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https://files.pythonhosted.org/packages/d8/23/2d8a77861f1c1e066a6d8edc217c9217641a6e7ca5cdd5539ccd1b6ab8b9/jcvi-1.0.14.tar.gz#sha256=2fda3b5e0dc9dcf0fb30578033d9274a99723b54ce6e514936f9dbd2c872f626 (from https://pypi.org/simple/jcvi/), version: 1.0.14 2021-02-18T16:58:39,657 Found link https://files.pythonhosted.org/packages/74/c8/e384f7963f349e571795468fbabf451aa903825736fde6e9d3474c238463/jcvi-1.1.1.tar.gz#sha256=ad22b0efeeb8d9fa3e9a66871b796f6fc2072e4cb48491f5b18602e585b468bb (from https://pypi.org/simple/jcvi/), version: 1.1.1 2021-02-18T16:58:39,657 Found link https://files.pythonhosted.org/packages/8f/06/0a6cdc66e7ef36c658c8867b0573c72aa7b2394759a69ed9aa5d64aa2f51/jcvi-1.1.2.tar.gz#sha256=82c914195ac82b3770bce0e0754671871a139c5c4c52158ae4723ec76c975194 (from https://pypi.org/simple/jcvi/), version: 1.1.2 2021-02-18T16:58:39,657 Found link https://files.pythonhosted.org/packages/f3/4d/90ec025ffba6064f62d2480deebee2096b1c581484f5deb807081f68b826/jcvi-1.1.3.tar.gz#sha256=bff23cbdfa634dd22beff778e7405d509414d3a98b7531397b03db3e0f7037e5 (from https://pypi.org/simple/jcvi/), version: 1.1.3 2021-02-18T16:58:39,658 Found link https://files.pythonhosted.org/packages/aa/77/af2e6dbb516a39b09f908e85b2e1f52c8003bcf822f59434b1241da7d057/jcvi-1.1.4.tar.gz#sha256=de96b414804a5a9884845cc5923e6772339ea86b3aae40d02841e59944ce1777 (from https://pypi.org/simple/jcvi/), version: 1.1.4 2021-02-18T16:58:39,658 Found link https://files.pythonhosted.org/packages/32/89/5d32094c25a676e1d43eec6c4cc8f6eeef77f939286faece04986ef491bd/jcvi-1.1.5.tar.gz#sha256=9879ca50acfbc2f42afd26a7c211ae3653edfc70fcafa4848985c215a51dbe0b (from https://pypi.org/simple/jcvi/), version: 1.1.5 2021-02-18T16:58:39,658 Found link https://files.pythonhosted.org/packages/31/b4/f7d533c9099a7be91b964685e2d86f1986e25c45c6ec7174528f95d4c732/jcvi-1.1.6.tar.gz#sha256=c3a54f22140e4e3962f3cb05a5d9c47952d48b67d0459bf499193828018255a3 (from https://pypi.org/simple/jcvi/), version: 1.1.6 2021-02-18T16:58:39,659 Found link https://files.pythonhosted.org/packages/01/be/3ae008ee2b3a53b46f8953bbaf1c5372b5faaf790ee7c5813201d50fbdaf/jcvi-1.1.7.tar.gz#sha256=2709f0e2420da0f9d5a5da581f8f19bd54d7bb9a9720f0d0e9141f30e84b5ab2 (from https://pypi.org/simple/jcvi/), version: 1.1.7 2021-02-18T16:58:39,659 Found link https://files.pythonhosted.org/packages/01/54/44acf2550250a12ea505f2b4be565357d06bdc87d7ea575f955ae98e9700/jcvi-1.1.8.tar.gz#sha256=8d4ce6586068e6a2fa6e39303f5dab1b6f068a1335be09e2488c5f9387685228 (from https://pypi.org/simple/jcvi/), version: 1.1.8 2021-02-18T16:58:39,681 Given no hashes to check 1 links for project 'jcvi': discarding no candidates 2021-02-18T16:58:39,696 Collecting jcvi==1.1.8 2021-02-18T16:58:39,698 Created temporary directory: /tmp/pip-unpack-3nwn9n2r 2021-02-18T16:58:39,741 Downloading jcvi-1.1.8.tar.gz (819 kB) 2021-02-18T16:58:40,575 Added jcvi==1.1.8 from https://files.pythonhosted.org/packages/01/54/44acf2550250a12ea505f2b4be565357d06bdc87d7ea575f955ae98e9700/jcvi-1.1.8.tar.gz#sha256=8d4ce6586068e6a2fa6e39303f5dab1b6f068a1335be09e2488c5f9387685228 to build tracker '/tmp/pip-req-tracker-pjkve2zj' 2021-02-18T16:58:40,576 Running setup.py (path:/tmp/pip-wheel-wqipozxu/jcvi_c152d89b263a4f1180f2c7133e41101c/setup.py) egg_info for package jcvi 2021-02-18T16:58:40,577 Created temporary directory: /tmp/pip-pip-egg-info-l9p0wj1c 2021-02-18T16:58:40,578 Running command python setup.py egg_info 2021-02-18T16:58:42,328 running egg_info 2021-02-18T16:58:42,330 creating /tmp/pip-pip-egg-info-l9p0wj1c/jcvi.egg-info 2021-02-18T16:58:42,331 writing /tmp/pip-pip-egg-info-l9p0wj1c/jcvi.egg-info/PKG-INFO 2021-02-18T16:58:42,334 writing dependency_links to /tmp/pip-pip-egg-info-l9p0wj1c/jcvi.egg-info/dependency_links.txt 2021-02-18T16:58:42,337 writing requirements to /tmp/pip-pip-egg-info-l9p0wj1c/jcvi.egg-info/requires.txt 2021-02-18T16:58:42,338 writing top-level names to /tmp/pip-pip-egg-info-l9p0wj1c/jcvi.egg-info/top_level.txt 2021-02-18T16:58:42,340 writing manifest file '/tmp/pip-pip-egg-info-l9p0wj1c/jcvi.egg-info/SOURCES.txt' 2021-02-18T16:58:42,367 reading manifest file '/tmp/pip-pip-egg-info-l9p0wj1c/jcvi.egg-info/SOURCES.txt' 2021-02-18T16:58:42,368 reading manifest template 'MANIFEST.in' 2021-02-18T16:58:42,381 writing manifest file '/tmp/pip-pip-egg-info-l9p0wj1c/jcvi.egg-info/SOURCES.txt' 2021-02-18T16:58:42,383 /usr/local/lib/python3.7/dist-packages/setuptools/dist.py:461: UserWarning: Normalizing 'v1.1.8' to '1.1.8' 2021-02-18T16:58:42,383 warnings.warn(tmpl.format(**locals())) 2021-02-18T16:58:42,479 Source in /tmp/pip-wheel-wqipozxu/jcvi_c152d89b263a4f1180f2c7133e41101c has version 1.1.8, which satisfies requirement jcvi==1.1.8 from https://files.pythonhosted.org/packages/01/54/44acf2550250a12ea505f2b4be565357d06bdc87d7ea575f955ae98e9700/jcvi-1.1.8.tar.gz#sha256=8d4ce6586068e6a2fa6e39303f5dab1b6f068a1335be09e2488c5f9387685228 2021-02-18T16:58:42,480 Removed jcvi==1.1.8 from https://files.pythonhosted.org/packages/01/54/44acf2550250a12ea505f2b4be565357d06bdc87d7ea575f955ae98e9700/jcvi-1.1.8.tar.gz#sha256=8d4ce6586068e6a2fa6e39303f5dab1b6f068a1335be09e2488c5f9387685228 from build tracker '/tmp/pip-req-tracker-pjkve2zj' 2021-02-18T16:58:42,486 Created temporary directory: /tmp/pip-unpack-oix8auj8 2021-02-18T16:58:42,486 Building wheels for collected packages: jcvi 2021-02-18T16:58:42,491 Created temporary directory: /tmp/pip-wheel-jb_qo824 2021-02-18T16:58:42,492 Building wheel for jcvi (setup.py): started 2021-02-18T16:58:42,492 Destination directory: /tmp/pip-wheel-jb_qo824 2021-02-18T16:58:42,492 Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-wqipozxu/jcvi_c152d89b263a4f1180f2c7133e41101c/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-wqipozxu/jcvi_c152d89b263a4f1180f2c7133e41101c/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-jb_qo824 2021-02-18T16:58:44,016 /usr/local/lib/python3.7/dist-packages/setuptools/dist.py:461: UserWarning: Normalizing 'v1.1.8' to '1.1.8' 2021-02-18T16:58:44,016 warnings.warn(tmpl.format(**locals())) 2021-02-18T16:58:44,077 running bdist_wheel 2021-02-18T16:58:44,082 running build 2021-02-18T16:58:44,082 running build_py 2021-02-18T16:58:44,088 creating build 2021-02-18T16:58:44,088 creating build/lib.linux-armv7l-3.7 2021-02-18T16:58:44,089 creating build/lib.linux-armv7l-3.7/jcvi 2021-02-18T16:58:44,090 copying jcvi/_version.py -> build/lib.linux-armv7l-3.7/jcvi 2021-02-18T16:58:44,093 copying jcvi/__init__.py -> build/lib.linux-armv7l-3.7/jcvi 2021-02-18T16:58:44,096 creating build/lib.linux-armv7l-3.7/jcvi/annotation 2021-02-18T16:58:44,097 copying jcvi/annotation/ahrd.py -> build/lib.linux-armv7l-3.7/jcvi/annotation 2021-02-18T16:58:44,100 copying jcvi/annotation/qc.py -> build/lib.linux-armv7l-3.7/jcvi/annotation 2021-02-18T16:58:44,102 copying jcvi/annotation/evm.py -> build/lib.linux-armv7l-3.7/jcvi/annotation 2021-02-18T16:58:44,105 copying jcvi/annotation/reformat.py -> build/lib.linux-armv7l-3.7/jcvi/annotation 2021-02-18T16:58:44,314 copying jcvi/annotation/train.py -> build/lib.linux-armv7l-3.7/jcvi/annotation 2021-02-18T16:58:44,319 copying jcvi/annotation/pasa.py -> build/lib.linux-armv7l-3.7/jcvi/annotation 2021-02-18T16:58:44,324 copying jcvi/annotation/depth.py -> build/lib.linux-armv7l-3.7/jcvi/annotation 2021-02-18T16:58:44,329 copying jcvi/annotation/stats.py -> build/lib.linux-armv7l-3.7/jcvi/annotation 2021-02-18T16:58:44,334 copying jcvi/annotation/maker.py -> build/lib.linux-armv7l-3.7/jcvi/annotation 2021-02-18T16:58:44,339 copying jcvi/annotation/__init__.py -> build/lib.linux-armv7l-3.7/jcvi/annotation 2021-02-18T16:58:44,341 copying jcvi/annotation/__main__.py -> build/lib.linux-armv7l-3.7/jcvi/annotation 2021-02-18T16:58:44,344 copying jcvi/annotation/automaton.py -> build/lib.linux-armv7l-3.7/jcvi/annotation 2021-02-18T16:58:44,349 creating build/lib.linux-armv7l-3.7/jcvi/compara 2021-02-18T16:58:44,350 copying jcvi/compara/phylogeny.py -> build/lib.linux-armv7l-3.7/jcvi/compara 2021-02-18T16:58:44,353 copying jcvi/compara/fractionation.py -> build/lib.linux-armv7l-3.7/jcvi/compara 2021-02-18T16:58:44,357 copying jcvi/compara/quota.py -> build/lib.linux-armv7l-3.7/jcvi/compara 2021-02-18T16:58:44,360 copying jcvi/compara/synteny.py -> build/lib.linux-armv7l-3.7/jcvi/compara 2021-02-18T16:58:44,365 copying jcvi/compara/blastfilter.py -> build/lib.linux-armv7l-3.7/jcvi/compara 2021-02-18T16:58:44,368 copying jcvi/compara/reconstruct.py -> build/lib.linux-armv7l-3.7/jcvi/compara 2021-02-18T16:58:44,371 copying jcvi/compara/synfind.py -> build/lib.linux-armv7l-3.7/jcvi/compara 2021-02-18T16:58:44,374 copying jcvi/compara/__init__.py -> build/lib.linux-armv7l-3.7/jcvi/compara 2021-02-18T16:58:44,376 copying jcvi/compara/__main__.py -> build/lib.linux-armv7l-3.7/jcvi/compara 2021-02-18T16:58:44,379 copying jcvi/compara/catalog.py -> build/lib.linux-armv7l-3.7/jcvi/compara 2021-02-18T16:58:44,382 copying jcvi/compara/pad.py -> build/lib.linux-armv7l-3.7/jcvi/compara 2021-02-18T16:58:44,387 creating build/lib.linux-armv7l-3.7/jcvi/graphics 2021-02-18T16:58:44,388 copying jcvi/graphics/histogram.