2021-05-05T14:16:40,838 DEPRECATION: Python 3.5 reached the end of its life on September 13th, 2020. Please upgrade your Python as Python 3.5 is no longer maintained. pip 21.0 will drop support for Python 3.5 in January 2021. pip 21.0 will remove support for this functionality. 2021-05-05T14:16:41,569 Created temporary directory: /tmp/pip-ephem-wheel-cache-vst4nqht 2021-05-05T14:16:41,574 Created temporary directory: /tmp/pip-req-tracker-dfhl5yym 2021-05-05T14:16:41,575 Initialized build tracking at /tmp/pip-req-tracker-dfhl5yym 2021-05-05T14:16:41,575 Created build tracker: /tmp/pip-req-tracker-dfhl5yym 2021-05-05T14:16:41,576 Entered build tracker: /tmp/pip-req-tracker-dfhl5yym 2021-05-05T14:16:41,577 Created temporary directory: /tmp/pip-wheel-xvpr_pk2 2021-05-05T14:16:41,643 1 location(s) to search for versions of rcsb-utils-chem: 2021-05-05T14:16:41,643 * https://pypi.org/simple/rcsb-utils-chem/ 2021-05-05T14:16:41,644 Fetching project page and analyzing links: https://pypi.org/simple/rcsb-utils-chem/ 2021-05-05T14:16:41,646 Getting page https://pypi.org/simple/rcsb-utils-chem/ 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https://files.pythonhosted.org/packages/b7/c6/0ee5162e57e55335b9ab7a2ddf3fbcba25414f0eb53d372bce73a18d5dea/rcsb.utils.chem-0.70.tar.gz#sha256=7691f2c75ed252606f6574c760b5086deb60090f1ece931401de79a2bd267bf4 (from https://pypi.org/simple/rcsb-utils-chem/), version: 0.70 2021-05-05T14:16:42,212 Found link https://files.pythonhosted.org/packages/64/e1/2b14e8b1f25a2b5fc735f7c18031d8505024d6143f37b248405451c63000/rcsb.utils.chem-0.71.tar.gz#sha256=ed5b048b75c1f2a64c648690965a6eecaafcdb60ff916beeccb0785e4009f5ea (from https://pypi.org/simple/rcsb-utils-chem/), version: 0.71 2021-05-05T14:16:42,251 Given no hashes to check 1 links for project 'rcsb-utils-chem': discarding no candidates 2021-05-05T14:16:42,289 Collecting rcsb-utils-chem==0.71 2021-05-05T14:16:42,293 Created temporary directory: /tmp/pip-unpack-iyp4dmxv 2021-05-05T14:16:42,609 Downloading rcsb.utils.chem-0.71.tar.gz (81 kB) 2021-05-05T14:16:42,978 Added rcsb-utils-chem==0.71 from https://files.pythonhosted.org/packages/64/e1/2b14e8b1f25a2b5fc735f7c18031d8505024d6143f37b248405451c63000/rcsb.utils.chem-0.71.tar.gz#sha256=ed5b048b75c1f2a64c648690965a6eecaafcdb60ff916beeccb0785e4009f5ea to build tracker '/tmp/pip-req-tracker-dfhl5yym' 2021-05-05T14:16:42,982 Running setup.py (path:/tmp/pip-wheel-xvpr_pk2/rcsb-utils-chem_b555ff2ec7f9411d9263721461f1f2c8/setup.py) egg_info for package rcsb-utils-chem 2021-05-05T14:16:42,984 Created temporary directory: /tmp/pip-pip-egg-info-i4hbt89b 2021-05-05T14:16:42,985 Running command python setup.py egg_info 2021-05-05T14:16:45,393 running egg_info 2021-05-05T14:16:45,399 creating /tmp/pip-pip-egg-info-i4hbt89b/rcsb.utils.chem.egg-info 2021-05-05T14:16:45,403 writing dependency_links to /tmp/pip-pip-egg-info-i4hbt89b/rcsb.utils.chem.egg-info/dependency_links.txt 2021-05-05T14:16:45,405 writing entry points to /tmp/pip-pip-egg-info-i4hbt89b/rcsb.utils.chem.egg-info/entry_points.txt 2021-05-05T14:16:45,408 writing /tmp/pip-pip-egg-info-i4hbt89b/rcsb.utils.chem.egg-info/PKG-INFO 2021-05-05T14:16:45,413 writing top-level names to /tmp/pip-pip-egg-info-i4hbt89b/rcsb.utils.chem.egg-info/top_level.txt 2021-05-05T14:16:45,416 writing requirements to /tmp/pip-pip-egg-info-i4hbt89b/rcsb.utils.chem.egg-info/requires.txt 2021-05-05T14:16:45,421 writing manifest file '/tmp/pip-pip-egg-info-i4hbt89b/rcsb.utils.chem.egg-info/SOURCES.txt' 2021-05-05T14:16:45,801 reading manifest file '/tmp/pip-pip-egg-info-i4hbt89b/rcsb.utils.chem.egg-info/SOURCES.txt' 