2021-04-21T09:58:29,556 DEPRECATION: Python 3.5 reached the end of its life on September 13th, 2020. Please upgrade your Python as Python 3.5 is no longer maintained. pip 21.0 will drop support for Python 3.5 in January 2021. pip 21.0 will remove support for this functionality.
2021-04-21T09:58:30,251 Created temporary directory: /tmp/pip-ephem-wheel-cache-_dwvgntt
2021-04-21T09:58:30,256 Created temporary directory: /tmp/pip-req-tracker-2vk8z_7f
2021-04-21T09:58:30,257 Initialized build tracking at /tmp/pip-req-tracker-2vk8z_7f
2021-04-21T09:58:30,258 Created build tracker: /tmp/pip-req-tracker-2vk8z_7f
2021-04-21T09:58:30,258 Entered build tracker: /tmp/pip-req-tracker-2vk8z_7f
2021-04-21T09:58:30,260 Created temporary directory: /tmp/pip-wheel-eqwkrvj5
2021-04-21T09:58:30,322 1 location(s) to search for versions of ncbitaxonomy:
2021-04-21T09:58:30,322 * https://pypi.org/simple/ncbitaxonomy/
2021-04-21T09:58:30,323 Fetching project page and analyzing links: https://pypi.org/simple/ncbitaxonomy/
2021-04-21T09:58:30,326 Getting page https://pypi.org/simple/ncbitaxonomy/
2021-04-21T09:58:30,330 Found index url https://pypi.org/simple
2021-04-21T09:58:30,645   Found link https://files.pythonhosted.org/packages/bc/08/65c3f5bf4eea253b80cad47b6c72d8718fd67ea4ce93d4aeeab47bd359dd/ncbitaxonomy-3.1.2.tar.gz#sha256=b6e76ae47e6b37a7ad2ea88c6d13213a653a42b2792c9d409a886c211fa4417f (from https://pypi.org/simple/ncbitaxonomy/), version: 3.1.2
2021-04-21T09:58:30,647   Found link https://files.pythonhosted.org/packages/2a/ea/697a8bf4b02ea32204cbf7291ab96759f637a1d012c4dc9bac2010f1d33a/ncbitaxonomy-3.1.2.post1.tar.gz#sha256=7039711b699a2b79970b1a0b61baa061aad8c57b37666d5bdda4972fc945ac5c (from https://pypi.org/simple/ncbitaxonomy/) (requires-python:>=3.5.2), version: 3.1.2.post1
2021-04-21T09:58:30,648   Found link https://files.pythonhosted.org/packages/de/f4/e012c3805435f40eb5b516b7253a9830e2ac9b8df8042acb4f5525986062/ncbitaxonomy-3.1.2.post2.tar.gz#sha256=de61ebb296014200a4968f39b2f315f1a3e766a97cc5c6681d4a6814deb271e9 (from https://pypi.org/simple/ncbitaxonomy/) (requires-python:>=3.5.2), version: 3.1.2.post2
2021-04-21T09:58:30,678 Given no hashes to check 1 links for project 'ncbitaxonomy': discarding no candidates
2021-04-21T09:58:30,711 Collecting ncbitaxonomy==3.1.2.post2
2021-04-21T09:58:30,715   Created temporary directory: /tmp/pip-unpack-j4eu3cec
2021-04-21T09:58:30,958   Downloading ncbitaxonomy-3.1.2.post2.tar.gz (72 kB)
2021-04-21T09:58:31,207   Added ncbitaxonomy==3.1.2.post2 from https://files.pythonhosted.org/packages/de/f4/e012c3805435f40eb5b516b7253a9830e2ac9b8df8042acb4f5525986062/ncbitaxonomy-3.1.2.post2.tar.gz#sha256=de61ebb296014200a4968f39b2f315f1a3e766a97cc5c6681d4a6814deb271e9 to build tracker '/tmp/pip-req-tracker-2vk8z_7f'
2021-04-21T09:58:31,210     Running setup.py (path:/tmp/pip-wheel-eqwkrvj5/ncbitaxonomy_108fa46df5e040a5955a9b36f175c887/setup.py) egg_info for package ncbitaxonomy
2021-04-21T09:58:31,211     Created temporary directory: /tmp/pip-pip-egg-info-qo3tpb58
2021-04-21T09:58:31,212     Running command python setup.py egg_info
2021-04-21T09:58:33,423     running egg_info
2021-04-21T09:58:33,428     creating /tmp/pip-pip-egg-info-qo3tpb58/ncbitaxonomy.egg-info
