2021-02-18T16:50:47,841 Created temporary directory: /tmp/pip-ephem-wheel-cache-ofj19vrj 2021-02-18T16:50:47,844 Created temporary directory: /tmp/pip-req-tracker-r31rkz2f 2021-02-18T16:50:47,844 Initialized build tracking at /tmp/pip-req-tracker-r31rkz2f 2021-02-18T16:50:47,844 Created build tracker: /tmp/pip-req-tracker-r31rkz2f 2021-02-18T16:50:47,844 Entered build tracker: /tmp/pip-req-tracker-r31rkz2f 2021-02-18T16:50:47,845 Created temporary directory: /tmp/pip-wheel-o497sc80 2021-02-18T16:50:47,881 1 location(s) to search for versions of rdkit-to-params: 2021-02-18T16:50:47,881 * https://pypi.org/simple/rdkit-to-params/ 2021-02-18T16:50:47,882 Fetching project page and analyzing links: https://pypi.org/simple/rdkit-to-params/ 2021-02-18T16:50:47,882 Getting page https://pypi.org/simple/rdkit-to-params/ 2021-02-18T16:50:47,884 Found index url https://pypi.org/simple 2021-02-18T16:50:47,982 Found link https://files.pythonhosted.org/packages/ef/e8/7a8a812f8d2954b8acdb661bcc9ee5a9d67dae96f96a66d75de2e90282d3/rdkit_to_params-1.tar.gz#sha256=56b7e26a5622a7ac90e54b8a3f4fab79cc8bb63b102aafb3f8c17bcf26df2df3 (from https://pypi.org/simple/rdkit-to-params/) (requires-python:>3.6), version: 1 2021-02-18T16:50:47,983 Found link https://files.pythonhosted.org/packages/54/ce/55e4c99a7500a7db8e785ee282208e50ee8dc541089185144622c9cecdcc/rdkit_to_params-1.0.1.tar.gz#sha256=d11f52ee51e9f79cf3befa26a9669fe7c99be41fff8c654293e5a63136b844f0 (from https://pypi.org/simple/rdkit-to-params/) (requires-python:>3.6), version: 1.0.1 2021-02-18T16:50:47,984 Found link https://files.pythonhosted.org/packages/14/06/f2f72e757eb7deea040c09abef0173a5e6f1023de515afee19d060b9a5f1/rdkit_to_params-1.0.2.tar.gz#sha256=5e169dd2a511f6d4a6747b46010b0d1a165d1ee5a34dd16614b87289d0d344e5 (from https://pypi.org/simple/rdkit-to-params/) (requires-python:>3.6), version: 1.0.2 2021-02-18T16:50:47,984 Found link https://files.pythonhosted.org/packages/cd/23/11617c465b9f3dc6ca9f52356ff4ac3e2f80211800b4205b8123a68a7f73/rdkit_to_params-1.0.4.tar.gz#sha256=74031df79149b4069dc924aa73df9e62dba77d7200473ad02c320c2cfd572aa5 (from https://pypi.org/simple/rdkit-to-params/) (requires-python:>3.6), version: 1.0.4 2021-02-18T16:50:47,985 Found link https://files.pythonhosted.org/packages/53/71/fa36800525e407ac79c355f6e97fefdb808964a7df1e43a088d396654c19/rdkit_to_params-1.0.5.tar.gz#sha256=39461952a6c30a27a23b57a99ca389e4b28d02a53e29d60ad3e9a86395965b3a (from https://pypi.org/simple/rdkit-to-params/) (requires-python:>3.6), version: 1.0.5 2021-02-18T16:50:47,985 Found link https://files.pythonhosted.org/packages/45/0b/867d72723c27a00cc7f330417d6f7268c777b8795bd946fc89786a0f39b0/rdkit_to_params-1.1.0.tar.gz#sha256=c182be58feb386ccb242ccfea7910d18ef6efefbf682c3ecc85088b2c053ba91 (from https://pypi.org/simple/rdkit-to-params/) (requires-python:>3.6), version: 1.1.0 2021-02-18T16:50:47,986 Found link https://files.pythonhosted.org/packages/5b/52/a15ce15be2ad2bd3606c4d9cc0055261cd7eafd098cf9a31dee9f931290a/rdkit_to_params-1.1.1.tar.gz#sha256=4b3a7e70b33bdfc7994cfad00199f794e38f6c9cf88d82ceb78eddf1f2dace9d (from https://pypi.org/simple/rdkit-to-params/) (requires-python:>3.6), version: 1.1.1 2021-02-18T16:50:47,986 Found link https://files.pythonhosted.org/packages/1d/2b/97d12fe38813b96f303f04ed4e2e77f5ee540ad683ff79a21c822c047298/rdkit_to_params-1.1.2.tar.gz#sha256=1967c3716553dd6a34ae8805adc65cbd49646ad28b9386dff094b0dd824283ba (from https://pypi.org/simple/rdkit-to-params/) (requires-python:>3.6), version: 1.1.2 2021-02-18T16:50:47,987 Found link https://files.pythonhosted.org/packages/cf/11/4a451d52b8540a19ae08f28cbec4db146f4d11760133163a94808498f433/rdkit_to_params-1.1.3.tar.gz#sha256=5cdd2f3f7f0751bd2065756ac36147254ca6d87b835828a1f7e5bad1500d7450 (from https://pypi.org/simple/rdkit-to-params/) (requires-python:>3.6), version: 1.1.3 2021-02-18T16:50:47,987 Found link https://files.pythonhosted.org/packages/1f/86/5cdd42d226f7f8dafa43fc9f891a39f8a1689648cfdf0b3653f9fea4c9e9/rdkit_to_params-1.1.4b0.tar.gz#sha256=c1b4c083274f84ff5394d17728cd409fa87418618fdf4c146c47e2947f9c7be7 (from https://pypi.org/simple/rdkit-to-params/) (requires-python:>3.6), version: 1.1.4b0 2021-02-18T16:50:47,988 Found link https://files.pythonhosted.org/packages/cd/9d/b405411dd2b049a635c2629fd62cc23a5b881bf85db16557d8bd02a85f8a/rdkit_to_params-1.1.4.tar.gz#sha256=173a7a029628cccba4ccd041b60dd8144dbc884fd9430f7ffb64a5153ad2531d (from https://pypi.org/simple/rdkit-to-params/) (requires-python:>3.6), version: 1.1.4 2021-02-18T16:50:47,988 Found link https://files.pythonhosted.org/packages/6e/7d/0ad2b20f89b42b7fb4799b474cff2000529df5b64fac11581103b293c899/rdkit_to_params-1.1.5.tar.gz#sha256=1610c7c8f44d6eb028baeebbc028cf96a3262c5f344262713820b1eb1a7d5d43 (from https://pypi.org/simple/rdkit-to-params/) (requires-python:>3.6), version: 1.1.5 2021-02-18T16:50:48,004 Given no hashes to check 1 links for project 'rdkit-to-params': discarding no candidates 2021-02-18T16:50:48,019 Collecting rdkit-to-params==1.1.5 2021-02-18T16:50:48,022 Created temporary directory: /tmp/pip-unpack-xw15vcz3 2021-02-18T16:50:48,215 Downloading rdkit_to_params-1.1.5.tar.gz (41 kB) 2021-02-18T16:50:48,309 Added rdkit-to-params==1.1.5 from https://files.pythonhosted.org/packages/6e/7d/0ad2b20f89b42b7fb4799b474cff2000529df5b64fac11581103b293c899/rdkit_to_params-1.1.5.tar.gz#sha256=1610c7c8f44d6eb028baeebbc028cf96a3262c5f344262713820b1eb1a7d5d43 to build tracker '/tmp/pip-req-tracker-r31rkz2f' 2021-02-18T16:50:48,310 Running setup.py (path:/tmp/pip-wheel-o497sc80/rdkit-to-params_95f61327b1df4849958a795e6a150dd8/setup.py) egg_info for package rdkit-to-params 2021-02-18T16:50:48,311 Created temporary directory: /tmp/pip-pip-egg-info-26eykyq_ 2021-02-18T16:50:48,311 Running command python setup.py egg_info 2021-02-18T16:50:49,296 running egg_info 2021-02-18T16:50:49,299 creating /tmp/pip-pip-egg-info-26eykyq_/rdkit_to_params.egg-info 2021-02-18T16:50:49,300 writing /tmp/pip-pip-egg-info-26eykyq_/rdkit_to_params.egg-info/PKG-INFO 2021-02-18T16:50:49,304 writing dependency_links to /tmp/pip-pip-egg-info-26eykyq_/rdkit_to_params.egg-info/dependency_links.txt 2021-02-18T16:50:49,305 writing entry points to /tmp/pip-pip-egg-info-26eykyq_/rdkit_to_params.egg-info/entry_points.txt 2021-02-18T16:50:49,308 writing top-level names to /tmp/pip-pip-egg-info-26eykyq_/rdkit_to_params.egg-info/top_level.txt 2021-02-18T16:50:49,310 writing manifest file '/tmp/pip-pip-egg-info-26eykyq_/rdkit_to_params.egg-info/SOURCES.txt' 2021-02-18T16:50:49,457 reading manifest file '/tmp/pip-pip-egg-info-26eykyq_/rdkit_to_params.egg-info/SOURCES.txt' 2021-02-18T16:50:49,460 writing manifest file '/tmp/pip-pip-egg-info-26eykyq_/rdkit_to_params.egg-info/SOURCES.txt' 2021-02-18T16:50:49,462 /tmp/pip-wheel-o497sc80/rdkit-to-params_95f61327b1df4849958a795e6a150dd8/setup.py:29: UserWarning: Albeit optional, a lot of this code relies on rdkit which cannot be pip installed.To install try either conda install -c conda-forge rdkit or sudo apt-get/brew install python3-rdkit or visit rdkit documentation. 