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https://files.pythonhosted.org/packages/d8/23/2d8a77861f1c1e066a6d8edc217c9217641a6e7ca5cdd5539ccd1b6ab8b9/jcvi-1.0.14.tar.gz#sha256=2fda3b5e0dc9dcf0fb30578033d9274a99723b54ce6e514936f9dbd2c872f626 (from https://pypi.org/simple/jcvi/), version: 1.0.14 2021-03-21T04:36:46,940 Found link https://files.pythonhosted.org/packages/74/c8/e384f7963f349e571795468fbabf451aa903825736fde6e9d3474c238463/jcvi-1.1.1.tar.gz#sha256=ad22b0efeeb8d9fa3e9a66871b796f6fc2072e4cb48491f5b18602e585b468bb (from https://pypi.org/simple/jcvi/), version: 1.1.1 2021-03-21T04:36:46,941 Found link https://files.pythonhosted.org/packages/8f/06/0a6cdc66e7ef36c658c8867b0573c72aa7b2394759a69ed9aa5d64aa2f51/jcvi-1.1.2.tar.gz#sha256=82c914195ac82b3770bce0e0754671871a139c5c4c52158ae4723ec76c975194 (from https://pypi.org/simple/jcvi/), version: 1.1.2 2021-03-21T04:36:46,941 Found link https://files.pythonhosted.org/packages/f3/4d/90ec025ffba6064f62d2480deebee2096b1c581484f5deb807081f68b826/jcvi-1.1.3.tar.gz#sha256=bff23cbdfa634dd22beff778e7405d509414d3a98b7531397b03db3e0f7037e5 (from https://pypi.org/simple/jcvi/), version: 1.1.3 2021-03-21T04:36:46,941 Found link https://files.pythonhosted.org/packages/aa/77/af2e6dbb516a39b09f908e85b2e1f52c8003bcf822f59434b1241da7d057/jcvi-1.1.4.tar.gz#sha256=de96b414804a5a9884845cc5923e6772339ea86b3aae40d02841e59944ce1777 (from https://pypi.org/simple/jcvi/), version: 1.1.4 2021-03-21T04:36:46,942 Found link https://files.pythonhosted.org/packages/32/89/5d32094c25a676e1d43eec6c4cc8f6eeef77f939286faece04986ef491bd/jcvi-1.1.5.tar.gz#sha256=9879ca50acfbc2f42afd26a7c211ae3653edfc70fcafa4848985c215a51dbe0b (from https://pypi.org/simple/jcvi/), version: 1.1.5 2021-03-21T04:36:46,942 Found link https://files.pythonhosted.org/packages/31/b4/f7d533c9099a7be91b964685e2d86f1986e25c45c6ec7174528f95d4c732/jcvi-1.1.6.tar.gz#sha256=c3a54f22140e4e3962f3cb05a5d9c47952d48b67d0459bf499193828018255a3 (from https://pypi.org/simple/jcvi/), version: 1.1.6 2021-03-21T04:36:46,942 Found link https://files.pythonhosted.org/packages/01/be/3ae008ee2b3a53b46f8953bbaf1c5372b5faaf790ee7c5813201d50fbdaf/jcvi-1.1.7.tar.gz#sha256=2709f0e2420da0f9d5a5da581f8f19bd54d7bb9a9720f0d0e9141f30e84b5ab2 (from https://pypi.org/simple/jcvi/), version: 1.1.7 2021-03-21T04:36:46,942 Found link https://files.pythonhosted.org/packages/01/54/44acf2550250a12ea505f2b4be565357d06bdc87d7ea575f955ae98e9700/jcvi-1.1.8.tar.gz#sha256=8d4ce6586068e6a2fa6e39303f5dab1b6f068a1335be09e2488c5f9387685228 (from https://pypi.org/simple/jcvi/), version: 1.1.8 2021-03-21T04:36:46,943 Found link https://files.pythonhosted.org/packages/f8/da/21a544f6e7177504462669d1d882703c9d189aa18acfe4fb7ae28f541b12/jcvi-1.1.9.tar.gz#sha256=9711e6c5dec2436a4f712385ee165051e6c60c07f2ab0e2984e1139874879c77 (from https://pypi.org/simple/jcvi/), version: 1.1.9 2021-03-21T04:36:46,943 Found link https://files.pythonhosted.org/packages/46/fb/a76158690f188e05a01327bd64d100c8604b752811942f7d387ae6ed52eb/jcvi-1.1.10.tar.gz#sha256=02340bff4e25d38e975e64add2cecfbedc262855567e2a571d0519b13f884e9a (from https://pypi.org/simple/jcvi/), version: 1.1.10 2021-03-21T04:36:46,965 Given no hashes to check 1 links for project 'jcvi': discarding no candidates 2021-03-21T04:36:46,980 Collecting jcvi==1.1.10 2021-03-21T04:36:46,982 Created temporary directory: /tmp/pip-unpack-3k1l1s7d 2021-03-21T04:36:47,026 Downloading jcvi-1.1.10.tar.gz (819 kB) 2021-03-21T04:36:47,838 Added jcvi==1.1.10 from https://files.pythonhosted.org/packages/46/fb/a76158690f188e05a01327bd64d100c8604b752811942f7d387ae6ed52eb/jcvi-1.1.10.tar.gz#sha256=02340bff4e25d38e975e64add2cecfbedc262855567e2a571d0519b13f884e9a to build tracker '/tmp/pip-req-tracker-18si1zyn' 2021-03-21T04:36:47,839 Running setup.py (path:/tmp/pip-wheel-s24yik4n/jcvi_17c4f28c15c04df7b7a7517ca0e2215f/setup.py) egg_info for package jcvi 2021-03-21T04:36:47,840 Created temporary directory: /tmp/pip-pip-egg-info-a5rk3jrp 2021-03-21T04:36:47,841 Running command python setup.py egg_info 2021-03-21T04:36:49,779 running egg_info 2021-03-21T04:36:49,781 creating /tmp/pip-pip-egg-info-a5rk3jrp/jcvi.egg-info 2021-03-21T04:36:49,782 writing /tmp/pip-pip-egg-info-a5rk3jrp/jcvi.egg-info/PKG-INFO 2021-03-21T04:36:49,787 writing dependency_links to /tmp/pip-pip-egg-info-a5rk3jrp/jcvi.egg-info/dependency_links.txt 2021-03-21T04:36:49,789 writing requirements to /tmp/pip-pip-egg-info-a5rk3jrp/jcvi.egg-info/requires.txt 2021-03-21T04:36:49,790 writing top-level names to /tmp/pip-pip-egg-info-a5rk3jrp/jcvi.egg-info/top_level.txt 2021-03-21T04:36:49,792 writing manifest file '/tmp/pip-pip-egg-info-a5rk3jrp/jcvi.egg-info/SOURCES.txt' 2021-03-21T04:36:49,819 reading manifest file '/tmp/pip-pip-egg-info-a5rk3jrp/jcvi.egg-info/SOURCES.txt' 2021-03-21T04:36:49,821 reading manifest template 'MANIFEST.in' 2021-03-21T04:36:49,833 writing manifest file '/tmp/pip-pip-egg-info-a5rk3jrp/jcvi.egg-info/SOURCES.txt' 2021-03-21T04:36:49,835 /usr/local/lib/python3.7/dist-packages/setuptools/dist.py:461: UserWarning: Normalizing 'v1.1.10' to '1.1.10' 2021-03-21T04:36:49,835 warnings.warn(tmpl.format(**locals())) 2021-03-21T04:36:49,929 Source in /tmp/pip-wheel-s24yik4n/jcvi_17c4f28c15c04df7b7a7517ca0e2215f has version 1.1.10, which satisfies requirement jcvi==1.1.10 from https://files.pythonhosted.org/packages/46/fb/a76158690f188e05a01327bd64d100c8604b752811942f7d387ae6ed52eb/jcvi-1.1.10.tar.gz#sha256=02340bff4e25d38e975e64add2cecfbedc262855567e2a571d0519b13f884e9a 2021-03-21T04:36:49,931 Removed jcvi==1.1.10 from https://files.pythonhosted.org/packages/46/fb/a76158690f188e05a01327bd64d100c8604b752811942f7d387ae6ed52eb/jcvi-1.1.10.tar.gz#sha256=02340bff4e25d38e975e64add2cecfbedc262855567e2a571d0519b13f884e9a from build tracker '/tmp/pip-req-tracker-18si1zyn' 2021-03-21T04:36:49,936 Created temporary directory: /tmp/pip-unpack-ru6x53s_ 2021-03-21T04:36:49,936 Building wheels for collected packages: jcvi 2021-03-21T04:36:49,941 Created temporary directory: /tmp/pip-wheel-1zivvh70 2021-03-21T04:36:49,942 Building wheel for jcvi (setup.py): started 2021-03-21T04:36:49,942 Destination directory: /tmp/pip-wheel-1zivvh70 2021-03-21T04:36:49,942 Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-s24yik4n/jcvi_17c4f28c15c04df7b7a7517ca0e2215f/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-s24yik4n/jcvi_17c4f28c15c04df7b7a7517ca0e2215f/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-1zivvh70 2021-03-21T04:36:51,446 /usr/local/lib/python3.7/dist-packages/setuptools/dist.py:461: UserWarning: Normalizing 'v1.1.10' to '1.1.10' 2021-03-21T04:36:51,447 warnings.warn(tmpl.format(**locals())) 2021-03-21T04:36:51,508 running bdist_wheel 2021-03-21T04:36:51,513 running build 2021-03-21T04:36:51,513 running build_py 2021-03-21T04:36:51,519 creating build 2021-03-21T04:36:51,520 creating build/lib.linux-armv7l-3.7 2021-03-21T04:36:51,520 creating build/lib.linux-armv7l-3.7/jcvi 2021-03-21T04:36:51,522 copying jcvi/__init__.py -> build/lib.linux-armv7l-3.7/jcvi 2021-03-21T04:36:51,524 copying jcvi/_version.py -> build/lib.linux-armv7l-3.7/jcvi 2021-03-21T04:36:51,527 creating build/lib.linux-armv7l-3.7/jcvi/algorithms 2021-03-21T04:36:51,528 copying jcvi/algorithms/__init__.py -> build/lib.linux-armv7l-3.7/jcvi/algorithms 2021-03-21T04:36:51,530 copying jcvi/algorithms/__main__.py -> build/lib.linux-armv7l-3.7/jcvi/algorithms 2021-03-21T04:36:51,532 copying jcvi/algorithms/maxsum.py -> build/lib.linux-armv7l-3.7/jcvi/algorithms 2021-03-21T04:36:51,535 copying jcvi/algorithms/lpsolve.py -> build/lib.linux-armv7l-3.7/jcvi/algorithms 2021-03-21T04:36:51,538 copying jcvi/algorithms/formula.py -> build/lib.linux-armv7l-3.7/jcvi/algorithms 2021-03-21T04:36:51,541 copying jcvi/algorithms/matrix.py -> build/lib.linux-armv7l-3.7/jcvi/algorithms 2021-03-21T04:36:51,544 copying jcvi/algorithms/ml.py -> build/lib.linux-armv7l-3.7/jcvi/algorithms 2021-03-21T04:36:51,546 copying jcvi/algorithms/supermap.py -> build/lib.linux-armv7l-3.7/jcvi/algorithms 2021-03-21T04:36:51,549 copying jcvi/algorithms/tsp.py -> build/lib.linux-armv7l-3.7/jcvi/algorithms 2021-03-21T04:36:51,552 copying jcvi/algorithms/ec.py -> build/lib.linux-armv7l-3.7/jcvi/algorithms 2021-03-21T04:36:51,555 copying jcvi/algorithms/graph.py -> build/lib.linux-armv7l-3.7/jcvi/algorithms 2021-03-21T04:36:51,558 copying jcvi/algorithms/lis.py -> build/lib.linux-armv7l-3.7/jcvi/algorithms 2021-03-21T04:36:51,562 creating build/lib.linux-armv7l-3.7/jcvi/assembly 2021-03-21T04:36:51,564 copying jcvi/assembly/hic.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-03-21T04:36:51,568 copying jcvi/assembly/automaton.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-03-21T04:36:51,572 copying jcvi/assembly/base.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-03-21T04:36:51,574 copying jcvi/assembly/pbjelly.