2021-03-17T21:13:44,322 Created temporary directory: /tmp/pip-ephem-wheel-cache-5hzak8ky 2021-03-17T21:13:44,325 Created temporary directory: /tmp/pip-req-tracker-4m47c21i 2021-03-17T21:13:44,325 Initialized build tracking at /tmp/pip-req-tracker-4m47c21i 2021-03-17T21:13:44,325 Created build tracker: /tmp/pip-req-tracker-4m47c21i 2021-03-17T21:13:44,325 Entered build tracker: /tmp/pip-req-tracker-4m47c21i 2021-03-17T21:13:44,326 Created temporary directory: /tmp/pip-wheel-2kfro51x 2021-03-17T21:13:44,360 1 location(s) to search for versions of pysb: 2021-03-17T21:13:44,360 * https://pypi.org/simple/pysb/ 2021-03-17T21:13:44,360 Fetching project page and analyzing links: https://pypi.org/simple/pysb/ 2021-03-17T21:13:44,361 Getting page https://pypi.org/simple/pysb/ 2021-03-17T21:13:44,362 Found index url https://pypi.org/simple 2021-03-17T21:13:44,467 Found link https://files.pythonhosted.org/packages/d0/95/38ec0bb8707d5914457261dc26509c2be7ae99f5816a40c5a15994f99b2a/pysb-0.1.3.tar.gz#sha256=c9d6cba3f8b45c93ffcc3f00a603fb450f5fc4a7486c8f25e5a2e250459cd2ff (from https://pypi.org/simple/pysb/), version: 0.1.3 2021-03-17T21:13:44,467 Found link https://files.pythonhosted.org/packages/dd/c6/3e5c8f0d7d6e48b0d6f4e84b0bfa910ad809ced993db7863e23626f0eb9a/pysb-0.1.4.tar.gz#sha256=0abf3e9b8c38868e4e1f3a4641e52ca5f81546144893efbccf0054b410968af9 (from https://pypi.org/simple/pysb/), version: 0.1.4 2021-03-17T21:13:44,468 Found link https://files.pythonhosted.org/packages/90/43/150ebafa3b881f53061326d043c1f8bbabd051f13b2beea8d54e79ff8f16/pysb-0.1.5.tar.gz#sha256=22a88c00ff1e17c3089079c0cc6edb8bce02550a57540e2ebdfd007037039c43 (from https://pypi.org/simple/pysb/), version: 0.1.5 2021-03-17T21:13:44,468 Found link https://files.pythonhosted.org/packages/ad/57/6ff9ac8b5efaf6517aae862597d8ca59c16430e3aed13780a477662175ba/pysb-0.1.6.tar.gz#sha256=f41185b0238e0dcf66fd6e565a921fdc82770b3f60e62209ede04e03fe592806 (from https://pypi.org/simple/pysb/), version: 0.1.6 2021-03-17T21:13:44,468 Found link https://files.pythonhosted.org/packages/97/47/d4096b6b84ff6666bab62b8bfb2f05e7a63684fb8917cee69e2963ae3c5d/pysb-0.1.7.tar.gz#sha256=9251f0da12d4761b2d8bceabbcdb2cc4763f06317f6222aa9720ba49d11441ee (from https://pypi.org/simple/pysb/), version: 0.1.7 2021-03-17T21:13:44,468 Found link https://files.pythonhosted.org/packages/83/2c/7b9f4ee2fc8d42a3f3eee88f3c3f27c2d78acd4caaecc736c6298cf9e477/pysb-0.1.8.tar.gz#sha256=7c98c437a05282dc7a0c66e6696a938d849cd32d2fac3c4938503997ebb346ee (from https://pypi.org/simple/pysb/), version: 0.1.8 2021-03-17T21:13:44,469 Found link https://files.pythonhosted.org/packages/69/77/3db9d2401466092097b4f66c1b5c643d7e38df6d32e49b19647c57168b61/pysb-0.1.9.tar.gz#sha256=89e8efda97a6decb1525fbf5445439510a0b01d1cd16e296662159abc5e3ca9b (from https://pypi.org/simple/pysb/), version: 0.1.9 2021-03-17T21:13:44,469 Found link https://files.pythonhosted.org/packages/2d/d4/043c122f4351366973bc0958a6bafb224bfd6df7d84622adda95b100bebe/pysb-0.1.10.tar.gz#sha256=44ec0c69acfd756f26e7de07eb890b964744b82ee8be6264a600dbf0aded33de (from https://pypi.org/simple/pysb/), version: 0.1.10 2021-03-17T21:13:44,469 Found link https://files.pythonhosted.org/packages/2b/ff/7faaf379a3721f7ee39faec94fc78c2406f825cc738ef8e60cbe3fe192cb/pysb-0.1.11.tar.gz#sha256=3af0a2d37d0dde81b2479c03e3d0cb6c4c0b439559c0ae2552e2507c044dc3fd (from https://pypi.org/simple/pysb/), version: 0.1.11 2021-03-17T21:13:44,470 Found link https://files.pythonhosted.org/packages/88/cc/1cf17b0c5c3e679b26b0cd7927c2d45e9272ee91a69b84125af1e57f0e18/pysb-1.0.0.tar.gz#sha256=6987a39e26227e7ac987995fa1bdd01f906e162ce8f8750499ae546c557e1214 (from https://pypi.org/simple/pysb/), version: 1.0.0 2021-03-17T21:13:44,470 Found link https://files.pythonhosted.org/packages/ce/52/2d372671a6b24c981d2c55efa2ad6e7ba2f7ad59317ae58b1a65b7596dfd/pysb-1.0.1.tar.gz#sha256=118d2c947b245f0c5b9f3e85a59bb4b613059325b6d5fb44ea1565b74a3b748f (from https://pypi.org/simple/pysb/), version: 1.0.1 2021-03-17T21:13:44,470 Found link https://files.pythonhosted.org/packages/16/c9/7bd74e99c3ddb317307c4871d974f252c5b5de339a09f47e53a9116bd9dc/pysb-1.1.0.tar.gz#sha256=3a0aaf81425318bb4e8ab01c6d2699f4e3fe730df4bd8c258772604cbdba3dcd (from https://pypi.org/simple/pysb/), version: 1.1.0 2021-03-17T21:13:44,471 Found link https://files.pythonhosted.org/packages/4e/6a/39ceadc46d09cc2b2a42a5ef7cd65bc8d535ade2492efc8338a4e6ae5fdb/pysb-1.1.1.tar.gz#sha256=03d96784c558f557e9ec1f9d006670c6ce6a28f92e5724e75143e328426fb153 (from https://pypi.org/simple/pysb/), version: 1.1.1 2021-03-17T21:13:44,471 Found link https://files.pythonhosted.org/packages/ac/ce/f692a3683e7d2ba99bc29f0491490684f6ffdb2358fac969fb162268a1fe/pysb-1.2.0.tar.gz#sha256=625d7b26072e15f122daca4eec283ef74df5c18ca5b431d89ef5479ef5cd9a69 (from https://pypi.org/simple/pysb/), version: 1.2.0 2021-03-17T21:13:44,471 Found link https://files.pythonhosted.org/packages/da/91/9546968cfc9e53c0e52a06602299b56fe05f69cee890c6497991d4d8d0e9/pysb-1.2.1.tar.gz#sha256=09a92fbc47ca93952d186c7d58b993df8173bc853e17ff7895eada18d3bf14b9 (from https://pypi.org/simple/pysb/), version: 1.2.1 2021-03-17T21:13:44,471 Found link https://files.pythonhosted.org/packages/52/53/3e174e8c7ea81409e342b06b126ade799840051c2f674358ebe8caafb8ba/pysb-1.2.2.tar.gz#sha256=79b6a9158a6ec74e0f4f0d508851ac4021222ee386c014e5a4bb38c1f0fae7b8 (from https://pypi.org/simple/pysb/), version: 1.2.2 2021-03-17T21:13:44,472 Found link https://files.pythonhosted.org/packages/93/03/403b0e4e634002dc41ac761abca340c66b4ddf1f309fc164504a1b7e6e48/pysb-1.3.0.tar.gz#sha256=e255271d762691c718806d602e7b7b619872c90288eacdc224b58710a0fc8a7b (from https://pypi.org/simple/pysb/), version: 