2021-04-06T14:19:38,227 DEPRECATION: Python 3.5 reached the end of its life on September 13th, 2020. Please upgrade your Python as Python 3.5 is no longer maintained. pip 21.0 will drop support for Python 3.5 in January 2021. pip 21.0 will remove support for this functionality.
2021-04-06T14:19:38,930 Created temporary directory: /tmp/pip-ephem-wheel-cache-gk58ujgo
2021-04-06T14:19:38,935 Created temporary directory: /tmp/pip-req-tracker-z8apkvid
2021-04-06T14:19:38,936 Initialized build tracking at /tmp/pip-req-tracker-z8apkvid
2021-04-06T14:19:38,936 Created build tracker: /tmp/pip-req-tracker-z8apkvid
2021-04-06T14:19:38,936 Entered build tracker: /tmp/pip-req-tracker-z8apkvid
2021-04-06T14:19:38,938 Created temporary directory: /tmp/pip-wheel-76ziw_ze
2021-04-06T14:19:39,014 1 location(s) to search for versions of ebi-eva-common-pyutils:
2021-04-06T14:19:39,014 * https://pypi.org/simple/ebi-eva-common-pyutils/
2021-04-06T14:19:39,015 Fetching project page and analyzing links: https://pypi.org/simple/ebi-eva-common-pyutils/
2021-04-06T14:19:39,017 Getting page https://pypi.org/simple/ebi-eva-common-pyutils/
2021-04-06T14:19:39,022 Found index url https://pypi.org/simple
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2021-04-06T14:19:39,482 Given no hashes to check 1 links for project 'ebi-eva-common-pyutils': discarding no candidates
2021-04-06T14:19:39,517 Collecting ebi-eva-common-pyutils==0.3.9
2021-04-06T14:19:39,522   Created temporary directory: /tmp/pip-unpack-tim3tk68
2021-04-06T14:19:39,744   Downloading ebi_eva_common_pyutils-0.3.9.tar.gz (17 kB)
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2021-04-06T14:19:40,103     Running setup.py (path:/tmp/pip-wheel-76ziw_ze/ebi-eva-common-pyutils_0fa5f4150ee94b9a8c8069b36ba1b4d6/setup.py) egg_info for package ebi-eva-common-pyutils
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2021-04-06T14:19:40,106     Running command python setup.py egg_info
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2021-04-06T14:19:42,475     writing requirements to /tmp/pip-pip-egg-info-9_793e8u/ebi_eva_common_pyutils.egg-info/requires.txt
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2021-04-06T14:19:42,481     writing dependency_links to /tmp/pip-pip-egg-info-9_793e8u/ebi_eva_common_pyutils.egg-info/dependency_links.txt
2021-04-06T14:19:42,483     writing /tmp/pip-pip-egg-info-9_793e8u/ebi_eva_common_pyutils.egg-info/PKG-INFO
2021-04-06T14:19:42,489     writing manifest file '/tmp/pip-pip-egg-info-9_793e8u/ebi_eva_common_pyutils.egg-info/SOURCES.txt'
2021-04-06T14:19:42,862     reading manifest file '/tmp/pip-pip-egg-info-9_793e8u/ebi_eva_common_pyutils.egg-info/SOURCES.txt'
2021-04-06T14:19:42,872     writing manifest file '/tmp/pip-pip-egg-info-9_793e8u/ebi_eva_common_pyutils.egg-info/SOURCES.txt'
2021-04-06T14:19:43,009   Source in /tmp/pip-wheel-76ziw_ze/ebi-eva-common-pyutils_0fa5f4150ee94b9a8c8069b36ba1b4d6 has version 0.3.9, which satisfies requirement ebi-eva-common-pyutils==0.3.9 from https://files.pythonhosted.org/packages/a0/00/f672fe3d308c365b6991b9cfe044b5328b69026e1aebd93a2b9cfe7803ef/ebi_eva_common_pyutils-0.3.9.tar.gz#sha256=ff242034274d3fc443d905a0e11efd41e55f84fcb7f5080e3954488128829b1e