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-02-18T16:58:44,392 copying jcvi/graphics/chromosome.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-02-18T16:58:44,396 copying jcvi/graphics/wheel.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-02-18T16:58:44,400 copying jcvi/graphics/blastplot.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-02-18T16:58:44,403 copying jcvi/graphics/align.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-02-18T16:58:44,406 copying jcvi/graphics/heatmap.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-02-18T16:58:44,410 copying jcvi/graphics/base.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-02-18T16:58:44,414 copying jcvi/graphics/glyph.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-02-18T16:58:44,417 copying jcvi/graphics/table.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-02-18T16:58:44,421 copying jcvi/graphics/mummerplot.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-02-18T16:58:44,423 copying jcvi/graphics/coverage.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-02-18T16:58:44,426 copying jcvi/graphics/tree.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-02-18T16:58:44,431 copying jcvi/graphics/synteny.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-02-18T16:58:44,435 copying jcvi/graphics/graph.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-02-18T16:58:44,438 copying jcvi/graphics/assembly.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-02-18T16:58:44,441 copying jcvi/graphics/logo.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-02-18T16:58:44,443 copying jcvi/graphics/landscape.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-02-18T16:58:44,447 copying jcvi/graphics/grabseeds.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-02-18T16:58:44,451 copying jcvi/graphics/__init__.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-02-18T16:58:44,453 copying jcvi/graphics/__main__.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-02-18T16:58:44,456 copying jcvi/graphics/dotplot.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-02-18T16:58:44,459 copying jcvi/graphics/whisker.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-02-18T16:58:44,462 copying jcvi/graphics/karyotype.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-02-18T16:58:44,466 creating build/lib.linux-armv7l-3.7/jcvi/projects 2021-02-18T16:58:44,467 copying jcvi/projects/bites.py -> build/lib.linux-armv7l-3.7/jcvi/projects 2021-02-18T16:58:44,471 copying jcvi/projects/str.py -> build/lib.linux-armv7l-3.7/jcvi/projects 2021-02-18T16:58:44,477 copying jcvi/projects/vanilla.py -> build/lib.linux-armv7l-3.7/jcvi/projects 2021-02-18T16:58:44,480 copying jcvi/projects/tgbs.py -> build/lib.linux-armv7l-3.7/jcvi/projects 2021-02-18T16:58:44,483 copying jcvi/projects/ies.py -> build/lib.linux-armv7l-3.7/jcvi/projects 2021-02-18T16:58:44,486 copying jcvi/projects/alfalfa.py -> build/lib.linux-armv7l-3.7/jcvi/projects 2021-02-18T16:58:44,489 copying jcvi/projects/age.py -> build/lib.linux-armv7l-3.7/jcvi/projects 2021-02-18T16:58:44,492 copying jcvi/projects/sugarcane.py -> build/lib.linux-armv7l-3.7/jcvi/projects 2021-02-18T16:58:44,496 copying jcvi/projects/napus.py -> build/lib.linux-armv7l-3.7/jcvi/projects 2021-02-18T16:58:44,499 copying jcvi/projects/allmaps.py -> build/lib.linux-armv7l-3.7/jcvi/projects 2021-02-18T16:58:44,502 copying jcvi/projects/pineapple.py -> build/lib.linux-armv7l-3.7/jcvi/projects 2021-02-18T16:58:44,505 copying jcvi/projects/heterosis.py -> build/lib.linux-armv7l-3.7/jcvi/projects 2021-02-18T16:58:44,508 copying jcvi/projects/synfind.py -> build/lib.linux-armv7l-3.7/jcvi/projects 2021-02-18T16:58:44,512 copying jcvi/projects/__init__.py -> build/lib.linux-armv7l-3.7/jcvi/projects 2021-02-18T16:58:44,514 copying jcvi/projects/misc.py -> build/lib.linux-armv7l-3.7/jcvi/projects 2021-02-18T16:58:44,519 copying jcvi/projects/__main__.py -> build/lib.linux-armv7l-3.7/jcvi/projects 2021-02-18T16:58:44,522 copying jcvi/projects/pistachio.py -> build/lib.linux-armv7l-3.7/jcvi/projects 2021-02-18T16:58:44,526 creating build/lib.linux-armv7l-3.7/jcvi/apps 2021-02-18T16:58:44,527 copying jcvi/apps/blastplus.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-02-18T16:58:44,530 copying jcvi/apps/r.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-02-18T16:58:44,533 copying jcvi/apps/restriction.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-02-18T16:58:44,535 copying jcvi/apps/align.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-02-18T16:58:44,539 copying jcvi/apps/emboss.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-02-18T16:58:44,541 copying jcvi/apps/base.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-02-18T16:58:44,547 copying jcvi/apps/uclust.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-02-18T16:58:44,551 copying jcvi/apps/bwa.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-02-18T16:58:44,554 copying jcvi/apps/grid.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-02-18T16:58:44,559 copying jcvi/apps/gmap.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-02-18T16:58:44,562 copying jcvi/apps/bowtie.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-02-18T16:58:44,565 copying jcvi/apps/cap3.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-02-18T16:58:44,568 copying jcvi/apps/biomart.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-02-18T16:58:44,571 copying jcvi/apps/script.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-02-18T16:58:44,574 copying jcvi/apps/lastz.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-02-18T16:58:44,576 copying jcvi/apps/phylo.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-02-18T16:58:44,581 copying jcvi/apps/vecscreen.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-02-18T16:58:44,584 copying jcvi/apps/cdhit.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-02-18T16:58:44,587 copying jcvi/apps/ks.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-02-18T16:58:44,591 copying jcvi/apps/mask.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-02-18T16:58:44,594 copying jcvi/apps/gbsubmit.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-02-18T16:58:44,597 copying jcvi/apps/uniprot.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-02-18T16:58:44,600 copying jcvi/apps/softlink.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-02-18T16:58:44,603 copying jcvi/apps/__init__.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-02-18T16:58:44,605 copying jcvi/apps/__main__.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-02-18T16:58:44,619 copying jcvi/apps/fetch.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-02-18T16:58:44,625 creating build/lib.linux-armv7l-3.7/jcvi/utils 2021-02-18T16:58:44,627 copying jcvi/utils/cbook.py -> build/lib.linux-armv7l-3.7/jcvi/utils 2021-02-18T16:58:44,631 copying jcvi/utils/taxonomy.py -> build/lib.linux-armv7l-3.7/jcvi/utils 2021-02-18T16:58:44,635 copying jcvi/utils/webcolors.py -> build/lib.linux-armv7l-3.7/jcvi/utils 2021-02-18T16:58:44,638 copying jcvi/utils/console.py -> build/lib.linux-armv7l-3.7/jcvi/utils 2021-02-18T16:58:44,641 copying jcvi/utils/aws.py -> build/lib.linux-armv7l-3.7/jcvi/utils 2021-02-18T16:58:44,644 copying jcvi/utils/table.py -> build/lib.linux-armv7l-3.7/jcvi/utils 2021-02-18T16:58:44,647 copying jcvi/utils/ez_setup.py -> build/lib.linux-armv7l-3.7/jcvi/utils 2021-02-18T16:58:44,650 copying jcvi/utils/range.py -> build/lib.linux-armv7l-3.7/jcvi/utils 2021-02-18T16:58:44,653 copying jcvi/utils/db.py -> build/lib.linux-armv7l-3.7/jcvi/utils 2021-02-18T16:58:44,656 copying jcvi/utils/grouper.py -> build/lib.linux-armv7l-3.7/jcvi/utils 2021-02-18T16:58:44,658 copying jcvi/utils/__init__.py -> build/lib.linux-armv7l-3.7/jcvi/utils 2021-02-18T16:58:44,660 copying jcvi/utils/__main__.py -> build/lib.linux-armv7l-3.7/jcvi/utils 2021-02-18T16:58:44,662 copying jcvi/utils/orderedcollections.py -> build/lib.linux-armv7l-3.7/jcvi/utils 2021-02-18T16:58:44,667 creating build/lib.linux-armv7l-3.7/jcvi/assembly 2021-02-18T16:58:44,669 copying jcvi/assembly/postprocess.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-02-18T16:58:44,672 copying jcvi/assembly/syntenypath.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-02-18T16:58:44,675 copying jcvi/assembly/hic.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-02-18T16:58:44,680 copying jcvi/assembly/meraculous.