2021-05-05T07:26:48,920 DEPRECATION: Python 3.5 reached the end of its life on September 13th, 2020. Please upgrade your Python as Python 3.5 is no longer maintained. pip 21.0 will drop support for Python 3.5 in January 2021. pip 21.0 will remove support for this functionality. 2021-05-05T07:26:49,611 Created temporary directory: /tmp/pip-ephem-wheel-cache-k6d79_oa 2021-05-05T07:26:49,616 Created temporary directory: /tmp/pip-req-tracker-wc_4s65_ 2021-05-05T07:26:49,617 Initialized build tracking at /tmp/pip-req-tracker-wc_4s65_ 2021-05-05T07:26:49,617 Created build tracker: /tmp/pip-req-tracker-wc_4s65_ 2021-05-05T07:26:49,617 Entered build tracker: /tmp/pip-req-tracker-wc_4s65_ 2021-05-05T07:26:49,619 Created temporary directory: /tmp/pip-wheel-aecqt8h7 2021-05-05T07:26:49,692 1 location(s) to search for versions of methplotlib: 2021-05-05T07:26:49,692 * https://pypi.org/simple/methplotlib/ 2021-05-05T07:26:49,693 Fetching project page and analyzing links: https://pypi.org/simple/methplotlib/ 2021-05-05T07:26:49,695 Getting page https://pypi.org/simple/methplotlib/ 2021-05-05T07:26:49,699 Found index url https://pypi.org/simple 2021-05-05T07:26:50,038 Found link https://files.pythonhosted.org/packages/28/2c/2b4f528c598c1b5a9bc606b13c9d986ff8046f4414c6922b951402e3fca9/methplotlib-0.1.0.tar.gz#sha256=623bfb118badbd9308eeb55f60e626edcc9d8951a55be0b6b26f03974103d77e (from https://pypi.org/simple/methplotlib/) (requires-python:>=3), version: 0.1.0 2021-05-05T07:26:50,040 Found link https://files.pythonhosted.org/packages/bc/03/41c2dc6453a328dc4a9430f3fe578e278c49db88e55ac29c8e900c9c2097/methplotlib-0.1.1.tar.gz#sha256=cd55d3e6328a4b1b829bc182ffea481db9b9dec910a619bd775341347b653784 (from https://pypi.org/simple/methplotlib/) (requires-python:>=3), version: 0.1.1 2021-05-05T07:26:50,042 Found link https://files.pythonhosted.org/packages/cc/36/593b074857cfcffb215f4898fc616bda20fd6ad82ff84d0c1966c40c1a07/methplotlib-0.2.0.tar.gz#sha256=d649237ded6679cf972719496e44e65b33981eccb5095d44a8cd773fd0637c8c (from https://pypi.org/simple/methplotlib/) (requires-python:>=3), version: 0.2.0 2021-05-05T07:26:50,044 Found link https://files.pythonhosted.org/packages/92/c3/c6a8950fad57b751d9abf5ec9bbe42f9b5e75982debe66caf237113dfb58/methplotlib-0.4.0.tar.gz#sha256=5b90149c3641f76cbd0d8fb377a8113864147794f3438dfb131d431ab3e7a778 (from https://pypi.org/simple/methplotlib/) (requires-python:>=3), version: 0.4.0 2021-05-05T07:26:50,046 Found link https://files.pythonhosted.org/packages/b9/a5/3c4a501d7d557002330b177b34db1eacf03aa514acef8aa92a0ab4572c54/methplotlib-0.6.0.tar.gz#sha256=1cce83da596cb679a71710def7701ee7ba2c427586613a2803c1888931f93812 (from https://pypi.org/simple/methplotlib/) (requires-python:>=3), version: 0.6.0 2021-05-05T07:26:50,047 Found link https://files.pythonhosted.org/packages/45/62/bc626e5609b3ee828cfc677c1de7c71aba5f77e60b60dd7661fb3ffd92cc/methplotlib-0.7.0.tar.gz#sha256=7134129596887cc98afbd90f4f6236584c37c3a5c289165682f2c0238dfab9bd (from https://pypi.org/simple/methplotlib/) (requires-python:>=3), version: 0.7.0 2021-05-05T07:26:50,049 Found link https://files.pythonhosted.org/packages/02/9e/7874b02fe341a54fca7653714185bbd2fbcb21853baba0180da0e474bcff/methplotlib-0.8.0.tar.gz#sha256=f104df8260c9d65b4a2809f3f94ee523eca0810bd85342029929c1dbfefb8f77 (from https://pypi.org/simple/methplotlib/) (requires-python:>=3), version: 