2021-04-06T14:19:43,011   Removed ebi-eva-common-pyutils==0.3.9 from https://files.pythonhosted.org/packages/a0/00/f672fe3d308c365b6991b9cfe044b5328b69026e1aebd93a2b9cfe7803ef/ebi_eva_common_pyutils-0.3.9.tar.gz#sha256=ff242034274d3fc443d905a0e11efd41e55f84fcb7f5080e3954488128829b1e from build tracker '/tmp/pip-req-tracker-z8apkvid'
2021-04-06T14:19:43,019 Created temporary directory: /tmp/pip-unpack-uclwd7kk
2021-04-06T14:19:43,020 Building wheels for collected packages: ebi-eva-common-pyutils
2021-04-06T14:19:43,029   Created temporary directory: /tmp/pip-wheel-7ehjlwfr
2021-04-06T14:19:43,030   Building wheel for ebi-eva-common-pyutils (setup.py): started
2021-04-06T14:19:43,031   Destination directory: /tmp/pip-wheel-7ehjlwfr
2021-04-06T14:19:43,031   Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-76ziw_ze/ebi-eva-common-pyutils_0fa5f4150ee94b9a8c8069b36ba1b4d6/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-76ziw_ze/ebi-eva-common-pyutils_0fa5f4150ee94b9a8c8069b36ba1b4d6/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-7ehjlwfr
2021-04-06T14:19:47,681   running bdist_wheel
2021-04-06T14:19:47,697   running build
2021-04-06T14:19:47,698   running build_py
2021-04-06T14:19:48,038   creating build
2021-04-06T14:19:48,038   creating build/lib
2021-04-06T14:19:48,040   creating build/lib/ebi_eva_common_pyutils
2021-04-06T14:19:48,044   copying ebi_eva_common_pyutils/pg_utils.py -> build/lib/ebi_eva_common_pyutils
2021-04-06T14:19:48,050   copying ebi_eva_common_pyutils/logger.py -> build/lib/ebi_eva_common_pyutils
2021-04-06T14:19:48,055   copying ebi_eva_common_pyutils/network_utils.py -> build/lib/ebi_eva_common_pyutils
2021-04-06T14:19:48,061   copying ebi_eva_common_pyutils/config.py -> build/lib/ebi_eva_common_pyutils
2021-04-06T14:19:48,068   copying ebi_eva_common_pyutils/command_utils.py -> build/lib/ebi_eva_common_pyutils
2021-04-06T14:19:48,074   copying ebi_eva_common_pyutils/metadata_utils.py -> build/lib/ebi_eva_common_pyutils
2021-04-06T14:19:48,081   copying ebi_eva_common_pyutils/mongo_utils.py -> build/lib/ebi_eva_common_pyutils
2021-04-06T14:19:48,087   copying ebi_eva_common_pyutils/config_utils.py -> build/lib/ebi_eva_common_pyutils
2021-04-06T14:19:48,093   copying ebi_eva_common_pyutils/file_utils.py -> build/lib/ebi_eva_common_pyutils
2021-04-06T14:19:48,100   copying ebi_eva_common_pyutils/common_utils.py -> build/lib/ebi_eva_common_pyutils
2021-04-06T14:19:48,105   copying ebi_eva_common_pyutils/__init__.py -> build/lib/ebi_eva_common_pyutils
2021-04-06T14:19:48,111   creating build/lib/ebi_eva_common_pyutils/nextflow
2021-04-06T14:19:48,114   copying ebi_eva_common_pyutils/nextflow/linear_pipeline.py -> build/lib/ebi_eva_common_pyutils/nextflow
2021-04-06T14:19:48,119   copying ebi_eva_common_pyutils/nextflow/__init__.py -> build/lib/ebi_eva_common_pyutils/nextflow
2021-04-06T14:19:48,124   creating build/lib/ebi_eva_common_pyutils/variation
2021-04-06T14:19:48,127   copying ebi_eva_common_pyutils/variation/contig_utils.py -> build/lib/ebi_eva_common_pyutils/variation
2021-04-06T14:19:48,132   copying ebi_eva_common_pyutils/variation/assembly_utils.py -> build/lib/ebi_eva_common_pyutils/variation
2021-04-06T14:19:48,137   copying ebi_eva_common_pyutils/variation/__init__.py -> build/lib/ebi_eva_common_pyutils/variation
2021-04-06T14:19:48,144   creating build/lib/ebi_eva_common_pyutils/mongodb
