2021-04-20T14:07:48,637 Created temporary directory: /tmp/pip-ephem-wheel-cache-oygj01gb 2021-04-20T14:07:48,640 Created temporary directory: /tmp/pip-req-tracker-fnsuduuf 2021-04-20T14:07:48,641 Initialized build tracking at /tmp/pip-req-tracker-fnsuduuf 2021-04-20T14:07:48,641 Created build tracker: /tmp/pip-req-tracker-fnsuduuf 2021-04-20T14:07:48,641 Entered build tracker: /tmp/pip-req-tracker-fnsuduuf 2021-04-20T14:07:48,642 Created temporary directory: /tmp/pip-wheel-2zu9_6m8 2021-04-20T14:07:48,669 1 location(s) to search for versions of ncbitaxonomy: 2021-04-20T14:07:48,669 * https://pypi.org/simple/ncbitaxonomy/ 2021-04-20T14:07:48,669 Fetching project page and analyzing links: https://pypi.org/simple/ncbitaxonomy/ 2021-04-20T14:07:48,670 Getting page https://pypi.org/simple/ncbitaxonomy/ 2021-04-20T14:07:48,672 Found index url https://pypi.org/simple 2021-04-20T14:07:48,673 Getting credentials from keyring for https://pypi.org/simple 2021-04-20T14:07:49,015 Loading KWallet 2021-04-20T14:07:49,040 Loading SecretService 2021-04-20T14:07:49,085 Loading Windows 2021-04-20T14:07:49,088 Loading chainer 2021-04-20T14:07:49,090 Loading macOS 2021-04-20T14:07:49,093 Loading Gnome 2021-04-20T14:07:49,132 Loading Google 2021-04-20T14:07:49,136 Loading Windows (alt) 2021-04-20T14:07:49,142 Loading file 2021-04-20T14:07:49,143 Loading keyczar 2021-04-20T14:07:49,144 Loading multi 2021-04-20T14:07:49,145 Loading pyfs 2021-04-20T14:07:49,183 Getting credentials from keyring for pypi.org 2021-04-20T14:07:49,272 Found link https://files.pythonhosted.org/packages/bc/08/65c3f5bf4eea253b80cad47b6c72d8718fd67ea4ce93d4aeeab47bd359dd/ncbitaxonomy-3.1.2.tar.gz#sha256=b6e76ae47e6b37a7ad2ea88c6d13213a653a42b2792c9d409a886c211fa4417f (from https://pypi.org/simple/ncbitaxonomy/), version: 3.1.2 2021-04-20T14:07:49,273 Found link https://files.pythonhosted.org/packages/2a/ea/697a8bf4b02ea32204cbf7291ab96759f637a1d012c4dc9bac2010f1d33a/ncbitaxonomy-3.1.2.post1.tar.gz#sha256=7039711b699a2b79970b1a0b61baa061aad8c57b37666d5bdda4972fc945ac5c (from https://pypi.org/simple/ncbitaxonomy/) (requires-python:>=3.5.2), version: 3.1.2.post1 2021-04-20T14:07:49,287 Given no hashes to check 1 links for project 'ncbitaxonomy': discarding no candidates 2021-04-20T14:07:49,302 Collecting ncbitaxonomy==3.1.2.post1 2021-04-20T14:07:49,304 Created temporary directory: /tmp/pip-unpack-sqfa1u33 2021-04-20T14:07:49,305 Getting credentials from keyring for files.pythonhosted.org 2021-04-20T14:07:49,504 Downloading ncbitaxonomy-3.1.2.post1.tar.gz (71 kB) 2021-04-20T14:07:49,616 Added ncbitaxonomy==3.1.2.post1 from https://files.pythonhosted.org/packages/2a/ea/697a8bf4b02ea32204cbf7291ab96759f637a1d012c4dc9bac2010f1d33a/ncbitaxonomy-3.1.2.post1.tar.gz#sha256=7039711b699a2b79970b1a0b61baa061aad8c57b37666d5bdda4972fc945ac5c to build tracker '/tmp/pip-req-tracker-fnsuduuf' 2021-04-20T14:07:49,618 Running setup.py (path:/tmp/pip-wheel-2zu9_6m8/ncbitaxonomy_b0eca86f72e24b2eb1b4331e0b7d4d60/setup.py) egg_info