2021-02-18T16:50:49,462 'conda install -c conda-forge rdkit or ' + 2021-02-18T16:50:49,462 /tmp/pip-wheel-o497sc80/rdkit-to-params_95f61327b1df4849958a795e6a150dd8/setup.py:33: UserWarning: The minimisation part of this code uses pyrosetta, which has to be downloaded from the Rosetta software site due to licencing. Without it only the classes Monster and Rectifier will work 2021-02-18T16:50:49,463 warn('The minimisation part of this code uses pyrosetta, which has to be downloaded from ' + 2021-02-18T16:50:49,524 Source in /tmp/pip-wheel-o497sc80/rdkit-to-params_95f61327b1df4849958a795e6a150dd8 has version 1.1.5, which satisfies requirement rdkit-to-params==1.1.5 from https://files.pythonhosted.org/packages/6e/7d/0ad2b20f89b42b7fb4799b474cff2000529df5b64fac11581103b293c899/rdkit_to_params-1.1.5.tar.gz#sha256=1610c7c8f44d6eb028baeebbc028cf96a3262c5f344262713820b1eb1a7d5d43 2021-02-18T16:50:49,525 Removed rdkit-to-params==1.1.5 from https://files.pythonhosted.org/packages/6e/7d/0ad2b20f89b42b7fb4799b474cff2000529df5b64fac11581103b293c899/rdkit_to_params-1.1.5.tar.gz#sha256=1610c7c8f44d6eb028baeebbc028cf96a3262c5f344262713820b1eb1a7d5d43 from build tracker '/tmp/pip-req-tracker-r31rkz2f' 2021-02-18T16:50:49,533 Created temporary directory: /tmp/pip-unpack-mcf6sxdj 2021-02-18T16:50:49,533 Building wheels for collected packages: rdkit-to-params 2021-02-18T16:50:49,538 Created temporary directory: /tmp/pip-wheel-ia8qh80u 2021-02-18T16:50:49,538 Building wheel for rdkit-to-params (setup.py): started 2021-02-18T16:50:49,539 Destination directory: /tmp/pip-wheel-ia8qh80u 2021-02-18T16:50:49,539 Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-o497sc80/rdkit-to-params_95f61327b1df4849958a795e6a150dd8/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-o497sc80/rdkit-to-params_95f61327b1df4849958a795e6a150dd8/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-ia8qh80u 2021-02-18T16:50:50,360 /tmp/pip-wheel-o497sc80/rdkit-to-params_95f61327b1df4849958a795e6a150dd8/setup.py:29: UserWarning: Albeit optional, a lot of this code relies on rdkit which cannot be pip installed.To install try either conda install -c conda-forge rdkit or sudo apt-get/brew install python3-rdkit or visit rdkit documentation. 2021-02-18T16:50:50,361 'conda install -c conda-forge rdkit or ' + 2021-02-18T16:50:50,361 /tmp/pip-wheel-o497sc80/rdkit-to-params_95f61327b1df4849958a795e6a150dd8/setup.py:33: UserWarning: The minimisation part of this code uses pyrosetta, which has to be downloaded from the Rosetta software site due to licencing. Without it only the classes Monster and Rectifier will work 2021-02-18T16:50:50,361 warn('The minimisation part of this code uses pyrosetta, which has to be downloaded from ' + 2021-02-18T16:50:50,513 running bdist_wheel 2021-02-18T16:50:50,520 running build 2021-02-18T16:50:50,521 running build_py 2021-02-18T16:50:50,655 creating build 2021-02-18T16:50:50,656 creating build/lib 2021-02-18T16:50:50,657 