2021-05-04T17:36:44,316 DEPRECATION: Python 3.5 reached the end of its life on September 13th, 2020. Please upgrade your Python as Python 3.5 is no longer maintained. pip 21.0 will drop support for Python 3.5 in January 2021. pip 21.0 will remove support for this functionality.
2021-05-04T17:36:45,040 Created temporary directory: /tmp/pip-ephem-wheel-cache-8vn_vscq
2021-05-04T17:36:45,045 Created temporary directory: /tmp/pip-req-tracker-nd26l89e
2021-05-04T17:36:45,046 Initialized build tracking at /tmp/pip-req-tracker-nd26l89e
2021-05-04T17:36:45,046 Created build tracker: /tmp/pip-req-tracker-nd26l89e
2021-05-04T17:36:45,047 Entered build tracker: /tmp/pip-req-tracker-nd26l89e
2021-05-04T17:36:45,048 Created temporary directory: /tmp/pip-wheel-moe6a1vb
2021-05-04T17:36:45,128 1 location(s) to search for versions of ncbitaxonomy:
2021-05-04T17:36:45,128 * https://pypi.org/simple/ncbitaxonomy/
2021-05-04T17:36:45,129 Fetching project page and analyzing links: https://pypi.org/simple/ncbitaxonomy/
2021-05-04T17:36:45,131 Getting page https://pypi.org/simple/ncbitaxonomy/
2021-05-04T17:36:45,136 Found index url https://pypi.org/simple
2021-05-04T17:36:45,520   Found link https://files.pythonhosted.org/packages/bc/08/65c3f5bf4eea253b80cad47b6c72d8718fd67ea4ce93d4aeeab47bd359dd/ncbitaxonomy-3.1.2.tar.gz#sha256=b6e76ae47e6b37a7ad2ea88c6d13213a653a42b2792c9d409a886c211fa4417f (from https://pypi.org/simple/ncbitaxonomy/), version: 3.1.2
2021-05-04T17:36:45,522   Found link https://files.pythonhosted.org/packages/2a/ea/697a8bf4b02ea32204cbf7291ab96759f637a1d012c4dc9bac2010f1d33a/ncbitaxonomy-3.1.2.post1.tar.gz#sha256=7039711b699a2b79970b1a0b61baa061aad8c57b37666d5bdda4972fc945ac5c (from https://pypi.org/simple/ncbitaxonomy/) (requires-python:>=3.5.2), version: 3.1.2.post1
2021-05-04T17:36:45,523   Found link https://files.pythonhosted.org/packages/de/f4/e012c3805435f40eb5b516b7253a9830e2ac9b8df8042acb4f5525986062/ncbitaxonomy-3.1.2.post2.tar.gz#sha256=de61ebb296014200a4968f39b2f315f1a3e766a97cc5c6681d4a6814deb271e9 (from https://pypi.org/simple/ncbitaxonomy/) (requires-python:>=3.5.2), version: 3.1.2.post2
2021-05-04T17:36:45,525   Found link https://files.pythonhosted.org/packages/cc/2c/af7fa06c3dd2a9a3a7a99eb6c1822242c02bb09eb69bea6af7d925678d9b/ncbitaxonomy-3.1.2.post3.tar.gz#sha256=168f61394c7b2715f914e0a59ae4e8812341b42137b044539510e799395fb978 (from https://pypi.org/simple/ncbitaxonomy/) (requires-python:>=3.5.2), version: 3.1.2.post3
2021-05-04T17:36:45,554 Given no hashes to check 1 links for project 'ncbitaxonomy': discarding no candidates
2021-05-04T17:36:45,585 Collecting ncbitaxonomy==3.1.2.post3
2021-05-04T17:36:45,589   Created temporary directory: /tmp/pip-unpack-lzkfew34
2021-05-04T17:36:45,841   Downloading ncbitaxonomy-3.1.2.post3.tar.gz (71 kB)
2021-05-04T17:36:46,131   Added ncbitaxonomy==3.1.2.post3 from https://files.pythonhosted.org/packages/cc/2c/af7fa06c3dd2a9a3a7a99eb6c1822242c02bb09eb69bea6af7d925678d9b/ncbitaxonomy-3.1.2.post3.tar.gz#sha256=168f61394c7b2715f914e0a59ae4e8812341b42137b044539510e799395fb978 to build tracker '/tmp/pip-req-tracker-nd26l89e'
2021-05-04T17:36:46,133     Running setup.py (path:/tmp/pip-wheel-moe6a1vb/ncbitaxonomy_a8798f695f5a431abfcf4c42995ce653/setup.py) egg_info for package ncbitaxonomy
2021-05-04T17:36:46,135     Created temporary directory: /tmp/pip-pip-egg-info-dyu47oav
2021-05-04T17:36:46,136     Running command python setup.py egg_info