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-03-21T04:36:51,577 copying jcvi/assembly/syntenypath.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-03-21T04:36:51,580 copying jcvi/assembly/unitig.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-03-21T04:36:51,583 copying jcvi/assembly/gaps.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-03-21T04:36:51,586 copying jcvi/assembly/__init__.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-03-21T04:36:51,588 copying jcvi/assembly/soap.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-03-21T04:36:51,591 copying jcvi/assembly/meraculous.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-03-21T04:36:51,593 copying jcvi/assembly/sim.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-03-21T04:36:51,596 copying jcvi/assembly/__main__.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-03-21T04:36:51,598 copying jcvi/assembly/ca.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-03-21T04:36:51,601 copying jcvi/assembly/bambus.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-03-21T04:36:51,604 copying jcvi/assembly/allmaps.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-03-21T04:36:51,608 copying jcvi/assembly/kmer.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-03-21T04:36:51,611 copying jcvi/assembly/postprocess.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-03-21T04:36:51,614 copying jcvi/assembly/geneticmap.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-03-21T04:36:51,617 copying jcvi/assembly/patch.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-03-21T04:36:51,620 copying jcvi/assembly/sspace.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-03-21T04:36:51,622 copying jcvi/assembly/goldenpath.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-03-21T04:36:51,626 copying jcvi/assembly/amos.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-03-21T04:36:51,628 copying jcvi/assembly/preprocess.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-03-21T04:36:51,631 copying jcvi/assembly/trinity.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-03-21T04:36:51,634 copying jcvi/assembly/allpaths.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-03-21T04:36:51,636 copying jcvi/assembly/opticalmap.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-03-21T04:36:51,639 copying jcvi/assembly/coverage.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-03-21T04:36:51,643 creating build/lib.linux-armv7l-3.7/jcvi/formats 2021-03-21T04:36:51,644 copying jcvi/formats/psl.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-03-21T04:36:51,647 copying jcvi/formats/pyblast.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-03-21T04:36:51,650 copying jcvi/formats/pdf.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-03-21T04:36:51,652 copying jcvi/formats/base.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-03-21T04:36:51,655 copying jcvi/formats/__init__.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-03-21T04:36:51,657 copying jcvi/formats/html.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-03-21T04:36:51,659 copying jcvi/formats/ace.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-03-21T04:36:51,662 copying jcvi/formats/__main__.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-03-21T04:36:51,664 copying jcvi/formats/cdt.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-03-21T04:36:51,666 copying jcvi/formats/fpc.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-03-21T04:36:51,668 copying jcvi/formats/contig.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-03-21T04:36:51,671 copying jcvi/formats/chain.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-03-21T04:36:51,673 copying jcvi/formats/fastq.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-03-21T04:36:51,676 copying jcvi/formats/coords.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-03-21T04:36:51,679 copying jcvi/formats/paf.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-03-21T04:36:51,681 copying jcvi/formats/obo.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-03-21T04:36:51,683 copying jcvi/formats/agp.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-03-21T04:36:51,688 copying jcvi/formats/sbt.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-03-21T04:36:51,691 copying jcvi/formats/genbank.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-03-21T04:36:51,694 copying jcvi/formats/excel.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-03-21T04:36:51,696 copying jcvi/formats/blast.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-03-21T04:36:51,700 copying jcvi/formats/maf.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-03-21T04:36:51,702 copying jcvi/formats/btab.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-03-21T04:36:51,705 copying jcvi/formats/bed.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-03-21T04:36:51,709 copying jcvi/formats/sam.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-03-21T04:36:51,713 copying jcvi/formats/sizes.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-03-21T04:36:51,715 copying jcvi/formats/gff.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-03-21T04:36:51,722 copying jcvi/formats/posmap.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-03-21T04:36:51,725 copying jcvi/formats/fasta.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-03-21T04:36:51,730 copying jcvi/formats/vcf.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-03-21T04:36:51,734 creating build/lib.linux-armv7l-3.7/jcvi/variation 2021-03-21T04:36:51,735 copying jcvi/variation/__init__.py -> build/lib.linux-armv7l-3.7/jcvi/variation 2021-03-21T04:36:51,737 copying jcvi/variation/tassel.py -> build/lib.linux-armv7l-3.7/jcvi/variation 2021-03-21T04:36:51,740 copying jcvi/variation/__main__.py -> build/lib.linux-armv7l-3.7/jcvi/variation 2021-03-21T04:36:51,742 copying jcvi/variation/deconvolute.py -> build/lib.linux-armv7l-3.7/jcvi/variation 2021-03-21T04:36:51,744 copying jcvi/variation/delly.py -> build/lib.linux-armv7l-3.7/jcvi/variation 2021-03-21T04:36:51,746 copying jcvi/variation/phase.py -> build/lib.linux-armv7l-3.7/jcvi/variation 2021-03-21T04:36:51,749 copying jcvi/variation/impute.py -> build/lib.linux-armv7l-3.7/jcvi/variation 2021-03-21T04:36:51,751 copying jcvi/variation/str.py -> build/lib.linux-armv7l-3.7/jcvi/variation 2021-03-21T04:36:51,755 copying jcvi/variation/cnv.py -> build/lib.linux-armv7l-3.7/jcvi/variation 2021-03-21T04:36:51,758 copying jcvi/variation/snp.py -> build/lib.linux-armv7l-3.7/jcvi/variation 2021-03-21T04:36:51,763 creating build/lib.linux-armv7l-3.7/jcvi/annotation 2021-03-21T04:36:51,764 copying jcvi/annotation/maker.py -> build/lib.linux-armv7l-3.7/jcvi/annotation 2021-03-21T04:36:51,767 copying jcvi/annotation/automaton.py -> build/lib.linux-armv7l-3.7/jcvi/annotation 2021-03-21T04:36:51,770 copying jcvi/annotation/ahrd.py -> build/lib.linux-armv7l-3.7/jcvi/annotation 2021-03-21T04:36:51,773 copying jcvi/annotation/__init__.py -> build/lib.linux-armv7l-3.7/jcvi/annotation 2021-03-21T04:36:51,775 copying jcvi/annotation/__main__.py -> build/lib.linux-armv7l-3.7/jcvi/annotation 2021-03-21T04:36:51,778 copying jcvi/annotation/stats.py -> build/lib.linux-armv7l-3.7/jcvi/annotation 2021-03-21T04:36:51,781 copying jcvi/annotation/pasa.py -> build/lib.linux-armv7l-3.7/jcvi/annotation 2021-03-21T04:36:51,784 copying jcvi/annotation/depth.py -> build/lib.linux-armv7l-3.7/jcvi/annotation 2021-03-21T04:36:51,787 copying jcvi/annotation/train.py -> build/lib.linux-armv7l-3.7/jcvi/annotation 2021-03-21T04:36:51,790 copying jcvi/annotation/reformat.py -> build/lib.linux-armv7l-3.7/jcvi/annotation 2021-03-21T04:36:51,794 copying jcvi/annotation/evm.py -> build/lib.linux-armv7l-3.7/jcvi/annotation 2021-03-21T04:36:51,796 copying jcvi/annotation/qc.py -> build/lib.linux-armv7l-3.7/jcvi/annotation 2021-03-21T04:36:51,801 creating build/lib.linux-armv7l-3.7/jcvi/apps 2021-03-21T04:36:51,803 copying jcvi/apps/gmap.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-03-21T04:36:51,806 copying jcvi/apps/base.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-03-21T04:36:51,810 copying jcvi/apps/uclust.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-03-21T04:36:51,814 copying jcvi/apps/r.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-03-21T04:36:51,816 copying jcvi/apps/__init__.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-03-21T04:36:51,818 copying jcvi/apps/script.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-03-21T04:36:51,820 copying jcvi/apps/bwa.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-03-21T04:36:51,823 copying jcvi/apps/fetch.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-03-21T04:36:51,826 copying jcvi/apps/mask.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-03-21T04:36:51,828 copying jcvi/apps/lastz.