2021-04-21T09:58:33,430     writing top-level names to /tmp/pip-pip-egg-info-qo3tpb58/ncbitaxonomy.egg-info/top_level.txt
2021-04-21T09:58:33,434     writing requirements to /tmp/pip-pip-egg-info-qo3tpb58/ncbitaxonomy.egg-info/requires.txt
2021-04-21T09:58:33,436     writing /tmp/pip-pip-egg-info-qo3tpb58/ncbitaxonomy.egg-info/PKG-INFO
2021-04-21T09:58:33,442     writing dependency_links to /tmp/pip-pip-egg-info-qo3tpb58/ncbitaxonomy.egg-info/dependency_links.txt
2021-04-21T09:58:33,448     writing manifest file '/tmp/pip-pip-egg-info-qo3tpb58/ncbitaxonomy.egg-info/SOURCES.txt'
2021-04-21T09:58:34,068     reading manifest file '/tmp/pip-pip-egg-info-qo3tpb58/ncbitaxonomy.egg-info/SOURCES.txt'
2021-04-21T09:58:34,073     reading manifest template 'MANIFEST.in'
2021-04-21T09:58:34,077     /usr/local/lib/python3.5/dist-packages/setuptools/dist.py:452: UserWarning: Normalizing '3.1.2-2' to '3.1.2.post2'
2021-04-21T09:58:34,078       warnings.warn(tmpl.format(**locals()))
2021-04-21T09:58:34,079     no previously-included directories found matching 'build'
2021-04-21T09:58:34,079     no previously-included directories found matching 'docs'
2021-04-21T09:58:34,084     writing manifest file '/tmp/pip-pip-egg-info-qo3tpb58/ncbitaxonomy.egg-info/SOURCES.txt'
2021-04-21T09:58:34,220   Source in /tmp/pip-wheel-eqwkrvj5/ncbitaxonomy_108fa46df5e040a5955a9b36f175c887 has version 3.1.2.post2, which satisfies requirement ncbitaxonomy==3.1.2.post2 from https://files.pythonhosted.org/packages/de/f4/e012c3805435f40eb5b516b7253a9830e2ac9b8df8042acb4f5525986062/ncbitaxonomy-3.1.2.post2.tar.gz#sha256=de61ebb296014200a4968f39b2f315f1a3e766a97cc5c6681d4a6814deb271e9
2021-04-21T09:58:34,222   Removed ncbitaxonomy==3.1.2.post2 from https://files.pythonhosted.org/packages/de/f4/e012c3805435f40eb5b516b7253a9830e2ac9b8df8042acb4f5525986062/ncbitaxonomy-3.1.2.post2.tar.gz#sha256=de61ebb296014200a4968f39b2f315f1a3e766a97cc5c6681d4a6814deb271e9 from build tracker '/tmp/pip-req-tracker-2vk8z_7f'
2021-04-21T09:58:34,235 Created temporary directory: /tmp/pip-unpack-swhh4aiv
2021-04-21T09:58:34,236 Building wheels for collected packages: ncbitaxonomy
2021-04-21T09:58:34,246   Created temporary directory: /tmp/pip-wheel-ec36gjc4
2021-04-21T09:58:34,247   Building wheel for ncbitaxonomy (setup.py): started
2021-04-21T09:58:34,248   Destination directory: /tmp/pip-wheel-ec36gjc4
2021-04-21T09:58:34,248   Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-eqwkrvj5/ncbitaxonomy_108fa46df5e040a5955a9b36f175c887/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-eqwkrvj5/ncbitaxonomy_108fa46df5e040a5955a9b36f175c887/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-ec36gjc4
2021-04-21T09:58:36,360   /usr/local/lib/python3.5/dist-packages/setuptools/dist.py:452: UserWarning: Normalizing '3.1.2-2' to '3.1.2.post2'
2021-04-21T09:58:36,361     warnings.warn(tmpl.format(**locals()))
2021-04-21T09:58:36,456   running bdist_wheel
2021-04-21T09:58:36,473   running build
2021-04-21T09:58:36,474   running build_py
2021-04-21T09:58:36,820   creating build
2021-04-21T09:58:36,821   creating build/lib
2021-04-21T09:58:36,824   creating build/lib/ncbitaxonomy
2021-04-21T09:58:36,827   copying ncbitaxonomy/__init__.py -> build/lib/ncbitaxonomy
2021-04-21T09:58:36,832   copying ncbitaxonomy/utils.py -> build/lib/ncbitaxonomy
