2021-03-22T11:19:21,039 Created temporary directory: /tmp/pip-ephem-wheel-cache-csjcd8av 2021-03-22T11:19:21,042 Created temporary directory: /tmp/pip-req-tracker-lwq13a_d 2021-03-22T11:19:21,042 Initialized build tracking at /tmp/pip-req-tracker-lwq13a_d 2021-03-22T11:19:21,043 Created build tracker: /tmp/pip-req-tracker-lwq13a_d 2021-03-22T11:19:21,043 Entered build tracker: /tmp/pip-req-tracker-lwq13a_d 2021-03-22T11:19:21,044 Created temporary directory: /tmp/pip-wheel-pw4_291f 2021-03-22T11:19:21,073 1 location(s) to search for versions of rdkit-to-params: 2021-03-22T11:19:21,073 * https://pypi.org/simple/rdkit-to-params/ 2021-03-22T11:19:21,073 Fetching project page and analyzing links: https://pypi.org/simple/rdkit-to-params/ 2021-03-22T11:19:21,074 Getting page https://pypi.org/simple/rdkit-to-params/ 2021-03-22T11:19:21,076 Found index url https://pypi.org/simple 2021-03-22T11:19:21,170 Found link https://files.pythonhosted.org/packages/ef/e8/7a8a812f8d2954b8acdb661bcc9ee5a9d67dae96f96a66d75de2e90282d3/rdkit_to_params-1.tar.gz#sha256=56b7e26a5622a7ac90e54b8a3f4fab79cc8bb63b102aafb3f8c17bcf26df2df3 (from https://pypi.org/simple/rdkit-to-params/) (requires-python:>3.6), version: 1 2021-03-22T11:19:21,170 Found link https://files.pythonhosted.org/packages/54/ce/55e4c99a7500a7db8e785ee282208e50ee8dc541089185144622c9cecdcc/rdkit_to_params-1.0.1.tar.gz#sha256=d11f52ee51e9f79cf3befa26a9669fe7c99be41fff8c654293e5a63136b844f0 (from https://pypi.org/simple/rdkit-to-params/) (requires-python:>3.6), version: 1.0.1 2021-03-22T11:19:21,171 Found link https://files.pythonhosted.org/packages/14/06/f2f72e757eb7deea040c09abef0173a5e6f1023de515afee19d060b9a5f1/rdkit_to_params-1.0.2.tar.gz#sha256=5e169dd2a511f6d4a6747b46010b0d1a165d1ee5a34dd16614b87289d0d344e5 (from https://pypi.org/simple/rdkit-to-params/) (requires-python:>3.6), version: 1.0.2 2021-03-22T11:19:21,172 Found link https://files.pythonhosted.org/packages/cd/23/11617c465b9f3dc6ca9f52356ff4ac3e2f80211800b4205b8123a68a7f73/rdkit_to_params-1.0.4.tar.gz#sha256=74031df79149b4069dc924aa73df9e62dba77d7200473ad02c320c2cfd572aa5 (from https://pypi.org/simple/rdkit-to-params/) (requires-python:>3.6), version: 1.0.4 2021-03-22T11:19:21,172 Found link https://files.pythonhosted.org/packages/53/71/fa36800525e407ac79c355f6e97fefdb808964a7df1e43a088d396654c19/rdkit_to_params-1.0.5.tar.gz#sha256=39461952a6c30a27a23b57a99ca389e4b28d02a53e29d60ad3e9a86395965b3a (from https://pypi.org/simple/rdkit-to-params/) (requires-python:>3.6), version: 1.0.5 2021-03-22T11:19:21,173 Found link https://files.pythonhosted.org/packages/45/0b/867d72723c27a00cc7f330417d6f7268c777b8795bd946fc89786a0f39b0/rdkit_to_params-1.1.0.tar.gz#sha256=c182be58feb386ccb242ccfea7910d18ef6efefbf682c3ecc85088b2c053ba91 (from https://pypi.org/simple/rdkit-to-params/) (requires-python:>3.6), version: 1.1.0 2021-03-22T11:19:21,173 Found link