1.3.0 2021-03-17T21:13:44,472 Found link https://files.pythonhosted.org/packages/cc/fd/5af895669c3e361d06050293c2be3815dc41524a8ff79f90f36717c6c7c0/pysb-1.4.0.tar.gz#sha256=dd65a6fa20a192214247d3248a725ccb37139dabbac22707624ceab988a31ce5 (from https://pypi.org/simple/pysb/), version: 1.4.0 2021-03-17T21:13:44,472 Found link https://files.pythonhosted.org/packages/bb/b0/af7e573adcfbafb37cd73ba98fad73b9c1838bd00421697df68ca2486cc2/pysb-1.5.0.tar.gz#sha256=5aa49d5019af317cd29d3462a9f305e7f1b1137347f53a64cb79e98a98c12f6e (from https://pypi.org/simple/pysb/), version: 1.5.0 2021-03-17T21:13:44,473 Found link https://files.pythonhosted.org/packages/10/fb/a52b99ec02064d7f7a560dab813c5ac318e96ee9dbe10bc1f954d8968436/pysb-1.6.0.tar.gz#sha256=cbe4e0eac66bd9097554b85d1d7d2a10e3031e4a1faaddb9d222708f609c82cf (from https://pypi.org/simple/pysb/), version: 1.6.0 2021-03-17T21:13:44,473 Found link https://files.pythonhosted.org/packages/a4/82/5b9739400888d4bdd760ccc696fbb1f6a01e1e34eb3521c4e6dcc9c194c4/pysb-1.7.0.tar.gz#sha256=4ddbc93b15783ba62c62ff2e16141ee3b57082d95df9c7aa2879924308da707d (from https://pypi.org/simple/pysb/), version: 1.7.0 2021-03-17T21:13:44,473 Found link https://files.pythonhosted.org/packages/c5/e7/4796b8017dca3c5e9526715585da8cef9f8870e8a48cca68e35eec39c9ed/pysb-1.8.0.tar.gz#sha256=e5123775c18e8b68233cb3df89b6f99456373feb66028fd72fbe72a1283c6350 (from https://pypi.org/simple/pysb/), version: 1.8.0 2021-03-17T21:13:44,473 Found link https://files.pythonhosted.org/packages/67/a8/dd3133119bc06bd09860c3e61155f20252dd5d9bd6677e70756d4c878277/pysb-1.8.1.tar.gz#sha256=e62f4ea8d49535913dfb855df78ea8d2366673f5fe500691f605315ed32f08ff (from https://pypi.org/simple/pysb/), version: 1.8.1 2021-03-17T21:13:44,474 Found link https://files.pythonhosted.org/packages/80/b5/1a079af59e6d36a31127fb50332726e60ee0a1736d389ea722c56bfd4dbe/pysb-1.9.0.tar.gz#sha256=c613d196dc1b7a01a03229f915e3e5870dbd818c903149bce451f01522bfdd27 (from https://pypi.org/simple/pysb/), version: 1.9.0 2021-03-17T21:13:44,474 Found link https://files.pythonhosted.org/packages/ca/a2/7d42b33ade5060268a2938afc257dfb8034ff49322857c4ecce13a16dd60/pysb-1.9.1.tar.gz#sha256=2c3c51a8b3a0ce6ea771f761bc9fb366e9c9fe9860e90cc49e34e12a615956bb (from https://pypi.org/simple/pysb/), version: 1.9.1 2021-03-17T21:13:44,474 Found link https://files.pythonhosted.org/packages/e1/92/f6712c0783c481a3c9b9282c0da60ecefe1e1bb32603cb278d2398a58133/pysb-1.10.0.tar.gz#sha256=4fb99c5113817ae0e5d9185613c40ee9eeffc35eb0c7d6486d2ff8d5485fb484 (from https://pypi.org/simple/pysb/), version: 1.10.0 2021-03-17T21:13:44,475 Found link https://files.pythonhosted.org/packages/ef/bd/1a8c8e062af5807fee56cc70afe2cfd384e1fdc46bb9d2c4bd5ee0239a04/pysb-1.11.0.tar.gz#sha256=b827cb30ada1bf2cb60c2d37d44879f17864c0af5d4da169c2a762948e2b4b26 (from https://pypi.org/simple/pysb/), version: 1.11.0 2021-03-17T21:13:44,476 Found link https://files.pythonhosted.org/packages/b4/ad/0f98b45857d2c41b193f61699da093803aae00a9a017791d030da490fb45/pysb-1.11.1.tar.gz#sha256=37f7f620d043c6247af4b3c65461f9aad09532636ed99b37a2ff4ebafff7d43f (from https://pypi.org/simple/pysb/) (requires-python:>2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*), version: 1.11.1 2021-03-17T21:13:44,477 Found link https://files.pythonhosted.org/packages/d6/7d/1b06a51aa5403e526b63fddfc38885fcba7d0c104ffc6e2462979ad93d96/pysb-1.12.0.tar.gz#sha256=db0d153c1b48c03ae554835aaa472eb3482cdf41cb336328aa1f1e81fa130be2 (from https://pypi.org/simple/pysb/) (requires-python:>=3.6), version: 1.12.0 2021-03-17T21:13:44,495 Given no hashes to check 1 links for project 'pysb': discarding no candidates 2021-03-17T21:13:44,509 Collecting pysb==1.12.0 2021-03-17T21:13:44,511 Created temporary directory: /tmp/pip-unpack-ghcbc3ku 2021-03-17T21:13:44,694 Downloading pysb-1.12.0.tar.gz (355 kB) 2021-03-17T21:13:45,205 Added pysb==1.12.0 from https://files.pythonhosted.org/packages/d6/7d/1b06a51aa5403e526b63fddfc38885fcba7d0c104ffc6e2462979ad93d96/pysb-1.12.0.tar.gz#sha256=db0d153c1b48c03ae554835aaa472eb3482cdf41cb336328aa1f1e81fa130be2 to build tracker '/tmp/pip-req-tracker-4m47c21i' 2021-03-17T21:13:45,206 Running setup.py (path:/tmp/pip-wheel-2kfro51x/pysb_f644606a6b4f4cc88693a3ef1b79b619/setup.py) egg_info for package pysb 2021-03-17T21:13:45,207 Created temporary directory: /tmp/pip-pip-egg-info-1r81_6j0 2021-03-17T21:13:45,208 Running command python setup.py egg_info 2021-03-17T21:13:49,104 running egg_info 2021-03-17T21:13:49,106 creating /tmp/pip-pip-egg-info-1r81_6j0/pysb.egg-info 2021-03-17T21:13:49,107 writing /tmp/pip-pip-egg-info-1r81_6j0/pysb.egg-info/PKG-INFO 2021-03-17T21:13:49,109 writing dependency_links to /tmp/pip-pip-egg-info-1r81_6j0/pysb.egg-info/dependency_links.txt 2021-03-17T21:13:49,111 writing requirements to /tmp/pip-pip-egg-info-1r81_6j0/pysb.egg-info/requires.txt 2021-03-17T21:13:49,112 writing top-level names to /tmp/pip-pip-egg-info-1r81_6j0/pysb.egg-info/top_level.txt 2021-03-17T21:13:49,114 writing manifest file '/tmp/pip-pip-egg-info-1r81_6j0/pysb.egg-info/SOURCES.txt' 2021-03-17T21:13:49,143 reading manifest file '/tmp/pip-pip-egg-info-1r81_6j0/pysb.egg-info/SOURCES.txt' 2021-03-17T21:13:49,145 reading manifest template 'MANIFEST.in' 2021-03-17T21:13:49,153 no previously-included directories found matching 'doc/_build' 2021-03-17T21:13:49,160 writing manifest file '/tmp/pip-pip-egg-info-1r81_6j0/pysb.egg-info/SOURCES.txt' 2021-03-17T21:13:49,229 Source in /tmp/pip-wheel-2kfro51x/pysb_f644606a6b4f4cc88693a3ef1b79b619 has version 1.12.0, which satisfies requirement pysb==1.12.0 from https://files.pythonhosted.org/packages/d6/7d/1b06a51aa5403e526b63fddfc38885fcba7d0c104ffc6e2462979ad93d96/pysb-1.12.0.tar.gz#sha256=db0d153c1b48c03ae554835aaa472eb3482cdf41cb336328aa1f1e81fa130be2 