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-03-21T04:36:51,831 copying jcvi/apps/cdhit.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-03-21T04:36:51,833 copying jcvi/apps/__main__.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-03-21T04:36:51,835 copying jcvi/apps/uniprot.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-03-21T04:36:51,838 copying jcvi/apps/blastplus.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-03-21T04:36:51,840 copying jcvi/apps/emboss.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-03-21T04:36:51,843 copying jcvi/apps/align.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-03-21T04:36:51,846 copying jcvi/apps/cap3.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-03-21T04:36:51,848 copying jcvi/apps/bowtie.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-03-21T04:36:51,851 copying jcvi/apps/gbsubmit.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-03-21T04:36:51,854 copying jcvi/apps/grid.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-03-21T04:36:51,857 copying jcvi/apps/phylo.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-03-21T04:36:51,861 copying jcvi/apps/biomart.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-03-21T04:36:51,863 copying jcvi/apps/softlink.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-03-21T04:36:51,866 copying jcvi/apps/ks.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-03-21T04:36:51,869 copying jcvi/apps/restriction.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-03-21T04:36:51,872 copying jcvi/apps/vecscreen.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-03-21T04:36:51,875 creating build/lib.linux-armv7l-3.7/jcvi/utils 2021-03-21T04:36:51,876 copying jcvi/utils/__init__.py -> build/lib.linux-armv7l-3.7/jcvi/utils 2021-03-21T04:36:51,878 copying jcvi/utils/__main__.py -> build/lib.linux-armv7l-3.7/jcvi/utils 2021-03-21T04:36:51,880 copying jcvi/utils/orderedcollections.py -> build/lib.linux-armv7l-3.7/jcvi/utils 2021-03-21T04:36:51,883 copying jcvi/utils/range.py -> build/lib.linux-armv7l-3.7/jcvi/utils 2021-03-21T04:36:51,885 copying jcvi/utils/grouper.py -> build/lib.linux-armv7l-3.7/jcvi/utils 2021-03-21T04:36:51,887 copying jcvi/utils/db.py -> build/lib.linux-armv7l-3.7/jcvi/utils 2021-03-21T04:36:51,890 copying jcvi/utils/table.py -> build/lib.linux-armv7l-3.7/jcvi/utils 2021-03-21T04:36:51,892 copying jcvi/utils/console.py -> build/lib.linux-armv7l-3.7/jcvi/utils 2021-03-21T04:36:51,894 copying jcvi/utils/aws.py -> build/lib.linux-armv7l-3.7/jcvi/utils 2021-03-21T04:36:51,897 copying jcvi/utils/webcolors.py -> build/lib.linux-armv7l-3.7/jcvi/utils 2021-03-21T04:36:51,899 copying jcvi/utils/cbook.py -> build/lib.linux-armv7l-3.7/jcvi/utils 2021-03-21T04:36:51,902 copying jcvi/utils/taxonomy.py -> build/lib.linux-armv7l-3.7/jcvi/utils 2021-03-21T04:36:51,905 copying jcvi/utils/ez_setup.py -> build/lib.linux-armv7l-3.7/jcvi/utils 2021-03-21T04:36:51,909 creating build/lib.linux-armv7l-3.7/jcvi/compara 2021-03-21T04:36:51,910 copying jcvi/compara/pad.py -> build/lib.linux-armv7l-3.7/jcvi/compara 2021-03-21T04:36:51,913 copying jcvi/compara/__init__.py -> build/lib.linux-armv7l-3.7/jcvi/compara 2021-03-21T04:36:51,915 copying jcvi/compara/fractionation.py -> build/lib.linux-armv7l-3.7/jcvi/compara 2021-03-21T04:36:51,918 copying jcvi/compara/__main__.py -> build/lib.linux-armv7l-3.7/jcvi/compara 2021-03-21T04:36:51,921 copying jcvi/compara/synteny.py -> build/lib.linux-armv7l-3.7/jcvi/compara 2021-03-21T04:36:51,925 copying jcvi/compara/quota.py -> build/lib.linux-armv7l-3.7/jcvi/compara 2021-03-21T04:36:51,927 copying jcvi/compara/blastfilter.py -> build/lib.linux-armv7l-3.7/jcvi/compara 2021-03-21T04:36:51,930 copying jcvi/compara/reconstruct.py -> build/lib.linux-armv7l-3.7/jcvi/compara 2021-03-21T04:36:51,932 copying jcvi/compara/synfind.py -> build/lib.linux-armv7l-3.7/jcvi/compara 2021-03-21T04:36:51,935 copying jcvi/compara/catalog.py -> build/lib.linux-armv7l-3.7/jcvi/compara 2021-03-21T04:36:51,938 copying jcvi/compara/phylogeny.py -> build/lib.linux-armv7l-3.7/jcvi/compara 2021-03-21T04:36:51,942 creating build/lib.linux-armv7l-3.7/jcvi/projects 2021-03-21T04:36:51,943 copying jcvi/projects/misc.py -> build/lib.linux-armv7l-3.7/jcvi/projects 2021-03-21T04:36:51,945 copying jcvi/projects/__init__.py -> build/lib.linux-armv7l-3.7/jcvi/projects 2021-03-21T04:36:51,947 copying jcvi/projects/age.py -> build/lib.linux-armv7l-3.7/jcvi/projects 2021-03-21T04:36:51,950 copying jcvi/projects/pistachio.py -> build/lib.linux-armv7l-3.7/jcvi/projects 2021-03-21T04:36:51,952 copying jcvi/projects/vanilla.py -> build/lib.linux-armv7l-3.7/jcvi/projects 2021-03-21T04:36:51,955 copying jcvi/projects/__main__.py -> build/lib.linux-armv7l-3.7/jcvi/projects 2021-03-21T04:36:51,957 copying jcvi/projects/pineapple.py -> build/lib.linux-armv7l-3.7/jcvi/projects 2021-03-21T04:36:51,960 copying jcvi/projects/bites.py -> build/lib.linux-armv7l-3.7/jcvi/projects 2021-03-21T04:36:51,962 copying jcvi/projects/tgbs.py -> build/lib.linux-armv7l-3.7/jcvi/projects 2021-03-21T04:36:51,965 copying jcvi/projects/allmaps.py -> build/lib.linux-armv7l-3.7/jcvi/projects 2021-03-21T04:36:51,968 copying jcvi/projects/str.py -> build/lib.linux-armv7l-3.7/jcvi/projects 2021-03-21T04:36:51,973 copying jcvi/projects/heterosis.py -> build/lib.linux-armv7l-3.7/jcvi/projects 2021-03-21T04:36:51,975 copying jcvi/projects/sugarcane.py -> build/lib.linux-armv7l-3.7/jcvi/projects 2021-03-21T04:36:51,978 copying jcvi/projects/napus.py -> build/lib.linux-armv7l-3.7/jcvi/projects 2021-03-21T04:36:51,981 copying jcvi/projects/synfind.py -> build/lib.linux-armv7l-3.7/jcvi/projects 2021-03-21T04:36:51,984 copying jcvi/projects/alfalfa.py -> build/lib.linux-armv7l-3.7/jcvi/projects 2021-03-21T04:36:51,986 copying jcvi/projects/ies.py -> build/lib.linux-armv7l-3.7/jcvi/projects 2021-03-21T04:36:51,990 creating build/lib.linux-armv7l-3.7/jcvi/graphics 2021-03-21T04:36:51,991 copying jcvi/graphics/dotplot.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-03-21T04:36:51,993 copying jcvi/graphics/base.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-03-21T04:36:51,996 copying jcvi/graphics/heatmap.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-03-21T04:36:51,998 copying jcvi/graphics/__init__.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-03-21T04:36:52,000 copying jcvi/graphics/histogram.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-03-21T04:36:52,002 copying jcvi/graphics/wheel.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-03-21T04:36:52,005 copying jcvi/graphics/grabseeds.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-03-21T04:36:52,007 copying jcvi/graphics/__main__.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-03-21T04:36:52,009 copying jcvi/graphics/landscape.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-03-21T04:36:52,013 copying jcvi/graphics/chromosome.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-03-21T04:36:52,015 copying jcvi/graphics/glyph.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-03-21T04:36:52,018 copying jcvi/graphics/align.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-03-21T04:36:52,021 copying jcvi/graphics/synteny.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-03-21T04:36:52,024 copying jcvi/graphics/assembly.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-03-21T04:36:52,027 copying jcvi/graphics/table.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-03-21T04:36:52,030 copying jcvi/graphics/whisker.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-03-21T04:36:52,032 copying jcvi/graphics/logo.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-03-21T04:36:52,034 copying jcvi/graphics/tree.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-03-21T04:36:52,037 copying jcvi/graphics/blastplot.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-03-21T04:36:52,039 copying jcvi/graphics/mummerplot.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-03-21T04:36:52,041 copying jcvi/graphics/graph.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-03-21T04:36:52,043 copying jcvi/graphics/karyotype.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-03-21T04:36:52,046 copying jcvi/graphics/coverage.