2021-04-21T09:58:36,837   copying ncbitaxonomy/citation.py -> build/lib/ncbitaxonomy
2021-04-21T09:58:36,843   creating build/lib/ncbitaxonomy/ncbi_taxonomy
2021-04-21T09:58:36,846   copying ncbitaxonomy/ncbi_taxonomy/__init__.py -> build/lib/ncbitaxonomy/ncbi_taxonomy
2021-04-21T09:58:36,853   copying ncbitaxonomy/ncbi_taxonomy/ncbiquery.py -> build/lib/ncbitaxonomy/ncbi_taxonomy
2021-04-21T09:58:36,865   creating build/lib/ncbitaxonomy/parser
2021-04-21T09:58:36,867   copying ncbitaxonomy/parser/paml.py -> build/lib/ncbitaxonomy/parser
2021-04-21T09:58:36,873   copying ncbitaxonomy/parser/__init__.py -> build/lib/ncbitaxonomy/parser
2021-04-21T09:58:36,877   copying ncbitaxonomy/parser/fasta.py -> build/lib/ncbitaxonomy/parser
2021-04-21T09:58:36,883   copying ncbitaxonomy/parser/phylip.py -> build/lib/ncbitaxonomy/parser
2021-04-21T09:58:36,889   copying ncbitaxonomy/parser/newick.py -> build/lib/ncbitaxonomy/parser
2021-04-21T09:58:36,900   creating build/lib/ncbitaxonomy/coretype
2021-04-21T09:58:36,902   copying ncbitaxonomy/coretype/__init__.py -> build/lib/ncbitaxonomy/coretype
2021-04-21T09:58:36,908   copying ncbitaxonomy/coretype/tree.py -> build/lib/ncbitaxonomy/coretype
2021-04-21T09:58:36,922   copying ncbitaxonomy/coretype/seqgroup.py -> build/lib/ncbitaxonomy/coretype
2021-04-21T09:58:36,930   creating build/lib/ncbitaxonomy/phylo
2021-04-21T09:58:36,933   copying ncbitaxonomy/phylo/evolevents.py -> build/lib/ncbitaxonomy/phylo
2021-04-21T09:58:36,940   copying ncbitaxonomy/phylo/__init__.py -> build/lib/ncbitaxonomy/phylo
2021-04-21T09:58:36,946   copying ncbitaxonomy/phylo/reconciliation.py -> build/lib/ncbitaxonomy/phylo
2021-04-21T09:58:36,952   copying ncbitaxonomy/phylo/phylotree.py -> build/lib/ncbitaxonomy/phylo
2021-04-21T09:58:36,959   copying ncbitaxonomy/phylo/spoverlap.py -> build/lib/ncbitaxonomy/phylo
2021-04-21T09:58:36,965   running egg_info
2021-04-21T09:58:37,001   writing requirements to ncbitaxonomy.egg-info/requires.txt
2021-04-21T09:58:37,004   writing ncbitaxonomy.egg-info/PKG-INFO
2021-04-21T09:58:37,009   writing top-level names to ncbitaxonomy.egg-info/top_level.txt
2021-04-21T09:58:37,011   writing dependency_links to ncbitaxonomy.egg-info/dependency_links.txt
2021-04-21T09:58:37,027   reading manifest file 'ncbitaxonomy.egg-info/SOURCES.txt'
2021-04-21T09:58:37,032   reading manifest template 'MANIFEST.in'
2021-04-21T09:58:37,035   no previously-included directories found matching 'build'
2021-04-21T09:58:37,036   no previously-included directories found matching 'docs'
2021-04-21T09:58:37,043   writing manifest file 'ncbitaxonomy.egg-info/SOURCES.txt'
2021-04-21T09:58:37,060   installing to build/bdist.linux-armv7l/wheel
2021-04-21T09:58:37,061   running install
2021-04-21T09:58:37,062   running install_lib
2021-04-21T09:58:37,071   creating build/bdist.linux-armv7l
2021-04-21T09:58:37,072   creating build/bdist.linux-armv7l/wheel
2021-04-21T09:58:37,076   creating build/bdist.linux-armv7l/wheel/ncbitaxonomy
2021-04-21T09:58:37,079   creating build/bdist.linux-armv7l/wheel/ncbitaxonomy/ncbi_taxonomy
2021-04-21T09:58:37,082   copying build/lib/ncbitaxonomy/ncbi_taxonomy/__init__.py -> build/bdist.linux-armv7l/wheel/ncbitaxonomy/ncbi_taxonomy