2021-03-17T21:13:49,230 Removed pysb==1.12.0 from https://files.pythonhosted.org/packages/d6/7d/1b06a51aa5403e526b63fddfc38885fcba7d0c104ffc6e2462979ad93d96/pysb-1.12.0.tar.gz#sha256=db0d153c1b48c03ae554835aaa472eb3482cdf41cb336328aa1f1e81fa130be2 from build tracker '/tmp/pip-req-tracker-4m47c21i' 2021-03-17T21:13:49,236 Created temporary directory: /tmp/pip-unpack-74411in9 2021-03-17T21:13:49,237 Building wheels for collected packages: pysb 2021-03-17T21:13:49,241 Created temporary directory: /tmp/pip-wheel-095_7_l0 2021-03-17T21:13:49,242 Building wheel for pysb (setup.py): started 2021-03-17T21:13:49,242 Destination directory: /tmp/pip-wheel-095_7_l0 2021-03-17T21:13:49,242 Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-2kfro51x/pysb_f644606a6b4f4cc88693a3ef1b79b619/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-2kfro51x/pysb_f644606a6b4f4cc88693a3ef1b79b619/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-095_7_l0 2021-03-17T21:13:50,759 running bdist_wheel 2021-03-17T21:13:50,763 running build 2021-03-17T21:13:50,763 running build_py 2021-03-17T21:13:50,770 creating build 2021-03-17T21:13:50,771 creating build/lib 2021-03-17T21:13:50,771 creating build/lib/pysb 2021-03-17T21:13:50,773 copying pysb/pattern.py -> build/lib/pysb 2021-03-17T21:13:50,776 copying pysb/pathfinder.py -> build/lib/pysb 2021-03-17T21:13:50,778 copying pysb/integrate.py -> build/lib/pysb 2021-03-17T21:13:50,781 copying pysb/macros.py -> build/lib/pysb 2021-03-17T21:13:50,786 copying pysb/bng.py -> build/lib/pysb 2021-03-17T21:13:50,789 copying pysb/anneal_mod.py -> build/lib/pysb 2021-03-17T21:13:50,791 copying pysb/logging.py -> build/lib/pysb 2021-03-17T21:13:50,794 copying pysb/core.py -> build/lib/pysb 2021-03-17T21:13:50,800 copying pysb/_version.py -> build/lib/pysb 2021-03-17T21:13:50,802 copying pysb/builder.py -> build/lib/pysb 2021-03-17T21:13:50,805 copying pysb/merge.py -> build/lib/pysb 2021-03-17T21:13:50,807 copying pysb/jacobian.py -> build/lib/pysb 2021-03-17T21:13:50,810 copying pysb/__init__.py -> build/lib/pysb 2021-03-17T21:13:50,812 copying pysb/util.py -> build/lib/pysb 2021-03-17T21:13:50,814 copying pysb/annotation.py -> build/lib/pysb 2021-03-17T21:13:50,817 copying pysb/kappa.py -> build/lib/pysb 2021-03-17T21:13:50,820 creating build/lib/pysb/generator 2021-03-17T21:13:50,821 copying pysb/generator/bng.py -> build/lib/pysb/generator 2021-03-17T21:13:50,824 copying pysb/generator/__init__.py -> build/lib/pysb/generator 2021-03-17T21:13:50,826 copying pysb/generator/kappa.py -> build/lib/pysb/generator 2021-03-17T21:13:50,829 creating build/lib/pysb/importers 2021-03-17T21:13:50,831 copying pysb/importers/json.py -> build/lib/pysb/importers 2021-03-17T21:13:50,834 copying pysb/importers/__init__.py -> build/lib/pysb/importers 2021-03-17T21:13:50,835 copying pysb/importers/sbml.py -> build/lib/pysb/importers 2021-03-17T21:13:50,838 copying pysb/importers/bngl.py -> build/lib/pysb/importers 2021-03-17T21:13:50,841 copying pysb/importers/kappa.py -> build/lib/pysb/importers 2021-03-17T21:13:50,844 creating build/lib/pysb/tools 2021-03-17T21:13:50,845 copying pysb/tools/species_graph.py -> build/lib/pysb/tools 2021-03-17T21:13:50,848 copying pysb/tools/render_reactions.py -> build/lib/pysb/tools 2021-03-17T21:13:50,851 copying pysb/tools/__init__.py -> build/lib/pysb/tools 2021-03-17T21:13:50,852 copying pysb/tools/render_species.py -> build/lib/pysb/tools 2021-03-17T21:13:50,855 copying pysb/tools/sensitivity_analysis.py -> build/lib/pysb/tools 2021-03-17T21:13:50,860 creating build/lib/pysb/examples 2021-03-17T21:13:50,861 copying pysb/examples/tutorial_a.py -> build/lib/pysb/examples 2021-03-17T21:13:50,863 copying pysb/examples/michment.py -> build/lib/pysb/examples 2021-03-17T21:13:50,866 copying pysb/examples/run_bng_ssa_example.py -> build/lib/pysb/examples 2021-03-17T21:13:50,868 copying pysb/examples/run_tyson_oscillator_stochkit.py -> build/lib/pysb/examples 2021-03-17T21:13:50,870 copying pysb/examples/tutorial_b.py -> build/lib/pysb/examples 2021-03-17T21:13:50,872 copying pysb/examples/bngwiki_enzymatic_cycle_mm.py -> build/lib/pysb/examples 2021-03-17T21:13:50,875 copying pysb/examples/run_earm_hpp.py -> build/lib/pysb/examples 2021-03-17T21:13:50,877 copying pysb/examples/explicit.py -> build/lib/pysb/examples 2021-03-17T21:13:50,879 copying pysb/examples/bngwiki_simple.py -> build/lib/pysb/examples 2021-03-17T21:13:50,882 copying pysb/examples/kinase_cascade.py -> build/lib/pysb/examples 2021-03-17T21:13:50,884 copying pysb/examples/move_connected.py -> build/lib/pysb/examples 2021-03-17T21:13:50,886 copying pysb/examples/tutorial_c.py -> build/lib/pysb/examples 2021-03-17T21:13:50,888 copying pysb/examples/synth_deg.py -> build/lib/pysb/examples 2021-03-17T21:13:50,891 copying pysb/examples/run_tyson_oscillator.py -> build/lib/pysb/examples 2021-03-17T21:13:50,893 copying pysb/examples/run_michment.py -> build/lib/pysb/examples 2021-03-17T21:13:50,896 copying pysb/examples/run_robertson.py -> build/lib/pysb/examples 2021-03-17T21:13:50,898 copying pysb/examples/run_tutorial_a.py -> build/lib/pysb/examples 2021-03-17T21:13:50,900 copying pysb/examples/run_fixed_initial.py -> build/lib/pysb/examples 2021-03-17T21:13:50,902 copying pysb/examples/run_bax_pore.py -> build/lib/pysb/examples 2021-03-17T21:13:50,904 copying pysb/examples/fricker_2010_apoptosis.py -> build/lib/pysb/examples 2021-03-17T21:13:50,907 copying pysb/examples/earm_1_0.py -> build/lib/pysb/examples 2021-03-17T21:13:50,910 copying pysb/examples/bax_pore_sequential.py -> build/lib/pysb/examples 