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-03-21T04:36:52,049 creating build/lib.linux-armv7l-3.7/jcvi/utils/data 2021-03-21T04:36:52,050 copying jcvi/utils/data/__init__.py -> build/lib.linux-armv7l-3.7/jcvi/utils/data 2021-03-21T04:36:52,052 running egg_info 2021-03-21T04:36:52,083 writing jcvi.egg-info/PKG-INFO 2021-03-21T04:36:52,085 writing dependency_links to jcvi.egg-info/dependency_links.txt 2021-03-21T04:36:52,087 writing requirements to jcvi.egg-info/requires.txt 2021-03-21T04:36:52,089 writing top-level names to jcvi.egg-info/top_level.txt 2021-03-21T04:36:52,109 reading manifest file 'jcvi.egg-info/SOURCES.txt' 2021-03-21T04:36:52,115 reading manifest template 'MANIFEST.in' 2021-03-21T04:36:52,131 writing manifest file 'jcvi.egg-info/SOURCES.txt' 2021-03-21T04:36:52,138 copying jcvi/assembly/chic.pyx -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-03-21T04:36:52,141 copying jcvi/formats/cblast.pyx -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-03-21T04:36:52,144 copying jcvi/utils/data/Airswing.ttf -> build/lib.linux-armv7l-3.7/jcvi/utils/data 2021-03-21T04:36:52,147 copying jcvi/utils/data/Collegia.ttf -> build/lib.linux-armv7l-3.7/jcvi/utils/data 2021-03-21T04:36:52,152 copying jcvi/utils/data/HookedUp.ttf -> build/lib.linux-armv7l-3.7/jcvi/utils/data 2021-03-21T04:36:52,156 copying jcvi/utils/data/Humor-Sans.ttf -> build/lib.linux-armv7l-3.7/jcvi/utils/data 2021-03-21T04:36:52,159 copying jcvi/utils/data/TREDs.meta.csv -> build/lib.linux-armv7l-3.7/jcvi/utils/data 2021-03-21T04:36:52,162 copying jcvi/utils/data/adapters.fasta -> build/lib.linux-armv7l-3.7/jcvi/utils/data 2021-03-21T04:36:52,165 copying jcvi/utils/data/blosum80.mat -> build/lib.linux-armv7l-3.7/jcvi/utils/data 2021-03-21T04:36:52,168 copying jcvi/utils/data/chrY.hg38.unique_ccn.gc -> build/lib.linux-armv7l-3.7/jcvi/utils/data 2021-03-21T04:36:52,171 copying jcvi/utils/data/colorchecker.txt -> build/lib.linux-armv7l-3.7/jcvi/utils/data 2021-03-21T04:36:52,174 copying jcvi/utils/data/hg38.band.txt -> build/lib.linux-armv7l-3.7/jcvi/utils/data 2021-03-21T04:36:52,178 copying jcvi/utils/data/hg38.chrom.sizes -> build/lib.linux-armv7l-3.7/jcvi/utils/data 2021-03-21T04:36:52,181 copying jcvi/utils/data/instance.json -> build/lib.linux-armv7l-3.7/jcvi/utils/data 2021-03-21T04:36:52,202 UPDATING build/lib.linux-armv7l-3.7/jcvi/_version.py 2021-03-21T04:36:52,203 set build/lib.linux-armv7l-3.7/jcvi/_version.py to 'v1.1.10' 2021-03-21T04:36:52,204 running build_ext 2021-03-21T04:36:52,273 cythoning jcvi/assembly/chic.pyx to jcvi/assembly/chic.c 2021-03-21T04:36:52,881 /usr/local/lib/python3.7/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-s24yik4n/jcvi_17c4f28c15c04df7b7a7517ca0e2215f/jcvi/assembly/chic.pyx 2021-03-21T04:36:52,881 tree = Parsing.p_module(s, pxd, full_module_name) 2021-03-21T04:36:55,952 cythoning jcvi/formats/cblast.pyx to jcvi/formats/cblast.c 2021-03-21T04:36:55,959 /usr/local/lib/python3.7/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-s24yik4n/jcvi_17c4f28c15c04df7b7a7517ca0e2215f/jcvi/formats/cblast.pyx 2021-03-21T04:36:55,959 tree = Parsing.p_module(s, pxd, full_module_name) 2021-03-21T04:36:57,009 building 'jcvi.assembly.chic' extension 2021-03-21T04:36:57,009 creating build/temp.linux-armv7l-3.7 2021-03-21T04:36:57,010 creating build/temp.linux-armv7l-3.7/jcvi 2021-03-21T04:36:57,011 creating build/temp.linux-armv7l-3.7/jcvi/assembly 2021-03-21T04:36:57,011 arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/lib/python3.7/dist-packages/numpy/core/include -I/usr/include/python3.7m -c jcvi/assembly/chic.c -o build/temp.linux-armv7l-3.7/jcvi/assembly/chic.o -O3 2021-03-21T04:36:57,402 In file included from /usr/local/lib/python3.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1944, 2021-03-21T04:36:57,402 from /usr/local/lib/python3.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2021-03-21T04:36:57,402 from /usr/local/lib/python3.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4, 2021-03-21T04:36:57,403 from jcvi/assembly/chic.c:610: 2021-03-21T04:36:57,403 /usr/local/lib/python3.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2021-03-21T04:36:57,403 #warning "Using deprecated NumPy API, disable it with " \ 2021-03-21T04:36:57,403 ^~~~~~~ 2021-03-21T04:37:01,028 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.7/jcvi/assembly/chic.o -o build/lib.linux-armv7l-3.7/jcvi/assembly/chic.cpython-37m-arm-linux-gnueabihf.so 2021-03-21T04:37:01,182 building 'jcvi.formats.cblast' extension 2021-03-21T04:37:01,183 creating build/temp.linux-armv7l-3.7/jcvi/formats 2021-03-21T04:37:01,183 arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.7m -c jcvi/formats/cblast.c -o build/temp.linux-armv7l-3.7/jcvi/formats/cblast.o -O3 2021-03-21T04:37:08,142 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.7/jcvi/formats/cblast.o -o build/lib.linux-armv7l-3.7/jcvi/formats/cblast.cpython-37m-arm-linux-gnueabihf.so 2021-03-21T04:37:08,335 installing to build/bdist.linux-armv7l/wheel 2021-03-21T04:37:08,335 running install 2021-03-21T04:37:08,337 running install_lib 2021-03-21T04:37:08,342 creating build/bdist.linux-armv7l 2021-03-21T04:37:08,342 creating build/bdist.linux-armv7l/wheel 2021-03-21T04:37:08,344 creating build/bdist.linux-armv7l/wheel/jcvi 2021-03-21T04:37:08,346 copying build/lib.linux-armv7l-3.7/jcvi/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi 2021-03-21T04:37:08,349 creating build/bdist.linux-armv7l/wheel/jcvi/algorithms 2021-03-21T04:37:08,350 copying build/lib.linux-armv7l-3.7/jcvi/algorithms/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2021-03-21T04:37:08,352 copying build/lib.linux-armv7l-3.7/jcvi/algorithms/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2021-03-21T04:37:08,354 copying build/lib.linux-armv7l-3.7/jcvi/algorithms/maxsum.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2021-03-21T04:37:08,356 copying build/lib.linux-armv7l-3.7/jcvi/algorithms/lpsolve.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2021-03-21T04:37:08,360 copying build/lib.linux-armv7l-3.7/jcvi/algorithms/formula.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2021-03-21T04:37:08,363 copying build/lib.linux-armv7l-3.7/jcvi/algorithms/matrix.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2021-03-21T04:37:08,366 copying build/lib.linux-armv7l-3.7/jcvi/algorithms/ml.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2021-03-21T04:37:08,368 copying build/lib.linux-armv7l-3.7/jcvi/algorithms/supermap.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2021-03-21T04:37:08,371 copying build/lib.linux-armv7l-3.7/jcvi/algorithms/tsp.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2021-03-21T04:37:08,375 copying build/lib.linux-armv7l-3.7/jcvi/algorithms/ec.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2021-03-21T04:37:08,379 copying build/lib.linux-armv7l-3.7/jcvi/algorithms/graph.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2021-03-21T04:37:08,382 copying build/lib.linux-armv7l-3.7/jcvi/algorithms/lis.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2021-03-21T04:37:08,387 creating build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-03-21T04:37:08,389 copying build/lib.linux-armv7l-3.7/jcvi/assembly/hic.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-03-21T04:37:08,395 copying build/lib.linux-armv7l-3.7/jcvi/assembly/automaton.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-03-21T04:37:08,398 copying build/lib.linux-armv7l-3.7/jcvi/assembly/base.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-03-21T04:37:08,401 copying build/lib.linux-armv7l-3.7/jcvi/assembly/pbjelly.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-03-21T04:37:08,404 copying build/lib.linux-armv7l-3.7/jcvi/assembly/syntenypath.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-03-21T04:37:08,408 copying build/lib.linux-armv7l-3.7/jcvi/assembly/unitig.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-03-21T04:37:08,411 copying build/lib.linux-armv7l-3.7/jcvi/assembly/gaps.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-03-21T04:37:08,414 copying build/lib.linux-armv7l-3.7/jcvi/assembly/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-03-21T04:37:08,416 copying build/lib.linux-armv7l-3.7/jcvi/assembly/soap.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-03-21T04:37:08,419 copying build/lib.linux-armv7l-3.7/jcvi/assembly/meraculous.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-03-21T04:37:08,422 copying build/lib.linux-armv7l-3.7/jcvi/assembly/sim.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-03-21T04:37:08,425 copying build/lib.linux-armv7l-3.7/jcvi/assembly/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-03-21T04:37:08,428 copying build/lib.linux-armv7l-3.7/jcvi/assembly/ca.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-03-21T04:37:08,432 copying build/lib.linux-armv7l-3.7/jcvi/assembly/chic.pyx -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-03-21T04:37:08,436 copying build/lib.linux-armv7l-3.7/jcvi/assembly/bambus.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-03-21T04:37:08,438 copying build/lib.linux-armv7l-3.7/jcvi/assembly/allmaps.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-03-21T04:37:08,443 copying build/lib.linux-armv7l-3.7/jcvi/assembly/kmer.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-03-21T04:37:08,447 copying build/lib.linux-armv7l-3.7/jcvi/assembly/postprocess.