2021-03-24T23:17:47,986 DEPRECATION: Python 3.5 reached the end of its life on September 13th, 2020. Please upgrade your Python as Python 3.5 is no longer maintained. pip 21.0 will drop support for Python 3.5 in January 2021. pip 21.0 will remove support for this functionality.
2021-03-24T23:17:48,648 Created temporary directory: /tmp/pip-ephem-wheel-cache-9xkb9uzs
2021-03-24T23:17:48,653 Created temporary directory: /tmp/pip-req-tracker-y7h9yt95
2021-03-24T23:17:48,654 Initialized build tracking at /tmp/pip-req-tracker-y7h9yt95
2021-03-24T23:17:48,655 Created build tracker: /tmp/pip-req-tracker-y7h9yt95
2021-03-24T23:17:48,655 Entered build tracker: /tmp/pip-req-tracker-y7h9yt95
2021-03-24T23:17:48,656 Created temporary directory: /tmp/pip-wheel-o3jsmmip
2021-03-24T23:17:48,720 1 location(s) to search for versions of ebi-eva-common-pyutils:
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2021-03-24T23:17:48,721 Fetching project page and analyzing links: https://pypi.org/simple/ebi-eva-common-pyutils/
2021-03-24T23:17:48,723 Getting page https://pypi.org/simple/ebi-eva-common-pyutils/
2021-03-24T23:17:48,727 Found index url https://pypi.org/simple
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2021-03-24T23:17:49,085 Given no hashes to check 1 links for project 'ebi-eva-common-pyutils': discarding no candidates
2021-03-24T23:17:49,120 Collecting ebi-eva-common-pyutils==0.3.9.dev11
2021-03-24T23:17:49,123   Created temporary directory: /tmp/pip-unpack-rs7djh4k
2021-03-24T23:17:49,345   Downloading ebi_eva_common_pyutils-0.3.9.dev11.tar.gz (17 kB)
2021-03-24T23:17:49,560   Added ebi-eva-common-pyutils==0.3.9.dev11 from https://files.pythonhosted.org/packages/c9/2d/9c429b6bf5898961aea84de0172bb8133893ceecf428251cb464ed32ee76/ebi_eva_common_pyutils-0.3.9.dev11.tar.gz#sha256=a1a142376619dbb2f90b6833b153a2124dcbdef59857717516b801fce970a970 to build tracker '/tmp/pip-req-tracker-y7h9yt95'
2021-03-24T23:17:49,562     Running setup.py (path:/tmp/pip-wheel-o3jsmmip/ebi-eva-common-pyutils_4bfa7af0dcd54bf69bfbb65d5fb070f0/setup.py) egg_info for package ebi-eva-common-pyutils
2021-03-24T23:17:49,564     Created temporary directory: /tmp/pip-pip-egg-info-ng1qpl1j
2021-03-24T23:17:49,565     Running command python setup.py egg_info
2021-03-24T23:17:51,781     running egg_info
2021-03-24T23:17:51,788     creating /tmp/pip-pip-egg-info-ng1qpl1j/ebi_eva_common_pyutils.egg-info
2021-03-24T23:17:51,790     writing /tmp/pip-pip-egg-info-ng1qpl1j/ebi_eva_common_pyutils.egg-info/PKG-INFO
2021-03-24T23:17:51,797     writing requirements to /tmp/pip-pip-egg-info-ng1qpl1j/ebi_eva_common_pyutils.egg-info/requires.txt
2021-03-24T23:17:51,800     writing top-level names to /tmp/pip-pip-egg-info-ng1qpl1j/ebi_eva_common_pyutils.egg-info/top_level.txt
2021-03-24T23:17:51,802     writing dependency_links to /tmp/pip-pip-egg-info-ng1qpl1j/ebi_eva_common_pyutils.egg-info/dependency_links.txt
2021-03-24T23:17:51,806     writing manifest file '/tmp/pip-pip-egg-info-ng1qpl1j/ebi_eva_common_pyutils.egg-info/SOURCES.txt'
2021-03-24T23:17:52,170     reading manifest file '/tmp/pip-pip-egg-info-ng1qpl1j/ebi_eva_common_pyutils.egg-info/SOURCES.txt'
2021-03-24T23:17:52,180     writing manifest file '/tmp/pip-pip-egg-info-ng1qpl1j/ebi_eva_common_pyutils.egg-info/SOURCES.txt'