2021-03-17T21:13:50,912 copying pysb/examples/bngwiki_egfr_simple.py -> build/lib/pysb/examples 2021-03-17T21:13:50,914 copying pysb/examples/run_earm_stochkit.py -> build/lib/pysb/examples 2021-03-17T21:13:50,916 copying pysb/examples/expression_observables.py -> build/lib/pysb/examples 2021-03-17T21:13:50,918 copying pysb/examples/run_earm_1_0.py -> build/lib/pysb/examples 2021-03-17T21:13:50,921 copying pysb/examples/__init__.py -> build/lib/pysb/examples 2021-03-17T21:13:50,922 copying pysb/examples/localfunc.py -> build/lib/pysb/examples 2021-03-17T21:13:50,924 copying pysb/examples/bax_pore.py -> build/lib/pysb/examples 2021-03-17T21:13:50,927 copying pysb/examples/earm_1_3.py -> build/lib/pysb/examples 2021-03-17T21:13:50,929 copying pysb/examples/robertson.py -> build/lib/pysb/examples 2021-03-17T21:13:50,932 copying pysb/examples/run_kinase_cascade.py -> build/lib/pysb/examples 2021-03-17T21:13:50,934 copying pysb/examples/hello_pysb.py -> build/lib/pysb/examples 2021-03-17T21:13:50,936 copying pysb/examples/tyson_oscillator.py -> build/lib/pysb/examples 2021-03-17T21:13:50,939 copying pysb/examples/fixed_initial.py -> build/lib/pysb/examples 2021-03-17T21:13:50,941 copying pysb/examples/run_bax_pore_sequential.py -> build/lib/pysb/examples 2021-03-17T21:13:50,945 creating build/lib/pysb/export 2021-03-17T21:13:50,946 copying pysb/export/python.py -> build/lib/pysb/export 2021-03-17T21:13:50,949 copying pysb/export/bng_net.py -> build/lib/pysb/export 2021-03-17T21:13:50,951 copying pysb/export/potterswheel.py -> build/lib/pysb/export 2021-03-17T21:13:50,953 copying pysb/export/mathematica.py -> build/lib/pysb/export 2021-03-17T21:13:50,956 copying pysb/export/json.py -> build/lib/pysb/export 2021-03-17T21:13:50,959 copying pysb/export/pysb_flat.py -> build/lib/pysb/export 2021-03-17T21:13:50,961 copying pysb/export/__init__.py -> build/lib/pysb/export 2021-03-17T21:13:50,964 copying pysb/export/__main__.py -> build/lib/pysb/export 2021-03-17T21:13:50,966 copying pysb/export/sbml.py -> build/lib/pysb/export 2021-03-17T21:13:50,969 copying pysb/export/matlab.py -> build/lib/pysb/export 2021-03-17T21:13:50,972 copying pysb/export/stochkit.py -> build/lib/pysb/export 2021-03-17T21:13:50,974 copying pysb/export/bngl.py -> build/lib/pysb/export 2021-03-17T21:13:50,977 copying pysb/export/kappa.py -> build/lib/pysb/export 2021-03-17T21:13:50,980 creating build/lib/pysb/simulator 2021-03-17T21:13:50,981 copying pysb/simulator/base.py -> build/lib/pysb/simulator 2021-03-17T21:13:50,985 copying pysb/simulator/scipyode.py -> build/lib/pysb/simulator 2021-03-17T21:13:50,989 copying pysb/simulator/bng.py -> build/lib/pysb/simulator 2021-03-17T21:13:50,991 copying pysb/simulator/cupsoda.py -> build/lib/pysb/simulator 2021-03-17T21:13:50,995 copying pysb/simulator/__init__.py -> build/lib/pysb/simulator 2021-03-17T21:13:50,997 copying pysb/simulator/stochkit.py -> build/lib/pysb/simulator 2021-03-17T21:13:51,000 copying pysb/simulator/kappa.py -> build/lib/pysb/simulator 2021-03-17T21:13:51,003 creating build/lib/pysb/testing 2021-03-17T21:13:51,004 copying pysb/testing/__init__.py -> build/lib/pysb/testing 2021-03-17T21:13:51,007 copying pysb/testing/modeltests.py -> build/lib/pysb/testing 2021-03-17T21:13:51,011 creating build/lib/pysb/tests 2021-03-17T21:13:51,012 copying pysb/tests/test_importers.py -> build/lib/pysb/tests 2021-03-17T21:13:51,015 copying pysb/tests/test_examples.py -> build/lib/pysb/tests 2021-03-17T21:13:51,017 copying pysb/tests/test_util.py -> build/lib/pysb/tests 2021-03-17T21:13:51,020 copying pysb/tests/test_exporters.py -> build/lib/pysb/tests 2021-03-17T21:13:51,022 copying pysb/tests/test_expressions.py -> build/lib/pysb/tests 2021-03-17T21:13:51,025 copying pysb/tests/test_core.py -> build/lib/pysb/tests 2021-03-17T21:13:51,028 copying pysb/tests/test_kappa.py -> build/lib/pysb/tests 2021-03-17T21:13:51,030 copying pysb/tests/test_local_only.py -> build/lib/pysb/tests 2021-03-17T21:13:51,032 copying pysb/tests/test_simulator_stochkit.py -> build/lib/pysb/tests 2021-03-17T21:13:51,035 copying pysb/tests/test_sensitivity_analysis.py -> build/lib/pysb/tests 2021-03-17T21:13:51,038 copying pysb/tests/test_simulationresult.py -> build/lib/pysb/tests 2021-03-17T21:13:51,041 copying pysb/tests/test_simulator_cupsoda.py -> build/lib/pysb/tests 2021-03-17T21:13:51,044 copying pysb/tests/test_integrate.py -> build/lib/pysb/tests 2021-03-17T21:13:51,046 copying pysb/tests/test_pattern.py -> build/lib/pysb/tests 2021-03-17T21:13:51,049 copying pysb/tests/jacobian_runtimes.py -> build/lib/pysb/tests 2021-03-17T21:13:51,051 copying pysb/tests/test_merge.py -> build/lib/pysb/tests 2021-03-17T21:13:51,053 copying pysb/tests/test_bng.py -> build/lib/pysb/tests 2021-03-17T21:13:51,056 copying pysb/tests/test_macros.py -> build/lib/pysb/tests 2021-03-17T21:13:51,058 copying pysb/tests/__init__.py -> build/lib/pysb/tests 2021-03-17T21:13:51,060 copying pysb/tests/test_importer_kappa.py -> build/lib/pysb/tests 2021-03-17T21:13:51,062 copying pysb/tests/test_simulator_bng.py -> build/lib/pysb/tests 2021-03-17T21:13:51,065 copying pysb/tests/test_simulator_scipy.py -> build/lib/pysb/tests 2021-03-17T21:13:51,068 copying pysb/tests/test_simulator_kappa.py -> build/lib/pysb/tests 2021-03-17T21:13:51,081 UPDATING build/lib/pysb/_version.py 2021-03-17T21:13:51,082 set build/lib/pysb/_version.py to '1.12.0' 2021-03-17T21:13:51,083 running build_scripts 2021-03-17T21:13:51,083 creating build/scripts-3.7 2021-03-17T21:13:51,084 copying and adjusting scripts/pysb_export -> build/scripts-3.7 2021-03-17T21:13:51,085 changing mode of build/scripts-3.7/pysb_export from 644 to 755 