2021-04-06T05:15:15,599 Created temporary directory: /tmp/pip-ephem-wheel-cache-bwj_l2cm
2021-04-06T05:15:15,602 Created temporary directory: /tmp/pip-req-tracker-e1du6lr9
2021-04-06T05:15:15,602 Initialized build tracking at /tmp/pip-req-tracker-e1du6lr9
2021-04-06T05:15:15,602 Created build tracker: /tmp/pip-req-tracker-e1du6lr9
2021-04-06T05:15:15,603 Entered build tracker: /tmp/pip-req-tracker-e1du6lr9
2021-04-06T05:15:15,603 Created temporary directory: /tmp/pip-wheel-1mebnb8t
2021-04-06T05:15:15,636 1 location(s) to search for versions of cytohmm:
2021-04-06T05:15:15,636 * https://pypi.org/simple/cytohmm/
2021-04-06T05:15:15,637 Fetching project page and analyzing links: https://pypi.org/simple/cytohmm/
2021-04-06T05:15:15,637 Getting page https://pypi.org/simple/cytohmm/
2021-04-06T05:15:15,639 Found index url https://pypi.org/simple
2021-04-06T05:15:15,733   Found link https://files.pythonhosted.org/packages/39/b7/66f96e238de940ee4fe5d86048689df8c105f56b57d5cb052b5f4a255328/cytohmm-0.0.1.tar.gz#sha256=f51f92e9d34fa64bf27055977cb93167e23ac6113a3816977a724d5bfa2c750e (from https://pypi.org/simple/cytohmm/), version: 0.0.1
2021-04-06T05:15:15,733   Found link https://files.pythonhosted.org/packages/0f/1d/f92e919a35149774961020a922374bf7e0c245104aa9816c1896ec621dfe/cytohmm-0.0.2.tar.gz#sha256=8e02e8e8e35cdf8578837d12cfee9399218b7e449f407c1e66532420f928dd32 (from https://pypi.org/simple/cytohmm/), version: 0.0.2
2021-04-06T05:15:15,734   Found link https://files.pythonhosted.org/packages/54/56/2a327392bbe1450b4bfb07a2ba62ea7f49ce383a76aae62fa9c0e546e128/cytohmm-0.0.3.tar.gz#sha256=89c6fc98532f317233c0a43390717736211d728d1a6c2b6320b8f38d14047449 (from https://pypi.org/simple/cytohmm/), version: 0.0.3
2021-04-06T05:15:15,734   Found link https://files.pythonhosted.org/packages/7e/7e/77b89a6a5bde0a85c69c82e16bc4bb1629c09a1b831048c99d0d71522e43/cytohmm-0.1.0.tar.gz#sha256=0c00df6c5ad19913469470dec4848206230cc8ab29f3ef67b70e122711bb2253 (from https://pypi.org/simple/cytohmm/) (requires-python:<4,>=3.6), version: 0.1.0
2021-04-06T05:15:15,748 Given no hashes to check 1 links for project 'cytohmm': discarding no candidates
2021-04-06T05:15:15,763 Collecting cytohmm==0.1.0
2021-04-06T05:15:15,764   Created temporary directory: /tmp/pip-unpack-b0pobnnt
2021-04-06T05:15:15,975   Downloading cytohmm-0.1.0.tar.gz (103 kB)
2021-04-06T05:15:16,119   Added cytohmm==0.1.0 from https://files.pythonhosted.org/packages/7e/7e/77b89a6a5bde0a85c69c82e16bc4bb1629c09a1b831048c99d0d71522e43/cytohmm-0.1.0.tar.gz#sha256=0c00df6c5ad19913469470dec4848206230cc8ab29f3ef67b70e122711bb2253 to build tracker '/tmp/pip-req-tracker-e1du6lr9'
2021-04-06T05:15:16,120     Running setup.py (path:/tmp/pip-wheel-1mebnb8t/cytohmm_8e78cfb5bc894fd08a89f879f85ca1a5/setup.py) egg_info for package cytohmm
2021-04-06T05:15:16,121     Created temporary directory: /tmp/pip-pip-egg-info-52tpjgpr
2021-04-06T05:15:16,122     Running command python setup.py egg_info
2021-04-06T05:15:18,203     running egg_info
2021-04-06T05:15:18,205     creating /tmp/pip-pip-egg-info-52tpjgpr/cytohmm.egg-info
2021-04-06T05:15:18,206     writing /tmp/pip-pip-egg-info-52tpjgpr/cytohmm.egg-info/PKG-INFO
2021-04-06T05:15:18,209     writing dependency_links to /tmp/pip-pip-egg-info-52tpjgpr/cytohmm.egg-info/dependency_links.txt
2021-04-06T05:15:18,212     writing requirements to /tmp/pip-pip-egg-info-52tpjgpr/cytohmm.egg-info/requires.txt
2021-04-06T05:15:18,213     writing top-level names to /tmp/pip-pip-egg-info-52tpjgpr/cytohmm.egg-info/top_level.txt
2021-04-06T05:15:18,215     writing manifest file '/tmp/pip-pip-egg-info-52tpjgpr/cytohmm.egg-info/SOURCES.txt'
2021-04-06T05:15:18,354     reading manifest file '/tmp/pip-pip-egg-info-52tpjgpr/cytohmm.egg-info/SOURCES.txt'
2021-04-06T05:15:18,356     reading manifest template 'MANIFEST.in'
2021-04-06T05:15:18,368     writing manifest file '/tmp/pip-pip-egg-info-52tpjgpr/cytohmm.egg-info/SOURCES.txt'