for package ncbitaxonomy 2021-04-20T14:07:49,618 Created temporary directory: /tmp/pip-pip-egg-info-tr40qg7y 2021-04-20T14:07:49,619 Running command python setup.py egg_info 2021-04-20T14:07:50,606 running egg_info 2021-04-20T14:07:50,608 creating /tmp/pip-pip-egg-info-tr40qg7y/ncbitaxonomy.egg-info 2021-04-20T14:07:50,610 writing /tmp/pip-pip-egg-info-tr40qg7y/ncbitaxonomy.egg-info/PKG-INFO 2021-04-20T14:07:50,613 writing dependency_links to /tmp/pip-pip-egg-info-tr40qg7y/ncbitaxonomy.egg-info/dependency_links.txt 2021-04-20T14:07:50,616 writing requirements to /tmp/pip-pip-egg-info-tr40qg7y/ncbitaxonomy.egg-info/requires.txt 2021-04-20T14:07:50,617 writing top-level names to /tmp/pip-pip-egg-info-tr40qg7y/ncbitaxonomy.egg-info/top_level.txt 2021-04-20T14:07:50,619 writing manifest file '/tmp/pip-pip-egg-info-tr40qg7y/ncbitaxonomy.egg-info/SOURCES.txt' 2021-04-20T14:07:50,763 reading manifest file '/tmp/pip-pip-egg-info-tr40qg7y/ncbitaxonomy.egg-info/SOURCES.txt' 2021-04-20T14:07:50,765 reading manifest template 'MANIFEST.in' 2021-04-20T14:07:50,766 /usr/local/lib/python3.7/dist-packages/setuptools/dist.py:461: UserWarning: Normalizing '3.1.2-1' to '3.1.2.post1' 2021-04-20T14:07:50,767 warnings.warn(tmpl.format(**locals())) 2021-04-20T14:07:50,767 no previously-included directories found matching 'build' 2021-04-20T14:07:50,767 no previously-included directories found matching 'docs' 2021-04-20T14:07:50,769 writing manifest file '/tmp/pip-pip-egg-info-tr40qg7y/ncbitaxonomy.egg-info/SOURCES.txt' 2021-04-20T14:07:50,830 Source in /tmp/pip-wheel-2zu9_6m8/ncbitaxonomy_b0eca86f72e24b2eb1b4331e0b7d4d60 has version 3.1.2.post1, which satisfies requirement ncbitaxonomy==3.1.2.post1 from https://files.pythonhosted.org/packages/2a/ea/697a8bf4b02ea32204cbf7291ab96759f637a1d012c4dc9bac2010f1d33a/ncbitaxonomy-3.1.2.post1.tar.gz#sha256=7039711b699a2b79970b1a0b61baa061aad8c57b37666d5bdda4972fc945ac5c 2021-04-20T14:07:50,831 Removed ncbitaxonomy==3.1.2.post1 from https://files.pythonhosted.org/packages/2a/ea/697a8bf4b02ea32204cbf7291ab96759f637a1d012c4dc9bac2010f1d33a/ncbitaxonomy-3.1.2.post1.tar.gz#sha256=7039711b699a2b79970b1a0b61baa061aad8c57b37666d5bdda4972fc945ac5c from build tracker '/tmp/pip-req-tracker-fnsuduuf' 2021-04-20T14:07:50,837 Created temporary directory: /tmp/pip-unpack-9h398vhw 2021-04-20T14:07:50,838 Building wheels for collected packages: ncbitaxonomy 2021-04-20T14:07:50,843 Created temporary directory: /tmp/pip-wheel-pp5x5evx 2021-04-20T14:07:50,844 Building wheel for ncbitaxonomy (setup.py): started 2021-04-20T14:07:50,844 Destination directory: /tmp/pip-wheel-pp5x5evx 2021-04-20T14:07:50,844 Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-2zu9_6m8/ncbitaxonomy_b0eca86f72e24b2eb1b4331e0b7d4d60/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-2zu9_6m8/ncbitaxonomy_b0eca86f72e24b2eb1b4331e0b7d4d60/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-pp5x5evx 