e0e31d060f8b7d9e947551c1c555db066442382f0e05e59713
2021-02-13T15:23:21,882 Successfully built fragmenstein
2021-02-13T15:23:21,885 Removed build tracker: '/tmp/pip-req-tracker-0kwfqm_z'