2021-04-06T05:15:18,489   Source in /tmp/pip-wheel-1mebnb8t/cytohmm_8e78cfb5bc894fd08a89f879f85ca1a5 has version 0.1.0, which satisfies requirement cytohmm==0.1.0 from https://files.pythonhosted.org/packages/7e/7e/77b89a6a5bde0a85c69c82e16bc4bb1629c09a1b831048c99d0d71522e43/cytohmm-0.1.0.tar.gz#sha256=0c00df6c5ad19913469470dec4848206230cc8ab29f3ef67b70e122711bb2253
2021-04-06T05:15:18,490   Removed cytohmm==0.1.0 from https://files.pythonhosted.org/packages/7e/7e/77b89a6a5bde0a85c69c82e16bc4bb1629c09a1b831048c99d0d71522e43/cytohmm-0.1.0.tar.gz#sha256=0c00df6c5ad19913469470dec4848206230cc8ab29f3ef67b70e122711bb2253 from build tracker '/tmp/pip-req-tracker-e1du6lr9'
2021-04-06T05:15:18,497 Created temporary directory: /tmp/pip-unpack-v73d2rp5
2021-04-06T05:15:18,497 Building wheels for collected packages: cytohmm
2021-04-06T05:15:18,502   Created temporary directory: /tmp/pip-wheel-ttdxipwp
2021-04-06T05:15:18,503   Building wheel for cytohmm (setup.py): started
2021-04-06T05:15:18,503   Destination directory: /tmp/pip-wheel-ttdxipwp
2021-04-06T05:15:18,503   Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-1mebnb8t/cytohmm_8e78cfb5bc894fd08a89f879f85ca1a5/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-1mebnb8t/cytohmm_8e78cfb5bc894fd08a89f879f85ca1a5/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-ttdxipwp
2021-04-06T05:15:20,455   running bdist_wheel
2021-04-06T05:15:20,460   running build
2021-04-06T05:15:20,460   running build_py
2021-04-06T05:15:20,584   creating build
2021-04-06T05:15:20,585   creating build/lib.linux-armv7l-3.7
2021-04-06T05:15:20,585   creating build/lib.linux-armv7l-3.7/cytohmm
2021-04-06T05:15:20,587   copying src/cytohmm/sequence_segmenter.py -> build/lib.linux-armv7l-3.7/cytohmm
2021-04-06T05:15:20,589   copying src/cytohmm/__init__.py -> build/lib.linux-armv7l-3.7/cytohmm
2021-04-06T05:15:20,591   running build_ext
2021-04-06T05:15:20,597   building 'cytohmm.markov_chain' extension
2021-04-06T05:15:20,597   creating build/temp.linux-armv7l-3.7
2021-04-06T05:15:20,598   creating build/temp.linux-armv7l-3.7/src
2021-04-06T05:15:20,599   creating build/temp.linux-armv7l-3.7/src/cytohmm
2021-04-06T05:15:20,600   arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/lib/python3.7/dist-packages/numpy/core/include -I/usr/include/python3.7m -c src/cytohmm/markov_chain.c -o build/temp.linux-armv7l-3.7/src/cytohmm/markov_chain.o
2021-04-06T05:15:20,998   In file included from /usr/local/lib/python3.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1944,
2021-04-06T05:15:20,998                    from /usr/local/lib/python3.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2021-04-06T05:15:20,998                    from /usr/local/lib/python3.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
2021-04-06T05:15:20,999                    from src/cytohmm/markov_chain.c:632:
2021-04-06T05:15:20,999   /usr/local/lib/python3.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2021-04-06T05:15:20,999    #warning "Using deprecated NumPy API, disable it with " \
2021-04-06T05:15:20,999     ^~~~~~~
2021-04-06T05:15:31,263   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.7/src/cytohmm/markov_chain.o -o build/lib.linux-armv7l-3.7/cytohmm/markov_chain.cpython-37m-arm-linux-gnueabihf.so
2021-04-06T05:15:31,432   building 'cytohmm.likelihood' extension
2021-04-06T05:15:31,432   arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/lib/python3.7/dist-packages/numpy/core/include -I/usr/include/python3.7m -c src/cytohmm/likelihood.c -o build/temp.linux-armv7l-3.7/src/cytohmm/likelihood.o
2021-04-06T05:15:31,790   In file included from /usr/local/lib/python3.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1944,
2021-04-06T05:15:31,790                    from /usr/local/lib/python3.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2021-04-06T05:15:31,790                    from /usr/local/lib/python3.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