2021-04-20T14:07:51,836 /usr/local/lib/python3.7/dist-packages/setuptools/dist.py:461: UserWarning: Normalizing '3.1.2-1' to '3.1.2.post1' 2021-04-20T14:07:51,837 warnings.warn(tmpl.format(**locals())) 2021-04-20T14:07:51,868 running bdist_wheel 2021-04-20T14:07:51,876 running build 2021-04-20T14:07:51,876 running build_py 2021-04-20T14:07:52,011 creating build 2021-04-20T14:07:52,012 creating build/lib 2021-04-20T14:07:52,013 creating build/lib/ncbitaxonomy 2021-04-20T14:07:52,015 copying ncbitaxonomy/utils.py -> build/lib/ncbitaxonomy 2021-04-20T14:07:52,018 copying ncbitaxonomy/__init__.py -> build/lib/ncbitaxonomy 2021-04-20T14:07:52,021 copying ncbitaxonomy/citation.py -> build/lib/ncbitaxonomy 2021-04-20T14:07:52,024 creating build/lib/ncbitaxonomy/ncbi_taxonomy 2021-04-20T14:07:52,026 copying ncbitaxonomy/ncbi_taxonomy/__init__.py -> build/lib/ncbitaxonomy/ncbi_taxonomy 2021-04-20T14:07:52,029 copying ncbitaxonomy/ncbi_taxonomy/ncbiquery.py -> build/lib/ncbitaxonomy/ncbi_taxonomy 2021-04-20T14:07:52,034 creating build/lib/ncbitaxonomy/parser 2021-04-20T14:07:52,035 copying ncbitaxonomy/parser/__init__.py -> build/lib/ncbitaxonomy/parser 2021-04-20T14:07:52,038 copying ncbitaxonomy/parser/paml.py -> build/lib/ncbitaxonomy/parser 2021-04-20T14:07:52,041 copying ncbitaxonomy/parser/newick.py -> build/lib/ncbitaxonomy/parser 2021-04-20T14:07:52,045 copying ncbitaxonomy/parser/fasta.py -> build/lib/ncbitaxonomy/parser 2021-04-20T14:07:52,048 copying ncbitaxonomy/parser/phylip.py -> build/lib/ncbitaxonomy/parser 2021-04-20T14:07:52,053 creating build/lib/ncbitaxonomy/coretype 2021-04-20T14:07:52,054 copying ncbitaxonomy/coretype/__init__.py -> build/lib/ncbitaxonomy/coretype 2021-04-20T14:07:52,058 copying ncbitaxonomy/coretype/seqgroup.py -> build/lib/ncbitaxonomy/coretype 2021-04-20T14:07:52,061 copying ncbitaxonomy/coretype/tree.py -> build/lib/ncbitaxonomy/coretype 2021-04-20T14:07:52,068 creating build/lib/ncbitaxonomy/phylo 2021-04-20T14:07:52,070 copying ncbitaxonomy/phylo/__init__.py -> build/lib/ncbitaxonomy/phylo 2021-04-20T14:07:52,073 copying ncbitaxonomy/phylo/evolevents.py -> build/lib/ncbitaxonomy/phylo 2021-04-20T14:07:52,076 copying ncbitaxonomy/phylo/phylotree.py -> build/lib/ncbitaxonomy/phylo 2021-04-20T14:07:52,080 copying ncbitaxonomy/phylo/spoverlap.py -> build/lib/ncbitaxonomy/phylo 2021-04-20T14:07:52,083 copying ncbitaxonomy/phylo/reconciliation.py -> build/lib/ncbitaxonomy/phylo 2021-04-20T14:07:52,086 running egg_info 2021-04-20T14:07:52,103 writing ncbitaxonomy.egg-info/PKG-INFO 2021-04-20T14:07:52,105 writing dependency_links to ncbitaxonomy.egg-info/dependency_links.txt 2021-04-20T14:07:52,108 writing requirements to ncbitaxonomy.egg-info/requires.txt 2021-04-20T14:07:52,110 writing top-level names to ncbitaxonomy.egg-info/top_level.txt 2021-04-20T14:07:52,118 reading manifest file 'ncbitaxonomy.egg-info/SOURCES.txt' 2021-04-20T14:07:52,121 reading manifest template 'MANIFEST.in' 