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-03-21T04:37:08,451 copying build/lib.linux-armv7l-3.7/jcvi/assembly/geneticmap.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-03-21T04:37:08,455 copying build/lib.linux-armv7l-3.7/jcvi/assembly/chic.cpython-37m-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-03-21T04:37:08,513 copying build/lib.linux-armv7l-3.7/jcvi/assembly/patch.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-03-21T04:37:08,519 copying build/lib.linux-armv7l-3.7/jcvi/assembly/sspace.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-03-21T04:37:08,523 copying build/lib.linux-armv7l-3.7/jcvi/assembly/goldenpath.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-03-21T04:37:08,527 copying build/lib.linux-armv7l-3.7/jcvi/assembly/amos.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-03-21T04:37:08,531 copying build/lib.linux-armv7l-3.7/jcvi/assembly/preprocess.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-03-21T04:37:08,535 copying build/lib.linux-armv7l-3.7/jcvi/assembly/trinity.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-03-21T04:37:08,538 copying build/lib.linux-armv7l-3.7/jcvi/assembly/allpaths.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-03-21T04:37:08,542 copying build/lib.linux-armv7l-3.7/jcvi/assembly/opticalmap.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-03-21T04:37:08,545 copying build/lib.linux-armv7l-3.7/jcvi/assembly/coverage.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-03-21T04:37:08,550 creating build/bdist.linux-armv7l/wheel/jcvi/formats 2021-03-21T04:37:08,551 copying build/lib.linux-armv7l-3.7/jcvi/formats/psl.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-03-21T04:37:08,554 copying build/lib.linux-armv7l-3.7/jcvi/formats/pyblast.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-03-21T04:37:08,557 copying build/lib.linux-armv7l-3.7/jcvi/formats/pdf.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-03-21T04:37:08,560 copying build/lib.linux-armv7l-3.7/jcvi/formats/base.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-03-21T04:37:08,563 copying build/lib.linux-armv7l-3.7/jcvi/formats/cblast.cpython-37m-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-03-21T04:37:08,581 copying build/lib.linux-armv7l-3.7/jcvi/formats/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-03-21T04:37:08,583 copying build/lib.linux-armv7l-3.7/jcvi/formats/html.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-03-21T04:37:08,586 copying build/lib.linux-armv7l-3.7/jcvi/formats/ace.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-03-21T04:37:08,589 copying build/lib.linux-armv7l-3.7/jcvi/formats/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-03-21T04:37:08,592 copying build/lib.linux-armv7l-3.7/jcvi/formats/cdt.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-03-21T04:37:08,594 copying build/lib.linux-armv7l-3.7/jcvi/formats/fpc.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-03-21T04:37:08,597 copying build/lib.linux-armv7l-3.7/jcvi/formats/contig.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-03-21T04:37:08,600 copying build/lib.linux-armv7l-3.7/jcvi/formats/chain.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-03-21T04:37:08,603 copying build/lib.linux-armv7l-3.7/jcvi/formats/fastq.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-03-21T04:37:08,607 copying build/lib.linux-armv7l-3.7/jcvi/formats/coords.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-03-21T04:37:08,610 copying build/lib.linux-armv7l-3.7/jcvi/formats/paf.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-03-21T04:37:08,613 copying build/lib.linux-armv7l-3.7/jcvi/formats/obo.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-03-21T04:37:08,616 copying build/lib.linux-armv7l-3.7/jcvi/formats/agp.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-03-21T04:37:08,622 copying build/lib.linux-armv7l-3.7/jcvi/formats/sbt.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-03-21T04:37:08,624 copying build/lib.linux-armv7l-3.7/jcvi/formats/genbank.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-03-21T04:37:08,627 copying build/lib.linux-armv7l-3.7/jcvi/formats/cblast.pyx -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-03-21T04:37:08,630 copying build/lib.linux-armv7l-3.7/jcvi/formats/excel.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-03-21T04:37:08,633 copying build/lib.linux-armv7l-3.7/jcvi/formats/blast.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-03-21T04:37:08,637 copying build/lib.linux-armv7l-3.7/jcvi/formats/maf.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-03-21T04:37:08,640 copying build/lib.linux-armv7l-3.7/jcvi/formats/btab.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-03-21T04:37:08,643 copying build/lib.linux-armv7l-3.7/jcvi/formats/bed.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-03-21T04:37:08,648 copying build/lib.linux-armv7l-3.7/jcvi/formats/sam.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-03-21T04:37:08,652 copying build/lib.linux-armv7l-3.7/jcvi/formats/sizes.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-03-21T04:37:08,655 copying build/lib.linux-armv7l-3.7/jcvi/formats/gff.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-03-21T04:37:08,662 copying build/lib.linux-armv7l-3.7/jcvi/formats/posmap.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-03-21T04:37:08,665 copying build/lib.linux-armv7l-3.7/jcvi/formats/fasta.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-03-21T04:37:08,670 copying build/lib.linux-armv7l-3.7/jcvi/formats/vcf.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-03-21T04:37:08,674 creating build/bdist.linux-armv7l/wheel/jcvi/variation 2021-03-21T04:37:08,675 copying build/lib.linux-armv7l-3.7/jcvi/variation/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/variation 2021-03-21T04:37:08,677 copying build/lib.linux-armv7l-3.7/jcvi/variation/tassel.py -> build/bdist.linux-armv7l/wheel/jcvi/variation 2021-03-21T04:37:08,680 copying build/lib.linux-armv7l-3.7/jcvi/variation/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/variation 2021-03-21T04:37:08,682 copying build/lib.linux-armv7l-3.7/jcvi/variation/deconvolute.py -> build/bdist.linux-armv7l/wheel/jcvi/variation 2021-03-21T04:37:08,685 copying build/lib.linux-armv7l-3.7/jcvi/variation/delly.py -> build/bdist.linux-armv7l/wheel/jcvi/variation 2021-03-21T04:37:08,688 copying build/lib.linux-armv7l-3.7/jcvi/variation/phase.py -> build/bdist.linux-armv7l/wheel/jcvi/variation 2021-03-21T04:37:08,690 copying build/lib.linux-armv7l-3.7/jcvi/variation/impute.py -> build/bdist.linux-armv7l/wheel/jcvi/variation 2021-03-21T04:37:08,693 copying build/lib.linux-armv7l-3.7/jcvi/variation/str.py -> build/bdist.linux-armv7l/wheel/jcvi/variation 2021-03-21T04:37:08,698 copying build/lib.linux-armv7l-3.7/jcvi/variation/cnv.py -> build/bdist.linux-armv7l/wheel/jcvi/variation 2021-03-21T04:37:08,703 copying build/lib.linux-armv7l-3.7/jcvi/variation/snp.py -> build/bdist.linux-armv7l/wheel/jcvi/variation 2021-03-21T04:37:08,706 creating build/bdist.linux-armv7l/wheel/jcvi/annotation 2021-03-21T04:37:08,708 copying build/lib.linux-armv7l-3.7/jcvi/annotation/maker.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2021-03-21T04:37:08,711 copying build/lib.linux-armv7l-3.7/jcvi/annotation/automaton.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2021-03-21T04:37:08,714 copying build/lib.linux-armv7l-3.7/jcvi/annotation/ahrd.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2021-03-21T04:37:08,718 copying build/lib.linux-armv7l-3.7/jcvi/annotation/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2021-03-21T04:37:08,720 copying build/lib.linux-armv7l-3.7/jcvi/annotation/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2021-03-21T04:37:08,722 copying build/lib.linux-armv7l-3.7/jcvi/annotation/stats.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2021-03-21T04:37:08,725 copying build/lib.linux-armv7l-3.7/jcvi/annotation/pasa.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2021-03-21T04:37:08,728 copying build/lib.linux-armv7l-3.7/jcvi/annotation/depth.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2021-03-21T04:37:08,731 copying build/lib.linux-armv7l-3.7/jcvi/annotation/train.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2021-03-21T04:37:08,734 copying build/lib.linux-armv7l-3.7/jcvi/annotation/reformat.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2021-03-21T04:37:08,739 copying build/lib.linux-armv7l-3.7/jcvi/annotation/evm.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2021-03-21T04:37:08,742 copying build/lib.linux-armv7l-3.7/jcvi/annotation/qc.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2021-03-21T04:37:08,746 creating build/bdist.linux-armv7l/wheel/jcvi/apps 2021-03-21T04:37:08,747 copying build/lib.linux-armv7l-3.7/jcvi/apps/gmap.