2021-04-06T05:15:31,790                    from src/cytohmm/likelihood.c:632:
2021-04-06T05:15:31,791   /usr/local/lib/python3.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2021-04-06T05:15:31,791    #warning "Using deprecated NumPy API, disable it with " \
2021-04-06T05:15:31,791     ^~~~~~~
2021-04-06T05:15:38,952   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.7/src/cytohmm/likelihood.o -o build/lib.linux-armv7l-3.7/cytohmm/likelihood.cpython-37m-arm-linux-gnueabihf.so
2021-04-06T05:15:39,102   installing to build/bdist.linux-armv7l/wheel
2021-04-06T05:15:39,103   running install
2021-04-06T05:15:39,104   running install_lib
2021-04-06T05:15:39,109   creating build/bdist.linux-armv7l
2021-04-06T05:15:39,110   creating build/bdist.linux-armv7l/wheel
2021-04-06T05:15:39,113   creating build/bdist.linux-armv7l/wheel/cytohmm
2021-04-06T05:15:39,115   copying build/lib.linux-armv7l-3.7/cytohmm/markov_chain.cpython-37m-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/cytohmm
2021-04-06T05:15:39,133   copying build/lib.linux-armv7l-3.7/cytohmm/sequence_segmenter.py -> build/bdist.linux-armv7l/wheel/cytohmm
2021-04-06T05:15:39,137   copying build/lib.linux-armv7l-3.7/cytohmm/likelihood.cpython-37m-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/cytohmm
2021-04-06T05:15:39,148   copying build/lib.linux-armv7l-3.7/cytohmm/__init__.py -> build/bdist.linux-armv7l/wheel/cytohmm
2021-04-06T05:15:39,150   running install_egg_info
2021-04-06T05:15:39,173   running egg_info
2021-04-06T05:15:39,174   writing cytohmm.egg-info/PKG-INFO
2021-04-06T05:15:39,176   writing dependency_links to cytohmm.egg-info/dependency_links.txt
2021-04-06T05:15:39,179   writing requirements to cytohmm.egg-info/requires.txt
2021-04-06T05:15:39,180   writing top-level names to cytohmm.egg-info/top_level.txt
2021-04-06T05:15:39,186   reading manifest file 'cytohmm.egg-info/SOURCES.txt'
2021-04-06T05:15:39,188   reading manifest template 'MANIFEST.in'
2021-04-06T05:15:39,200   writing manifest file 'cytohmm.egg-info/SOURCES.txt'
2021-04-06T05:15:39,202   Copying cytohmm.egg-info to build/bdist.linux-armv7l/wheel/cytohmm-0.1.0-py3.7.egg-info
2021-04-06T05:15:39,220   running install_scripts
2021-04-06T05:15:39,268   adding license file "LICENSE" (matched pattern "LICEN[CS]E*")
2021-04-06T05:15:39,275   creating build/bdist.linux-armv7l/wheel/cytohmm-0.1.0.dist-info/WHEEL
2021-04-06T05:15:39,279   creating '/tmp/pip-wheel-ttdxipwp/cytohmm-0.1.0-cp37-cp37m-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2021-04-06T05:15:39,282   adding 'cytohmm/__init__.py'
2021-04-06T05:15:39,367   adding 'cytohmm/likelihood.cpython-37m-arm-linux-gnueabihf.so'
2021-04-06T05:15:39,473   adding 'cytohmm/markov_chain.cpython-37m-arm-linux-gnueabihf.so'
2021-04-06T05:15:39,478   adding 'cytohmm/sequence_segmenter.py'
2021-04-06T05:15:39,481   adding 'cytohmm-0.1.0.dist-info/LICENSE'
2021-04-06T05:15:39,482   adding 'cytohmm-0.1.0.dist-info/METADATA'
2021-04-06T05:15:39,483   adding 'cytohmm-0.1.0.dist-info/WHEEL'
2021-04-06T05:15:39,484   adding 'cytohmm-0.1.0.dist-info/top_level.txt'
2021-04-06T05:15:39,485   adding 'cytohmm-0.1.0.dist-info/RECORD'
2021-04-06T05:15:39,491   removing build/bdist.linux-armv7l/wheel
2021-04-06T05:15:39,633   Building wheel for cytohmm (setup.py): finished with status 'done'
2021-04-06T05:15:39,639   Created wheel for cytohmm: filename=cytohmm-0.1.0-cp37-cp37m-linux_armv7l.whl size=345432 sha256=e49bcf560b5405c37ff702b7ab0a590b3231fdf5091291b8c62b67acfecb9f08
2021-04-06T05:15:39,639   Stored in directory: /tmp/pip-ephem-wheel-cache-bwj_l2cm/wheels/a6/2d/53/eb398483bde28e84d754160d6952b3ac6e42522b95932a46eb
2021-04-06T05:15:39,649 Successfully built cytohmm
2021-04-06T05:15:39,669 Removed build tracker: '/tmp/pip-req-tracker-e1du6lr9'