2021-03-17T21:13:51,090 installing to build/bdist.linux-armv7l/wheel 2021-03-17T21:13:51,090 running install 2021-03-17T21:13:51,092 running install_lib 2021-03-17T21:13:51,096 creating build/bdist.linux-armv7l 2021-03-17T21:13:51,096 creating build/bdist.linux-armv7l/wheel 2021-03-17T21:13:51,098 creating build/bdist.linux-armv7l/wheel/pysb 2021-03-17T21:13:51,100 creating build/bdist.linux-armv7l/wheel/pysb/testing 2021-03-17T21:13:51,101 copying build/lib/pysb/testing/__init__.py -> build/bdist.linux-armv7l/wheel/pysb/testing 2021-03-17T21:13:51,104 copying build/lib/pysb/testing/modeltests.py -> build/bdist.linux-armv7l/wheel/pysb/testing 2021-03-17T21:13:51,108 creating build/bdist.linux-armv7l/wheel/pysb/tests 2021-03-17T21:13:51,109 copying build/lib/pysb/tests/test_importers.py -> build/bdist.linux-armv7l/wheel/pysb/tests 2021-03-17T21:13:51,111 copying build/lib/pysb/tests/test_examples.py -> build/bdist.linux-armv7l/wheel/pysb/tests 2021-03-17T21:13:51,113 copying build/lib/pysb/tests/test_util.py -> build/bdist.linux-armv7l/wheel/pysb/tests 2021-03-17T21:13:51,116 copying build/lib/pysb/tests/test_exporters.py -> build/bdist.linux-armv7l/wheel/pysb/tests 2021-03-17T21:13:51,119 copying build/lib/pysb/tests/test_expressions.py -> build/bdist.linux-armv7l/wheel/pysb/tests 2021-03-17T21:13:51,122 copying build/lib/pysb/tests/test_core.py -> build/bdist.linux-armv7l/wheel/pysb/tests 2021-03-17T21:13:51,125 copying build/lib/pysb/tests/test_kappa.py -> build/bdist.linux-armv7l/wheel/pysb/tests 2021-03-17T21:13:51,128 copying build/lib/pysb/tests/test_local_only.py -> build/bdist.linux-armv7l/wheel/pysb/tests 2021-03-17T21:13:51,130 copying build/lib/pysb/tests/test_simulator_stochkit.py -> build/bdist.linux-armv7l/wheel/pysb/tests 2021-03-17T21:13:51,133 copying build/lib/pysb/tests/test_sensitivity_analysis.py -> build/bdist.linux-armv7l/wheel/pysb/tests 2021-03-17T21:13:51,136 copying build/lib/pysb/tests/test_simulationresult.py -> build/bdist.linux-armv7l/wheel/pysb/tests 2021-03-17T21:13:51,139 copying build/lib/pysb/tests/test_simulator_cupsoda.py -> build/bdist.linux-armv7l/wheel/pysb/tests 2021-03-17T21:13:51,142 copying build/lib/pysb/tests/test_integrate.py -> build/bdist.linux-armv7l/wheel/pysb/tests 2021-03-17T21:13:51,145 copying build/lib/pysb/tests/test_pattern.py -> build/bdist.linux-armv7l/wheel/pysb/tests 2021-03-17T21:13:51,147 copying build/lib/pysb/tests/jacobian_runtimes.py -> build/bdist.linux-armv7l/wheel/pysb/tests 2021-03-17T21:13:51,150 copying build/lib/pysb/tests/test_merge.py -> build/bdist.linux-armv7l/wheel/pysb/tests 2021-03-17T21:13:51,152 copying build/lib/pysb/tests/test_bng.py -> build/bdist.linux-armv7l/wheel/pysb/tests 2021-03-17T21:13:51,155 copying build/lib/pysb/tests/test_macros.py -> build/bdist.linux-armv7l/wheel/pysb/tests 2021-03-17T21:13:51,157 copying build/lib/pysb/tests/__init__.py -> build/bdist.linux-armv7l/wheel/pysb/tests 2021-03-17T21:13:51,160 copying build/lib/pysb/tests/test_importer_kappa.py -> build/bdist.linux-armv7l/wheel/pysb/tests 2021-03-17T21:13:51,163 copying build/lib/pysb/tests/test_simulator_bng.py -> build/bdist.linux-armv7l/wheel/pysb/tests 2021-03-17T21:13:51,166 copying build/lib/pysb/tests/test_simulator_scipy.py -> build/bdist.linux-armv7l/wheel/pysb/tests 2021-03-17T21:13:51,169 copying build/lib/pysb/tests/test_simulator_kappa.py -> build/bdist.linux-armv7l/wheel/pysb/tests 2021-03-17T21:13:51,171 copying build/lib/pysb/pattern.py -> build/bdist.linux-armv7l/wheel/pysb 2021-03-17T21:13:51,176 creating build/bdist.linux-armv7l/wheel/pysb/importers 2021-03-17T21:13:51,177 copying build/lib/pysb/importers/json.py -> build/bdist.linux-armv7l/wheel/pysb/importers 2021-03-17T21:13:51,180 copying build/lib/pysb/importers/__init__.py -> build/bdist.linux-armv7l/wheel/pysb/importers 2021-03-17T21:13:51,183 copying build/lib/pysb/importers/sbml.py -> build/bdist.linux-armv7l/wheel/pysb/importers 2021-03-17T21:13:51,185 copying build/lib/pysb/importers/bngl.py -> build/bdist.linux-armv7l/wheel/pysb/importers 2021-03-17T21:13:51,189 copying build/lib/pysb/importers/kappa.py -> build/bdist.linux-armv7l/wheel/pysb/importers 2021-03-17T21:13:51,191 copying build/lib/pysb/pathfinder.py -> build/bdist.linux-armv7l/wheel/pysb 2021-03-17T21:13:51,194 copying build/lib/pysb/integrate.py -> build/bdist.linux-armv7l/wheel/pysb 2021-03-17T21:13:51,198 creating build/bdist.linux-armv7l/wheel/pysb/generator 2021-03-17T21:13:51,199 copying build/lib/pysb/generator/bng.py -> build/bdist.linux-armv7l/wheel/pysb/generator 2021-03-17T21:13:51,202 copying build/lib/pysb/generator/__init__.py -> build/bdist.linux-armv7l/wheel/pysb/generator 2021-03-17T21:13:51,204 copying build/lib/pysb/generator/kappa.py -> build/bdist.linux-armv7l/wheel/pysb/generator 2021-03-17T21:13:51,208 creating build/bdist.linux-armv7l/wheel/pysb/examples 2021-03-17T21:13:51,209 copying build/lib/pysb/examples/tutorial_a.py -> build/bdist.linux-armv7l/wheel/pysb/examples 2021-03-17T21:13:51,212 copying build/lib/pysb/examples/michment.py -> build/bdist.linux-armv7l/wheel/pysb/examples 2021-03-17T21:13:51,214 copying build/lib/pysb/examples/run_bng_ssa_example.py -> build/bdist.linux-armv7l/wheel/pysb/examples 2021-03-17T21:13:51,217 copying build/lib/pysb/examples/run_tyson_oscillator_stochkit.py -> build/bdist.linux-armv7l/wheel/pysb/examples 2021-03-17T21:13:51,219 copying build/lib/pysb/examples/tutorial_b.py -> build/bdist.linux-armv7l/wheel/pysb/examples 2021-03-17T21:13:51,221 copying build/lib/pysb/examples/bngwiki_enzymatic_cycle_mm.py -> build/bdist.linux-armv7l/wheel/pysb/examples 2021-03-17T21:13:51,224 copying build/lib/pysb/examples/run_earm_hpp.py -> build/bdist.linux-armv7l/wheel/pysb/examples 2021-03-17T21:13:51,226 copying build/lib/pysb/examples/explicit.py -> build/bdist.linux-armv7l/wheel/pysb/examples 2021-03-17T21:13:51,228 copying build/lib/pysb/examples/bngwiki_simple.py -> build/bdist.linux-armv7l/wheel/pysb/examples 2021-03-17T21:13:51,231 copying build/lib/pysb/examples/kinase_cascade.py -> build/bdist.linux-armv7l/wheel/pysb/examples 2021-03-17T21:13:51,233 copying build/lib/pysb/examples/move_connected.py -> build/bdist.linux-armv7l/wheel/pysb/examples 2021-03-17T21:13:51,235 copying build/lib/pysb/examples/tutorial_c.py -> build/bdist.linux-armv7l/wheel/pysb/examples 2021-03-17T21:13:51,238 copying build/lib/pysb/examples/synth_deg.py -> build/bdist.linux-armv7l/wheel/pysb/examples 2021-03-17T21:13:51,240 copying build/lib/pysb/examples/run_tyson_oscillator.py -> build/bdist.linux-armv7l/wheel/pysb/examples 2021-03-17T21:13:51,242 copying build/lib/pysb/examples/run_michment.py -> build/bdist.linux-armv7l/wheel/pysb/examples 2021-03-17T21:13:51,245 copying build/lib/pysb/examples/run_robertson.py -> build/bdist.linux-armv7l/wheel/pysb/examples 2021-03-17T21:13:51,247 copying build/lib/pysb/examples/run_tutorial_a.py -> build/bdist.linux-armv7l/wheel/pysb/examples 2021-03-17T21:13:51,249 copying build/lib/pysb/examples/run_fixed_initial.py -> build/bdist.linux-armv7l/wheel/pysb/examples 2021-03-17T21:13:51,252 copying build/lib/pysb/examples/run_bax_pore.py -> build/bdist.linux-armv7l/wheel/pysb/examples 2021-03-17T21:13:51,254 copying build/lib/pysb/examples/fricker_2010_apoptosis.py -> build/bdist.linux-armv7l/wheel/pysb/examples 2021-03-17T21:13:51,257 copying build/lib/pysb/examples/earm_1_0.py -> build/bdist.linux-armv7l/wheel/pysb/examples 2021-03-17T21:13:51,260 copying build/lib/pysb/examples/bax_pore_sequential.py -> build/bdist.linux-armv7l/wheel/pysb/examples 2021-03-17T21:13:51,262 copying build/lib/pysb/examples/bngwiki_egfr_simple.py -> build/bdist.linux-armv7l/wheel/pysb/examples 2021-03-17T21:13:51,265 copying build/lib/pysb/examples/run_earm_stochkit.py -> build/bdist.linux-armv7l/wheel/pysb/examples 2021-03-17T21:13:51,267 copying build/lib/pysb/examples/expression_observables.py -> build/bdist.linux-armv7l/wheel/pysb/examples 2021-03-17T21:13:51,270 copying build/lib/pysb/examples/run_earm_1_0.py -> build/bdist.linux-armv7l/wheel/pysb/examples 2021-03-17T21:13:51,272 copying build/lib/pysb/examples/__init__.py -> build/bdist.linux-armv7l/wheel/pysb/examples 2021-03-17T21:13:51,274 copying build/lib/pysb/examples/localfunc.py -> build/bdist.linux-armv7l/wheel/pysb/examples 2021-03-17T21:13:51,276 copying build/lib/pysb/examples/bax_pore.py -> build/bdist.linux-armv7l/wheel/pysb/examples 2021-03-17T21:13:51,279 copying build/lib/pysb/examples/earm_1_3.py -> build/bdist.linux-armv7l/wheel/pysb/examples 2021-03-17T21:13:51,281 copying build/lib/pysb/examples/robertson.py -> build/bdist.linux-armv7l/wheel/pysb/examples 2021-03-17T21:13:51,284 copying build/lib/pysb/examples/run_kinase_cascade.py -> build/bdist.linux-armv7l/wheel/pysb/examples 2021-03-17T21:13:51,286 copying build/lib/pysb/examples/hello_pysb.py -> build/bdist.linux-armv7l/wheel/pysb/examples 2021-03-17T21:13:51,289 copying build/lib/pysb/examples/tyson_oscillator.py -> build/bdist.linux-armv7l/wheel/pysb/examples 2021-03-17T21:13:51,291 copying build/lib/pysb/examples/fixed_initial.py -> build/bdist.linux-armv7l/wheel/pysb/examples 2021-03-17T21:13:51,294 copying build/lib/pysb/examples/run_bax_pore_sequential.py -> build/bdist.linux-armv7l/wheel/pysb/examples 2021-03-17T21:13:51,296 copying build/lib/pysb/macros.py -> build/bdist.linux-armv7l/wheel/pysb 2021-03-17T21:13:51,303 copying build/lib/pysb/bng.py -> build/bdist.linux-armv7l/wheel/pysb 2021-03-17T21:13:51,307 copying build/lib/pysb/anneal_mod.py -> build/bdist.linux-armv7l/wheel/pysb 2021-03-17T21:13:51,310 creating build/bdist.linux-armv7l/wheel/pysb/simulator 2021-03-17T21:13:51,312 copying build/lib/pysb/simulator/base.py -> build/bdist.linux-armv7l/wheel/pysb/simulator 2021-03-17T21:13:51,317 copying build/lib/pysb/simulator/scipyode.py -> build/bdist.linux-armv7l/wheel/pysb/simulator 2021-03-17T21:13:51,320 copying build/lib/pysb/simulator/bng.py -> build/bdist.linux-armv7l/wheel/pysb/simulator 2021-03-17T21:13:51,323 copying build/lib/pysb/simulator/cupsoda.py -> build/bdist.linux-armv7l/wheel/pysb/simulator 2021-03-17T21:13:51,327 copying build/lib/pysb/simulator/__init__.py -> build/bdist.linux-armv7l/wheel/pysb/simulator 2021-03-17T21:13:51,329 copying build/lib/pysb/simulator/stochkit.py -> build/bdist.linux-armv7l/wheel/pysb/simulator 2021-03-17T21:13:51,332 copying build/lib/pysb/simulator/kappa.py -> build/bdist.linux-armv7l/wheel/pysb/simulator 2021-03-17T21:13:51,335 copying build/lib/pysb/logging.py -> build/bdist.linux-armv7l/wheel/pysb 2021-03-17T21:13:51,338 copying build/lib/pysb/core.py -> build/bdist.linux-armv7l/wheel/pysb 2021-03-17T21:13:51,344 copying build/lib/pysb/_version.py -> build/bdist.linux-armv7l/wheel/pysb 2021-03-17T21:13:51,346 copying build/lib/pysb/builder.py -> build/bdist.linux-armv7l/wheel/pysb 2021-03-17T21:13:51,349 copying build/lib/pysb/merge.py -> build/bdist.linux-armv7l/wheel/pysb 2021-03-17T21:13:51,353 creating build/bdist.linux-armv7l/wheel/pysb/export 2021-03-17T21:13:51,354 copying build/lib/pysb/export/python.py -> build/bdist.linux-armv7l/wheel/pysb/export 2021-03-17T21:13:51,357 copying build/lib/pysb/export/bng_net.py -> build/bdist.linux-armv7l/wheel/pysb/export 2021-03-17T21:13:51,360 copying build/lib/pysb/export/potterswheel.py -> build/bdist.linux-armv7l/wheel/pysb/export 2021-03-17T21:13:51,363 