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-02-18T16:58:44,682 copying jcvi/assembly/base.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-02-18T16:58:44,684 copying jcvi/assembly/amos.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-02-18T16:58:44,687 copying jcvi/assembly/coverage.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-02-18T16:58:44,689 copying jcvi/assembly/soap.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-02-18T16:58:44,691 copying jcvi/assembly/geneticmap.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-02-18T16:58:44,694 copying jcvi/assembly/allpaths.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-02-18T16:58:44,697 copying jcvi/assembly/pbjelly.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-02-18T16:58:44,700 copying jcvi/assembly/gaps.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-02-18T16:58:44,702 copying jcvi/assembly/sim.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-02-18T16:58:44,705 copying jcvi/assembly/allmaps.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-02-18T16:58:44,710 copying jcvi/assembly/patch.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-02-18T16:58:44,714 copying jcvi/assembly/bambus.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-02-18T16:58:44,716 copying jcvi/assembly/opticalmap.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-02-18T16:58:44,719 copying jcvi/assembly/trinity.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-02-18T16:58:44,721 copying jcvi/assembly/unitig.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-02-18T16:58:44,724 copying jcvi/assembly/preprocess.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-02-18T16:58:44,727 copying jcvi/assembly/goldenpath.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-02-18T16:58:44,730 copying jcvi/assembly/sspace.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-02-18T16:58:44,733 copying jcvi/assembly/__init__.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-02-18T16:58:44,734 copying jcvi/assembly/__main__.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-02-18T16:58:44,736 copying jcvi/assembly/ca.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-02-18T16:58:44,740 copying jcvi/assembly/automaton.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-02-18T16:58:44,742 copying jcvi/assembly/kmer.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-02-18T16:58:44,748 creating build/lib.linux-armv7l-3.7/jcvi/formats 2021-02-18T16:58:44,748 copying jcvi/formats/maf.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-02-18T16:58:44,751 copying jcvi/formats/fpc.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-02-18T16:58:44,753 copying jcvi/formats/bed.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-02-18T16:58:44,757 copying jcvi/formats/posmap.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-02-18T16:58:44,760 copying jcvi/formats/blast.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-02-18T16:58:44,763 copying jcvi/formats/psl.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-02-18T16:58:44,766 copying jcvi/formats/chain.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-02-18T16:58:44,768 copying jcvi/formats/pdf.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-02-18T16:58:44,770 copying jcvi/formats/base.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-02-18T16:58:44,774 copying jcvi/formats/gff.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-02-18T16:58:44,779 copying jcvi/formats/obo.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-02-18T16:58:44,781 copying jcvi/formats/genbank.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-02-18T16:58:44,784 copying jcvi/formats/sbt.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-02-18T16:58:44,786 copying jcvi/formats/agp.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-02-18T16:58:44,791 copying jcvi/formats/ace.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-02-18T16:58:44,793 copying jcvi/formats/paf.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-02-18T16:58:44,795 copying jcvi/formats/fastq.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-02-18T16:58:44,798 copying jcvi/formats/contig.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-02-18T16:58:44,801 copying jcvi/formats/coords.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-02-18T16:58:44,803 copying jcvi/formats/excel.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-02-18T16:58:44,806 copying jcvi/formats/btab.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-02-18T16:58:44,808 copying jcvi/formats/html.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-02-18T16:58:44,811 copying jcvi/formats/vcf.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-02-18T16:58:44,814 copying jcvi/formats/sizes.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-02-18T16:58:44,816 copying jcvi/formats/__init__.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-02-18T16:58:44,818 copying jcvi/formats/__main__.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-02-18T16:58:44,820 copying jcvi/formats/sam.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-02-18T16:58:44,823 copying jcvi/formats/cdt.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-02-18T16:58:44,825 copying jcvi/formats/pyblast.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-02-18T16:58:44,828 copying jcvi/formats/fasta.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-02-18T16:58:44,834 creating build/lib.linux-armv7l-3.7/jcvi/algorithms 2021-02-18T16:58:44,836 copying jcvi/algorithms/supermap.py -> build/lib.linux-armv7l-3.7/jcvi/algorithms 2021-02-18T16:58:44,839 copying jcvi/algorithms/ec.py -> build/lib.linux-armv7l-3.7/jcvi/algorithms 2021-02-18T16:58:44,842 copying jcvi/algorithms/formula.py -> build/lib.linux-armv7l-3.7/jcvi/algorithms 2021-02-18T16:58:44,844 copying jcvi/algorithms/tsp.py -> build/lib.linux-armv7l-3.7/jcvi/algorithms 2021-02-18T16:58:44,847 copying jcvi/algorithms/lis.py -> build/lib.linux-armv7l-3.7/jcvi/algorithms 2021-02-18T16:58:44,850 copying jcvi/algorithms/lpsolve.py -> build/lib.linux-armv7l-3.7/jcvi/algorithms 2021-02-18T16:58:44,854 copying jcvi/algorithms/graph.py -> build/lib.linux-armv7l-3.7/jcvi/algorithms 2021-02-18T16:58:44,857 copying jcvi/algorithms/maxsum.py -> build/lib.linux-armv7l-3.7/jcvi/algorithms 2021-02-18T16:58:44,860 copying jcvi/algorithms/__init__.py -> build/lib.linux-armv7l-3.7/jcvi/algorithms 2021-02-18T16:58:44,862 copying jcvi/algorithms/__main__.py -> build/lib.linux-armv7l-3.7/jcvi/algorithms 2021-02-18T16:58:44,864 copying jcvi/algorithms/ml.py -> build/lib.linux-armv7l-3.7/jcvi/algorithms 2021-02-18T16:58:44,866 copying jcvi/algorithms/matrix.py -> build/lib.linux-armv7l-3.7/jcvi/algorithms 2021-02-18T16:58:44,870 creating build/lib.linux-armv7l-3.7/jcvi/variation 2021-02-18T16:58:44,871 copying jcvi/variation/tassel.py -> build/lib.linux-armv7l-3.7/jcvi/variation 2021-02-18T16:58:44,874 copying jcvi/variation/str.py -> build/lib.linux-armv7l-3.7/jcvi/variation 2021-02-18T16:58:44,878 copying jcvi/variation/delly.py -> build/lib.linux-armv7l-3.7/jcvi/variation 2021-02-18T16:58:44,881 copying jcvi/variation/cnv.py -> build/lib.linux-armv7l-3.7/jcvi/variation 2021-02-18T16:58:44,885 copying jcvi/variation/deconvolute.py -> build/lib.linux-armv7l-3.7/jcvi/variation 2021-02-18T16:58:44,887 copying jcvi/variation/phase.py -> build/lib.linux-armv7l-3.7/jcvi/variation 2021-02-18T16:58:44,890 copying jcvi/variation/snp.py -> build/lib.linux-armv7l-3.7/jcvi/variation 2021-02-18T16:58:44,892 copying jcvi/variation/__init__.py -> build/lib.linux-armv7l-3.7/jcvi/variation 2021-02-18T16:58:44,894 copying jcvi/variation/__main__.py -> build/lib.linux-armv7l-3.7/jcvi/variation 2021-02-18T16:58:44,896 copying jcvi/variation/impute.py -> build/lib.linux-armv7l-3.7/jcvi/variation 2021-02-18T16:58:44,899 creating build/lib.linux-armv7l-3.7/jcvi/utils/data 2021-02-18T16:58:44,900 copying jcvi/utils/data/__init__.py -> build/lib.linux-armv7l-3.7/jcvi/utils/data 2021-02-18T16:58:44,901 running egg_info 2021-02-18T16:58:44,912 writing jcvi.egg-info/PKG-INFO 2021-02-18T16:58:44,915 writing dependency_links to jcvi.egg-info/dependency_links.txt 2021-02-18T16:58:44,917 writing requirements to jcvi.egg-info/requires.txt 2021-02-18T16:58:44,919 writing top-level names to jcvi.egg-info/top_level.txt 2021-02-18T16:58:44,941 reading manifest file 'jcvi.egg-info/SOURCES.txt' 2021-02-18T16:58:44,948 reading manifest template 'MANIFEST.in' 2021-02-18T16:58:44,985 writing manifest file 'jcvi.egg-info/SOURCES.txt' 2021-02-18T16:58:44,992 copying jcvi/assembly/chic.pyx -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-02-18T16:58:44,995 copying