2021-03-24T23:17:52,182     /usr/local/lib/python3.5/dist-packages/setuptools/dist.py:452: UserWarning: Normalizing '0.3.9dev11' to '0.3.9.dev11'
2021-03-24T23:17:52,183       warnings.warn(tmpl.format(**locals()))
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2021-03-24T23:17:52,324 Created temporary directory: /tmp/pip-unpack-k99vite2
2021-03-24T23:17:52,325 Building wheels for collected packages: ebi-eva-common-pyutils
2021-03-24T23:17:52,334   Created temporary directory: /tmp/pip-wheel-o4fbodrm
2021-03-24T23:17:52,335   Building wheel for ebi-eva-common-pyutils (setup.py): started
2021-03-24T23:17:52,336   Destination directory: /tmp/pip-wheel-o4fbodrm
2021-03-24T23:17:52,336   Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-o3jsmmip/ebi-eva-common-pyutils_4bfa7af0dcd54bf69bfbb65d5fb070f0/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-o3jsmmip/ebi-eva-common-pyutils_4bfa7af0dcd54bf69bfbb65d5fb070f0/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-o4fbodrm
2021-03-24T23:17:54,469   /usr/local/lib/python3.5/dist-packages/setuptools/dist.py:452: UserWarning: Normalizing '0.3.9dev11' to '0.3.9.dev11'
2021-03-24T23:17:54,470     warnings.warn(tmpl.format(**locals()))
2021-03-24T23:17:54,591   running bdist_wheel
2021-03-24T23:17:54,607   running build
2021-03-24T23:17:54,608   running build_py
2021-03-24T23:17:54,952   creating build
2021-03-24T23:17:54,953   creating build/lib
2021-03-24T23:17:54,954   creating build/lib/ebi_eva_common_pyutils
2021-03-24T23:17:54,958   copying ebi_eva_common_pyutils/config.py -> build/lib/ebi_eva_common_pyutils
2021-03-24T23:17:54,963   copying ebi_eva_common_pyutils/pg_utils.py -> build/lib/ebi_eva_common_pyutils
2021-03-24T23:17:54,968   copying ebi_eva_common_pyutils/__init__.py -> build/lib/ebi_eva_common_pyutils
2021-03-24T23:17:54,971   copying ebi_eva_common_pyutils/mongo_utils.py -> build/lib/ebi_eva_common_pyutils
2021-03-24T23:17:54,976   copying ebi_eva_common_pyutils/logger.py -> build/lib/ebi_eva_common_pyutils
2021-03-24T23:17:54,982   copying ebi_eva_common_pyutils/metadata_utils.py -> build/lib/ebi_eva_common_pyutils
2021-03-24T23:17:54,989   copying ebi_eva_common_pyutils/file_utils.py -> build/lib/ebi_eva_common_pyutils
2021-03-24T23:17:54,995   copying ebi_eva_common_pyutils/config_utils.py -> build/lib/ebi_eva_common_pyutils
2021-03-24T23:17:55,001   copying ebi_eva_common_pyutils/common_utils.py -> build/lib/ebi_eva_common_pyutils
2021-03-24T23:17:55,007   copying ebi_eva_common_pyutils/network_utils.py -> build/lib/ebi_eva_common_pyutils
2021-03-24T23:17:55,013   copying ebi_eva_common_pyutils/command_utils.py -> build/lib/ebi_eva_common_pyutils
2021-03-24T23:17:55,020   creating build/lib/ebi_eva_common_pyutils/mongodb
2021-03-24T23:17:55,022   copying ebi_eva_common_pyutils/mongodb/__init__.py -> build/lib/ebi_eva_common_pyutils/mongodb
2021-03-24T23:17:55,026   copying ebi_eva_common_pyutils/mongodb/mongo_database.py -> build/lib/ebi_eva_common_pyutils/mongodb
2021-03-24T23:17:55,033   creating build/lib/ebi_eva_common_pyutils/taxonomy
2021-03-24T23:17:55,035   copying ebi_eva_common_pyutils/taxonomy/__init__.py -> build/lib/ebi_eva_common_pyutils/taxonomy
2021-03-24T23:17:55,040   copying ebi_eva_common_pyutils/taxonomy/taxonomy.py -> build/lib/ebi_eva_common_pyutils/taxonomy
2021-03-24T23:17:55,048   creating build/lib/ebi_eva_common_pyutils/variation