0.8.0 2021-05-05T07:26:50,051 Found link https://files.pythonhosted.org/packages/63/8d/fd7a43b4bdb8a691416a4178343f8c71eb2e71f0af2a851069e91d795c75/methplotlib-0.12.0.tar.gz#sha256=3db64bee8316c3c9026f27c5b961e99450bafdfa980c385e5b652eb52cc953a6 (from https://pypi.org/simple/methplotlib/) (requires-python:>=3), version: 0.12.0 2021-05-05T07:26:50,053 Found link https://files.pythonhosted.org/packages/ce/ca/d785f1a0af7d5f69a632c393c328d8d87d9ba31e1a71a8e7522f9a8173b4/methplotlib-0.13.0.tar.gz#sha256=8f14fdf68ad6427838000bc335d548755e321de993eb0fadc6d66fc674886d40 (from https://pypi.org/simple/methplotlib/) (requires-python:>=3), version: 0.13.0 2021-05-05T07:26:50,054 Found link https://files.pythonhosted.org/packages/9f/99/ba102fb95bd88ea788e43c5e32338d7ac6d088d015ae8b0837b99ee751be/methplotlib-0.13.1.tar.gz#sha256=0b26643108e58983d0abdedacc374b2dceb6b851cde3b4267143ca27bb8403f3 (from https://pypi.org/simple/methplotlib/) (requires-python:>=3), version: 0.13.1 2021-05-05T07:26:50,056 Found link https://files.pythonhosted.org/packages/2a/41/1695217093dfb0966b0f2ee214b00b690863eb90fb1467b4e19bf0da0f80/methplotlib-0.14.0.tar.gz#sha256=298105a84be08823410231646df15d05da3b6f154b60c9986c0eb8683196b00a (from https://pypi.org/simple/methplotlib/) (requires-python:>=3), version: 0.14.0 2021-05-05T07:26:50,058 Found link https://files.pythonhosted.org/packages/dc/a6/b379dd3a3596dbd5017f3e4278efade8fc2f1e60cb1cc01d91062ff6f9dd/methplotlib-0.14.1.tar.gz#sha256=af49418b0ba1cb7ec48e32b2fef82fd05dfe9a0e8366db7a05634e1c23ad72df (from https://pypi.org/simple/methplotlib/) (requires-python:>=3), version: 0.14.1 2021-05-05T07:26:50,059 Found link https://files.pythonhosted.org/packages/c7/a1/154c3b7e600726f090e85a58ccbdc90f5036f4f0f04121e5f1b913a31950/methplotlib-0.17.0.tar.gz#sha256=efe5e5a792ae341283ed92d518b60f89e58d6076933a6513c2f18d571079a4bb (from https://pypi.org/simple/methplotlib/) (requires-python:>=3), version: 0.17.0 2021-05-05T07:26:50,061 Found link https://files.pythonhosted.org/packages/11/8b/cca07f32ff2ffa4bdb25805997c577035f6f151896d01c8f912feee8db18/methplotlib-0.18.1.tar.gz#sha256=5227a49e87026e87f2a06ad5c2fc22e27525cb8e440f3521c13b01e37d14fbb1 (from https://pypi.org/simple/methplotlib/) (requires-python:>=3), version: 0.18.1 2021-05-05T07:26:50,094 Given no hashes to check 1 links for project 'methplotlib': discarding no candidates 2021-05-05T07:26:50,126 Collecting methplotlib==0.18.1 2021-05-05T07:26:50,130 Created temporary directory: /tmp/pip-unpack-6p0ndqgw 2021-05-05T07:26:50,348 Downloading methplotlib-0.18.1.tar.gz (22 kB) 2021-05-05T07:26:50,546 Added methplotlib==0.18.1 from https://files.pythonhosted.org/packages/11/8b/cca07f32ff2ffa4bdb25805997c577035f6f151896d01c8f912feee8db18/methplotlib-0.18.1.tar.gz#sha256=5227a49e87026e87f2a06ad5c2fc22e27525cb8e440f3521c13b01e37d14fbb1 to build tracker '/tmp/pip-req-tracker-wc_4s65_' 2021-05-05T07:26:50,550 Running setup.py (path:/tmp/pip-wheel-aecqt8h7/methplotlib_9c3528ee5a1d4be7a5a81af647ed55a1/setup.py) egg_info for package methplotlib 2021-05-05T07:26:50,552 Created temporary directory: /tmp/pip-pip-egg-info-awuo5t0q 2021-05-05T07:26:50,553 Running command python setup.py egg_info 2021-05-05T07:26:52,765 running egg_info 2021-05-05T07:26:52,771 creating /tmp/pip-pip-egg-info-awuo5t0q/methplotlib.egg-info 2021-05-05T07:26:52,774 writing /tmp/pip-pip-egg-info-awuo5t0q/methplotlib.egg-info/PKG-INFO 2021-05-05T07:26:52,780 writing dependency_links to /tmp/pip-pip-egg-info-awuo5t0q/methplotlib.egg-info/dependency_links.txt 2021-05-05T07:26:52,782 writing entry points to /tmp/pip-pip-egg-info-awuo5t0q/methplotlib.egg-info/entry_points.txt 2021-05-05T07:26:52,784 writing top-level names to /tmp/pip-pip-egg-info-awuo5t0q/methplotlib.egg-info/top_level.txt 2021-05-05T07:26:52,787 writing requirements to /tmp/pip-pip-egg-info-awuo5t0q/methplotlib.egg-info/requires.txt 2021-05-05T07:26:52,792 writing manifest file '/tmp/pip-pip-egg-info-awuo5t0q/methplotlib.egg-info/SOURCES.txt' 2021-05-05T07:26:53,158 reading manifest file '/tmp/pip-pip-egg-info-awuo5t0q/methplotlib.egg-info/SOURCES.txt' 2021-05-05T07:26:53,162 reading manifest template 'MANIFEST.in' 2021-05-05T07:26:53,169 writing manifest file '/tmp/pip-pip-egg-info-awuo5t0q/methplotlib.egg-info/SOURCES.txt' 2021-05-05T07:26:53,304 Source in /tmp/pip-wheel-aecqt8h7/methplotlib_9c3528ee5a1d4be7a5a81af647ed55a1 has version 0.18.1, which satisfies requirement methplotlib==0.18.1 from https://files.pythonhosted.org/packages/11/8b/cca07f32ff2ffa4bdb25805997c577035f6f151896d01c8f912feee8db18/methplotlib-0.18.1.tar.gz#sha256=5227a49e87026e87f2a06ad5c2fc22e27525cb8e440f3521c13b01e37d14fbb1 2021-05-05T07:26:53,306 Removed methplotlib==0.18.1 from https://files.pythonhosted.org/packages/11/8b/cca07f32ff2ffa4bdb25805997c577035f6f151896d01c8f912feee8db18/methplotlib-0.18.1.tar.gz#sha256=5227a49e87026e87f2a06ad5c2fc22e27525cb8e440f3521c13b01e37d14fbb1 from build tracker '/tmp/pip-req-tracker-wc_4s65_' 2021-05-05T07:26:53,319 Created temporary directory: /tmp/pip-unpack-18d8a9w3 2021-05-05T07:26:53,320 Building wheels for collected packages: methplotlib 2021-05-05T07:26:53,328 Created temporary directory: /tmp/pip-wheel-b50rgmqy 2021-05-05T07:26:53,329 Building wheel for methplotlib (setup.py): started 2021-05-05T07:26:53,330 Destination directory: /tmp/pip-wheel-b50rgmqy 2021-05-05T07:26:53,331 Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-aecqt8h7/methplotlib_9c3528ee5a1d4be7a5a81af647ed55a1/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-aecqt8h7/methplotlib_9c3528ee5a1d4be7a5a81af647ed55a1/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-b50rgmqy 2021-05-05T07:26:55,551 running bdist_wheel 2021-05-05T07:26:55,565 running build 2021-05-05T07:26:55,566 running build_py 2021-05-05T07:26:55,903 creating build 2021-05-05T07:26:55,904 creating build/lib 2021-05-05T07:26:55,906 creating build/lib/scripts 2021-05-05T07:26:55,909 copying scripts/annotate_calls_by_phase.py -> build/lib/scripts 2021-05-05T07:26:55,914 copying scripts/genome-wide-QC.py -> build/lib/scripts 2021-05-05T07:26:55,918 copying scripts/split_calls_by_phase.py -> build/lib/scripts 2021-05-05T07:26:55,922 copying scripts/__init__.py -> build/lib/scripts 2021-05-05T07:26:55,926 copying scripts/sorting_and_multiple_testing_correction.py -> build/lib/scripts 2021-05-05T07:26:55,930 copying scripts/split_calls_by_longshot_phase.py -> build/lib/scripts 2021-05-05T07:26:55,936 copying scripts/calculate_methylation_frequency.py -> build/lib/scripts 2021-05-05T07:26:55,945 creating build/lib/methplotlib 2021-05-05T07:26:55,948 copying methplotlib/annotation.py -> build/lib/methplotlib 2021-05-05T07:26:55,955 copying methplotlib/version.py -> build/lib/methplotlib 2021-05-05T07:26:55,959 copying methplotlib/__init__.py -> build/lib/methplotlib 2021-05-05T07:26:55,964 copying methplotlib/helpers.py -> build/lib/methplotlib 2021-05-05T07:26:55,970 copying methplotlib/import_methylation.py -> build/lib/methplotlib 2021-05-05T07:26:55,976 copying methplotlib/utils.py -> build/lib/methplotlib 2021-05-05T07:26:55,982 copying methplotlib/plots.py -> build/lib/methplotlib 2021-05-05T07:26:55,988 copying methplotlib/methplotlib.py -> build/lib/methplotlib 2021-05-05T07:26:55,993 copying methplotlib/qc.py -> build/lib/methplotlib 2021-05-05T07:26:56,001 creating build/lib/methplotlib/differential 2021-05-05T07:26:56,004 copying methplotlib/differential/__init__.py -> build/lib/methplotlib/differential 2021-05-05T07:26:56,009 copying methplotlib/differential/differential.py -> build/lib/methplotlib/differential 2021-05-05T07:26:56,013 running egg_info 2021-05-05T07:26:56,042 writing entry points to methplotlib.egg-info/entry_points.txt 2021-05-05T07:26:56,044 writing dependency_links to methplotlib.egg-info/dependency_links.txt 2021-05-05T07:26:56,047 writing requirements to methplotlib.egg-info/requires.txt 2021-05-05T07:26:56,050 writing top-level names to methplotlib.egg-info/top_level.txt 2021-05-05T07:26:56,052 writing methplotlib.egg-info/PKG-INFO 2021-05-05T07:26:56,069 reading manifest file 'methplotlib.egg-info/SOURCES.txt' 2021-05-05T07:26:56,073 reading manifest template 'MANIFEST.in' 2021-05-05T07:26:56,082 writing manifest file 'methplotlib.egg-info/SOURCES.txt' 2021-05-05T07:26:56,087 copying scripts/allele_specific_modification -> build/lib/scripts 2021-05-05T07:26:56,092 copying scripts/differential_modification -> build/lib/scripts 2021-05-05T07:26:56,101 running build_scripts 2021-05-05T07:26:56,102 creating build/scripts-3.5 2021-05-05T07:26:56,104 copying and adjusting scripts/differential_modification -> build/scripts-3.5 2021-05-05T07:26:56,108 copying and adjusting scripts/allele_specific_modification -> build/scripts-3.5 2021-05-05T07:26:56,109 changing mode of build/scripts-3.5/differential_modification from 644 to 755 2021-05-05T07:26:56,110 changing mode of build/scripts-3.5/allele_specific_modification from 644 to 755 2021-05-05T07:26:56,118 installing to build/bdist.linux-armv7l/wheel 2021-05-05T07:26:56,119 running install 2021-05-05T07:26:56,121 running install_lib 2021-05-05T07:26:56,129 creating build/bdist.linux-armv7l 2021-05-05T07:26:56,129 creating build/bdist.linux-armv7l/wheel 2021-05-05T07:26:56,133 creating build/bdist.linux-armv7l/wheel/scripts 2021-05-05T07:26:56,136 copying build/lib/scripts/annotate_calls_by_phase.py -> build/bdist.linux-armv7l/wheel/scripts 2021-05-05T07:26:56,140 copying build/lib/scripts/genome-wide-QC.py -> build/bdist.linux-armv7l/wheel/scripts 2021-05-05T07:26:56,144 copying build/lib/scripts/split_calls_by_phase.py -> build/bdist.linux-armv7l/wheel/scripts 2021-05-05T07:26:56,148 copying build/lib/scripts/__init__.py -> build/bdist.linux-armv7l/wheel/scripts 2021-05-05T07:26:56,152 copying build/lib/scripts/sorting_and_multiple_testing_correction.py -> build/bdist.linux-armv7l/wheel/scripts 2021-05-05T07:26:56,156 copying build/lib/scripts/split_calls_by_longshot_phase.py -> build/bdist.linux-armv7l/wheel/scripts 2021-05-05T07:26:56,160 copying build/lib/scripts/allele_specific_modification -> build/bdist.linux-armv7l/wheel/scripts 2021-05-05T07:26:56,165 copying build/lib/scripts/calculate_methylation_frequency.py -> build/bdist.linux-armv7l/wheel/scripts 2021-05-05T07:26:56,170 copying build/lib/scripts/differential_modification -> build/bdist.linux-armv7l/wheel/scripts 2021-05-05T07:26:56,178 creating build/bdist.linux-armv7l/wheel/methplotlib 2021-05-05T07:26:56,182 creating build/bdist.linux-armv7l/wheel/methplotlib/differential 2021-05-05T07:26:56,185 copying build/lib/methplotlib/differential/__init__.py -> build/bdist.linux-armv7l/wheel/methplotlib/differential 2021-05-05T07:26:56,189 copying build/lib/methplotlib/differential/differential.py -> build/bdist.linux-armv7l/wheel/methplotlib/differential 2021-05-05T07:26:56,193 copying build/lib/methplotlib/annotation.py -> build/bdist.linux-armv7l/wheel/methplotlib 2021-05-05T07:26:56,198 copying build/lib/methplotlib/version.py -> build/bdist.linux-armv7l/wheel/methplotlib 2021-05-05T07:26:56,202 copying build/lib/methplotlib/__init__.py -> build/bdist.linux-armv7l/wheel/methplotlib 2021-05-05T07:26:56,206 copying build/lib/methplotlib/helpers.py -> build/bdist.linux-armv7l/wheel/methplotlib 2021-05-05T07:26:56,212 copying build/lib/methplotlib/import_methylation.py -> build/bdist.linux-armv7l/wheel/methplotlib 2021-05-05T07:26:56,219 copying build/lib/methplotlib/utils.py -> build/bdist.linux-armv7l/wheel/methplotlib 2021-05-05T07:26:56,226 copying build/lib/methplotlib/plots.py -> build/bdist.linux-armv7l/wheel/methplotlib 2021-05-05T07:26:56,232 copying build/lib/methplotlib/methplotlib.py -> build/bdist.linux-armv7l/wheel/methplotlib 2021-05-05T07:26:56,237 copying build/lib/methplotlib/qc.py -> build/bdist.linux-armv7l/wheel/methplotlib 2021-05-05T07:26:56,241 running install_egg_info 2021-05-05T07:26:56,267 Copying methplotlib.egg-info to build/bdist.linux-armv7l/wheel/methplotlib-0.18.1-py3.5.egg-info 2021-05-05T07:26:56,300 running install_scripts 2021-05-05T07:26:56,440 creating build/bdist.linux-armv7l/wheel/methplotlib-0.18.1.data 2021-05-05T07:26:56,441 creating build/bdist.linux-armv7l/wheel/methplotlib-0.18.1.data/scripts 2021-05-05T07:26:56,443 copying build/scripts-3.5/allele_specific_modification -> build/bdist.linux-armv7l/wheel/methplotlib-0.18.1.data/scripts 2021-05-05T07:26:56,448 copying build/scripts-3.5/differential_modification -> build/bdist.linux-armv7l/wheel/methplotlib-0.18.1.data/scripts 2021-05-05T07:26:56,452 changing mode of build/bdist.linux-armv7l/wheel/methplotlib-0.18.1.data/scripts/allele_specific_modification to 755 2021-05-05T07:26:56,452 changing mode of build/bdist.linux-armv7l/wheel/methplotlib-0.18.1.data/scripts/differential_modification to 755 2021-05-05T07:26:56,551 creating build/bdist.linux-armv7l/wheel/methplotlib-0.18.1.dist-info/WHEEL 2021-05-05T07:26:56,861 Building wheel for methplotlib (setup.py): finished with status 'done' 2021-05-05T07:26:56,866 Created wheel for methplotlib: filename=methplotlib-0.18.1-py3-none-any.whl size=32161 sha256=79d7924a40e79b183201bc9c5db61ad804ef3feb61505097070b52b4cc3c5b81 2021-05-05T07:26:56,867 Stored in directory: /tmp/pip-ephem-wheel-cache-k6d79_oa/wheels/aa/4c/55/2bc9beccebcfb1d1b6bccdac1cdc9ccf455c84e39fc0775b1d 2021-05-05T07:26:56,899 Successfully built methplotlib 2021-05-05T07:26:56,911 Removed build tracker: '/tmp/pip-req-tracker-wc_4s65_'