https://files.pythonhosted.org/packages/5b/52/a15ce15be2ad2bd3606c4d9cc0055261cd7eafd098cf9a31dee9f931290a/rdkit_to_params-1.1.1.tar.gz#sha256=4b3a7e70b33bdfc7994cfad00199f794e38f6c9cf88d82ceb78eddf1f2dace9d (from https://pypi.org/simple/rdkit-to-params/) (requires-python:>3.6), version: 1.1.1 2021-03-22T11:19:21,174 Found link https://files.pythonhosted.org/packages/1d/2b/97d12fe38813b96f303f04ed4e2e77f5ee540ad683ff79a21c822c047298/rdkit_to_params-1.1.2.tar.gz#sha256=1967c3716553dd6a34ae8805adc65cbd49646ad28b9386dff094b0dd824283ba (from https://pypi.org/simple/rdkit-to-params/) (requires-python:>3.6), version: 1.1.2 2021-03-22T11:19:21,174 Found link https://files.pythonhosted.org/packages/cf/11/4a451d52b8540a19ae08f28cbec4db146f4d11760133163a94808498f433/rdkit_to_params-1.1.3.tar.gz#sha256=5cdd2f3f7f0751bd2065756ac36147254ca6d87b835828a1f7e5bad1500d7450 (from https://pypi.org/simple/rdkit-to-params/) (requires-python:>3.6), version: 1.1.3 2021-03-22T11:19:21,175 Found link https://files.pythonhosted.org/packages/1f/86/5cdd42d226f7f8dafa43fc9f891a39f8a1689648cfdf0b3653f9fea4c9e9/rdkit_to_params-1.1.4b0.tar.gz#sha256=c1b4c083274f84ff5394d17728cd409fa87418618fdf4c146c47e2947f9c7be7 (from https://pypi.org/simple/rdkit-to-params/) (requires-python:>3.6), version: 1.1.4b0 2021-03-22T11:19:21,175 Found link https://files.pythonhosted.org/packages/cd/9d/b405411dd2b049a635c2629fd62cc23a5b881bf85db16557d8bd02a85f8a/rdkit_to_params-1.1.4.tar.gz#sha256=173a7a029628cccba4ccd041b60dd8144dbc884fd9430f7ffb64a5153ad2531d (from https://pypi.org/simple/rdkit-to-params/) (requires-python:>3.6), version: 1.1.4 2021-03-22T11:19:21,176 Found link https://files.pythonhosted.org/packages/5a/ca/cc51bc1b2d9311c11316ee089825a4183e89dcecc489c1a48c19910c4acd/rdkit_to_params-1.1.5b0.tar.gz#sha256=0cf596da6296d15c9fd3725e0d77e4563c4070913c335e58e8bdf13a5857d5e5 (from https://pypi.org/simple/rdkit-to-params/) (requires-python:>3.6), version: 1.1.5b0 2021-03-22T11:19:21,176 Found link https://files.pythonhosted.org/packages/6e/7d/0ad2b20f89b42b7fb4799b474cff2000529df5b64fac11581103b293c899/rdkit_to_params-1.1.5.tar.gz#sha256=1610c7c8f44d6eb028baeebbc028cf96a3262c5f344262713820b1eb1a7d5d43 (from https://pypi.org/simple/rdkit-to-params/) (requires-python:>3.6), version: 1.1.5 2021-03-22T11:19:21,177 Found link https://files.pythonhosted.org/packages/e9/09/d2b32bb1f932169c2ab253770709574390604a0b44a5edb434823bfd9288/rdkit_to_params-1.1.6.tar.gz#sha256=637b341bc0b31ec3b26740be10630624e47145c9f10d9fa872d087052401635b (from https://pypi.org/simple/rdkit-to-params/) (requires-python:>3.6), version: 1.1.6 2021-03-22T11:19:21,192 Given no hashes to check 1 links for project 'rdkit-to-params': discarding no candidates 2021-03-22T11:19:21,208 Collecting rdkit-to-params==1.1.6 2021-03-22T11:19:21,210 Created temporary directory: /tmp/pip-unpack-zwqbwkm5 2021-03-22T11:19:21,405 Downloading