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-03-21T04:37:08,750 copying build/lib.linux-armv7l-3.7/jcvi/apps/base.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-03-21T04:37:08,755 copying build/lib.linux-armv7l-3.7/jcvi/apps/uclust.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-03-21T04:37:08,759 copying build/lib.linux-armv7l-3.7/jcvi/apps/r.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-03-21T04:37:08,762 copying build/lib.linux-armv7l-3.7/jcvi/apps/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-03-21T04:37:08,764 copying build/lib.linux-armv7l-3.7/jcvi/apps/script.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-03-21T04:37:08,766 copying build/lib.linux-armv7l-3.7/jcvi/apps/bwa.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-03-21T04:37:08,769 copying build/lib.linux-armv7l-3.7/jcvi/apps/fetch.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-03-21T04:37:08,773 copying build/lib.linux-armv7l-3.7/jcvi/apps/mask.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-03-21T04:37:08,775 copying build/lib.linux-armv7l-3.7/jcvi/apps/lastz.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-03-21T04:37:08,778 copying build/lib.linux-armv7l-3.7/jcvi/apps/cdhit.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-03-21T04:37:08,781 copying build/lib.linux-armv7l-3.7/jcvi/apps/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-03-21T04:37:08,783 copying build/lib.linux-armv7l-3.7/jcvi/apps/uniprot.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-03-21T04:37:08,787 copying build/lib.linux-armv7l-3.7/jcvi/apps/blastplus.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-03-21T04:37:08,790 copying build/lib.linux-armv7l-3.7/jcvi/apps/emboss.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-03-21T04:37:08,792 copying build/lib.linux-armv7l-3.7/jcvi/apps/align.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-03-21T04:37:08,796 copying build/lib.linux-armv7l-3.7/jcvi/apps/cap3.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-03-21T04:37:08,799 copying build/lib.linux-armv7l-3.7/jcvi/apps/bowtie.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-03-21T04:37:08,802 copying build/lib.linux-armv7l-3.7/jcvi/apps/gbsubmit.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-03-21T04:37:08,806 copying build/lib.linux-armv7l-3.7/jcvi/apps/grid.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-03-21T04:37:08,809 copying build/lib.linux-armv7l-3.7/jcvi/apps/phylo.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-03-21T04:37:08,813 copying build/lib.linux-armv7l-3.7/jcvi/apps/biomart.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-03-21T04:37:08,816 copying build/lib.linux-armv7l-3.7/jcvi/apps/softlink.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-03-21T04:37:08,819 copying build/lib.linux-armv7l-3.7/jcvi/apps/ks.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-03-21T04:37:08,824 copying build/lib.linux-armv7l-3.7/jcvi/apps/restriction.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-03-21T04:37:08,827 copying build/lib.linux-armv7l-3.7/jcvi/apps/vecscreen.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-03-21T04:37:08,830 creating build/bdist.linux-armv7l/wheel/jcvi/utils 2021-03-21T04:37:08,831 copying build/lib.linux-armv7l-3.7/jcvi/utils/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-03-21T04:37:08,833 copying build/lib.linux-armv7l-3.7/jcvi/utils/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-03-21T04:37:08,836 copying build/lib.linux-armv7l-3.7/jcvi/utils/orderedcollections.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-03-21T04:37:08,839 copying build/lib.linux-armv7l-3.7/jcvi/utils/range.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-03-21T04:37:08,842 copying build/lib.linux-armv7l-3.7/jcvi/utils/grouper.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-03-21T04:37:08,845 copying build/lib.linux-armv7l-3.7/jcvi/utils/db.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-03-21T04:37:08,849 creating build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-03-21T04:37:08,850 copying build/lib.linux-armv7l-3.7/jcvi/utils/data/colorchecker.txt -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-03-21T04:37:08,853 copying build/lib.linux-armv7l-3.7/jcvi/utils/data/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-03-21T04:37:08,855 copying build/lib.linux-armv7l-3.7/jcvi/utils/data/blosum80.mat -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-03-21T04:37:08,857 copying build/lib.linux-armv7l-3.7/jcvi/utils/data/Humor-Sans.ttf -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-03-21T04:37:08,861 copying build/lib.linux-armv7l-3.7/jcvi/utils/data/TREDs.meta.csv -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-03-21T04:37:08,864 copying build/lib.linux-armv7l-3.7/jcvi/utils/data/Collegia.ttf -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-03-21T04:37:08,870 copying build/lib.linux-armv7l-3.7/jcvi/utils/data/Airswing.ttf -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-03-21T04:37:08,873 copying build/lib.linux-armv7l-3.7/jcvi/utils/data/HookedUp.ttf -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-03-21T04:37:08,877 copying build/lib.linux-armv7l-3.7/jcvi/utils/data/adapters.fasta -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-03-21T04:37:08,879 copying build/lib.linux-armv7l-3.7/jcvi/utils/data/chrY.hg38.unique_ccn.gc -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-03-21T04:37:08,882 copying build/lib.linux-armv7l-3.7/jcvi/utils/data/hg38.band.txt -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-03-21T04:37:08,886 copying build/lib.linux-armv7l-3.7/jcvi/utils/data/instance.json -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-03-21T04:37:08,889 copying build/lib.linux-armv7l-3.7/jcvi/utils/data/hg38.chrom.sizes -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-03-21T04:37:08,892 copying build/lib.linux-armv7l-3.7/jcvi/utils/table.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-03-21T04:37:08,895 copying build/lib.linux-armv7l-3.7/jcvi/utils/console.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-03-21T04:37:08,898 copying build/lib.linux-armv7l-3.7/jcvi/utils/aws.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-03-21T04:37:08,901 copying build/lib.linux-armv7l-3.7/jcvi/utils/webcolors.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-03-21T04:37:08,903 copying build/lib.linux-armv7l-3.7/jcvi/utils/cbook.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-03-21T04:37:08,906 copying build/lib.linux-armv7l-3.7/jcvi/utils/taxonomy.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-03-21T04:37:08,909 copying build/lib.linux-armv7l-3.7/jcvi/utils/ez_setup.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-03-21T04:37:08,912 copying build/lib.linux-armv7l-3.7/jcvi/_version.py -> build/bdist.linux-armv7l/wheel/jcvi 2021-03-21T04:37:08,916 creating build/bdist.linux-armv7l/wheel/jcvi/compara 2021-03-21T04:37:08,917 copying build/lib.linux-armv7l-3.7/jcvi/compara/pad.py -> build/bdist.linux-armv7l/wheel/jcvi/compara 2021-03-21T04:37:08,920 copying build/lib.linux-armv7l-3.7/jcvi/compara/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/compara 2021-03-21T04:37:08,922 copying build/lib.linux-armv7l-3.7/jcvi/compara/fractionation.py -> build/bdist.linux-armv7l/wheel/jcvi/compara 2021-03-21T04:37:08,926 copying build/lib.linux-armv7l-3.7/jcvi/compara/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/compara 2021-03-21T04:37:08,929 copying build/lib.linux-armv7l-3.7/jcvi/compara/synteny.py -> build/bdist.linux-armv7l/wheel/jcvi/compara 2021-03-21T04:37:08,933 copying build/lib.linux-armv7l-3.7/jcvi/compara/quota.py -> build/bdist.linux-armv7l/wheel/jcvi/compara 2021-03-21T04:37:08,936 copying build/lib.linux-armv7l-3.7/jcvi/compara/blastfilter.py -> build/bdist.linux-armv7l/wheel/jcvi/compara 2021-03-21T04:37:08,939 copying build/lib.linux-armv7l-3.7/jcvi/compara/reconstruct.py -> build/bdist.linux-armv7l/wheel/jcvi/compara 2021-03-21T04:37:08,942 copying build/lib.linux-armv7l-3.7/jcvi/compara/synfind.py -> build/bdist.linux-armv7l/wheel/jcvi/compara 2021-03-21T04:37:08,945 copying build/lib.linux-armv7l-3.7/jcvi/compara/catalog.py -> build/bdist.linux-armv7l/wheel/jcvi/compara 2021-03-21T04:37:08,949 copying build/lib.linux-armv7l-3.7/jcvi/compara/phylogeny.py -> build/bdist.linux-armv7l/wheel/jcvi/compara 2021-03-21T04:37:08,952 creating build/bdist.linux-armv7l/wheel/jcvi/projects 2021-03-21T04:37:08,953 copying build/lib.linux-armv7l-3.7/jcvi/projects/misc.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-03-21T04:37:08,957 copying build/lib.linux-armv7l-3.7/jcvi/projects/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-03-21T04:37:08,959 copying build/lib.linux-armv7l-3.7/jcvi/projects/age.