2021-05-05T14:16:45,805 reading manifest template 'MANIFEST.in' 2021-05-05T14:16:45,813 writing manifest file '/tmp/pip-pip-egg-info-i4hbt89b/rcsb.utils.chem.egg-info/SOURCES.txt' 2021-05-05T14:16:45,948 Source in /tmp/pip-wheel-xvpr_pk2/rcsb-utils-chem_b555ff2ec7f9411d9263721461f1f2c8 has version 0.71, which satisfies requirement rcsb-utils-chem==0.71 from https://files.pythonhosted.org/packages/64/e1/2b14e8b1f25a2b5fc735f7c18031d8505024d6143f37b248405451c63000/rcsb.utils.chem-0.71.tar.gz#sha256=ed5b048b75c1f2a64c648690965a6eecaafcdb60ff916beeccb0785e4009f5ea 2021-05-05T14:16:45,949 Removed rcsb-utils-chem==0.71 from https://files.pythonhosted.org/packages/64/e1/2b14e8b1f25a2b5fc735f7c18031d8505024d6143f37b248405451c63000/rcsb.utils.chem-0.71.tar.gz#sha256=ed5b048b75c1f2a64c648690965a6eecaafcdb60ff916beeccb0785e4009f5ea from build tracker '/tmp/pip-req-tracker-dfhl5yym' 2021-05-05T14:16:45,959 Created temporary directory: /tmp/pip-unpack-q2dugxdp 2021-05-05T14:16:45,960 Building wheels for collected packages: rcsb-utils-chem 2021-05-05T14:16:45,969 Created temporary directory: /tmp/pip-wheel-qiuuos0c 2021-05-05T14:16:45,970 Building wheel for rcsb-utils-chem (setup.py): started 2021-05-05T14:16:45,971 Destination directory: /tmp/pip-wheel-qiuuos0c 2021-05-05T14:16:45,972 Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-xvpr_pk2/rcsb-utils-chem_b555ff2ec7f9411d9263721461f1f2c8/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-xvpr_pk2/rcsb-utils-chem_b555ff2ec7f9411d9263721461f1f2c8/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-qiuuos0c 2021-05-05T14:16:48,459 running bdist_wheel 2021-05-05T14:16:48,477 running build 2021-05-05T14:16:48,478 running build_py 2021-05-05T14:16:48,816 creating build 2021-05-05T14:16:48,817 creating build/lib 2021-05-05T14:16:48,819 creating build/lib/rcsb 2021-05-05T14:16:48,821 copying rcsb/__init__.py -> build/lib/rcsb 2021-05-05T14:16:48,827 creating build/lib/rcsb/utils 2021-05-05T14:16:48,829 copying rcsb/utils/__init__.py -> build/lib/rcsb/utils 2021-05-05T14:16:48,836 creating build/lib/rcsb/utils/chem 2021-05-05T14:16:48,839 copying rcsb/utils/chem/OeSearchMoleculeProvider.py -> build/lib/rcsb/utils/chem 2021-05-05T14:16:48,847 copying rcsb/utils/chem/OeSubStructSearchUtils.py -> build/lib/rcsb/utils/chem 2021-05-05T14:16:48,854 copying rcsb/utils/chem/ChemCompSearchWrapper.py -> build/lib/rcsb/utils/chem 2021-05-05T14:16:48,863 copying rcsb/utils/chem/OeMoleculeFactory.py -> build/lib/rcsb/utils/chem 2021-05-05T14:16:48,874 copying rcsb/utils/chem/__init__.py -> build/lib/rcsb/utils/chem 2021-05-05T14:16:48,879 copying rcsb/utils/chem/OeSearchUtils.py -> build/lib/rcsb/utils/chem 2021-05-05T14:16:48,885 copying rcsb/utils/chem/RdMoleculeFactory.py -> build/lib/rcsb/utils/chem 2021-05-05T14:16:48,890 copying rcsb/utils/chem/IoUtils.py -> build/lib/rcsb/utils/chem 2021-05-05T14:16:48,896 copying rcsb/utils/chem/PdbxChemComp.py -> build/lib/rcsb/utils/chem 2021-05-05T14:16:48,903 copying rcsb/utils/chem/OeDepict.py -> build/lib/rcsb/utils/chem 2021-05-05T14:16:48,910 copying rcsb/utils/chem/BatchChemSearch.py -> build/lib/rcsb/utils/chem 2021-05-05T14:16:48,917 copying rcsb/utils/chem/OeIoUtils.py -> build/lib/rcsb/utils/chem 2021-05-05T14:16:48,925 copying rcsb/utils/chem/OeDepictAlign.py -> build/lib/rcsb/utils/chem 2021-05-05T14:16:48,935 copying rcsb/utils/chem/ChemCompMoleculeProvider.py -> build/lib/rcsb/utils/chem 2021-05-05T14:16:48,940 copying rcsb/utils/chem/PdbxChemCompConstants.py -> build/lib/rcsb/utils/chem 2021-05-05T14:16:48,946 copying