rdkit_to_params-1.1.6.tar.gz (42 kB) 2021-03-22T11:19:21,496 Added rdkit-to-params==1.1.6 from https://files.pythonhosted.org/packages/e9/09/d2b32bb1f932169c2ab253770709574390604a0b44a5edb434823bfd9288/rdkit_to_params-1.1.6.tar.gz#sha256=637b341bc0b31ec3b26740be10630624e47145c9f10d9fa872d087052401635b to build tracker '/tmp/pip-req-tracker-lwq13a_d' 2021-03-22T11:19:21,497 Running setup.py (path:/tmp/pip-wheel-pw4_291f/rdkit-to-params_2338291f522d49748897329195424cff/setup.py) egg_info for package rdkit-to-params 2021-03-22T11:19:21,498 Created temporary directory: /tmp/pip-pip-egg-info-3gechbsu 2021-03-22T11:19:21,498 Running command python setup.py egg_info 2021-03-22T11:19:22,455 running egg_info 2021-03-22T11:19:22,458 creating /tmp/pip-pip-egg-info-3gechbsu/rdkit_to_params.egg-info 2021-03-22T11:19:22,459 writing /tmp/pip-pip-egg-info-3gechbsu/rdkit_to_params.egg-info/PKG-INFO 2021-03-22T11:19:22,463 writing dependency_links to /tmp/pip-pip-egg-info-3gechbsu/rdkit_to_params.egg-info/dependency_links.txt 2021-03-22T11:19:22,465 writing entry points to /tmp/pip-pip-egg-info-3gechbsu/rdkit_to_params.egg-info/entry_points.txt 2021-03-22T11:19:22,467 writing top-level names to /tmp/pip-pip-egg-info-3gechbsu/rdkit_to_params.egg-info/top_level.txt 2021-03-22T11:19:22,469 writing manifest file '/tmp/pip-pip-egg-info-3gechbsu/rdkit_to_params.egg-info/SOURCES.txt' 2021-03-22T11:19:22,608 reading manifest file '/tmp/pip-pip-egg-info-3gechbsu/rdkit_to_params.egg-info/SOURCES.txt' 2021-03-22T11:19:22,612 writing manifest file '/tmp/pip-pip-egg-info-3gechbsu/rdkit_to_params.egg-info/SOURCES.txt' 2021-03-22T11:19:22,613 /tmp/pip-wheel-pw4_291f/rdkit-to-params_2338291f522d49748897329195424cff/setup.py:29: UserWarning: Albeit optional, a lot of this code relies on rdkit which cannot be pip installed.To install try either conda install -c conda-forge rdkit or sudo apt-get/brew install python3-rdkit or visit rdkit documentation. 2021-03-22T11:19:22,614 'conda install -c conda-forge rdkit or ' + 2021-03-22T11:19:22,614 /tmp/pip-wheel-pw4_291f/rdkit-to-params_2338291f522d49748897329195424cff/setup.py:33: UserWarning: The minimisation part of this code uses pyrosetta, which has to be downloaded from the Rosetta software site due to licencing. Without it only the classes Monster and Rectifier will work 2021-03-22T11:19:22,614 warn('The minimisation part of this code uses pyrosetta, which has to be downloaded from ' + 2021-03-22T11:19:22,675 Source in /tmp/pip-wheel-pw4_291f/rdkit-to-params_2338291f522d49748897329195424cff has version 1.1.6, which satisfies requirement rdkit-to-params==1.1.6 from https://files.pythonhosted.org/packages/e9/09/d2b32bb1f932169c2ab253770709574390604a0b44a5edb434823bfd9288/rdkit_to_params-1.1.6.tar.gz#sha256=637b341bc0b31ec3b26740be10630624e47145c9f10d9fa872d087052401635b 2021-03-22T11:19:22,676 Removed rdkit-to-params==1.1.6 from