copying build/lib/pysb/export/mathematica.py -> build/bdist.linux-armv7l/wheel/pysb/export 2021-03-17T21:13:51,366 copying build/lib/pysb/export/json.py -> build/bdist.linux-armv7l/wheel/pysb/export 2021-03-17T21:13:51,368 copying build/lib/pysb/export/pysb_flat.py -> build/bdist.linux-armv7l/wheel/pysb/export 2021-03-17T21:13:51,371 copying build/lib/pysb/export/__init__.py -> build/bdist.linux-armv7l/wheel/pysb/export 2021-03-17T21:13:51,374 copying build/lib/pysb/export/__main__.py -> build/bdist.linux-armv7l/wheel/pysb/export 2021-03-17T21:13:51,376 copying build/lib/pysb/export/sbml.py -> build/bdist.linux-armv7l/wheel/pysb/export 2021-03-17T21:13:51,380 copying build/lib/pysb/export/matlab.py -> build/bdist.linux-armv7l/wheel/pysb/export 2021-03-17T21:13:51,383 copying build/lib/pysb/export/stochkit.py -> build/bdist.linux-armv7l/wheel/pysb/export 2021-03-17T21:13:51,386 copying build/lib/pysb/export/bngl.py -> build/bdist.linux-armv7l/wheel/pysb/export 2021-03-17T21:13:51,388 copying build/lib/pysb/export/kappa.py -> build/bdist.linux-armv7l/wheel/pysb/export 2021-03-17T21:13:51,391 copying build/lib/pysb/jacobian.py -> build/bdist.linux-armv7l/wheel/pysb 2021-03-17T21:13:51,394 copying build/lib/pysb/__init__.py -> build/bdist.linux-armv7l/wheel/pysb 2021-03-17T21:13:51,396 copying build/lib/pysb/util.py -> build/bdist.linux-armv7l/wheel/pysb 2021-03-17T21:13:51,399 copying build/lib/pysb/annotation.py -> build/bdist.linux-armv7l/wheel/pysb 2021-03-17T21:13:51,402 copying build/lib/pysb/kappa.py -> build/bdist.linux-armv7l/wheel/pysb 2021-03-17T21:13:51,406 creating build/bdist.linux-armv7l/wheel/pysb/tools 2021-03-17T21:13:51,408 copying build/lib/pysb/tools/species_graph.py -> build/bdist.linux-armv7l/wheel/pysb/tools 2021-03-17T21:13:51,410 copying build/lib/pysb/tools/render_reactions.py -> build/bdist.linux-armv7l/wheel/pysb/tools 2021-03-17T21:13:51,413 copying build/lib/pysb/tools/__init__.py -> build/bdist.linux-armv7l/wheel/pysb/tools 2021-03-17T21:13:51,416 copying build/lib/pysb/tools/render_species.py -> build/bdist.linux-armv7l/wheel/pysb/tools 2021-03-17T21:13:51,419 copying build/lib/pysb/tools/sensitivity_analysis.py -> build/bdist.linux-armv7l/wheel/pysb/tools 2021-03-17T21:13:51,422 running install_egg_info 2021-03-17T21:13:51,437 running egg_info 2021-03-17T21:13:51,437 writing pysb.egg-info/PKG-INFO 2021-03-17T21:13:51,439 writing dependency_links to pysb.egg-info/dependency_links.txt 2021-03-17T21:13:51,441 writing requirements to pysb.egg-info/requires.txt 2021-03-17T21:13:51,443 writing top-level names to pysb.egg-info/top_level.txt 2021-03-17T21:13:51,458 reading manifest file 'pysb.egg-info/SOURCES.txt' 2021-03-17T21:13:51,465 reading manifest template 'MANIFEST.in' 2021-03-17T21:13:51,471 no previously-included directories found matching 'doc/_build' 2021-03-17T21:13:51,483 writing manifest file 'pysb.egg-info/SOURCES.txt' 2021-03-17T21:13:51,485 Copying pysb.egg-info to build/bdist.linux-armv7l/wheel/pysb-1.12.0-py3.7.egg-info 2021-03-17T21:13:51,498 running install_scripts 2021-03-17T21:13:51,526 creating build/bdist.linux-armv7l/wheel/pysb-1.12.0.data 2021-03-17T21:13:51,526 creating build/bdist.linux-armv7l/wheel/pysb-1.12.0.data/scripts 2021-03-17T21:13:51,528 copying build/scripts-3.7/pysb_export -> build/bdist.linux-armv7l/wheel/pysb-1.12.0.data/scripts 2021-03-17T21:13:51,530 changing mode of build/bdist.linux-armv7l/wheel/pysb-1.12.0.data/scripts/pysb_export to 755 2021-03-17T21:13:51,556 adding license file "LICENSE.txt" (matched pattern "LICEN[CS]E*") 2021-03-17T21:13:51,563 creating build/bdist.linux-armv7l/wheel/pysb-1.12.0.dist-info/WHEEL 2021-03-17T21:13:51,566 creating '/tmp/pip-wheel-095_7_l0/pysb-1.12.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2021-03-17T21:13:51,569 adding 'pysb/__init__.py' 2021-03-17T21:13:51,571 adding 'pysb/_version.py' 2021-03-17T21:13:51,573 adding 'pysb/anneal_mod.py' 2021-03-17T21:13:51,574 adding 'pysb/annotation.py' 2021-03-17T21:13:51,580 adding 'pysb/bng.py' 2021-03-17T21:13:51,582 adding 'pysb/builder.py' 2021-03-17T21:13:51,599 adding 'pysb/core.py' 2021-03-17T21:13:51,602 adding 'pysb/integrate.py' 2021-03-17T21:13:51,604 adding 'pysb/jacobian.py' 2021-03-17T21:13:51,606 adding 'pysb/kappa.py' 2021-03-17T21:13:51,608 adding 'pysb/logging.py' 2021-03-17T21:13:51,618 adding 'pysb/macros.py' 2021-03-17T21:13:51,620 adding 'pysb/merge.py' 2021-03-17T21:13:51,622 adding 'pysb/pathfinder.py' 2021-03-17T21:13:51,627 adding 'pysb/pattern.py' 2021-03-17T21:13:51,629 adding 'pysb/util.py' 2021-03-17T21:13:51,632 adding 'pysb/examples/__init__.py' 2021-03-17T21:13:51,633 adding 'pysb/examples/bax_pore.py' 2021-03-17T21:13:51,634 adding 'pysb/examples/bax_pore_sequential.py' 2021-03-17T21:13:51,636 adding 'pysb/examples/bngwiki_egfr_simple.py' 2021-03-17T21:13:51,637 adding 'pysb/examples/bngwiki_enzymatic_cycle_mm.py' 2021-03-17T21:13:51,638 adding 'pysb/examples/bngwiki_simple.py' 2021-03-17T21:13:51,640 adding 'pysb/examples/earm_1_0.py' 2021-03-17T21:13:51,642 adding 'pysb/examples/earm_1_3.py' 2021-03-17T21:13:51,644 adding 'pysb/examples/explicit.py' 2021-03-17T21:13:51,645 adding 'pysb/examples/expression_observables.py' 2021-03-17T21:13:51,646 adding 'pysb/examples/fixed_initial.py' 2021-03-17T21:13:51,648 adding 'pysb/examples/fricker_2010_apoptosis.py' 2021-03-17T21:13:51,650 adding 'pysb/examples/hello_pysb.py' 2021-03-17T21:13:51,651 adding 'pysb/examples/kinase_cascade.py' 2021-03-17T21:13:51,653 adding 'pysb/examples/localfunc.py' 2021-03-17T21:13:51,654 adding 'pysb/examples/michment.py' 2021-03-17T21:13:51,655 adding 'pysb/examples/move_connected.py' 2021-03-17T21:13:51,657 adding 