2021-04-06T14:19:48,147   copying ebi_eva_common_pyutils/mongodb/mongo_database.py -> build/lib/ebi_eva_common_pyutils/mongodb
2021-04-06T14:19:48,156   copying ebi_eva_common_pyutils/mongodb/__init__.py -> build/lib/ebi_eva_common_pyutils/mongodb
2021-04-06T14:19:48,162   creating build/lib/ebi_eva_common_pyutils/taxonomy
2021-04-06T14:19:48,165   copying ebi_eva_common_pyutils/taxonomy/taxonomy.py -> build/lib/ebi_eva_common_pyutils/taxonomy
2021-04-06T14:19:48,172   copying ebi_eva_common_pyutils/taxonomy/__init__.py -> build/lib/ebi_eva_common_pyutils/taxonomy
2021-04-06T14:19:48,179   creating build/lib/ebi_eva_common_pyutils/assembly
2021-04-06T14:19:48,181   copying ebi_eva_common_pyutils/assembly/assembly.py -> build/lib/ebi_eva_common_pyutils/assembly
2021-04-06T14:19:48,187   copying ebi_eva_common_pyutils/assembly/__init__.py -> build/lib/ebi_eva_common_pyutils/assembly
2021-04-06T14:19:48,212   installing to build/bdist.linux-armv7l/wheel
2021-04-06T14:19:48,213   running install
2021-04-06T14:19:48,216   running install_lib
2021-04-06T14:19:48,226   creating build/bdist.linux-armv7l
2021-04-06T14:19:48,227   creating build/bdist.linux-armv7l/wheel
2021-04-06T14:19:48,231   creating build/bdist.linux-armv7l/wheel/ebi_eva_common_pyutils
2021-04-06T14:19:48,233   copying build/lib/ebi_eva_common_pyutils/pg_utils.py -> build/bdist.linux-armv7l/wheel/ebi_eva_common_pyutils
2021-04-06T14:19:48,239   copying build/lib/ebi_eva_common_pyutils/logger.py -> build/bdist.linux-armv7l/wheel/ebi_eva_common_pyutils
2021-04-06T14:19:48,246   copying build/lib/ebi_eva_common_pyutils/network_utils.py -> build/bdist.linux-armv7l/wheel/ebi_eva_common_pyutils
2021-04-06T14:19:48,253   creating build/bdist.linux-armv7l/wheel/ebi_eva_common_pyutils/nextflow
2021-04-06T14:19:48,256   copying build/lib/ebi_eva_common_pyutils/nextflow/linear_pipeline.py -> build/bdist.linux-armv7l/wheel/ebi_eva_common_pyutils/nextflow
2021-04-06T14:19:48,262   copying build/lib/ebi_eva_common_pyutils/nextflow/__init__.py -> build/bdist.linux-armv7l/wheel/ebi_eva_common_pyutils/nextflow
2021-04-06T14:19:48,268   copying build/lib/ebi_eva_common_pyutils/config.py -> build/bdist.linux-armv7l/wheel/ebi_eva_common_pyutils
2021-04-06T14:19:48,275   creating build/bdist.linux-armv7l/wheel/ebi_eva_common_pyutils/variation
2021-04-06T14:19:48,278   copying build/lib/ebi_eva_common_pyutils/variation/contig_utils.py -> build/bdist.linux-armv7l/wheel/ebi_eva_common_pyutils/variation
2021-04-06T14:19:48,285   copying build/lib/ebi_eva_common_pyutils/variation/assembly_utils.py -> build/bdist.linux-armv7l/wheel/ebi_eva_common_pyutils/variation
2021-04-06T14:19:48,290   copying build/lib/ebi_eva_common_pyutils/variation/__init__.py -> build/bdist.linux-armv7l/wheel/ebi_eva_common_pyutils/variation
2021-04-06T14:19:48,297   creating build/bdist.linux-armv7l/wheel/ebi_eva_common_pyutils/mongodb
2021-04-06T14:19:48,299   copying build/lib/ebi_eva_common_pyutils/mongodb/mongo_database.py -> build/bdist.linux-armv7l/wheel/ebi_eva_common_pyutils/mongodb
2021-04-06T14:19:48,306   copying build/lib/ebi_eva_common_pyutils/mongodb/__init__.py -> build/bdist.linux-armv7l/wheel/ebi_eva_common_pyutils/mongodb