https://files.pythonhosted.org/packages/e9/09/d2b32bb1f932169c2ab253770709574390604a0b44a5edb434823bfd9288/rdkit_to_params-1.1.6.tar.gz#sha256=637b341bc0b31ec3b26740be10630624e47145c9f10d9fa872d087052401635b from build tracker '/tmp/pip-req-tracker-lwq13a_d' 2021-03-22T11:19:22,684 Created temporary directory: /tmp/pip-unpack-x6sk2gce 2021-03-22T11:19:22,685 Building wheels for collected packages: rdkit-to-params 2021-03-22T11:19:22,689 Created temporary directory: /tmp/pip-wheel-i_97yqjd 2021-03-22T11:19:22,690 Building wheel for rdkit-to-params (setup.py): started 2021-03-22T11:19:22,690 Destination directory: /tmp/pip-wheel-i_97yqjd 2021-03-22T11:19:22,690 Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-pw4_291f/rdkit-to-params_2338291f522d49748897329195424cff/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-pw4_291f/rdkit-to-params_2338291f522d49748897329195424cff/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-i_97yqjd 2021-03-22T11:19:23,496 /tmp/pip-wheel-pw4_291f/rdkit-to-params_2338291f522d49748897329195424cff/setup.py:29: UserWarning: Albeit optional, a lot of this code relies on rdkit which cannot be pip installed.To install try either conda install -c conda-forge rdkit or sudo apt-get/brew install python3-rdkit or visit rdkit documentation. 2021-03-22T11:19:23,497 'conda install -c conda-forge rdkit or ' + 2021-03-22T11:19:23,497 /tmp/pip-wheel-pw4_291f/rdkit-to-params_2338291f522d49748897329195424cff/setup.py:33: UserWarning: The minimisation part of this code uses pyrosetta, which has to be downloaded from the Rosetta software site due to licencing. Without it only the classes Monster and Rectifier will work 2021-03-22T11:19:23,497 warn('The minimisation part of this code uses pyrosetta, which has to be downloaded from ' + 2021-03-22T11:19:23,649 running bdist_wheel 2021-03-22T11:19:23,656 running build 2021-03-22T11:19:23,656 running build_py 2021-03-22T11:19:23,790 creating build 2021-03-22T11:19:23,791 creating build/lib 2021-03-22T11:19:23,792 creating build/lib/tests 2021-03-22T11:19:23,793 copying tests/__init__.py -> build/lib/tests 2021-03-22T11:19:23,796 creating build/lib/rdkit_to_params 2021-03-22T11:19:23,797 copying rdkit_to_params/constraint.py -> build/lib/rdkit_to_params 2021-03-22T11:19:23,800 copying rdkit_to_params/_init_mixin.py -> build/lib/rdkit_to_params 2021-03-22T11:19:23,802 copying rdkit_to_params/_io_mixin.py -> build/lib/rdkit_to_params 2021-03-22T11:19:23,805 copying rdkit_to_params/_pyrosetta_mixin.py -> build/lib/rdkit_to_params 2021-03-22T11:19:23,807 copying rdkit_to_params/__init__.py -> build/lib/rdkit_to_params 2021-03-22T11:19:23,810 copying rdkit_to_params/entries.py -> build/lib/rdkit_to_params 2021-03-22T11:19:23,814 creating build/lib/rdkit_to_params/rdkitside 2021-03-22T11:19:23,816 copying rdkit_to_params/rdkitside/_rdkit_prep.py -> build/lib/rdkit_to_params/rdkitside 