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-03-21T04:37:08,962 copying build/lib.linux-armv7l-3.7/jcvi/projects/pistachio.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-03-21T04:37:08,964 copying build/lib.linux-armv7l-3.7/jcvi/projects/vanilla.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-03-21T04:37:08,968 copying build/lib.linux-armv7l-3.7/jcvi/projects/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-03-21T04:37:08,971 copying build/lib.linux-armv7l-3.7/jcvi/projects/pineapple.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-03-21T04:37:08,974 copying build/lib.linux-armv7l-3.7/jcvi/projects/bites.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-03-21T04:37:08,977 copying build/lib.linux-armv7l-3.7/jcvi/projects/tgbs.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-03-21T04:37:08,980 copying build/lib.linux-armv7l-3.7/jcvi/projects/allmaps.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-03-21T04:37:08,983 copying build/lib.linux-armv7l-3.7/jcvi/projects/str.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-03-21T04:37:08,989 copying build/lib.linux-armv7l-3.7/jcvi/projects/heterosis.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-03-21T04:37:08,992 copying build/lib.linux-armv7l-3.7/jcvi/projects/sugarcane.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-03-21T04:37:08,995 copying build/lib.linux-armv7l-3.7/jcvi/projects/napus.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-03-21T04:37:08,998 copying build/lib.linux-armv7l-3.7/jcvi/projects/synfind.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-03-21T04:37:09,002 copying build/lib.linux-armv7l-3.7/jcvi/projects/alfalfa.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-03-21T04:37:09,004 copying build/lib.linux-armv7l-3.7/jcvi/projects/ies.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-03-21T04:37:09,008 creating build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-03-21T04:37:09,009 copying build/lib.linux-armv7l-3.7/jcvi/graphics/dotplot.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-03-21T04:37:09,012 copying build/lib.linux-armv7l-3.7/jcvi/graphics/base.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-03-21T04:37:09,015 copying build/lib.linux-armv7l-3.7/jcvi/graphics/heatmap.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-03-21T04:37:09,018 copying build/lib.linux-armv7l-3.7/jcvi/graphics/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-03-21T04:37:09,020 copying build/lib.linux-armv7l-3.7/jcvi/graphics/histogram.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-03-21T04:37:09,022 copying build/lib.linux-armv7l-3.7/jcvi/graphics/wheel.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-03-21T04:37:09,025 copying build/lib.linux-armv7l-3.7/jcvi/graphics/grabseeds.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-03-21T04:37:09,028 copying build/lib.linux-armv7l-3.7/jcvi/graphics/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-03-21T04:37:09,031 copying build/lib.linux-armv7l-3.7/jcvi/graphics/landscape.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-03-21T04:37:09,034 copying build/lib.linux-armv7l-3.7/jcvi/graphics/chromosome.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-03-21T04:37:09,038 copying build/lib.linux-armv7l-3.7/jcvi/graphics/glyph.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-03-21T04:37:09,041 copying build/lib.linux-armv7l-3.7/jcvi/graphics/align.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-03-21T04:37:09,044 copying build/lib.linux-armv7l-3.7/jcvi/graphics/synteny.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-03-21T04:37:09,047 copying build/lib.linux-armv7l-3.7/jcvi/graphics/assembly.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-03-21T04:37:09,050 copying build/lib.linux-armv7l-3.7/jcvi/graphics/table.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-03-21T04:37:09,053 copying build/lib.linux-armv7l-3.7/jcvi/graphics/whisker.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-03-21T04:37:09,055 copying build/lib.linux-armv7l-3.7/jcvi/graphics/logo.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-03-21T04:37:09,058 copying build/lib.linux-armv7l-3.7/jcvi/graphics/tree.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-03-21T04:37:09,061 copying build/lib.linux-armv7l-3.7/jcvi/graphics/blastplot.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-03-21T04:37:09,064 copying build/lib.linux-armv7l-3.7/jcvi/graphics/mummerplot.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-03-21T04:37:09,066 copying build/lib.linux-armv7l-3.7/jcvi/graphics/graph.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-03-21T04:37:09,069 copying build/lib.linux-armv7l-3.7/jcvi/graphics/karyotype.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-03-21T04:37:09,072 copying build/lib.linux-armv7l-3.7/jcvi/graphics/coverage.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-03-21T04:37:09,075 running install_egg_info 2021-03-21T04:37:09,086 Copying jcvi.egg-info to build/bdist.linux-armv7l/wheel/jcvi-1.1.10-py3.7.egg-info 2021-03-21T04:37:09,104 running install_scripts 2021-03-21T04:37:09,183 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2021-03-21T04:37:09,189 creating build/bdist.linux-armv7l/wheel/jcvi-1.1.10.dist-info/WHEEL 2021-03-21T04:37:09,193 creating '/tmp/pip-wheel-1zivvh70/jcvi-1.1.10-cp37-cp37m-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2021-03-21T04:37:09,196 adding 'jcvi/__init__.py' 2021-03-21T04:37:09,197 adding 'jcvi/_version.py' 2021-03-21T04:37:09,199 adding 'jcvi/algorithms/__init__.py' 2021-03-21T04:37:09,201 adding 'jcvi/algorithms/__main__.py' 2021-03-21T04:37:09,203 adding 'jcvi/algorithms/ec.py' 2021-03-21T04:37:09,205 adding 'jcvi/algorithms/formula.py' 2021-03-21T04:37:09,207 adding 'jcvi/algorithms/graph.py' 2021-03-21T04:37:09,209 adding 'jcvi/algorithms/lis.py' 2021-03-21T04:37:09,213 adding 'jcvi/algorithms/lpsolve.py' 2021-03-21T04:37:09,215 adding 'jcvi/algorithms/matrix.py' 2021-03-21T04:37:09,217 adding 'jcvi/algorithms/maxsum.py' 2021-03-21T04:37:09,218 adding 'jcvi/algorithms/ml.py' 2021-03-21T04:37:09,220 adding 'jcvi/algorithms/supermap.py' 2021-03-21T04:37:09,223 adding 'jcvi/algorithms/tsp.py' 2021-03-21T04:37:09,225 adding 'jcvi/annotation/__init__.py' 2021-03-21T04:37:09,226 adding 'jcvi/annotation/__main__.py' 2021-03-21T04:37:09,230 adding 'jcvi/annotation/ahrd.py' 2021-03-21T04:37:09,232 adding 'jcvi/annotation/automaton.py' 2021-03-21T04:37:09,234 adding 'jcvi/annotation/depth.py' 2021-03-21T04:37:09,236 adding 'jcvi/annotation/evm.py' 2021-03-21T04:37:09,239 adding 'jcvi/annotation/maker.py' 2021-03-21T04:37:09,242 adding 'jcvi/annotation/pasa.py' 2021-03-21T04:37:09,244 adding 'jcvi/annotation/qc.py' 2021-03-21T04:37:09,250 adding 'jcvi/annotation/reformat.py' 2021-03-21T04:37:09,253 adding 'jcvi/annotation/stats.py' 2021-03-21T04:37:09,255 adding 'jcvi/annotation/train.py' 2021-03-21T04:37:09,257 adding 'jcvi/apps/__init__.py' 2021-03-21T04:37:09,258 adding 'jcvi/apps/__main__.py' 2021-03-21T04:37:09,261 adding 'jcvi/apps/align.py' 2021-03-21T04:37:09,270 adding 'jcvi/apps/base.py' 2021-03-21T04:37:09,273 adding 'jcvi/apps/biomart.py' 2021-03-21T04:37:09,274 adding 'jcvi/apps/blastplus.py' 2021-03-21T04:37:09,276 adding 'jcvi/apps/bowtie.py' 2021-03-21T04:37:09,278 adding 'jcvi/apps/bwa.py' 2021-03-21T04:37:09,280 adding 'jcvi/apps/cap3.py' 2021-03-21T04:37:09,281 adding 'jcvi/apps/cdhit.py' 2021-03-21T04:37:09,283 adding 'jcvi/apps/emboss.py' 2021-03-21T04:37:09,286 adding 'jcvi/apps/fetch.py' 2021-03-21T04:37:09,289 adding 'jcvi/apps/gbsubmit.py' 2021-03-21T04:37:09,291 adding 'jcvi/apps/gmap.py' 2021-03-21T04:37:09,293 adding 'jcvi/apps/grid.py' 2021-03-21T04:37:09,298 adding 'jcvi/apps/ks.py' 2021-03-21T04:37:09,300 adding 'jcvi/apps/lastz.py' 2021-03-21T04:37:09,302 adding 'jcvi/apps/mask.py' 2021-03-21T04:37:09,307 adding 'jcvi/apps/phylo.py' 2021-03-21T04:37:09,308 adding 'jcvi/apps/r.py' 2021-03-21T04:37:09,310 adding 'jcvi/apps/restriction.py' 2021-03-21T04:37:09,311 adding 'jcvi/apps/script.py' 2021-03-21T04:37:09,312 adding 'jcvi/apps/softlink.py' 2021-03-21T04:37:09,317 adding 'jcvi/apps/uclust.py' 2021-03-21T04:37:09,319 adding 'jcvi/apps/uniprot.py' 2021-03-21T04:37:09,321 adding 'jcvi/apps/vecscreen.py' 2021-03-21T04:37:09,323 adding 'jcvi/assembly/__init__.py' 2021-03-21T04:37:09,324 adding 'jcvi/assembly/__main__.py' 2021-03-21T04:37:09,334 adding 'jcvi/assembly/allmaps.py' 2021-03-21T04:37:09,337 adding 'jcvi/assembly/allpaths.py' 2021-03-21T04:37:09,339 adding 'jcvi/assembly/amos.py' 2021-03-21T04:37:09,341 adding 'jcvi/assembly/automaton.py' 2021-03-21T04:37:09,343 adding 'jcvi/assembly/bambus.py' 2021-03-21T04:37:09,345 adding 'jcvi/assembly/base.py' 2021-03-21T04:37:09,350 adding 'jcvi/assembly/ca.py' 2021-03-21T04:37:09,400 adding 'jcvi/assembly/chic.cpython-37m-arm-linux-gnueabihf.so' 2021-03-21T04:37:09,403 