2021-04-20T14:07:52,123 no previously-included directories found matching 'build' 2021-04-20T14:07:52,124 no previously-included directories found matching 'docs' 2021-04-20T14:07:52,128 writing manifest file 'ncbitaxonomy.egg-info/SOURCES.txt' 2021-04-20T14:07:52,138 installing to build/bdist.linux-armv7l/wheel 2021-04-20T14:07:52,138 running install 2021-04-20T14:07:52,140 running install_lib 2021-04-20T14:07:52,144 creating build/bdist.linux-armv7l 2021-04-20T14:07:52,145 creating build/bdist.linux-armv7l/wheel 2021-04-20T14:07:52,148 creating build/bdist.linux-armv7l/wheel/ncbitaxonomy 2021-04-20T14:07:52,149 copying build/lib/ncbitaxonomy/utils.py -> build/bdist.linux-armv7l/wheel/ncbitaxonomy 2021-04-20T14:07:52,152 copying build/lib/ncbitaxonomy/__init__.py -> build/bdist.linux-armv7l/wheel/ncbitaxonomy 2021-04-20T14:07:52,155 copying build/lib/ncbitaxonomy/citation.py -> build/bdist.linux-armv7l/wheel/ncbitaxonomy 2021-04-20T14:07:52,159 creating build/bdist.linux-armv7l/wheel/ncbitaxonomy/ncbi_taxonomy 2021-04-20T14:07:52,160 copying build/lib/ncbitaxonomy/ncbi_taxonomy/__init__.py -> build/bdist.linux-armv7l/wheel/ncbitaxonomy/ncbi_taxonomy 2021-04-20T14:07:52,163 copying build/lib/ncbitaxonomy/ncbi_taxonomy/ncbiquery.py -> build/bdist.linux-armv7l/wheel/ncbitaxonomy/ncbi_taxonomy 2021-04-20T14:07:52,168 creating build/bdist.linux-armv7l/wheel/ncbitaxonomy/parser 2021-04-20T14:07:52,170 copying build/lib/ncbitaxonomy/parser/__init__.py -> build/bdist.linux-armv7l/wheel/ncbitaxonomy/parser 2021-04-20T14:07:52,173 copying build/lib/ncbitaxonomy/parser/paml.py -> build/bdist.linux-armv7l/wheel/ncbitaxonomy/parser 2021-04-20T14:07:52,177 copying build/lib/ncbitaxonomy/parser/newick.py -> build/bdist.linux-armv7l/wheel/ncbitaxonomy/parser 2021-04-20T14:07:52,181 copying build/lib/ncbitaxonomy/parser/fasta.py -> build/bdist.linux-armv7l/wheel/ncbitaxonomy/parser 2021-04-20T14:07:52,184 copying build/lib/ncbitaxonomy/parser/phylip.py -> build/bdist.linux-armv7l/wheel/ncbitaxonomy/parser 2021-04-20T14:07:52,189 creating build/bdist.linux-armv7l/wheel/ncbitaxonomy/coretype 2021-04-20T14:07:52,190 copying build/lib/ncbitaxonomy/coretype/__init__.py -> build/bdist.linux-armv7l/wheel/ncbitaxonomy/coretype 2021-04-20T14:07:52,194 copying build/lib/ncbitaxonomy/coretype/seqgroup.py -> build/bdist.linux-armv7l/wheel/ncbitaxonomy/coretype 2021-04-20T14:07:52,197 copying build/lib/ncbitaxonomy/coretype/tree.py -> build/bdist.linux-armv7l/wheel/ncbitaxonomy/coretype 2021-04-20T14:07:52,205 creating build/bdist.linux-armv7l/wheel/ncbitaxonomy/phylo 2021-04-20T14:07:52,207 copying build/lib/ncbitaxonomy/phylo/__init__.py -> build/bdist.linux-armv7l/wheel/ncbitaxonomy/phylo 2021-04-20T14:07:52,210 copying build/lib/ncbitaxonomy/phylo/evolevents.py -> build/bdist.linux-armv7l/wheel/ncbitaxonomy/phylo 2021-04-20T14:07:52,213 copying build/lib/ncbitaxonomy/phylo/phylotree.py -> build/bdist.linux-armv7l/wheel/ncbitaxonomy/phylo 2021-04-20T14:07:52,217 