2021-05-04T17:36:48,421     running egg_info
2021-05-04T17:36:48,426     creating /tmp/pip-pip-egg-info-dyu47oav/ncbitaxonomy.egg-info
2021-05-04T17:36:48,428     writing /tmp/pip-pip-egg-info-dyu47oav/ncbitaxonomy.egg-info/PKG-INFO
2021-05-04T17:36:48,436     writing dependency_links to /tmp/pip-pip-egg-info-dyu47oav/ncbitaxonomy.egg-info/dependency_links.txt
2021-05-04T17:36:48,439     writing requirements to /tmp/pip-pip-egg-info-dyu47oav/ncbitaxonomy.egg-info/requires.txt
2021-05-04T17:36:48,443     writing top-level names to /tmp/pip-pip-egg-info-dyu47oav/ncbitaxonomy.egg-info/top_level.txt
2021-05-04T17:36:48,448     writing manifest file '/tmp/pip-pip-egg-info-dyu47oav/ncbitaxonomy.egg-info/SOURCES.txt'
2021-05-04T17:36:48,838     reading manifest file '/tmp/pip-pip-egg-info-dyu47oav/ncbitaxonomy.egg-info/SOURCES.txt'
2021-05-04T17:36:48,841     reading manifest template 'MANIFEST.in'
2021-05-04T17:36:48,845     /usr/local/lib/python3.5/dist-packages/setuptools/dist.py:452: UserWarning: Normalizing '3.1.2-3' to '3.1.2.post3'
2021-05-04T17:36:48,846       warnings.warn(tmpl.format(**locals()))
2021-05-04T17:36:48,846     no previously-included directories found matching 'build'
2021-05-04T17:36:48,847     no previously-included directories found matching 'docs'
2021-05-04T17:36:48,852     writing manifest file '/tmp/pip-pip-egg-info-dyu47oav/ncbitaxonomy.egg-info/SOURCES.txt'
2021-05-04T17:36:48,989   Source in /tmp/pip-wheel-moe6a1vb/ncbitaxonomy_a8798f695f5a431abfcf4c42995ce653 has version 3.1.2.post3, which satisfies requirement ncbitaxonomy==3.1.2.post3 from https://files.pythonhosted.org/packages/cc/2c/af7fa06c3dd2a9a3a7a99eb6c1822242c02bb09eb69bea6af7d925678d9b/ncbitaxonomy-3.1.2.post3.tar.gz#sha256=168f61394c7b2715f914e0a59ae4e8812341b42137b044539510e799395fb978
2021-05-04T17:36:48,992   Removed ncbitaxonomy==3.1.2.post3 from https://files.pythonhosted.org/packages/cc/2c/af7fa06c3dd2a9a3a7a99eb6c1822242c02bb09eb69bea6af7d925678d9b/ncbitaxonomy-3.1.2.post3.tar.gz#sha256=168f61394c7b2715f914e0a59ae4e8812341b42137b044539510e799395fb978 from build tracker '/tmp/pip-req-tracker-nd26l89e'
2021-05-04T17:36:49,005 Created temporary directory: /tmp/pip-unpack-b5fcbycy
2021-05-04T17:36:49,006 Building wheels for collected packages: ncbitaxonomy
2021-05-04T17:36:49,015   Created temporary directory: /tmp/pip-wheel-28szf0io
2021-05-04T17:36:49,016   Building wheel for ncbitaxonomy (setup.py): started
2021-05-04T17:36:49,017   Destination directory: /tmp/pip-wheel-28szf0io
2021-05-04T17:36:49,017   Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-moe6a1vb/ncbitaxonomy_a8798f695f5a431abfcf4c42995ce653/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-moe6a1vb/ncbitaxonomy_a8798f695f5a431abfcf4c42995ce653/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-28szf0io
2021-05-04T17:36:51,327   /usr/local/lib/python3.5/dist-packages/setuptools/dist.py:452: UserWarning: Normalizing '3.1.2-3' to '3.1.2.post3'
2021-05-04T17:36:51,328     warnings.warn(tmpl.format(**locals()))
2021-05-04T17:36:51,427   running bdist_wheel
2021-05-04T17:36:51,444   running build
2021-05-04T17:36:51,444   running build_py
2021-05-04T17:36:51,783   creating build
2021-05-04T17:36:51,783   creating build/lib
2021-05-04T17:36:51,786   creating build/lib/ncbitaxonomy
2021-05-04T17:36:51,791   copying ncbitaxonomy/__init__.py -> build/lib/ncbitaxonomy
2021-05-04T17:36:51,796   copying ncbitaxonomy/citation.py -> build/lib/ncbitaxonomy