creating build/lib/tests 2021-02-18T16:50:50,659 copying tests/__init__.py -> build/lib/tests 2021-02-18T16:50:50,662 creating build/lib/rdkit_to_params 2021-02-18T16:50:50,663 copying rdkit_to_params/constraint.py -> build/lib/rdkit_to_params 2021-02-18T16:50:50,666 copying rdkit_to_params/_init_mixin.py -> build/lib/rdkit_to_params 2021-02-18T16:50:50,668 copying rdkit_to_params/_io_mixin.py -> build/lib/rdkit_to_params 2021-02-18T16:50:50,670 copying rdkit_to_params/_pyrosetta_mixin.py -> build/lib/rdkit_to_params 2021-02-18T16:50:50,672 copying rdkit_to_params/__init__.py -> build/lib/rdkit_to_params 2021-02-18T16:50:50,675 copying rdkit_to_params/entries.py -> build/lib/rdkit_to_params 2021-02-18T16:50:50,680 creating build/lib/rdkit_to_params/rdkitside 2021-02-18T16:50:50,681 copying rdkit_to_params/rdkitside/_rdkit_prep.py -> build/lib/rdkit_to_params/rdkitside 2021-02-18T16:50:50,685 copying rdkit_to_params/rdkitside/_rdkit_inits.py -> build/lib/rdkit_to_params/rdkitside 2021-02-18T16:50:50,687 copying rdkit_to_params/rdkitside/_rdkit_rename.py -> build/lib/rdkit_to_params/rdkitside 2021-02-18T16:50:50,690 copying rdkit_to_params/rdkitside/_rdkit_convert.py -> build/lib/rdkit_to_params/rdkitside 2021-02-18T16:50:50,693 copying rdkit_to_params/rdkitside/__init__.py -> build/lib/rdkit_to_params/rdkitside 2021-02-18T16:50:50,695 creating build/lib/rdkit_to_params/cli 2021-02-18T16:50:50,696 copying rdkit_to_params/cli/__init__.py -> build/lib/rdkit_to_params/cli 2021-02-18T16:50:50,705 installing to build/bdist.linux-armv7l/wheel 2021-02-18T16:50:50,705 running install 2021-02-18T16:50:50,706 running install_lib 2021-02-18T16:50:50,710 creating build/bdist.linux-armv7l 2021-02-18T16:50:50,711 creating build/bdist.linux-armv7l/wheel 2021-02-18T16:50:50,713 creating build/bdist.linux-armv7l/wheel/tests 2021-02-18T16:50:50,714 copying build/lib/tests/__init__.py -> build/bdist.linux-armv7l/wheel/tests 2021-02-18T16:50:50,717 creating build/bdist.linux-armv7l/wheel/rdkit_to_params 2021-02-18T16:50:50,718 copying build/lib/rdkit_to_params/constraint.py -> build/bdist.linux-armv7l/wheel/rdkit_to_params 2021-02-18T16:50:50,722 copying build/lib/rdkit_to_params/_init_mixin.py -> build/bdist.linux-armv7l/wheel/rdkit_to_params 2021-02-18T16:50:50,726 creating build/bdist.linux-armv7l/wheel/rdkit_to_params/rdkitside 2021-02-18T16:50:50,727 copying build/lib/rdkit_to_params/rdkitside/_rdkit_prep.py -> build/bdist.linux-armv7l/wheel/rdkit_to_params/rdkitside 2021-02-18T16:50:50,731 copying build/lib/rdkit_to_params/rdkitside/_rdkit_inits.py -> build/bdist.linux-armv7l/wheel/rdkit_to_params/rdkitside 2021-02-18T16:50:50,734 copying build/lib/rdkit_to_params/rdkitside/_rdkit_rename.py -> build/bdist.linux-armv7l/wheel/rdkit_to_params/rdkitside 2021-02-18T16:50:50,737 copying build/lib/rdkit_to_params/rdkitside/_rdkit_convert.py -> build/bdist.linux-armv7l/wheel/rdkit_to_params/rdkitside 2021-02-18T16:50:50,740 copying build/lib/rdkit_to_params/rdkitside/__init__.py -> build/bdist.linux-armv7l/wheel/rdkit_to_params/rdkitside 2021-02-18T16:50:50,743 copying build/lib/rdkit_to_params/_io_mixin.py -> build/bdist.linux-armv7l/wheel/rdkit_to_params 2021-02-18T16:50:50,745 copying build/lib/rdkit_to_params/_pyrosetta_mixin.py -> build/bdist.linux-armv7l/wheel/rdkit_to_params 