'pysb/examples/robertson.py' 2021-03-17T21:13:51,658 adding 'pysb/examples/run_bax_pore.py' 2021-03-17T21:13:51,660 adding 'pysb/examples/run_bax_pore_sequential.py' 2021-03-17T21:13:51,661 adding 'pysb/examples/run_bng_ssa_example.py' 2021-03-17T21:13:51,662 adding 'pysb/examples/run_earm_1_0.py' 2021-03-17T21:13:51,664 adding 'pysb/examples/run_earm_hpp.py' 2021-03-17T21:13:51,665 adding 'pysb/examples/run_earm_stochkit.py' 2021-03-17T21:13:51,666 adding 'pysb/examples/run_fixed_initial.py' 2021-03-17T21:13:51,668 adding 'pysb/examples/run_kinase_cascade.py' 2021-03-17T21:13:51,669 adding 'pysb/examples/run_michment.py' 2021-03-17T21:13:51,671 adding 'pysb/examples/run_robertson.py' 2021-03-17T21:13:51,672 adding 'pysb/examples/run_tutorial_a.py' 2021-03-17T21:13:51,673 adding 'pysb/examples/run_tyson_oscillator.py' 2021-03-17T21:13:51,675 adding 'pysb/examples/run_tyson_oscillator_stochkit.py' 2021-03-17T21:13:51,676 adding 'pysb/examples/synth_deg.py' 2021-03-17T21:13:51,677 adding 'pysb/examples/tutorial_a.py' 2021-03-17T21:13:51,678 adding 'pysb/examples/tutorial_b.py' 2021-03-17T21:13:51,679 adding 'pysb/examples/tutorial_c.py' 2021-03-17T21:13:51,681 adding 'pysb/examples/tyson_oscillator.py' 2021-03-17T21:13:51,683 adding 'pysb/export/__init__.py' 2021-03-17T21:13:51,685 adding 'pysb/export/__main__.py' 2021-03-17T21:13:51,686 adding 'pysb/export/bng_net.py' 2021-03-17T21:13:51,687 adding 'pysb/export/bngl.py' 2021-03-17T21:13:51,689 adding 'pysb/export/json.py' 2021-03-17T21:13:51,691 adding 'pysb/export/kappa.py' 2021-03-17T21:13:51,693 adding 'pysb/export/mathematica.py' 2021-03-17T21:13:51,695 adding 'pysb/export/matlab.py' 2021-03-17T21:13:51,697 adding 'pysb/export/potterswheel.py' 2021-03-17T21:13:51,699 adding 'pysb/export/pysb_flat.py' 2021-03-17T21:13:51,701 adding 'pysb/export/python.py' 2021-03-17T21:13:51,703 adding 'pysb/export/sbml.py' 2021-03-17T21:13:51,705 adding 'pysb/export/stochkit.py' 2021-03-17T21:13:51,707 adding 'pysb/generator/__init__.py' 2021-03-17T21:13:51,710 adding 'pysb/generator/bng.py' 2021-03-17T21:13:51,712 adding 'pysb/generator/kappa.py' 2021-03-17T21:13:51,714 adding 'pysb/importers/__init__.py' 2021-03-17T21:13:51,717 adding 'pysb/importers/bngl.py' 2021-03-17T21:13:51,719 adding 'pysb/importers/json.py' 2021-03-17T21:13:51,721 adding 'pysb/importers/kappa.py' 2021-03-17T21:13:51,723 adding 'pysb/importers/sbml.py' 2021-03-17T21:13:51,725 adding 'pysb/simulator/__init__.py' 2021-03-17T21:13:51,733 adding 'pysb/simulator/base.py' 2021-03-17T21:13:51,735 adding 'pysb/simulator/bng.py' 2021-03-17T21:13:51,739 adding 'pysb/simulator/cupsoda.py' 2021-03-17T21:13:51,741 adding 'pysb/simulator/kappa.py' 2021-03-17T21:13:51,746 adding 'pysb/simulator/scipyode.py' 2021-03-17T21:13:51,749 adding 'pysb/simulator/stochkit.py' 2021-03-17T21:13:51,751 adding 'pysb/testing/__init__.py' 2021-03-17T21:13:51,753 adding 'pysb/testing/modeltests.py' 2021-03-17T21:13:51,756 adding 'pysb/tests/__init__.py' 2021-03-17T21:13:51,757 adding 'pysb/tests/jacobian_runtimes.py' 2021-03-17T21:13:51,759 adding 'pysb/tests/test_bng.py' 2021-03-17T21:13:51,762 adding 'pysb/tests/test_core.py' 2021-03-17T21:13:51,763 adding 'pysb/tests/test_examples.py' 2021-03-17T21:13:51,765 adding 'pysb/tests/test_exporters.py' 2021-03-17T21:13:51,766 adding 'pysb/tests/test_expressions.py' 2021-03-17T21:13:51,767 adding 'pysb/tests/test_importer_kappa.py' 2021-03-17T21:13:51,769 adding 'pysb/tests/test_importers.py' 2021-03-17T21:13:51,771 adding 'pysb/tests/test_integrate.py' 2021-03-17T21:13:51,773 adding 'pysb/tests/test_kappa.py' 2021-03-17T21:13:51,774 adding 'pysb/tests/test_local_only.py' 2021-03-17T21:13:51,775 adding 'pysb/tests/test_macros.py' 2021-03-17T21:13:51,776 adding 'pysb/tests/test_merge.py' 2021-03-17T21:13:51,778 adding 'pysb/tests/test_pattern.py' 2021-03-17T21:13:51,780 adding 'pysb/tests/test_sensitivity_analysis.py' 2021-03-17T21:13:51,782 adding 'pysb/tests/test_simulationresult.py' 2021-03-17T21:13:51,783 adding 'pysb/tests/test_simulator_bng.py' 2021-03-17T21:13:51,785 adding 'pysb/tests/test_simulator_cupsoda.py' 2021-03-17T21:13:51,786 adding 'pysb/tests/test_simulator_kappa.py' 2021-03-17T21:13:51,789 adding 'pysb/tests/test_simulator_scipy.py' 2021-03-17T21:13:51,791 adding 'pysb/tests/test_simulator_stochkit.py' 2021-03-17T21:13:51,792 adding 'pysb/tests/test_util.py' 2021-03-17T21:13:51,794 adding 'pysb/tools/__init__.py' 2021-03-17T21:13:51,796 adding 'pysb/tools/render_reactions.py' 2021-03-17T21:13:51,797 adding 'pysb/tools/render_species.py' 2021-03-17T21:13:51,801 adding 'pysb/tools/sensitivity_analysis.py' 2021-03-17T21:13:51,803 adding 'pysb/tools/species_graph.py' 2021-03-17T21:13:51,806 adding 'pysb-1.12.0.data/scripts/pysb_export' 2021-03-17T21:13:51,808 adding 'pysb-1.12.0.dist-info/LICENSE.txt' 2021-03-17T21:13:51,809 adding 'pysb-1.12.0.dist-info/METADATA' 2021-03-17T21:13:51,810 adding 'pysb-1.12.0.dist-info/WHEEL' 2021-03-17T21:13:51,811 adding 'pysb-1.12.0.dist-info/top_level.txt' 2021-03-17T21:13:51,813 adding 'pysb-1.12.0.dist-info/RECORD' 2021-03-17T21:13:51,820 removing build/bdist.linux-armv7l/wheel 2021-03-17T21:13:51,937 Building wheel for pysb (setup.py): finished with status 'done' 2021-03-17T21:13:51,942 Created wheel for pysb: filename=pysb-1.12.0-py3-none-any.whl size=266145 sha256=1c874f59847f7c63224072659371d19c4075f1c893141c79f93b631aa2c7237c 2021-03-17T21:13:51,942 Stored in directory: /tmp/pip-ephem-wheel-cache-5hzak8ky/wheels/a1/b2/de/4daa7b2534aeea7820a007c0932cb6ef8072648b07b35650a3 2021-03-17T21:13:51,955 Successfully built pysb 2021-03-17T21:13:51,968 Removed build tracker: '/tmp/pip-req-tracker-4m47c21i'