2021-03-22T11:19:23,819 copying rdkit_to_params/rdkitside/_rdkit_inits.py -> build/lib/rdkit_to_params/rdkitside 2021-03-22T11:19:23,822 copying rdkit_to_params/rdkitside/_rdkit_rename.py -> build/lib/rdkit_to_params/rdkitside 2021-03-22T11:19:23,825 copying rdkit_to_params/rdkitside/_rdkit_convert.py -> build/lib/rdkit_to_params/rdkitside 2021-03-22T11:19:23,829 copying rdkit_to_params/rdkitside/__init__.py -> build/lib/rdkit_to_params/rdkitside 2021-03-22T11:19:23,832 creating build/lib/rdkit_to_params/cli 2021-03-22T11:19:23,833 copying rdkit_to_params/cli/__init__.py -> build/lib/rdkit_to_params/cli 2021-03-22T11:19:23,842 installing to build/bdist.linux-armv7l/wheel 2021-03-22T11:19:23,842 running install 2021-03-22T11:19:23,844 running install_lib 2021-03-22T11:19:23,848 creating build/bdist.linux-armv7l 2021-03-22T11:19:23,848 creating build/bdist.linux-armv7l/wheel 2021-03-22T11:19:23,850 creating build/bdist.linux-armv7l/wheel/tests 2021-03-22T11:19:23,851 copying build/lib/tests/__init__.py -> build/bdist.linux-armv7l/wheel/tests 2021-03-22T11:19:23,855 creating build/bdist.linux-armv7l/wheel/rdkit_to_params 2021-03-22T11:19:23,856 copying build/lib/rdkit_to_params/constraint.py -> build/bdist.linux-armv7l/wheel/rdkit_to_params 2021-03-22T11:19:23,860 copying build/lib/rdkit_to_params/_init_mixin.py -> build/bdist.linux-armv7l/wheel/rdkit_to_params 2021-03-22T11:19:23,863 creating build/bdist.linux-armv7l/wheel/rdkit_to_params/rdkitside 2021-03-22T11:19:23,864 copying build/lib/rdkit_to_params/rdkitside/_rdkit_prep.py -> build/bdist.linux-armv7l/wheel/rdkit_to_params/rdkitside 2021-03-22T11:19:23,868 copying build/lib/rdkit_to_params/rdkitside/_rdkit_inits.py -> build/bdist.linux-armv7l/wheel/rdkit_to_params/rdkitside 2021-03-22T11:19:23,871 copying build/lib/rdkit_to_params/rdkitside/_rdkit_rename.py -> build/bdist.linux-armv7l/wheel/rdkit_to_params/rdkitside 2021-03-22T11:19:23,874 copying build/lib/rdkit_to_params/rdkitside/_rdkit_convert.py -> build/bdist.linux-armv7l/wheel/rdkit_to_params/rdkitside 2021-03-22T11:19:23,877 copying build/lib/rdkit_to_params/rdkitside/__init__.py -> build/bdist.linux-armv7l/wheel/rdkit_to_params/rdkitside 2021-03-22T11:19:23,880 copying build/lib/rdkit_to_params/_io_mixin.py -> build/bdist.linux-armv7l/wheel/rdkit_to_params 2021-03-22T11:19:23,882 copying build/lib/rdkit_to_params/_pyrosetta_mixin.py -> build/bdist.linux-armv7l/wheel/rdkit_to_params 2021-03-22T11:19:23,885 creating build/bdist.linux-armv7l/wheel/rdkit_to_params/cli 2021-03-22T11:19:23,886 copying build/lib/rdkit_to_params/cli/__init__.py -> build/bdist.linux-armv7l/wheel/rdkit_to_params/cli 2021-03-22T11:19:23,889 copying build/lib/rdkit_to_params/__init__.py -> build/bdist.linux-armv7l/wheel/rdkit_to_params 2021-03-22T11:19:23,892 copying build/lib/rdkit_to_params/entries.py -> build/bdist.linux-armv7l/wheel/rdkit_to_params 