2021-03-24T23:17:55,050   copying ebi_eva_common_pyutils/variation/__init__.py -> build/lib/ebi_eva_common_pyutils/variation
2021-03-24T23:17:55,056   copying ebi_eva_common_pyutils/variation/assembly_utils.py -> build/lib/ebi_eva_common_pyutils/variation
2021-03-24T23:17:55,062   copying ebi_eva_common_pyutils/variation/contig_utils.py -> build/lib/ebi_eva_common_pyutils/variation
2021-03-24T23:17:55,068   creating build/lib/ebi_eva_common_pyutils/assembly
2021-03-24T23:17:55,070   copying ebi_eva_common_pyutils/assembly/__init__.py -> build/lib/ebi_eva_common_pyutils/assembly
2021-03-24T23:17:55,075   copying ebi_eva_common_pyutils/assembly/assembly.py -> build/lib/ebi_eva_common_pyutils/assembly
2021-03-24T23:17:55,083   creating build/lib/ebi_eva_common_pyutils/nextflow
2021-03-24T23:17:55,085   copying ebi_eva_common_pyutils/nextflow/__init__.py -> build/lib/ebi_eva_common_pyutils/nextflow
2021-03-24T23:17:55,091   copying ebi_eva_common_pyutils/nextflow/linear_pipeline.py -> build/lib/ebi_eva_common_pyutils/nextflow
2021-03-24T23:17:55,112   installing to build/bdist.linux-armv7l/wheel
2021-03-24T23:17:55,113   running install
2021-03-24T23:17:55,115   running install_lib
2021-03-24T23:17:55,123   creating build/bdist.linux-armv7l
2021-03-24T23:17:55,124   creating build/bdist.linux-armv7l/wheel
2021-03-24T23:17:55,128   creating build/bdist.linux-armv7l/wheel/ebi_eva_common_pyutils
2021-03-24T23:17:55,130   copying build/lib/ebi_eva_common_pyutils/config.py -> build/bdist.linux-armv7l/wheel/ebi_eva_common_pyutils
2021-03-24T23:17:55,135   copying build/lib/ebi_eva_common_pyutils/pg_utils.py -> build/bdist.linux-armv7l/wheel/ebi_eva_common_pyutils
2021-03-24T23:17:55,142   creating build/bdist.linux-armv7l/wheel/ebi_eva_common_pyutils/mongodb
2021-03-24T23:17:55,144   copying build/lib/ebi_eva_common_pyutils/mongodb/__init__.py -> build/bdist.linux-armv7l/wheel/ebi_eva_common_pyutils/mongodb
2021-03-24T23:17:55,150   copying build/lib/ebi_eva_common_pyutils/mongodb/mongo_database.py -> build/bdist.linux-armv7l/wheel/ebi_eva_common_pyutils/mongodb
2021-03-24T23:17:55,157   copying build/lib/ebi_eva_common_pyutils/__init__.py -> build/bdist.linux-armv7l/wheel/ebi_eva_common_pyutils
2021-03-24T23:17:55,162   copying build/lib/ebi_eva_common_pyutils/mongo_utils.py -> build/bdist.linux-armv7l/wheel/ebi_eva_common_pyutils
2021-03-24T23:17:55,167   copying build/lib/ebi_eva_common_pyutils/logger.py -> build/bdist.linux-armv7l/wheel/ebi_eva_common_pyutils
2021-03-24T23:17:55,173   creating build/bdist.linux-armv7l/wheel/ebi_eva_common_pyutils/taxonomy
2021-03-24T23:17:55,175   copying build/lib/ebi_eva_common_pyutils/taxonomy/__init__.py -> build/bdist.linux-armv7l/wheel/ebi_eva_common_pyutils/taxonomy
2021-03-24T23:17:55,179   copying build/lib/ebi_eva_common_pyutils/taxonomy/taxonomy.py -> build/bdist.linux-armv7l/wheel/ebi_eva_common_pyutils/taxonomy
2021-03-24T23:17:55,184   copying build/lib/ebi_eva_common_pyutils/metadata_utils.py -> build/bdist.linux-armv7l/wheel/ebi_eva_common_pyutils
2021-03-24T23:17:55,190   copying build/lib/ebi_eva_common_pyutils/file_utils.py -> build/bdist.linux-armv7l/wheel/ebi_eva_common_pyutils
2021-03-24T23:17:55,197   creating build/bdist.linux-armv7l/wheel/ebi_eva_common_pyutils/variation
2021-03-24T23:17:55,200   copying build/lib/ebi_eva_common_pyutils/variation/__init__.py -> build/bdist.linux-armv7l/wheel/ebi_eva_common_pyutils/variation