jcvi/formats/cblast.pyx -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-02-18T16:58:44,997 copying jcvi/utils/data/Airswing.ttf -> build/lib.linux-armv7l-3.7/jcvi/utils/data 2021-02-18T16:58:45,001 copying jcvi/utils/data/Collegia.ttf -> build/lib.linux-armv7l-3.7/jcvi/utils/data 2021-02-18T16:58:45,053 copying jcvi/utils/data/HookedUp.ttf -> build/lib.linux-armv7l-3.7/jcvi/utils/data 2021-02-18T16:58:45,058 copying jcvi/utils/data/Humor-Sans.ttf -> build/lib.linux-armv7l-3.7/jcvi/utils/data 2021-02-18T16:58:45,064 copying jcvi/utils/data/TREDs.meta.csv -> build/lib.linux-armv7l-3.7/jcvi/utils/data 2021-02-18T16:58:45,070 copying jcvi/utils/data/adapters.fasta -> build/lib.linux-armv7l-3.7/jcvi/utils/data 2021-02-18T16:58:45,073 copying jcvi/utils/data/blosum80.mat -> build/lib.linux-armv7l-3.7/jcvi/utils/data 2021-02-18T16:58:45,076 copying jcvi/utils/data/chrY.hg38.unique_ccn.gc -> build/lib.linux-armv7l-3.7/jcvi/utils/data 2021-02-18T16:58:45,080 copying jcvi/utils/data/colorchecker.txt -> build/lib.linux-armv7l-3.7/jcvi/utils/data 2021-02-18T16:58:45,083 copying jcvi/utils/data/hg38.band.txt -> build/lib.linux-armv7l-3.7/jcvi/utils/data 2021-02-18T16:58:45,092 copying jcvi/utils/data/hg38.chrom.sizes -> build/lib.linux-armv7l-3.7/jcvi/utils/data 2021-02-18T16:58:45,096 copying jcvi/utils/data/instance.json -> build/lib.linux-armv7l-3.7/jcvi/utils/data 2021-02-18T16:58:45,118 UPDATING build/lib.linux-armv7l-3.7/jcvi/_version.py 2021-02-18T16:58:45,120 set build/lib.linux-armv7l-3.7/jcvi/_version.py to 'v1.1.8' 2021-02-18T16:58:45,120 running build_ext 2021-02-18T16:58:45,193 cythoning jcvi/assembly/chic.pyx to jcvi/assembly/chic.c 2021-02-18T16:58:45,800 /usr/local/lib/python3.7/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-wqipozxu/jcvi_c152d89b263a4f1180f2c7133e41101c/jcvi/assembly/chic.pyx 2021-02-18T16:58:45,801 tree = Parsing.p_module(s, pxd, full_module_name) 2021-02-18T16:58:47,316 cythoning jcvi/formats/cblast.pyx to jcvi/formats/cblast.c 2021-02-18T16:58:47,323 /usr/local/lib/python3.7/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-wqipozxu/jcvi_c152d89b263a4f1180f2c7133e41101c/jcvi/formats/cblast.pyx 2021-02-18T16:58:47,323 tree = Parsing.p_module(s, pxd, full_module_name) 2021-02-18T16:58:47,958 building 'jcvi.assembly.chic' extension 2021-02-18T16:58:47,959 creating build/temp.linux-armv7l-3.7 2021-02-18T16:58:47,959 creating build/temp.linux-armv7l-3.7/jcvi 2021-02-18T16:58:47,960 creating build/temp.linux-armv7l-3.7/jcvi/assembly 2021-02-18T16:58:47,961 arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/lib/python3.7/dist-packages/numpy/core/include -I/usr/include/python3.7m -c jcvi/assembly/chic.c -o build/temp.linux-armv7l-3.7/jcvi/assembly/chic.o -O3 2021-02-18T16:58:48,363 In file included from /usr/local/lib/python3.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1944, 2021-02-18T16:58:48,364 from /usr/local/lib/python3.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2021-02-18T16:58:48,364 from /usr/local/lib/python3.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4, 2021-02-18T16:58:48,364 from jcvi/assembly/chic.c:610: 2021-02-18T16:58:48,365 /usr/local/lib/python3.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2021-02-18T16:58:48,365 #warning "Using deprecated NumPy API, disable it with " \ 2021-02-18T16:58:48,365 ^~~~~~~ 2021-02-18T16:58:52,018 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.7/jcvi/assembly/chic.o -o build/lib.linux-armv7l-3.7/jcvi/assembly/chic.cpython-37m-arm-linux-gnueabihf.so 2021-02-18T16:58:52,172 building 'jcvi.formats.cblast' extension 2021-02-18T16:58:52,173 creating build/temp.linux-armv7l-3.7/jcvi/formats 2021-02-18T16:58:52,173 arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.7m -c jcvi/formats/cblast.c -o build/temp.linux-armv7l-3.7/jcvi/formats/cblast.o -O3 2021-02-18T16:58:59,138 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.7/jcvi/formats/cblast.o -o build/lib.linux-armv7l-3.7/jcvi/formats/cblast.cpython-37m-arm-linux-gnueabihf.so 2021-02-18T16:58:59,300 installing to build/bdist.linux-armv7l/wheel 2021-02-18T16:58:59,301 running install 2021-02-18T16:58:59,302 running install_lib 2021-02-18T16:58:59,306 creating build/bdist.linux-armv7l 2021-02-18T16:58:59,307 creating build/bdist.linux-armv7l/wheel 2021-02-18T16:58:59,309 creating build/bdist.linux-armv7l/wheel/jcvi 2021-02-18T16:58:59,311 creating build/bdist.linux-armv7l/wheel/jcvi/annotation 2021-02-18T16:58:59,312 copying build/lib.linux-armv7l-3.7/jcvi/annotation/ahrd.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2021-02-18T16:58:59,316 copying build/lib.linux-armv7l-3.7/jcvi/annotation/qc.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2021-02-18T16:58:59,319 copying build/lib.linux-armv7l-3.7/jcvi/annotation/evm.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2021-02-18T16:58:59,322 copying build/lib.linux-armv7l-3.7/jcvi/annotation/reformat.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2021-02-18T16:58:59,325 copying build/lib.linux-armv7l-3.7/jcvi/annotation/train.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2021-02-18T16:58:59,328 copying build/lib.linux-armv7l-3.7/jcvi/annotation/pasa.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2021-02-18T16:58:59,331 copying build/lib.linux-armv7l-3.7/jcvi/annotation/depth.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2021-02-18T16:58:59,334 copying build/lib.linux-armv7l-3.7/jcvi/annotation/stats.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2021-02-18T16:58:59,336 copying build/lib.linux-armv7l-3.7/jcvi/annotation/maker.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2021-02-18T16:58:59,339 copying build/lib.linux-armv7l-3.7/jcvi/annotation/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2021-02-18T16:58:59,341 copying build/lib.linux-armv7l-3.7/jcvi/annotation/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2021-02-18T16:58:59,343 copying build/lib.linux-armv7l-3.7/jcvi/annotation/automaton.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2021-02-18T16:58:59,347 creating build/bdist.linux-armv7l/wheel/jcvi/compara 2021-02-18T16:58:59,348 copying build/lib.linux-armv7l-3.7/jcvi/compara/phylogeny.py -> build/bdist.linux-armv7l/wheel/jcvi/compara 2021-02-18T16:58:59,351 copying build/lib.linux-armv7l-3.7/jcvi/compara/fractionation.py -> build/bdist.linux-armv7l/wheel/jcvi/compara 2021-02-18T16:58:59,354 copying build/lib.linux-armv7l-3.7/jcvi/compara/quota.py -> build/bdist.linux-armv7l/wheel/jcvi/compara 2021-02-18T16:58:59,357 copying build/lib.linux-armv7l-3.7/jcvi/compara/synteny.py -> build/bdist.linux-armv7l/wheel/jcvi/compara 2021-02-18T16:58:59,361 copying build/lib.linux-armv7l-3.7/jcvi/compara/blastfilter.py -> build/bdist.linux-armv7l/wheel/jcvi/compara 2021-02-18T16:58:59,364 copying build/lib.linux-armv7l-3.7/jcvi/compara/reconstruct.py -> build/bdist.linux-armv7l/wheel/jcvi/compara 2021-02-18T16:58:59,367 copying build/lib.linux-armv7l-3.7/jcvi/compara/synfind.py -> build/bdist.linux-armv7l/wheel/jcvi/compara 2021-02-18T16:58:59,369 copying build/lib.linux-armv7l-3.7/jcvi/compara/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/compara 2021-02-18T16:58:59,371 copying build/lib.linux-armv7l-3.7/jcvi/compara/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/compara 2021-02-18T16:58:59,373 copying build/lib.linux-armv7l-3.7/jcvi/compara/catalog.py -> build/bdist.linux-armv7l/wheel/jcvi/compara 2021-02-18T16:58:59,376 copying build/lib.linux-armv7l-3.7/jcvi/compara/pad.py -> build/bdist.linux-armv7l/wheel/jcvi/compara 2021-02-18T16:58:59,379 creating build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-02-18T16:58:59,380 copying build/lib.linux-armv7l-3.7/jcvi/graphics/histogram.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-02-18T16:58:59,383 copying build/lib.linux-armv7l-3.7/jcvi/graphics/chromosome.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-02-18T16:58:59,386 copying build/lib.linux-armv7l-3.7/jcvi/graphics/wheel.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-02-18T16:58:59,388 copying build/lib.linux-armv7l-3.7/jcvi/graphics/blastplot.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-02-18T16:58:59,391 copying build/lib.linux-armv7l-3.7/jcvi/graphics/align.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-02-18T16:58:59,394 copying build/lib.linux-armv7l-3.7/jcvi/graphics/heatmap.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-02-18T16:58:59,396 copying build/lib.linux-armv7l-3.7/jcvi/graphics/base.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-02-18T16:58:59,399 copying build/lib.linux-armv7l-3.7/jcvi/graphics/glyph.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-02-18T16:58:59,402 copying build/lib.linux-armv7l-3.7/jcvi/graphics/table.