2021-03-22T11:19:23,895 running install_egg_info 2021-03-22T11:19:23,918 running egg_info 2021-03-22T11:19:23,919 writing rdkit_to_params.egg-info/PKG-INFO 2021-03-22T11:19:23,923 writing dependency_links to rdkit_to_params.egg-info/dependency_links.txt 2021-03-22T11:19:23,925 writing entry points to rdkit_to_params.egg-info/entry_points.txt 2021-03-22T11:19:23,926 writing top-level names to rdkit_to_params.egg-info/top_level.txt 2021-03-22T11:19:23,932 reading manifest file 'rdkit_to_params.egg-info/SOURCES.txt' 2021-03-22T11:19:23,937 writing manifest file 'rdkit_to_params.egg-info/SOURCES.txt' 2021-03-22T11:19:23,939 Copying rdkit_to_params.egg-info to build/bdist.linux-armv7l/wheel/rdkit_to_params-1.1.6-py3.7.egg-info 2021-03-22T11:19:23,953 running install_scripts 2021-03-22T11:19:24,041 creating build/bdist.linux-armv7l/wheel/rdkit_to_params-1.1.6.dist-info/WHEEL 2021-03-22T11:19:24,044 creating '/tmp/pip-wheel-i_97yqjd/rdkit_to_params-1.1.6-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2021-03-22T11:19:24,049 adding 'rdkit_to_params/__init__.py' 2021-03-22T11:19:24,050 adding 'rdkit_to_params/_init_mixin.py' 2021-03-22T11:19:24,052 adding 'rdkit_to_params/_io_mixin.py' 2021-03-22T11:19:24,053 adding 'rdkit_to_params/_pyrosetta_mixin.py' 2021-03-22T11:19:24,056 adding 'rdkit_to_params/constraint.py' 2021-03-22T11:19:24,059 adding 'rdkit_to_params/entries.py' 2021-03-22T11:19:24,061 adding 'rdkit_to_params/cli/__init__.py' 2021-03-22T11:19:24,063 adding 'rdkit_to_params/rdkitside/__init__.py' 2021-03-22T11:19:24,066 adding 'rdkit_to_params/rdkitside/_rdkit_convert.py' 2021-03-22T11:19:24,068 adding 'rdkit_to_params/rdkitside/_rdkit_inits.py' 2021-03-22T11:19:24,071 adding 'rdkit_to_params/rdkitside/_rdkit_prep.py' 2021-03-22T11:19:24,073 adding 'rdkit_to_params/rdkitside/_rdkit_rename.py' 2021-03-22T11:19:24,077 adding 'tests/__init__.py' 2021-03-22T11:19:24,079 adding 'rdkit_to_params-1.1.6.dist-info/METADATA' 2021-03-22T11:19:24,080 adding 'rdkit_to_params-1.1.6.dist-info/WHEEL' 2021-03-22T11:19:24,081 adding 'rdkit_to_params-1.1.6.dist-info/entry_points.txt' 2021-03-22T11:19:24,082 adding 'rdkit_to_params-1.1.6.dist-info/top_level.txt' 2021-03-22T11:19:24,082 adding 'rdkit_to_params-1.1.6.dist-info/RECORD' 2021-03-22T11:19:24,084 removing build/bdist.linux-armv7l/wheel 2021-03-22T11:19:24,159 Building wheel for rdkit-to-params (setup.py): finished with status 'done' 2021-03-22T11:19:24,162 Created wheel for rdkit-to-params: filename=rdkit_to_params-1.1.6-py3-none-any.whl size=42828 sha256=7ee08391ee90a5415dbfb8d9ccc2615536cf8ba84b6d7b2c807e7327c76f12e6 2021-03-22T11:19:24,163 Stored in directory: /tmp/pip-ephem-wheel-cache-csjcd8av/wheels/bf/05/ab/12ed65db07e1b4cbc359eaf9aa1eec662833a5b9d74737350b 2021-03-22T11:19:24,172 Successfully built rdkit-to-params 2021-03-22T11:19:24,176 Removed build tracker: '/tmp/pip-req-tracker-lwq13a_d'