2021-05-04T17:36:51,802   copying ncbitaxonomy/utils.py -> build/lib/ncbitaxonomy
2021-05-04T17:36:51,814   creating build/lib/ncbitaxonomy/phylo
2021-05-04T17:36:51,818   copying ncbitaxonomy/phylo/__init__.py -> build/lib/ncbitaxonomy/phylo
2021-05-04T17:36:51,825   copying ncbitaxonomy/phylo/reconciliation.py -> build/lib/ncbitaxonomy/phylo
2021-05-04T17:36:51,833   copying ncbitaxonomy/phylo/phylotree.py -> build/lib/ncbitaxonomy/phylo
2021-05-04T17:36:51,844   copying ncbitaxonomy/phylo/evolevents.py -> build/lib/ncbitaxonomy/phylo
2021-05-04T17:36:51,850   copying ncbitaxonomy/phylo/spoverlap.py -> build/lib/ncbitaxonomy/phylo
2021-05-04T17:36:51,860   creating build/lib/ncbitaxonomy/parser
2021-05-04T17:36:51,863   copying ncbitaxonomy/parser/phylip.py -> build/lib/ncbitaxonomy/parser
2021-05-04T17:36:51,871   copying ncbitaxonomy/parser/newick.py -> build/lib/ncbitaxonomy/parser
2021-05-04T17:36:51,880   copying ncbitaxonomy/parser/paml.py -> build/lib/ncbitaxonomy/parser
2021-05-04T17:36:51,886   copying ncbitaxonomy/parser/__init__.py -> build/lib/ncbitaxonomy/parser
2021-05-04T17:36:51,893   copying ncbitaxonomy/parser/fasta.py -> build/lib/ncbitaxonomy/parser
2021-05-04T17:36:51,904   creating build/lib/ncbitaxonomy/coretype
2021-05-04T17:36:51,907   copying ncbitaxonomy/coretype/__init__.py -> build/lib/ncbitaxonomy/coretype
2021-05-04T17:36:51,915   copying ncbitaxonomy/coretype/seqgroup.py -> build/lib/ncbitaxonomy/coretype
2021-05-04T17:36:51,923   copying ncbitaxonomy/coretype/tree.py -> build/lib/ncbitaxonomy/coretype
2021-05-04T17:36:51,943   creating build/lib/ncbitaxonomy/ncbi_taxonomy
2021-05-04T17:36:51,946   copying ncbitaxonomy/ncbi_taxonomy/ncbiquery.py -> build/lib/ncbitaxonomy/ncbi_taxonomy
2021-05-04T17:36:51,957   copying ncbitaxonomy/ncbi_taxonomy/__init__.py -> build/lib/ncbitaxonomy/ncbi_taxonomy
2021-05-04T17:36:51,965   copying ncbitaxonomy/ncbi_taxonomy/ncbiquery2.py -> build/lib/ncbitaxonomy/ncbi_taxonomy
2021-05-04T17:36:51,971   running egg_info
2021-05-04T17:36:52,007   writing ncbitaxonomy.egg-info/PKG-INFO
2021-05-04T17:36:52,012   writing dependency_links to ncbitaxonomy.egg-info/dependency_links.txt
2021-05-04T17:36:52,016   writing requirements to ncbitaxonomy.egg-info/requires.txt
2021-05-04T17:36:52,019   writing top-level names to ncbitaxonomy.egg-info/top_level.txt
2021-05-04T17:36:52,045   reading manifest file 'ncbitaxonomy.egg-info/SOURCES.txt'
2021-05-04T17:36:52,053   reading manifest template 'MANIFEST.in'
2021-05-04T17:36:52,056   no previously-included directories found matching 'build'
2021-05-04T17:36:52,057   no previously-included directories found matching 'docs'
2021-05-04T17:36:52,064   writing manifest file 'ncbitaxonomy.egg-info/SOURCES.txt'
2021-05-04T17:36:52,082   installing to build/bdist.linux-armv7l/wheel
2021-05-04T17:36:52,083   running install
2021-05-04T17:36:52,085   running install_lib
2021-05-04T17:36:52,094   creating build/bdist.linux-armv7l
2021-05-04T17:36:52,095   creating build/bdist.linux-armv7l/wheel
2021-05-04T17:36:52,102   creating build/bdist.linux-armv7l/wheel/ncbitaxonomy
2021-05-04T17:36:52,105   creating build/bdist.linux-armv7l/wheel/ncbitaxonomy/phylo
2021-05-04T17:36:52,107   copying build/lib/ncbitaxonomy/phylo/__init__.py -> build/bdist.linux-armv7l/wheel/ncbitaxonomy/phylo
2021-05-04T17:36:52,115   copying build/lib/ncbitaxonomy/phylo/reconciliation.py -> build/bdist.linux-armv7l/wheel/ncbitaxonomy/phylo