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-02-18T16:58:59,404 copying build/lib.linux-armv7l-3.7/jcvi/graphics/mummerplot.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-02-18T16:58:59,407 copying build/lib.linux-armv7l-3.7/jcvi/graphics/coverage.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-02-18T16:58:59,410 copying build/lib.linux-armv7l-3.7/jcvi/graphics/tree.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-02-18T16:58:59,413 copying build/lib.linux-armv7l-3.7/jcvi/graphics/synteny.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-02-18T16:58:59,416 copying build/lib.linux-armv7l-3.7/jcvi/graphics/graph.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-02-18T16:58:59,418 copying build/lib.linux-armv7l-3.7/jcvi/graphics/assembly.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-02-18T16:58:59,421 copying build/lib.linux-armv7l-3.7/jcvi/graphics/logo.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-02-18T16:58:59,424 copying build/lib.linux-armv7l-3.7/jcvi/graphics/landscape.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-02-18T16:58:59,427 copying build/lib.linux-armv7l-3.7/jcvi/graphics/grabseeds.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-02-18T16:58:59,430 copying build/lib.linux-armv7l-3.7/jcvi/graphics/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-02-18T16:58:59,432 copying build/lib.linux-armv7l-3.7/jcvi/graphics/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-02-18T16:58:59,434 copying build/lib.linux-armv7l-3.7/jcvi/graphics/dotplot.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-02-18T16:58:59,437 copying build/lib.linux-armv7l-3.7/jcvi/graphics/whisker.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-02-18T16:58:59,439 copying build/lib.linux-armv7l-3.7/jcvi/graphics/karyotype.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-02-18T16:58:59,443 creating build/bdist.linux-armv7l/wheel/jcvi/projects 2021-02-18T16:58:59,444 copying build/lib.linux-armv7l-3.7/jcvi/projects/bites.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-02-18T16:58:59,447 copying build/lib.linux-armv7l-3.7/jcvi/projects/str.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-02-18T16:58:59,452 copying build/lib.linux-armv7l-3.7/jcvi/projects/vanilla.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-02-18T16:58:59,455 copying build/lib.linux-armv7l-3.7/jcvi/projects/tgbs.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-02-18T16:58:59,459 copying build/lib.linux-armv7l-3.7/jcvi/projects/ies.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-02-18T16:58:59,462 copying build/lib.linux-armv7l-3.7/jcvi/projects/alfalfa.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-02-18T16:58:59,465 copying build/lib.linux-armv7l-3.7/jcvi/projects/age.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-02-18T16:58:59,469 copying build/lib.linux-armv7l-3.7/jcvi/projects/sugarcane.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-02-18T16:58:59,472 copying build/lib.linux-armv7l-3.7/jcvi/projects/napus.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-02-18T16:58:59,476 copying build/lib.linux-armv7l-3.7/jcvi/projects/allmaps.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-02-18T16:58:59,479 copying build/lib.linux-armv7l-3.7/jcvi/projects/pineapple.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-02-18T16:58:59,482 copying build/lib.linux-armv7l-3.7/jcvi/projects/heterosis.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-02-18T16:58:59,485 copying build/lib.linux-armv7l-3.7/jcvi/projects/synfind.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-02-18T16:58:59,488 copying build/lib.linux-armv7l-3.7/jcvi/projects/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-02-18T16:58:59,491 copying build/lib.linux-armv7l-3.7/jcvi/projects/misc.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-02-18T16:58:59,494 copying build/lib.linux-armv7l-3.7/jcvi/projects/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-02-18T16:58:59,497 copying build/lib.linux-armv7l-3.7/jcvi/projects/pistachio.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-02-18T16:58:59,501 creating build/bdist.linux-armv7l/wheel/jcvi/apps 2021-02-18T16:58:59,502 copying build/lib.linux-armv7l-3.7/jcvi/apps/blastplus.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-02-18T16:58:59,505 copying build/lib.linux-armv7l-3.7/jcvi/apps/r.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-02-18T16:58:59,508 copying build/lib.linux-armv7l-3.7/jcvi/apps/restriction.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-02-18T16:58:59,511 copying build/lib.linux-armv7l-3.7/jcvi/apps/align.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-02-18T16:58:59,515 copying build/lib.linux-armv7l-3.7/jcvi/apps/emboss.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-02-18T16:58:59,517 copying build/lib.linux-armv7l-3.7/jcvi/apps/base.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-02-18T16:58:59,523 copying build/lib.linux-armv7l-3.7/jcvi/apps/uclust.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-02-18T16:58:59,528 copying build/lib.linux-armv7l-3.7/jcvi/apps/bwa.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-02-18T16:58:59,531 copying build/lib.linux-armv7l-3.7/jcvi/apps/grid.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-02-18T16:58:59,534 copying build/lib.linux-armv7l-3.7/jcvi/apps/gmap.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-02-18T16:58:59,537 copying build/lib.linux-armv7l-3.7/jcvi/apps/bowtie.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-02-18T16:58:59,540 copying build/lib.linux-armv7l-3.7/jcvi/apps/cap3.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-02-18T16:58:59,543 copying build/lib.linux-armv7l-3.7/jcvi/apps/biomart.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-02-18T16:58:59,546 copying build/lib.linux-armv7l-3.7/jcvi/apps/script.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-02-18T16:58:59,549 copying build/lib.linux-armv7l-3.7/jcvi/apps/lastz.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-02-18T16:58:59,553 copying build/lib.linux-armv7l-3.7/jcvi/apps/phylo.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-02-18T16:58:59,557 copying build/lib.linux-armv7l-3.7/jcvi/apps/vecscreen.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-02-18T16:58:59,560 copying build/lib.linux-armv7l-3.7/jcvi/apps/cdhit.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-02-18T16:58:59,563 copying build/lib.linux-armv7l-3.7/jcvi/apps/ks.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-02-18T16:58:59,567 copying build/lib.linux-armv7l-3.7/jcvi/apps/mask.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-02-18T16:58:59,570 copying build/lib.linux-armv7l-3.7/jcvi/apps/gbsubmit.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-02-18T16:58:59,574 copying build/lib.linux-armv7l-3.7/jcvi/apps/uniprot.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-02-18T16:58:59,577 copying build/lib.linux-armv7l-3.7/jcvi/apps/softlink.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-02-18T16:58:59,580 copying build/lib.linux-armv7l-3.7/jcvi/apps/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-02-18T16:58:59,582 copying build/lib.linux-armv7l-3.7/jcvi/apps/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-02-18T16:58:59,585 copying build/lib.linux-armv7l-3.7/jcvi/apps/fetch.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-02-18T16:58:59,590 creating build/bdist.linux-armv7l/wheel/jcvi/utils 2021-02-18T16:58:59,591 copying build/lib.linux-armv7l-3.7/jcvi/utils/cbook.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-02-18T16:58:59,601 copying build/lib.linux-armv7l-3.7/jcvi/utils/taxonomy.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-02-18T16:58:59,605 creating build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-02-18T16:58:59,606 copying build/lib.linux-armv7l-3.7/jcvi/utils/data/blosum80.mat -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-02-18T16:58:59,610 copying build/lib.linux-armv7l-3.7/jcvi/utils/data/hg38.band.txt -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-02-18T16:58:59,616 copying build/lib.linux-armv7l-3.7/jcvi/utils/data/colorchecker.txt -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-02-18T16:58:59,619 copying build/lib.linux-armv7l-3.7/jcvi/utils/data/Humor-Sans.ttf -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-02-18T16:58:59,623 copying build/lib.linux-armv7l-3.7/jcvi/utils/data/HookedUp.ttf -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-02-18T16:58:59,627 copying build/lib.linux-armv7l-3.7/jcvi/utils/data/TREDs.meta.csv -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-02-18T16:58:59,631 copying build/lib.linux-armv7l-3.7/jcvi/utils/data/chrY.hg38.unique_ccn.gc -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-02-18T16:58:59,634 copying build/lib.linux-armv7l-3.7/jcvi/utils/data/hg38.chrom.sizes -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-02-18T16:58:59,636 copying build/lib.linux-armv7l-3.7/jcvi/utils/data/Airswing.ttf -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-02-18T16:58:59,639 copying build/lib.linux-armv7l-3.7/jcvi/utils/data/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-02-18T16:58:59,641 copying build/lib.linux-armv7l-3.7/jcvi/utils/data/Collegia.ttf -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-02-18T16:58:59,646 copying build/lib.linux-armv7l-3.7/jcvi/utils/data/adapters.fasta -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-02-18T16:58:59,649 copying build/lib.linux-armv7l-3.7/jcvi/utils/data/instance.json -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-02-18T16:58:59,651 copying build/lib.linux-armv7l-3.7/jcvi/utils/webcolors.