2021-04-06T14:19:48,312   copying build/lib/ebi_eva_common_pyutils/command_utils.py -> build/bdist.linux-armv7l/wheel/ebi_eva_common_pyutils
2021-04-06T14:19:48,318   copying build/lib/ebi_eva_common_pyutils/metadata_utils.py -> build/bdist.linux-armv7l/wheel/ebi_eva_common_pyutils
2021-04-06T14:19:48,325   creating build/bdist.linux-armv7l/wheel/ebi_eva_common_pyutils/taxonomy
2021-04-06T14:19:48,327   copying build/lib/ebi_eva_common_pyutils/taxonomy/taxonomy.py -> build/bdist.linux-armv7l/wheel/ebi_eva_common_pyutils/taxonomy
2021-04-06T14:19:48,333   copying build/lib/ebi_eva_common_pyutils/taxonomy/__init__.py -> build/bdist.linux-armv7l/wheel/ebi_eva_common_pyutils/taxonomy
2021-04-06T14:19:48,338   copying build/lib/ebi_eva_common_pyutils/mongo_utils.py -> build/bdist.linux-armv7l/wheel/ebi_eva_common_pyutils
2021-04-06T14:19:48,343   copying build/lib/ebi_eva_common_pyutils/config_utils.py -> build/bdist.linux-armv7l/wheel/ebi_eva_common_pyutils
2021-04-06T14:19:48,349   copying build/lib/ebi_eva_common_pyutils/file_utils.py -> build/bdist.linux-armv7l/wheel/ebi_eva_common_pyutils
2021-04-06T14:19:48,355   copying build/lib/ebi_eva_common_pyutils/common_utils.py -> build/bdist.linux-armv7l/wheel/ebi_eva_common_pyutils
2021-04-06T14:19:48,362   creating build/bdist.linux-armv7l/wheel/ebi_eva_common_pyutils/assembly
2021-04-06T14:19:48,364   copying build/lib/ebi_eva_common_pyutils/assembly/assembly.py -> build/bdist.linux-armv7l/wheel/ebi_eva_common_pyutils/assembly
2021-04-06T14:19:48,372   copying build/lib/ebi_eva_common_pyutils/assembly/__init__.py -> build/bdist.linux-armv7l/wheel/ebi_eva_common_pyutils/assembly
2021-04-06T14:19:48,378   copying build/lib/ebi_eva_common_pyutils/__init__.py -> build/bdist.linux-armv7l/wheel/ebi_eva_common_pyutils
2021-04-06T14:19:48,382   running install_egg_info
2021-04-06T14:19:48,437   running egg_info
2021-04-06T14:19:48,440   writing requirements to ebi_eva_common_pyutils.egg-info/requires.txt
2021-04-06T14:19:48,442   writing top-level names to ebi_eva_common_pyutils.egg-info/top_level.txt
2021-04-06T14:19:48,444   writing dependency_links to ebi_eva_common_pyutils.egg-info/dependency_links.txt
2021-04-06T14:19:48,448   writing ebi_eva_common_pyutils.egg-info/PKG-INFO
2021-04-06T14:19:48,465   reading manifest file 'ebi_eva_common_pyutils.egg-info/SOURCES.txt'
2021-04-06T14:19:48,477   writing manifest file 'ebi_eva_common_pyutils.egg-info/SOURCES.txt'
2021-04-06T14:19:48,481   Copying ebi_eva_common_pyutils.egg-info to build/bdist.linux-armv7l/wheel/ebi_eva_common_pyutils-0.3.9-py3.5.egg-info
2021-04-06T14:19:48,507   running install_scripts
2021-04-06T14:19:48,718   creating build/bdist.linux-armv7l/wheel/ebi_eva_common_pyutils-0.3.9.dist-info/WHEEL
2021-04-06T14:19:49,044   Building wheel for ebi-eva-common-pyutils (setup.py): finished with status 'done'
2021-04-06T14:19:49,181   Created wheel for ebi-eva-common-pyutils: filename=ebi_eva_common_pyutils-0.3.9-py3-none-any.whl size=28468 sha256=74f1d02081b402d693854a3873dc38e98524e9ff2cf493840627e5a34b477880
2021-04-06T14:19:49,182   Stored in directory: /tmp/pip-ephem-wheel-cache-gk58ujgo/wheels/13/f1/f8/11fc75329106f93a4c3c979d5983410acf2ce5e86e5fb87058
2021-04-06T14:19:49,210 Successfully built ebi-eva-common-pyutils
2021-04-06T14:19:49,219 Removed build tracker: '/tmp/pip-req-tracker-z8apkvid'