rcsb/utils/chem/ChemCompSearchIndexProvider.py -> build/lib/rcsb/utils/chem 2021-05-05T14:16:48,954 copying rcsb/utils/chem/ObMoleculeFactory.py -> build/lib/rcsb/utils/chem 2021-05-05T14:16:48,961 copying rcsb/utils/chem/OeMoleculeProvider.py -> build/lib/rcsb/utils/chem 2021-05-05T14:16:48,966 copying rcsb/utils/chem/ChemCompDepictWrapper.py -> build/lib/rcsb/utils/chem 2021-05-05T14:16:48,972 copying rcsb/utils/chem/MoleculeAnnotationsCompare.py -> build/lib/rcsb/utils/chem 2021-05-05T14:16:48,978 copying rcsb/utils/chem/MolecularFormula.py -> build/lib/rcsb/utils/chem 2021-05-05T14:16:48,984 copying rcsb/utils/chem/OeChemCompUtils.py -> build/lib/rcsb/utils/chem 2021-05-05T14:16:48,992 copying rcsb/utils/chem/OeCommonUtils.py -> build/lib/rcsb/utils/chem 2021-05-05T14:16:48,998 copying rcsb/utils/chem/CactvsMoleculeFactory.py -> build/lib/rcsb/utils/chem 2021-05-05T14:16:49,004 copying rcsb/utils/chem/FailList.py -> build/lib/rcsb/utils/chem 2021-05-05T14:16:49,018 copying rcsb/utils/chem/cactvsAnnotateMol.py -> build/lib/rcsb/utils/chem 2021-05-05T14:16:49,023 copying rcsb/utils/chem/OeAlignUtils.py -> build/lib/rcsb/utils/chem 2021-05-05T14:16:49,031 copying rcsb/utils/chem/ChemCompIndexProvider.py -> build/lib/rcsb/utils/chem 2021-05-05T14:16:49,073 installing to build/bdist.linux-armv7l/wheel 2021-05-05T14:16:49,074 running install 2021-05-05T14:16:49,076 running install_lib 2021-05-05T14:16:49,084 creating build/bdist.linux-armv7l 2021-05-05T14:16:49,085 creating build/bdist.linux-armv7l/wheel 2021-05-05T14:16:49,089 creating build/bdist.linux-armv7l/wheel/rcsb 2021-05-05T14:16:49,091 copying build/lib/rcsb/__init__.py -> build/bdist.linux-armv7l/wheel/rcsb 2021-05-05T14:16:49,097 creating build/bdist.linux-armv7l/wheel/rcsb/utils 2021-05-05T14:16:49,099 copying build/lib/rcsb/utils/__init__.py -> build/bdist.linux-armv7l/wheel/rcsb/utils 2021-05-05T14:16:49,105 creating build/bdist.linux-armv7l/wheel/rcsb/utils/chem 2021-05-05T14:16:49,107 copying build/lib/rcsb/utils/chem/OeSearchMoleculeProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem 2021-05-05T14:16:49,115 copying build/lib/rcsb/utils/chem/OeSubStructSearchUtils.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem 2021-05-05T14:16:49,122 copying build/lib/rcsb/utils/chem/ChemCompSearchWrapper.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem 2021-05-05T14:16:49,131 copying build/lib/rcsb/utils/chem/OeMoleculeFactory.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem 2021-05-05T14:16:49,142 copying build/lib/rcsb/utils/chem/__init__.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem 2021-05-05T14:16:49,148 copying build/lib/rcsb/utils/chem/OeSearchUtils.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem 2021-05-05T14:16:49,155 copying build/lib/rcsb/utils/chem/RdMoleculeFactory.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem 2021-05-05T14:16:49,162 copying build/lib/rcsb/utils/chem/IoUtils.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem 2021-05-05T14:16:49,169 copying build/lib/rcsb/utils/chem/PdbxChemComp.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem 2021-05-05T14:16:49,176 copying build/lib/rcsb/utils/chem/OeDepict.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem 2021-05-05T14:16:49,183 copying build/lib/rcsb/utils/chem/BatchChemSearch.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem 2021-05-05T14:16:49,190 copying build/lib/rcsb/utils/chem/OeIoUtils.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem 2021-05-05T14:16:49,199 copying build/lib/rcsb/utils/chem/OeDepictAlign.