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-02-18T16:58:59,654 copying build/lib.linux-armv7l-3.7/jcvi/utils/console.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-02-18T16:58:59,657 copying build/lib.linux-armv7l-3.7/jcvi/utils/aws.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-02-18T16:58:59,660 copying build/lib.linux-armv7l-3.7/jcvi/utils/table.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-02-18T16:58:59,663 copying build/lib.linux-armv7l-3.7/jcvi/utils/ez_setup.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-02-18T16:58:59,666 copying build/lib.linux-armv7l-3.7/jcvi/utils/range.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-02-18T16:58:59,669 copying build/lib.linux-armv7l-3.7/jcvi/utils/db.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-02-18T16:58:59,672 copying build/lib.linux-armv7l-3.7/jcvi/utils/grouper.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-02-18T16:58:59,675 copying build/lib.linux-armv7l-3.7/jcvi/utils/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-02-18T16:58:59,677 copying build/lib.linux-armv7l-3.7/jcvi/utils/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-02-18T16:58:59,679 copying build/lib.linux-armv7l-3.7/jcvi/utils/orderedcollections.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-02-18T16:58:59,683 creating build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-02-18T16:58:59,684 copying build/lib.linux-armv7l-3.7/jcvi/assembly/postprocess.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-02-18T16:58:59,688 copying build/lib.linux-armv7l-3.7/jcvi/assembly/syntenypath.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-02-18T16:58:59,691 copying build/lib.linux-armv7l-3.7/jcvi/assembly/hic.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-02-18T16:58:59,695 copying build/lib.linux-armv7l-3.7/jcvi/assembly/meraculous.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-02-18T16:58:59,698 copying build/lib.linux-armv7l-3.7/jcvi/assembly/base.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-02-18T16:58:59,701 copying build/lib.linux-armv7l-3.7/jcvi/assembly/chic.pyx -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-02-18T16:58:59,704 copying build/lib.linux-armv7l-3.7/jcvi/assembly/amos.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-02-18T16:58:59,706 copying build/lib.linux-armv7l-3.7/jcvi/assembly/coverage.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-02-18T16:58:59,709 copying build/lib.linux-armv7l-3.7/jcvi/assembly/soap.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-02-18T16:58:59,712 copying build/lib.linux-armv7l-3.7/jcvi/assembly/geneticmap.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-02-18T16:58:59,716 copying build/lib.linux-armv7l-3.7/jcvi/assembly/allpaths.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-02-18T16:58:59,719 copying build/lib.linux-armv7l-3.7/jcvi/assembly/pbjelly.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-02-18T16:58:59,722 copying build/lib.linux-armv7l-3.7/jcvi/assembly/chic.cpython-37m-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-02-18T16:58:59,731 copying build/lib.linux-armv7l-3.7/jcvi/assembly/gaps.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-02-18T16:58:59,734 copying build/lib.linux-armv7l-3.7/jcvi/assembly/sim.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-02-18T16:58:59,737 copying build/lib.linux-armv7l-3.7/jcvi/assembly/allmaps.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-02-18T16:58:59,741 copying build/lib.linux-armv7l-3.7/jcvi/assembly/patch.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-02-18T16:58:59,745 copying build/lib.linux-armv7l-3.7/jcvi/assembly/bambus.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-02-18T16:58:59,747 copying build/lib.linux-armv7l-3.7/jcvi/assembly/opticalmap.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-02-18T16:58:59,750 copying build/lib.linux-armv7l-3.7/jcvi/assembly/trinity.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-02-18T16:58:59,753 copying build/lib.linux-armv7l-3.7/jcvi/assembly/unitig.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-02-18T16:58:59,756 copying build/lib.linux-armv7l-3.7/jcvi/assembly/preprocess.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-02-18T16:58:59,759 copying build/lib.linux-armv7l-3.7/jcvi/assembly/goldenpath.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-02-18T16:58:59,763 copying build/lib.linux-armv7l-3.7/jcvi/assembly/sspace.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-02-18T16:58:59,767 copying build/lib.linux-armv7l-3.7/jcvi/assembly/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-02-18T16:58:59,769 copying build/lib.linux-armv7l-3.7/jcvi/assembly/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-02-18T16:58:59,772 copying build/lib.linux-armv7l-3.7/jcvi/assembly/ca.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-02-18T16:58:59,776 copying build/lib.linux-armv7l-3.7/jcvi/assembly/automaton.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-02-18T16:58:59,779 copying build/lib.linux-armv7l-3.7/jcvi/assembly/kmer.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-02-18T16:58:59,785 creating build/bdist.linux-armv7l/wheel/jcvi/formats 2021-02-18T16:58:59,786 copying build/lib.linux-armv7l-3.7/jcvi/formats/maf.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-02-18T16:58:59,790 copying build/lib.linux-armv7l-3.7/jcvi/formats/fpc.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-02-18T16:58:59,792 copying build/lib.linux-armv7l-3.7/jcvi/formats/bed.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-02-18T16:58:59,798 copying build/lib.linux-armv7l-3.7/jcvi/formats/posmap.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-02-18T16:58:59,801 copying build/lib.linux-armv7l-3.7/jcvi/formats/blast.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-02-18T16:58:59,805 copying build/lib.linux-armv7l-3.7/jcvi/formats/cblast.cpython-37m-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-02-18T16:58:59,822 copying build/lib.linux-armv7l-3.7/jcvi/formats/psl.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-02-18T16:58:59,825 copying build/lib.linux-armv7l-3.7/jcvi/formats/chain.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-02-18T16:58:59,828 copying build/lib.linux-armv7l-3.7/jcvi/formats/pdf.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-02-18T16:58:59,831 copying build/lib.linux-armv7l-3.7/jcvi/formats/base.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-02-18T16:58:59,835 copying build/lib.linux-armv7l-3.7/jcvi/formats/gff.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-02-18T16:58:59,842 copying build/lib.linux-armv7l-3.7/jcvi/formats/obo.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-02-18T16:58:59,845 copying build/lib.linux-armv7l-3.7/jcvi/formats/genbank.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-02-18T16:58:59,848 copying build/lib.linux-armv7l-3.7/jcvi/formats/sbt.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-02-18T16:58:59,851 copying build/lib.linux-armv7l-3.7/jcvi/formats/agp.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-02-18T16:58:59,856 copying build/lib.linux-armv7l-3.7/jcvi/formats/ace.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-02-18T16:58:59,859 copying build/lib.linux-armv7l-3.7/jcvi/formats/paf.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-02-18T16:58:59,862 copying build/lib.linux-armv7l-3.7/jcvi/formats/fastq.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-02-18T16:58:59,866 copying build/lib.linux-armv7l-3.7/jcvi/formats/contig.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-02-18T16:58:59,869 copying build/lib.linux-armv7l-3.7/jcvi/formats/coords.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-02-18T16:58:59,873 copying build/lib.linux-armv7l-3.7/jcvi/formats/excel.