copying build/lib/ncbitaxonomy/phylo/spoverlap.py -> build/bdist.linux-armv7l/wheel/ncbitaxonomy/phylo 2021-04-20T14:07:52,220 copying build/lib/ncbitaxonomy/phylo/reconciliation.py -> build/bdist.linux-armv7l/wheel/ncbitaxonomy/phylo 2021-04-20T14:07:52,223 running install_egg_info 2021-04-20T14:07:52,233 Copying ncbitaxonomy.egg-info to build/bdist.linux-armv7l/wheel/ncbitaxonomy-3.1.2.post1-py3.7.egg-info 2021-04-20T14:07:52,252 running install_scripts 2021-04-20T14:07:52,332 adding license file "LICENSE.md" (matched pattern "LICEN[CS]E*") 2021-04-20T14:07:52,342 creating build/bdist.linux-armv7l/wheel/ncbitaxonomy-3.1.2.post1.dist-info/WHEEL 2021-04-20T14:07:52,345 creating '/tmp/pip-wheel-pp5x5evx/ncbitaxonomy-3.1.2.post1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2021-04-20T14:07:52,349 adding 'ncbitaxonomy/__init__.py' 2021-04-20T14:07:52,351 adding 'ncbitaxonomy/citation.py' 2021-04-20T14:07:52,354 adding 'ncbitaxonomy/utils.py' 2021-04-20T14:07:52,357 adding 'ncbitaxonomy/coretype/__init__.py' 2021-04-20T14:07:52,359 adding 'ncbitaxonomy/coretype/seqgroup.py' 2021-04-20T14:07:52,374 adding 'ncbitaxonomy/coretype/tree.py' 2021-04-20T14:07:52,377 adding 'ncbitaxonomy/ncbi_taxonomy/__init__.py' 2021-04-20T14:07:52,382 adding 'ncbitaxonomy/ncbi_taxonomy/ncbiquery.py' 2021-04-20T14:07:52,384 adding 'ncbitaxonomy/parser/__init__.py' 2021-04-20T14:07:52,386 adding 'ncbitaxonomy/parser/fasta.py' 2021-04-20T14:07:52,390 adding 'ncbitaxonomy/parser/newick.py' 2021-04-20T14:07:52,392 adding 'ncbitaxonomy/parser/paml.py' 2021-04-20T14:07:52,394 adding 'ncbitaxonomy/parser/phylip.py' 2021-04-20T14:07:52,397 adding 'ncbitaxonomy/phylo/__init__.py' 2021-04-20T14:07:52,399 adding 'ncbitaxonomy/phylo/evolevents.py' 2021-04-20T14:07:52,403 adding 'ncbitaxonomy/phylo/phylotree.py' 2021-04-20T14:07:52,406 adding 'ncbitaxonomy/phylo/reconciliation.py' 2021-04-20T14:07:52,408 adding 'ncbitaxonomy/phylo/spoverlap.py' 2021-04-20T14:07:52,416 adding 'ncbitaxonomy-3.1.2.post1.dist-info/LICENSE.md' 2021-04-20T14:07:52,418 adding 'ncbitaxonomy-3.1.2.post1.dist-info/METADATA' 2021-04-20T14:07:52,420 adding 'ncbitaxonomy-3.1.2.post1.dist-info/WHEEL' 2021-04-20T14:07:52,421 adding 'ncbitaxonomy-3.1.2.post1.dist-info/top_level.txt' 2021-04-20T14:07:52,422 adding 'ncbitaxonomy-3.1.2.post1.dist-info/RECORD' 2021-04-20T14:07:52,426 removing build/bdist.linux-armv7l/wheel 2021-04-20T14:07:52,507 Building wheel for ncbitaxonomy (setup.py): finished with status 'done' 2021-04-20T14:07:52,510 Created wheel for ncbitaxonomy: filename=ncbitaxonomy-3.1.2.post1-py3-none-any.whl size=88319 sha256=3ffbdf8e7a8c49c049910b8dfb79b4ef6e274a558e41a3d567a60983195da820 2021-04-20T14:07:52,511 Stored in directory: /tmp/pip-ephem-wheel-cache-oygj01gb/wheels/b5/d9/db/84d6b051acb627704d63b477bbb21f062e2538e1924664f3df 2021-04-20T14:07:52,522 Successfully built ncbitaxonomy 2021-04-20T14:07:52,528 Removed build tracker: '/tmp/pip-req-tracker-fnsuduuf'