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem 2021-05-05T14:16:49,210 copying build/lib/rcsb/utils/chem/ChemCompMoleculeProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem 2021-05-05T14:16:49,217 copying build/lib/rcsb/utils/chem/PdbxChemCompConstants.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem 2021-05-05T14:16:49,223 copying build/lib/rcsb/utils/chem/ChemCompSearchIndexProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem 2021-05-05T14:16:49,231 copying build/lib/rcsb/utils/chem/ObMoleculeFactory.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem 2021-05-05T14:16:49,237 copying build/lib/rcsb/utils/chem/OeMoleculeProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem 2021-05-05T14:16:49,244 copying build/lib/rcsb/utils/chem/ChemCompDepictWrapper.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem 2021-05-05T14:16:49,251 copying build/lib/rcsb/utils/chem/MoleculeAnnotationsCompare.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem 2021-05-05T14:16:49,257 copying build/lib/rcsb/utils/chem/MolecularFormula.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem 2021-05-05T14:16:49,261 copying build/lib/rcsb/utils/chem/OeChemCompUtils.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem 2021-05-05T14:16:49,267 copying build/lib/rcsb/utils/chem/OeCommonUtils.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem 2021-05-05T14:16:49,273 copying build/lib/rcsb/utils/chem/CactvsMoleculeFactory.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem 2021-05-05T14:16:49,279 copying build/lib/rcsb/utils/chem/FailList.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem 2021-05-05T14:16:49,295 copying build/lib/rcsb/utils/chem/cactvsAnnotateMol.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem 2021-05-05T14:16:49,301 copying build/lib/rcsb/utils/chem/OeAlignUtils.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem 2021-05-05T14:16:49,309 copying build/lib/rcsb/utils/chem/ChemCompIndexProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem 2021-05-05T14:16:49,315 running install_egg_info 2021-05-05T14:16:49,366 running egg_info 2021-05-05T14:16:49,369 writing entry points to rcsb.utils.chem.egg-info/entry_points.txt 2021-05-05T14:16:49,371 writing dependency_links to rcsb.utils.chem.egg-info/dependency_links.txt 2021-05-05T14:16:49,375 writing rcsb.utils.chem.egg-info/PKG-INFO 2021-05-05T14:16:49,379 writing requirements to rcsb.utils.chem.egg-info/requires.txt 2021-05-05T14:16:49,381 writing top-level names to rcsb.utils.chem.egg-info/top_level.txt 2021-05-05T14:16:49,397 reading manifest file 'rcsb.utils.chem.egg-info/SOURCES.txt' 2021-05-05T14:16:49,402 reading manifest template 'MANIFEST.in' 2021-05-05T14:16:49,413 writing manifest file 'rcsb.utils.chem.egg-info/SOURCES.txt' 2021-05-05T14:16:49,416 Copying rcsb.utils.chem.egg-info to build/bdist.linux-armv7l/wheel/rcsb.utils.chem-0.71-py3.5.egg-info 2021-05-05T14:16:49,455 running install_scripts 2021-05-05T14:16:49,678 creating build/bdist.linux-armv7l/wheel/rcsb.utils.chem-0.71.dist-info/WHEEL 2021-05-05T14:16:50,074 Building wheel for rcsb-utils-chem (setup.py): finished with status 'done' 2021-05-05T14:16:50,080 Created wheel for rcsb-utils-chem: filename=rcsb.utils.chem-0.71-py2.py3-none-any.whl size=95527 sha256=1fb887d3a825a075f8a609c27ec7c5b50194d73dafa10f00240857ac5bc35bbd 2021-05-05T14:16:50,081 Stored in directory: /tmp/pip-ephem-wheel-cache-vst4nqht/wheels/56/7e/ab/3e95678042312ad6d17bc2f5fa6ef597bd5c91f4df842cf9bf 2021-05-05T14:16:50,101 Successfully built rcsb-utils-chem 2021-05-05T14:16:50,122 Removed build tracker: '/tmp/pip-req-tracker-dfhl5yym'