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-02-18T16:58:59,876 copying build/lib.linux-armv7l-3.7/jcvi/formats/btab.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-02-18T16:58:59,879 copying build/lib.linux-armv7l-3.7/jcvi/formats/html.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-02-18T16:58:59,881 copying build/lib.linux-armv7l-3.7/jcvi/formats/cblast.pyx -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-02-18T16:58:59,884 copying build/lib.linux-armv7l-3.7/jcvi/formats/vcf.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-02-18T16:58:59,888 copying build/lib.linux-armv7l-3.7/jcvi/formats/sizes.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-02-18T16:58:59,891 copying build/lib.linux-armv7l-3.7/jcvi/formats/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-02-18T16:58:59,894 copying build/lib.linux-armv7l-3.7/jcvi/formats/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-02-18T16:58:59,896 copying build/lib.linux-armv7l-3.7/jcvi/formats/sam.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-02-18T16:58:59,900 copying build/lib.linux-armv7l-3.7/jcvi/formats/cdt.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-02-18T16:58:59,903 copying build/lib.linux-armv7l-3.7/jcvi/formats/pyblast.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-02-18T16:58:59,906 copying build/lib.linux-armv7l-3.7/jcvi/formats/fasta.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-02-18T16:58:59,912 copying build/lib.linux-armv7l-3.7/jcvi/_version.py -> build/bdist.linux-armv7l/wheel/jcvi 2021-02-18T16:58:59,916 creating build/bdist.linux-armv7l/wheel/jcvi/algorithms 2021-02-18T16:58:59,917 copying build/lib.linux-armv7l-3.7/jcvi/algorithms/supermap.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2021-02-18T16:58:59,921 copying build/lib.linux-armv7l-3.7/jcvi/algorithms/ec.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2021-02-18T16:58:59,925 copying build/lib.linux-armv7l-3.7/jcvi/algorithms/formula.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2021-02-18T16:58:59,928 copying build/lib.linux-armv7l-3.7/jcvi/algorithms/tsp.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2021-02-18T16:58:59,931 copying build/lib.linux-armv7l-3.7/jcvi/algorithms/lis.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2021-02-18T16:58:59,936 copying build/lib.linux-armv7l-3.7/jcvi/algorithms/lpsolve.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2021-02-18T16:58:59,940 copying build/lib.linux-armv7l-3.7/jcvi/algorithms/graph.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2021-02-18T16:58:59,944 copying build/lib.linux-armv7l-3.7/jcvi/algorithms/maxsum.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2021-02-18T16:58:59,947 copying build/lib.linux-armv7l-3.7/jcvi/algorithms/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2021-02-18T16:58:59,949 copying build/lib.linux-armv7l-3.7/jcvi/algorithms/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2021-02-18T16:58:59,952 copying build/lib.linux-armv7l-3.7/jcvi/algorithms/ml.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2021-02-18T16:58:59,955 copying build/lib.linux-armv7l-3.7/jcvi/algorithms/matrix.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2021-02-18T16:58:59,958 copying build/lib.linux-armv7l-3.7/jcvi/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi 2021-02-18T16:58:59,961 creating build/bdist.linux-armv7l/wheel/jcvi/variation 2021-02-18T16:58:59,963 copying build/lib.linux-armv7l-3.7/jcvi/variation/tassel.py -> build/bdist.linux-armv7l/wheel/jcvi/variation 2021-02-18T16:58:59,966 copying build/lib.linux-armv7l-3.7/jcvi/variation/str.py -> build/bdist.linux-armv7l/wheel/jcvi/variation 2021-02-18T16:58:59,970 copying build/lib.linux-armv7l-3.7/jcvi/variation/delly.py -> build/bdist.linux-armv7l/wheel/jcvi/variation 2021-02-18T16:58:59,974 copying build/lib.linux-armv7l-3.7/jcvi/variation/cnv.py -> build/bdist.linux-armv7l/wheel/jcvi/variation 2021-02-18T16:58:59,978 copying build/lib.linux-armv7l-3.7/jcvi/variation/deconvolute.py -> build/bdist.linux-armv7l/wheel/jcvi/variation 2021-02-18T16:58:59,981 copying build/lib.linux-armv7l-3.7/jcvi/variation/phase.py -> build/bdist.linux-armv7l/wheel/jcvi/variation 2021-02-18T16:58:59,983 copying build/lib.linux-armv7l-3.7/jcvi/variation/snp.py -> build/bdist.linux-armv7l/wheel/jcvi/variation 2021-02-18T16:58:59,987 copying build/lib.linux-armv7l-3.7/jcvi/variation/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/variation 2021-02-18T16:58:59,989 copying build/lib.linux-armv7l-3.7/jcvi/variation/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/variation 2021-02-18T16:58:59,992 copying build/lib.linux-armv7l-3.7/jcvi/variation/impute.py -> build/bdist.linux-armv7l/wheel/jcvi/variation 2021-02-18T16:58:59,995 running install_egg_info 2021-02-18T16:59:00,005 Copying jcvi.egg-info to build/bdist.linux-armv7l/wheel/jcvi-1.1.8-py3.7.egg-info 2021-02-18T16:59:00,022 running install_scripts 2021-02-18T16:59:00,098 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2021-02-18T16:59:00,106 creating build/bdist.linux-armv7l/wheel/jcvi-1.1.8.dist-info/WHEEL 2021-02-18T16:59:00,109 creating '/tmp/pip-wheel-jb_qo824/jcvi-1.1.8-cp37-cp37m-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2021-02-18T16:59:00,113 adding 'jcvi/__init__.py' 2021-02-18T16:59:00,114 adding 'jcvi/_version.py' 2021-02-18T16:59:00,117 adding 'jcvi/algorithms/__init__.py' 2021-02-18T16:59:00,119 adding 'jcvi/algorithms/__main__.py' 2021-02-18T16:59:00,121 adding 'jcvi/algorithms/ec.py' 2021-02-18T16:59:00,123 adding 'jcvi/algorithms/formula.py' 2021-02-18T16:59:00,126 adding 'jcvi/algorithms/graph.py' 2021-02-18T16:59:00,128 adding 'jcvi/algorithms/lis.py' 2021-02-18T16:59:00,133 adding 'jcvi/algorithms/lpsolve.py' 2021-02-18T16:59:00,135 adding 'jcvi/algorithms/matrix.py' 2021-02-18T16:59:00,137 adding 'jcvi/algorithms/maxsum.py' 2021-02-18T16:59:00,139 adding 'jcvi/algorithms/ml.py' 2021-02-18T16:59:00,141 adding 'jcvi/algorithms/supermap.py' 2021-02-18T16:59:00,143 adding 'jcvi/algorithms/tsp.py' 2021-02-18T16:59:00,146 adding 'jcvi/annotation/__init__.py' 2021-02-18T16:59:00,148 adding 'jcvi/annotation/__main__.py' 2021-02-18T16:59:00,151 adding 'jcvi/annotation/ahrd.py' 2021-02-18T16:59:00,153 adding 'jcvi/annotation/automaton.py' 2021-02-18T16:59:00,156 adding 'jcvi/annotation/depth.py' 2021-02-18T16:59:00,158 adding 'jcvi/annotation/evm.py' 2021-02-18T16:59:00,161 adding 'jcvi/annotation/maker.py' 2021-02-18T16:59:00,164 adding 'jcvi/annotation/pasa.py' 2021-02-18T16:59:00,167 adding 'jcvi/annotation/qc.py' 2021-02-18T16:59:00,173 adding 'jcvi/annotation/reformat.py' 2021-02-18T16:59:00,176 adding 'jcvi/annotation/stats.py' 2021-02-18T16:59:00,178 adding 'jcvi/annotation/train.py' 2021-02-18T16:59:00,181 adding 'jcvi/apps/__init__.py' 2021-02-18T16:59:00,183 adding 'jcvi/apps/__main__.py' 2021-02-18T16:59:00,185 adding 'jcvi/apps/align.py' 2021-02-18T16:59:00,195 adding 'jcvi/apps/base.py' 2021-02-18T16:59:00,198 adding 'jcvi/apps/biomart.py' 2021-02-18T16:59:00,200 adding 'jcvi/apps/blastplus.py' 2021-02-18T16:59:00,202 adding 'jcvi/apps/bowtie.py' 2021-02-18T16:59:00,204 adding 'jcvi/apps/bwa.py' 2021-02-18T16:59:00,207 adding 'jcvi/apps/cap3.py' 2021-02-18T16:59:00,209 adding 'jcvi/apps/cdhit.py' 2021-02-18T16:59:00,211 adding 'jcvi/apps/emboss.py' 2021-02-18T16:59:00,214 adding 'jcvi/apps/fetch.py' 2021-02-18T16:59:00,218 adding 'jcvi/apps/gbsubmit.py' 2021-02-18T16:59:00,220 adding 'jcvi/apps/gmap.py' 2021-02-18T16:59:00,223 adding 'jcvi/apps/grid.py' 2021-02-18T16:59:00,228 adding 'jcvi/apps/ks.py' 2021-02-18T16:59:00,231 adding 'jcvi/apps/lastz.py' 2021-02-18T16:59:00,233 adding 'jcvi/apps/mask.py' 2021-02-18T16:59:00,238 adding 'jcvi/apps/phylo.py' 2021-02-18T16:59:00,240 adding 'jcvi/apps/r.py' 2021-02-18T16:59:00,242 adding 'jcvi/apps/restriction.py' 2021-02-18T16:59:00,244 adding 'jcvi/apps/script.py' 2021-02-18T16:59:00,246 adding 'jcvi/apps/softlink.py' 2021-02-18T16:59:00,251 adding 'jcvi/apps/uclust.py' 2021-02-18T16:59:00,253 adding 'jcvi/apps/uniprot.py' 2021-02-18T16:59:00,255 adding 'jcvi/apps/vecscreen.py' 2021-02-18T16:59:00,258 adding 'jcvi/assembly/__init__.py' 2021-02-18T16:59:00,260 adding 'jcvi/assembly/__main__.py' 2021-02-18T16:59:00,270 adding 'jcvi/assembly/allmaps.py' 2021-02-18T16:59:00,274 adding 'jcvi/assembly/allpaths.py' 2021-02-18T16:59:00,276 adding 'jcvi/assembly/amos.py' 2021-02-18T16:59:00,279 adding 'jcvi/assembly/automaton.py' 2021-02-18T16:59:00,281 adding 'jcvi/assembly/bambus.py' 2021-02-18T16:59:00,283 adding 'jcvi/assembly/base.py' 2021-02-18T16:59:00,288 adding 'jcvi/assembly/ca.py' 2021-02-18T16:59:00,336 adding 'jcvi/assembly/chic.cpython-37m-arm-linux-gnueabihf.so' 2021-02-18T16:59:00,340 adding 'jcvi/assembly/chic.pyx' 2021-02-18T16:59:00,342 adding 