2021-03-24T23:17:55,204   copying build/lib/ebi_eva_common_pyutils/variation/assembly_utils.py -> build/bdist.linux-armv7l/wheel/ebi_eva_common_pyutils/variation
2021-03-24T23:17:55,209   copying build/lib/ebi_eva_common_pyutils/variation/contig_utils.py -> build/bdist.linux-armv7l/wheel/ebi_eva_common_pyutils/variation
2021-03-24T23:17:55,214   copying build/lib/ebi_eva_common_pyutils/config_utils.py -> build/bdist.linux-armv7l/wheel/ebi_eva_common_pyutils
2021-03-24T23:17:55,219   copying build/lib/ebi_eva_common_pyutils/common_utils.py -> build/bdist.linux-armv7l/wheel/ebi_eva_common_pyutils
2021-03-24T23:17:55,223   copying build/lib/ebi_eva_common_pyutils/network_utils.py -> build/bdist.linux-armv7l/wheel/ebi_eva_common_pyutils
2021-03-24T23:17:55,230   creating build/bdist.linux-armv7l/wheel/ebi_eva_common_pyutils/assembly
2021-03-24T23:17:55,233   copying build/lib/ebi_eva_common_pyutils/assembly/__init__.py -> build/bdist.linux-armv7l/wheel/ebi_eva_common_pyutils/assembly
2021-03-24T23:17:55,239   copying build/lib/ebi_eva_common_pyutils/assembly/assembly.py -> build/bdist.linux-armv7l/wheel/ebi_eva_common_pyutils/assembly
2021-03-24T23:17:55,246   copying build/lib/ebi_eva_common_pyutils/command_utils.py -> build/bdist.linux-armv7l/wheel/ebi_eva_common_pyutils
2021-03-24T23:17:55,251   creating build/bdist.linux-armv7l/wheel/ebi_eva_common_pyutils/nextflow
2021-03-24T23:17:55,253   copying build/lib/ebi_eva_common_pyutils/nextflow/__init__.py -> build/bdist.linux-armv7l/wheel/ebi_eva_common_pyutils/nextflow
2021-03-24T23:17:55,258   copying build/lib/ebi_eva_common_pyutils/nextflow/linear_pipeline.py -> build/bdist.linux-armv7l/wheel/ebi_eva_common_pyutils/nextflow
2021-03-24T23:17:55,262   running install_egg_info
2021-03-24T23:17:55,317   running egg_info
2021-03-24T23:17:55,318   writing requirements to ebi_eva_common_pyutils.egg-info/requires.txt
2021-03-24T23:17:55,322   writing dependency_links to ebi_eva_common_pyutils.egg-info/dependency_links.txt
2021-03-24T23:17:55,325   writing top-level names to ebi_eva_common_pyutils.egg-info/top_level.txt
2021-03-24T23:17:55,327   writing ebi_eva_common_pyutils.egg-info/PKG-INFO
2021-03-24T23:17:55,344   reading manifest file 'ebi_eva_common_pyutils.egg-info/SOURCES.txt'
2021-03-24T23:17:55,356   writing manifest file 'ebi_eva_common_pyutils.egg-info/SOURCES.txt'
2021-03-24T23:17:55,360   Copying ebi_eva_common_pyutils.egg-info to build/bdist.linux-armv7l/wheel/ebi_eva_common_pyutils-0.3.9.dev11-py3.5.egg-info
2021-03-24T23:17:55,387   running install_scripts
2021-03-24T23:17:55,584   creating build/bdist.linux-armv7l/wheel/ebi_eva_common_pyutils-0.3.9.dev11.dist-info/WHEEL
2021-03-24T23:17:55,896   Building wheel for ebi-eva-common-pyutils (setup.py): finished with status 'done'
2021-03-24T23:17:55,900   Created wheel for ebi-eva-common-pyutils: filename=ebi_eva_common_pyutils-0.3.9.dev11-py3-none-any.whl size=28392 sha256=0c0fc8958e16cb1fdef20ff61249e352758f1bb58d4fcb25d2a0136d5f9e198b
2021-03-24T23:17:55,901   Stored in directory: /tmp/pip-ephem-wheel-cache-9xkb9uzs/wheels/13/38/3d/e582e7db10dad79fb02b425f6741e2cf1b222511981fde8491
2021-03-24T23:17:55,920 Successfully built ebi-eva-common-pyutils
2021-03-24T23:17:55,930 Removed build tracker: '/tmp/pip-req-tracker-y7h9yt95'