2021-04-21T09:58:37,087   copying build/lib/ncbitaxonomy/ncbi_taxonomy/ncbiquery.py -> build/bdist.linux-armv7l/wheel/ncbitaxonomy/ncbi_taxonomy
2021-04-21T09:58:37,097   creating build/bdist.linux-armv7l/wheel/ncbitaxonomy/parser
2021-04-21T09:58:37,100   copying build/lib/ncbitaxonomy/parser/paml.py -> build/bdist.linux-armv7l/wheel/ncbitaxonomy/parser
2021-04-21T09:58:37,107   copying build/lib/ncbitaxonomy/parser/__init__.py -> build/bdist.linux-armv7l/wheel/ncbitaxonomy/parser
2021-04-21T09:58:37,113   copying build/lib/ncbitaxonomy/parser/fasta.py -> build/bdist.linux-armv7l/wheel/ncbitaxonomy/parser
2021-04-21T09:58:37,119   copying build/lib/ncbitaxonomy/parser/phylip.py -> build/bdist.linux-armv7l/wheel/ncbitaxonomy/parser
2021-04-21T09:58:37,124   copying build/lib/ncbitaxonomy/parser/newick.py -> build/bdist.linux-armv7l/wheel/ncbitaxonomy/parser
2021-04-21T09:58:37,131   copying build/lib/ncbitaxonomy/__init__.py -> build/bdist.linux-armv7l/wheel/ncbitaxonomy
2021-04-21T09:58:37,138   creating build/bdist.linux-armv7l/wheel/ncbitaxonomy/coretype
2021-04-21T09:58:37,141   copying build/lib/ncbitaxonomy/coretype/__init__.py -> build/bdist.linux-armv7l/wheel/ncbitaxonomy/coretype
2021-04-21T09:58:37,147   copying build/lib/ncbitaxonomy/coretype/tree.py -> build/bdist.linux-armv7l/wheel/ncbitaxonomy/coretype
2021-04-21T09:58:37,162   copying build/lib/ncbitaxonomy/coretype/seqgroup.py -> build/bdist.linux-armv7l/wheel/ncbitaxonomy/coretype
2021-04-21T09:58:37,168   creating build/bdist.linux-armv7l/wheel/ncbitaxonomy/phylo
2021-04-21T09:58:37,170   copying build/lib/ncbitaxonomy/phylo/evolevents.py -> build/bdist.linux-armv7l/wheel/ncbitaxonomy/phylo
2021-04-21T09:58:37,176   copying build/lib/ncbitaxonomy/phylo/__init__.py -> build/bdist.linux-armv7l/wheel/ncbitaxonomy/phylo
2021-04-21T09:58:37,182   copying build/lib/ncbitaxonomy/phylo/reconciliation.py -> build/bdist.linux-armv7l/wheel/ncbitaxonomy/phylo
2021-04-21T09:58:37,189   copying build/lib/ncbitaxonomy/phylo/phylotree.py -> build/bdist.linux-armv7l/wheel/ncbitaxonomy/phylo
2021-04-21T09:58:37,198   copying build/lib/ncbitaxonomy/phylo/spoverlap.py -> build/bdist.linux-armv7l/wheel/ncbitaxonomy/phylo
2021-04-21T09:58:37,205   copying build/lib/ncbitaxonomy/utils.py -> build/bdist.linux-armv7l/wheel/ncbitaxonomy
2021-04-21T09:58:37,212   copying build/lib/ncbitaxonomy/citation.py -> build/bdist.linux-armv7l/wheel/ncbitaxonomy
2021-04-21T09:58:37,217   running install_egg_info
2021-04-21T09:58:37,235   Copying ncbitaxonomy.egg-info to build/bdist.linux-armv7l/wheel/ncbitaxonomy-3.1.2.post2-py3.5.egg-info
2021-04-21T09:58:37,267   running install_scripts
2021-04-21T09:58:37,461   creating build/bdist.linux-armv7l/wheel/ncbitaxonomy-3.1.2.post2.dist-info/WHEEL
2021-04-21T09:58:37,799   Building wheel for ncbitaxonomy (setup.py): finished with status 'done'
2021-04-21T09:58:37,805   Created wheel for ncbitaxonomy: filename=ncbitaxonomy-3.1.2.post2-py3-none-any.whl size=77615 sha256=97f6d6fe2dfbee651c5b913157bce075d572cfc2f8f06aa5620f80ed79a5973d
2021-04-21T09:58:37,806   Stored in directory: /tmp/pip-ephem-wheel-cache-_dwvgntt/wheels/8d/39/e4/e761d3f6f97b1c88a06d887216695576e2cbf0a17ad65547fb
2021-04-21T09:58:37,824 Successfully built ncbitaxonomy
2021-04-21T09:58:37,843 Removed build tracker: '/tmp/pip-req-tracker-2vk8z_7f'