2021-05-04T17:36:52,123   copying build/lib/ncbitaxonomy/phylo/phylotree.py -> build/bdist.linux-armv7l/wheel/ncbitaxonomy/phylo
2021-05-04T17:36:52,133   copying build/lib/ncbitaxonomy/phylo/evolevents.py -> build/bdist.linux-armv7l/wheel/ncbitaxonomy/phylo
2021-05-04T17:36:53,248   copying build/lib/ncbitaxonomy/phylo/spoverlap.py -> build/bdist.linux-armv7l/wheel/ncbitaxonomy/phylo
2021-05-04T17:36:53,257   copying build/lib/ncbitaxonomy/__init__.py -> build/bdist.linux-armv7l/wheel/ncbitaxonomy
2021-05-04T17:36:53,265   copying build/lib/ncbitaxonomy/citation.py -> build/bdist.linux-armv7l/wheel/ncbitaxonomy
2021-05-04T17:36:53,274   creating build/bdist.linux-armv7l/wheel/ncbitaxonomy/parser
2021-05-04T17:36:53,277   copying build/lib/ncbitaxonomy/parser/phylip.py -> build/bdist.linux-armv7l/wheel/ncbitaxonomy/parser
2021-05-04T17:36:53,285   copying build/lib/ncbitaxonomy/parser/newick.py -> build/bdist.linux-armv7l/wheel/ncbitaxonomy/parser
2021-05-04T17:36:53,296   copying build/lib/ncbitaxonomy/parser/paml.py -> build/bdist.linux-armv7l/wheel/ncbitaxonomy/parser
2021-05-04T17:36:53,303   copying build/lib/ncbitaxonomy/parser/__init__.py -> build/bdist.linux-armv7l/wheel/ncbitaxonomy/parser
2021-05-04T17:36:53,310   copying build/lib/ncbitaxonomy/parser/fasta.py -> build/bdist.linux-armv7l/wheel/ncbitaxonomy/parser
2021-05-04T17:36:53,319   copying build/lib/ncbitaxonomy/utils.py -> build/bdist.linux-armv7l/wheel/ncbitaxonomy
2021-05-04T17:36:53,331   creating build/bdist.linux-armv7l/wheel/ncbitaxonomy/coretype
2021-05-04T17:36:53,463   copying build/lib/ncbitaxonomy/coretype/__init__.py -> build/bdist.linux-armv7l/wheel/ncbitaxonomy/coretype
2021-05-04T17:36:53,473   copying build/lib/ncbitaxonomy/coretype/seqgroup.py -> build/bdist.linux-armv7l/wheel/ncbitaxonomy/coretype
2021-05-04T17:36:53,482   copying build/lib/ncbitaxonomy/coretype/tree.py -> build/bdist.linux-armv7l/wheel/ncbitaxonomy/coretype
2021-05-04T17:36:53,500   creating build/bdist.linux-armv7l/wheel/ncbitaxonomy/ncbi_taxonomy
2021-05-04T17:36:53,503   copying build/lib/ncbitaxonomy/ncbi_taxonomy/ncbiquery.py -> build/bdist.linux-armv7l/wheel/ncbitaxonomy/ncbi_taxonomy
2021-05-04T17:36:53,516   copying build/lib/ncbitaxonomy/ncbi_taxonomy/__init__.py -> build/bdist.linux-armv7l/wheel/ncbitaxonomy/ncbi_taxonomy
2021-05-04T17:36:53,524   copying build/lib/ncbitaxonomy/ncbi_taxonomy/ncbiquery2.py -> build/bdist.linux-armv7l/wheel/ncbitaxonomy/ncbi_taxonomy
2021-05-04T17:36:53,530   running install_egg_info
2021-05-04T17:36:53,554   Copying ncbitaxonomy.egg-info to build/bdist.linux-armv7l/wheel/ncbitaxonomy-3.1.2.post3-py3.5.egg-info
2021-05-04T17:36:53,591   running install_scripts
2021-05-04T17:36:53,948   creating build/bdist.linux-armv7l/wheel/ncbitaxonomy-3.1.2.post3.dist-info/WHEEL
2021-05-04T17:36:54,305   Building wheel for ncbitaxonomy (setup.py): finished with status 'done'
2021-05-04T17:36:54,312   Created wheel for ncbitaxonomy: filename=ncbitaxonomy-3.1.2.post3-py3-none-any.whl size=78387 sha256=b3c2a5fa6898c42917b8ef820b1f24957b00ead33da4a6babd6de47ac1e33f17
2021-05-04T17:36:54,313   Stored in directory: /tmp/pip-ephem-wheel-cache-8vn_vscq/wheels/61/7a/58/473ec2f3c9ab1cd1efa4340e6cb572f4951e666fcf15c3813b
2021-05-04T17:36:54,333 Successfully built ncbitaxonomy
2021-05-04T17:36:54,353 Removed build tracker: '/tmp/pip-req-tracker-nd26l89e'