2021-02-18T16:50:50,748 creating build/bdist.linux-armv7l/wheel/rdkit_to_params/cli 2021-02-18T16:50:50,750 copying build/lib/rdkit_to_params/cli/__init__.py -> build/bdist.linux-armv7l/wheel/rdkit_to_params/cli 2021-02-18T16:50:50,752 copying build/lib/rdkit_to_params/__init__.py -> build/bdist.linux-armv7l/wheel/rdkit_to_params 2021-02-18T16:50:50,755 copying build/lib/rdkit_to_params/entries.py -> build/bdist.linux-armv7l/wheel/rdkit_to_params 2021-02-18T16:50:50,758 running install_egg_info 2021-02-18T16:50:50,782 running egg_info 2021-02-18T16:50:50,783 writing rdkit_to_params.egg-info/PKG-INFO 2021-02-18T16:50:50,786 writing dependency_links to rdkit_to_params.egg-info/dependency_links.txt 2021-02-18T16:50:50,788 writing entry points to rdkit_to_params.egg-info/entry_points.txt 2021-02-18T16:50:50,790 writing top-level names to rdkit_to_params.egg-info/top_level.txt 2021-02-18T16:50:50,796 reading manifest file 'rdkit_to_params.egg-info/SOURCES.txt' 2021-02-18T16:50:50,801 writing manifest file 'rdkit_to_params.egg-info/SOURCES.txt' 2021-02-18T16:50:50,803 Copying rdkit_to_params.egg-info to build/bdist.linux-armv7l/wheel/rdkit_to_params-1.1.5-py3.7.egg-info 2021-02-18T16:50:50,816 running install_scripts 2021-02-18T16:50:50,901 creating build/bdist.linux-armv7l/wheel/rdkit_to_params-1.1.5.dist-info/WHEEL 2021-02-18T16:50:50,904 creating '/tmp/pip-wheel-ia8qh80u/rdkit_to_params-1.1.5-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2021-02-18T16:50:50,908 adding 'rdkit_to_params/__init__.py' 2021-02-18T16:50:50,910 adding 'rdkit_to_params/_init_mixin.py' 2021-02-18T16:50:50,911 adding 'rdkit_to_params/_io_mixin.py' 2021-02-18T16:50:50,913 adding 'rdkit_to_params/_pyrosetta_mixin.py' 2021-02-18T16:50:50,915 adding 'rdkit_to_params/constraint.py' 2021-02-18T16:50:50,918 adding 'rdkit_to_params/entries.py' 2021-02-18T16:50:50,920 adding 'rdkit_to_params/cli/__init__.py' 2021-02-18T16:50:50,922 adding 'rdkit_to_params/rdkitside/__init__.py' 2021-02-18T16:50:50,924 adding 'rdkit_to_params/rdkitside/_rdkit_convert.py' 2021-02-18T16:50:50,926 adding 'rdkit_to_params/rdkitside/_rdkit_inits.py' 2021-02-18T16:50:50,930 adding 'rdkit_to_params/rdkitside/_rdkit_prep.py' 2021-02-18T16:50:50,932 adding 'rdkit_to_params/rdkitside/_rdkit_rename.py' 2021-02-18T16:50:50,935 adding 'tests/__init__.py' 2021-02-18T16:50:50,937 adding 'rdkit_to_params-1.1.5.dist-info/METADATA' 2021-02-18T16:50:50,939 adding 'rdkit_to_params-1.1.5.dist-info/WHEEL' 2021-02-18T16:50:50,940 adding 'rdkit_to_params-1.1.5.dist-info/entry_points.txt' 2021-02-18T16:50:50,941 adding 'rdkit_to_params-1.1.5.dist-info/top_level.txt' 2021-02-18T16:50:50,941 adding 'rdkit_to_params-1.1.5.dist-info/RECORD' 2021-02-18T16:50:50,943 removing build/bdist.linux-armv7l/wheel 2021-02-18T16:50:51,018 Building wheel for rdkit-to-params (setup.py): finished with status 'done' 2021-02-18T16:50:51,021 Created wheel for rdkit-to-params: filename=rdkit_to_params-1.1.5-py3-none-any.whl size=41950 sha256=26ade56dd22354912f8ad6a7fa7dd17687c77194e8d98c13bba3007d7ad19d98 2021-02-18T16:50:51,021 Stored in directory: /tmp/pip-ephem-wheel-cache-ofj19vrj/wheels/76/8e/7e/4f200254592645d41efa99aed877c1548df79f78e11dfa7ecd 2021-02-18T16:50:51,032 Successfully built rdkit-to-params 2021-02-18T16:50:51,036 Removed build tracker: '/tmp/pip-req-tracker-r31rkz2f'