adding 'jcvi/assembly/chic.pyx' 2021-03-21T04:37:09,405 adding 'jcvi/assembly/coverage.py' 2021-03-21T04:37:09,407 adding 'jcvi/assembly/gaps.py' 2021-03-21T04:37:09,410 adding 'jcvi/assembly/geneticmap.py' 2021-03-21T04:37:09,415 adding 'jcvi/assembly/goldenpath.py' 2021-03-21T04:37:09,423 adding 'jcvi/assembly/hic.py' 2021-03-21T04:37:09,429 adding 'jcvi/assembly/kmer.py' 2021-03-21T04:37:09,431 adding 'jcvi/assembly/meraculous.py' 2021-03-21T04:37:09,433 adding 'jcvi/assembly/opticalmap.py' 2021-03-21T04:37:09,438 adding 'jcvi/assembly/patch.py' 2021-03-21T04:37:09,441 adding 'jcvi/assembly/pbjelly.py' 2021-03-21T04:37:09,444 adding 'jcvi/assembly/postprocess.py' 2021-03-21T04:37:09,447 adding 'jcvi/assembly/preprocess.py' 2021-03-21T04:37:09,449 adding 'jcvi/assembly/sim.py' 2021-03-21T04:37:09,451 adding 'jcvi/assembly/soap.py' 2021-03-21T04:37:09,454 adding 'jcvi/assembly/sspace.py' 2021-03-21T04:37:09,456 adding 'jcvi/assembly/syntenypath.py' 2021-03-21T04:37:09,458 adding 'jcvi/assembly/trinity.py' 2021-03-21T04:37:09,461 adding 'jcvi/assembly/unitig.py' 2021-03-21T04:37:09,463 adding 'jcvi/compara/__init__.py' 2021-03-21T04:37:09,464 adding 'jcvi/compara/__main__.py' 2021-03-21T04:37:09,466 adding 'jcvi/compara/blastfilter.py' 2021-03-21T04:37:09,470 adding 'jcvi/compara/catalog.py' 2021-03-21T04:37:09,474 adding 'jcvi/compara/fractionation.py' 2021-03-21T04:37:09,477 adding 'jcvi/compara/pad.py' 2021-03-21T04:37:09,478 adding 'jcvi/compara/phylogeny.py' 2021-03-21T04:37:09,480 adding 'jcvi/compara/quota.py' 2021-03-21T04:37:09,482 adding 'jcvi/compara/reconstruct.py' 2021-03-21T04:37:09,484 adding 'jcvi/compara/synfind.py' 2021-03-21T04:37:09,494 adding 'jcvi/compara/synteny.py' 2021-03-21T04:37:09,497 adding 'jcvi/formats/__init__.py' 2021-03-21T04:37:09,498 adding 'jcvi/formats/__main__.py' 2021-03-21T04:37:09,500 adding 'jcvi/formats/ace.py' 2021-03-21T04:37:09,508 adding 'jcvi/formats/agp.py' 2021-03-21T04:37:09,513 adding 'jcvi/formats/base.py' 2021-03-21T04:37:09,523 adding 'jcvi/formats/bed.py' 2021-03-21T04:37:09,529 adding 'jcvi/formats/blast.py' 2021-03-21T04:37:09,531 adding 'jcvi/formats/btab.py' 2021-03-21T04:37:09,637 adding 'jcvi/formats/cblast.cpython-37m-arm-linux-gnueabihf.so' 2021-03-21T04:37:09,641 adding 'jcvi/formats/cblast.pyx' 2021-03-21T04:37:09,643 adding 'jcvi/formats/cdt.py' 2021-03-21T04:37:09,645 adding 'jcvi/formats/chain.py' 2021-03-21T04:37:09,646 adding 'jcvi/formats/contig.py' 2021-03-21T04:37:09,648 adding 'jcvi/formats/coords.py' 2021-03-21T04:37:09,650 adding 'jcvi/formats/excel.py' 2021-03-21T04:37:09,661 adding 'jcvi/formats/fasta.py' 2021-03-21T04:37:09,665 adding 'jcvi/formats/fastq.py' 2021-03-21T04:37:09,667 adding 'jcvi/formats/fpc.py' 2021-03-21T04:37:09,669 adding 'jcvi/formats/genbank.py' 2021-03-21T04:37:09,685 adding 'jcvi/formats/gff.py' 2021-03-21T04:37:09,687 adding 'jcvi/formats/html.py' 2021-03-21T04:37:09,689 adding 'jcvi/formats/maf.py' 2021-03-21T04:37:09,690 adding 'jcvi/formats/obo.py' 2021-03-21T04:37:09,692 adding 'jcvi/formats/paf.py' 2021-03-21T04:37:09,693 adding 'jcvi/formats/pdf.py' 2021-03-21T04:37:09,695 adding 'jcvi/formats/posmap.py' 2021-03-21T04:37:09,697 adding 'jcvi/formats/psl.py' 2021-03-21T04:37:09,699 adding 'jcvi/formats/pyblast.py' 2021-03-21T04:37:09,703 adding 'jcvi/formats/sam.py' 2021-03-21T04:37:09,705 adding 'jcvi/formats/sbt.py' 2021-03-21T04:37:09,707 adding 'jcvi/formats/sizes.py' 2021-03-21T04:37:09,710 adding 'jcvi/formats/vcf.py' 2021-03-21T04:37:09,713 adding 'jcvi/graphics/__init__.py' 2021-03-21T04:37:09,714 adding 'jcvi/graphics/__main__.py' 2021-03-21T04:37:09,717 adding 'jcvi/graphics/align.py' 2021-03-21T04:37:09,720 adding 'jcvi/graphics/assembly.py' 2021-03-21T04:37:09,723 adding 'jcvi/graphics/base.py' 2021-03-21T04:37:09,726 adding 'jcvi/graphics/blastplot.py' 2021-03-21T04:37:09,729 adding 'jcvi/graphics/chromosome.py' 2021-03-21T04:37:09,731 adding 'jcvi/graphics/coverage.py' 2021-03-21T04:37:09,733 adding 'jcvi/graphics/dotplot.py' 2021-03-21T04:37:09,737 adding 'jcvi/graphics/glyph.py' 2021-03-21T04:37:09,740 adding 'jcvi/graphics/grabseeds.py' 2021-03-21T04:37:09,742 adding 'jcvi/graphics/graph.py' 2021-03-21T04:37:09,743 adding 'jcvi/graphics/heatmap.py' 2021-03-21T04:37:09,745 adding 'jcvi/graphics/histogram.py' 2021-03-21T04:37:09,748 adding 'jcvi/graphics/karyotype.py' 2021-03-21T04:37:09,752 adding 'jcvi/graphics/landscape.py' 2021-03-21T04:37:09,754 adding 'jcvi/graphics/logo.py' 2021-03-21T04:37:09,755 adding 'jcvi/graphics/mummerplot.py' 2021-03-21T04:37:09,758 adding 'jcvi/graphics/synteny.py' 2021-03-21T04:37:09,760 adding 'jcvi/graphics/table.py' 2021-03-21T04:37:09,763 adding 'jcvi/graphics/tree.py' 2021-03-21T04:37:09,765 adding 'jcvi/graphics/wheel.py' 2021-03-21T04:37:09,766 adding 'jcvi/graphics/whisker.py' 2021-03-21T04:37:09,768 adding 'jcvi/projects/__init__.py' 2021-03-21T04:37:09,770 adding 'jcvi/projects/__main__.py' 2021-03-21T04:37:09,773 adding 'jcvi/projects/age.py' 2021-03-21T04:37:09,774 adding 'jcvi/projects/alfalfa.py' 2021-03-21T04:37:09,777 adding 'jcvi/projects/allmaps.py' 2021-03-21T04:37:09,779 adding 'jcvi/projects/bites.py' 2021-03-21T04:37:09,781 adding 'jcvi/projects/heterosis.py' 2021-03-21T04:37:09,783 adding 'jcvi/projects/ies.py' 2021-03-21T04:37:09,787 adding 'jcvi/projects/misc.py' 2021-03-21T04:37:09,790 adding 'jcvi/projects/napus.py' 2021-03-21T04:37:09,793 adding 'jcvi/projects/pineapple.py' 2021-03-21T04:37:09,794 adding 'jcvi/projects/pistachio.py' 2021-03-21T04:37:09,803 adding 'jcvi/projects/str.py' 2021-03-21T04:37:09,806 adding 'jcvi/projects/sugarcane.py' 2021-03-21T04:37:09,809 adding 'jcvi/projects/synfind.py' 2021-03-21T04:37:09,812 adding 'jcvi/projects/tgbs.py' 2021-03-21T04:37:09,815 adding 'jcvi/projects/vanilla.py' 2021-03-21T04:37:09,817 adding 'jcvi/utils/__init__.py' 2021-03-21T04:37:09,818 adding 'jcvi/utils/__main__.py' 2021-03-21T04:37:09,821 adding 'jcvi/utils/aws.py' 2021-03-21T04:37:09,824 adding 'jcvi/utils/cbook.py' 2021-03-21T04:37:09,825 adding 'jcvi/utils/console.py' 2021-03-21T04:37:09,827 adding 'jcvi/utils/db.py' 2021-03-21T04:37:09,829 adding 'jcvi/utils/ez_setup.py' 2021-03-21T04:37:09,830 adding 'jcvi/utils/grouper.py' 2021-03-21T04:37:09,832 adding 'jcvi/utils/orderedcollections.py' 2021-03-21T04:37:09,835 adding 'jcvi/utils/range.py' 2021-03-21T04:37:09,836 adding 'jcvi/utils/table.py' 2021-03-21T04:37:09,838 adding 'jcvi/utils/taxonomy.py' 2021-03-21T04:37:09,839 adding 'jcvi/utils/webcolors.py' 2021-03-21T04:37:09,843 adding 'jcvi/utils/data/Airswing.ttf' 2021-03-21T04:37:09,861 adding 'jcvi/utils/data/Collegia.ttf' 2021-03-21T04:37:09,866 adding 'jcvi/utils/data/HookedUp.ttf' 2021-03-21T04:37:09,871 adding 'jcvi/utils/data/Humor-Sans.ttf' 2021-03-21T04:37:09,875 adding 'jcvi/utils/data/TREDs.meta.csv' 2021-03-21T04:37:09,877 adding 'jcvi/utils/data/__init__.py' 2021-03-21T04:37:09,878 adding 'jcvi/utils/data/adapters.fasta' 2021-03-21T04:37:09,880 adding 'jcvi/utils/data/blosum80.mat' 2021-03-21T04:37:09,882 adding 'jcvi/utils/data/chrY.hg38.unique_ccn.gc' 2021-03-21T04:37:09,883 adding 'jcvi/utils/data/colorchecker.txt' 2021-03-21T04:37:09,889 adding 'jcvi/utils/data/hg38.band.txt' 2021-03-21T04:37:09,892 adding 'jcvi/utils/data/hg38.chrom.sizes' 2021-03-21T04:37:09,893 adding 'jcvi/utils/data/instance.json' 2021-03-21T04:37:09,895 adding 'jcvi/variation/__init__.py' 2021-03-21T04:37:09,896 adding 'jcvi/variation/__main__.py' 2021-03-21T04:37:09,901 adding 'jcvi/variation/cnv.py' 2021-03-21T04:37:09,903 adding 'jcvi/variation/deconvolute.py' 2021-03-21T04:37:09,905 adding 'jcvi/variation/delly.py' 2021-03-21T04:37:09,908 adding 'jcvi/variation/impute.py' 2021-03-21T04:37:09,910 adding 'jcvi/variation/phase.py' 2021-03-21T04:37:09,912 adding 'jcvi/variation/snp.py' 2021-03-21T04:37:09,918 adding 'jcvi/variation/str.py' 2021-03-21T04:37:09,920 adding 'jcvi/variation/tassel.py' 2021-03-21T04:37:09,923 adding 'jcvi-1.1.10.dist-info/LICENSE' 2021-03-21T04:37:09,924 adding 'jcvi-1.1.10.dist-info/METADATA' 2021-03-21T04:37:09,925 adding 'jcvi-1.1.10.dist-info/WHEEL' 2021-03-21T04:37:09,926 adding 'jcvi-1.1.10.dist-info/top_level.txt' 2021-03-21T04:37:09,928 adding 'jcvi-1.1.10.dist-info/RECORD' 2021-03-21T04:37:09,947 removing build/bdist.linux-armv7l/wheel 2021-03-21T04:37:10,244 Building wheel for jcvi (setup.py): finished with status 'done' 2021-03-21T04:37:10,259 Created wheel for jcvi: filename=jcvi-1.1.10-cp37-cp37m-linux_armv7l.whl size=1183764 sha256=2d07a44bb10189fa16d80b0e09a5934ff448ce7d203ab4eb98926d4df353b4c9 2021-03-21T04:37:10,259 Stored in directory: /tmp/pip-ephem-wheel-cache-elsjj0dr/wheels/90/f3/45/8d6740e7db4ec4ebf544c9ea3f5f8e461f70df695576d2b15e 2021-03-21T04:37:10,278 Successfully built jcvi 2021-03-21T04:37:10,323 Removed build tracker: '/tmp/pip-req-tracker-18si1zyn'