'jcvi/assembly/coverage.py' 2021-02-18T16:59:00,344 adding 'jcvi/assembly/gaps.py' 2021-02-18T16:59:00,348 adding 'jcvi/assembly/geneticmap.py' 2021-02-18T16:59:00,353 adding 'jcvi/assembly/goldenpath.py' 2021-02-18T16:59:00,362 adding 'jcvi/assembly/hic.py' 2021-02-18T16:59:00,369 adding 'jcvi/assembly/kmer.py' 2021-02-18T16:59:00,371 adding 'jcvi/assembly/meraculous.py' 2021-02-18T16:59:00,373 adding 'jcvi/assembly/opticalmap.py' 2021-02-18T16:59:00,378 adding 'jcvi/assembly/patch.py' 2021-02-18T16:59:00,381 adding 'jcvi/assembly/pbjelly.py' 2021-02-18T16:59:00,384 adding 'jcvi/assembly/postprocess.py' 2021-02-18T16:59:00,387 adding 'jcvi/assembly/preprocess.py' 2021-02-18T16:59:00,390 adding 'jcvi/assembly/sim.py' 2021-02-18T16:59:00,392 adding 'jcvi/assembly/soap.py' 2021-02-18T16:59:00,395 adding 'jcvi/assembly/sspace.py' 2021-02-18T16:59:00,398 adding 'jcvi/assembly/syntenypath.py' 2021-02-18T16:59:00,400 adding 'jcvi/assembly/trinity.py' 2021-02-18T16:59:00,403 adding 'jcvi/assembly/unitig.py' 2021-02-18T16:59:00,405 adding 'jcvi/compara/__init__.py' 2021-02-18T16:59:00,407 adding 'jcvi/compara/__main__.py' 2021-02-18T16:59:00,409 adding 'jcvi/compara/blastfilter.py' 2021-02-18T16:59:00,414 adding 'jcvi/compara/catalog.py' 2021-02-18T16:59:00,418 adding 'jcvi/compara/fractionation.py' 2021-02-18T16:59:00,421 adding 'jcvi/compara/pad.py' 2021-02-18T16:59:00,423 adding 'jcvi/compara/phylogeny.py' 2021-02-18T16:59:00,425 adding 'jcvi/compara/quota.py' 2021-02-18T16:59:00,428 adding 'jcvi/compara/reconstruct.py' 2021-02-18T16:59:00,430 adding 'jcvi/compara/synfind.py' 2021-02-18T16:59:00,439 adding 'jcvi/compara/synteny.py' 2021-02-18T16:59:00,443 adding 'jcvi/formats/__init__.py' 2021-02-18T16:59:00,444 adding 'jcvi/formats/__main__.py' 2021-02-18T16:59:00,446 adding 'jcvi/formats/ace.py' 2021-02-18T16:59:00,454 adding 'jcvi/formats/agp.py' 2021-02-18T16:59:00,460 adding 'jcvi/formats/base.py' 2021-02-18T16:59:00,471 adding 'jcvi/formats/bed.py' 2021-02-18T16:59:00,478 adding 'jcvi/formats/blast.py' 2021-02-18T16:59:00,480 adding 'jcvi/formats/btab.py' 2021-02-18T16:59:00,584 adding 'jcvi/formats/cblast.cpython-37m-arm-linux-gnueabihf.so' 2021-02-18T16:59:00,591 adding 'jcvi/formats/cblast.pyx' 2021-02-18T16:59:00,592 adding 'jcvi/formats/cdt.py' 2021-02-18T16:59:00,595 adding 'jcvi/formats/chain.py' 2021-02-18T16:59:00,597 adding 'jcvi/formats/contig.py' 2021-02-18T16:59:00,599 adding 'jcvi/formats/coords.py' 2021-02-18T16:59:00,602 adding 'jcvi/formats/excel.py' 2021-02-18T16:59:00,613 adding 'jcvi/formats/fasta.py' 2021-02-18T16:59:00,618 adding 'jcvi/formats/fastq.py' 2021-02-18T16:59:00,620 adding 'jcvi/formats/fpc.py' 2021-02-18T16:59:00,623 adding 'jcvi/formats/genbank.py' 2021-02-18T16:59:00,638 adding 'jcvi/formats/gff.py' 2021-02-18T16:59:00,640 adding 'jcvi/formats/html.py' 2021-02-18T16:59:00,642 adding 'jcvi/formats/maf.py' 2021-02-18T16:59:00,644 adding 'jcvi/formats/obo.py' 2021-02-18T16:59:00,646 adding 'jcvi/formats/paf.py' 2021-02-18T16:59:00,648 adding 'jcvi/formats/pdf.py' 2021-02-18T16:59:00,650 adding 'jcvi/formats/posmap.py' 2021-02-18T16:59:00,652 adding 'jcvi/formats/psl.py' 2021-02-18T16:59:00,654 adding 'jcvi/formats/pyblast.py' 2021-02-18T16:59:00,658 adding 'jcvi/formats/sam.py' 2021-02-18T16:59:00,661 adding 'jcvi/formats/sbt.py' 2021-02-18T16:59:00,663 adding 'jcvi/formats/sizes.py' 2021-02-18T16:59:00,667 adding 'jcvi/formats/vcf.py' 2021-02-18T16:59:00,670 adding 'jcvi/graphics/__init__.py' 2021-02-18T16:59:00,672 adding 'jcvi/graphics/__main__.py' 2021-02-18T16:59:00,675 adding 'jcvi/graphics/align.py' 2021-02-18T16:59:00,678 adding 'jcvi/graphics/assembly.py' 2021-02-18T16:59:00,681 adding 'jcvi/graphics/base.py' 2021-02-18T16:59:00,684 adding 'jcvi/graphics/blastplot.py' 2021-02-18T16:59:00,688 adding 'jcvi/graphics/chromosome.py' 2021-02-18T16:59:00,690 adding 'jcvi/graphics/coverage.py' 2021-02-18T16:59:00,693 adding 'jcvi/graphics/dotplot.py' 2021-02-18T16:59:00,697 adding 'jcvi/graphics/glyph.py' 2021-02-18T16:59:00,701 adding 'jcvi/graphics/grabseeds.py' 2021-02-18T16:59:00,703 adding 'jcvi/graphics/graph.py' 2021-02-18T16:59:00,705 adding 'jcvi/graphics/heatmap.py' 2021-02-18T16:59:00,707 adding 'jcvi/graphics/histogram.py' 2021-02-18T16:59:00,710 adding 'jcvi/graphics/karyotype.py' 2021-02-18T16:59:00,714 adding 'jcvi/graphics/landscape.py' 2021-02-18T16:59:00,716 adding 'jcvi/graphics/logo.py' 2021-02-18T16:59:00,717 adding 'jcvi/graphics/mummerplot.py' 2021-02-18T16:59:00,720 adding 'jcvi/graphics/synteny.py' 2021-02-18T16:59:00,722 adding 'jcvi/graphics/table.py' 2021-02-18T16:59:00,726 adding 'jcvi/graphics/tree.py' 2021-02-18T16:59:00,728 adding 'jcvi/graphics/wheel.py' 2021-02-18T16:59:00,730 adding 'jcvi/graphics/whisker.py' 2021-02-18T16:59:00,732 adding 'jcvi/projects/__init__.py' 2021-02-18T16:59:00,733 adding 'jcvi/projects/__main__.py' 2021-02-18T16:59:00,737 adding 'jcvi/projects/age.py' 2021-02-18T16:59:00,739 adding 'jcvi/projects/alfalfa.py' 2021-02-18T16:59:00,742 adding 'jcvi/projects/allmaps.py' 2021-02-18T16:59:00,744 adding 'jcvi/projects/bites.py' 2021-02-18T16:59:00,745 adding 'jcvi/projects/heterosis.py' 2021-02-18T16:59:00,748 adding 'jcvi/projects/ies.py' 2021-02-18T16:59:00,751 adding 'jcvi/projects/misc.py' 2021-02-18T16:59:00,754 adding 'jcvi/projects/napus.py' 2021-02-18T16:59:00,757 adding 'jcvi/projects/pineapple.py' 2021-02-18T16:59:00,758 adding 'jcvi/projects/pistachio.py' 2021-02-18T16:59:00,766 adding 'jcvi/projects/str.py' 2021-02-18T16:59:00,769 adding 'jcvi/projects/sugarcane.py' 2021-02-18T16:59:00,773 adding 'jcvi/projects/synfind.py' 2021-02-18T16:59:00,776 adding 'jcvi/projects/tgbs.py' 2021-02-18T16:59:00,778 adding 'jcvi/projects/vanilla.py' 2021-02-18T16:59:00,780 adding 'jcvi/utils/__init__.py' 2021-02-18T16:59:00,782 adding 'jcvi/utils/__main__.py' 2021-02-18T16:59:00,785 adding 'jcvi/utils/aws.py' 2021-02-18T16:59:00,787 adding 'jcvi/utils/cbook.py' 2021-02-18T16:59:00,788 adding 'jcvi/utils/console.py' 2021-02-18T16:59:00,790 adding 'jcvi/utils/db.py' 2021-02-18T16:59:00,792 adding 'jcvi/utils/ez_setup.py' 2021-02-18T16:59:00,793 adding 'jcvi/utils/grouper.py' 2021-02-18T16:59:00,795 adding 'jcvi/utils/orderedcollections.py' 2021-02-18T16:59:00,798 adding 'jcvi/utils/range.py' 2021-02-18T16:59:00,799 adding 'jcvi/utils/table.py' 2021-02-18T16:59:00,801 adding 'jcvi/utils/taxonomy.py' 2021-02-18T16:59:00,802 adding 'jcvi/utils/webcolors.py' 2021-02-18T16:59:00,805 adding 'jcvi/utils/data/Airswing.ttf' 2021-02-18T16:59:00,822 adding 'jcvi/utils/data/Collegia.ttf' 2021-02-18T16:59:00,827 adding 'jcvi/utils/data/HookedUp.ttf' 2021-02-18T16:59:00,833 adding 'jcvi/utils/data/Humor-Sans.ttf' 2021-02-18T16:59:00,836 adding 'jcvi/utils/data/TREDs.meta.csv' 2021-02-18T16:59:00,838 adding 'jcvi/utils/data/__init__.py' 2021-02-18T16:59:00,839 adding 'jcvi/utils/data/adapters.fasta' 2021-02-18T16:59:00,841 adding 'jcvi/utils/data/blosum80.mat' 2021-02-18T16:59:00,842 adding 'jcvi/utils/data/chrY.hg38.unique_ccn.gc' 2021-02-18T16:59:00,844 adding 'jcvi/utils/data/colorchecker.txt' 2021-02-18T16:59:00,849 adding 'jcvi/utils/data/hg38.band.txt' 2021-02-18T16:59:00,852 adding 'jcvi/utils/data/hg38.chrom.sizes' 2021-02-18T16:59:00,854 adding 'jcvi/utils/data/instance.json' 2021-02-18T16:59:00,856 adding 'jcvi/variation/__init__.py' 2021-02-18T16:59:00,857 adding 'jcvi/variation/__main__.py' 2021-02-18T16:59:00,862 adding 'jcvi/variation/cnv.py' 2021-02-18T16:59:00,864 adding 'jcvi/variation/deconvolute.py' 2021-02-18T16:59:00,866 adding 'jcvi/variation/delly.py' 2021-02-18T16:59:00,868 adding 'jcvi/variation/impute.py' 2021-02-18T16:59:00,870 adding 'jcvi/variation/phase.py' 2021-02-18T16:59:00,872 adding 'jcvi/variation/snp.py' 2021-02-18T16:59:00,878 adding 'jcvi/variation/str.py' 2021-02-18T16:59:00,880 adding 'jcvi/variation/tassel.py' 2021-02-18T16:59:00,883 adding 'jcvi-1.1.8.dist-info/LICENSE' 2021-02-18T16:59:00,884 adding 'jcvi-1.1.8.dist-info/METADATA' 2021-02-18T16:59:00,886 adding 'jcvi-1.1.8.dist-info/WHEEL' 2021-02-18T16:59:00,887 adding 'jcvi-1.1.8.dist-info/top_level.txt' 2021-02-18T16:59:00,889 adding 'jcvi-1.1.8.dist-info/RECORD' 2021-02-18T16:59:00,914 removing build/bdist.linux-armv7l/wheel 2021-02-18T16:59:01,246 Building wheel for jcvi (setup.py): finished with status 'done' 2021-02-18T16:59:01,263 Created wheel for jcvi: filename=jcvi-1.1.8-cp37-cp37m-linux_armv7l.whl size=1183560 sha256=c633d4eadd70713acfa1bf8590f0e0db9574b5d9a594d1733aa868ddf4c4f0fe 2021-02-18T16:59:01,264 Stored in directory: /tmp/pip-ephem-wheel-cache-vwvo2fcu/wheels/a4/a7/26/d53d93f05ac336a226285e17b438802f82c1c3fb502ae8e447 2021-02-18T16:59:01,283 Successfully built jcvi 2021-02-18T16:59:01,328 Removed build tracker: '/tmp/pip-req-tracker-pjkve2zj'