2021-05-16T07:23:40,305 DEPRECATION: Python 3.5 reached the end of its life on September 13th, 2020. Please upgrade your Python as Python 3.5 is no longer maintained. pip 21.0 will drop support for Python 3.5 in January 2021. pip 21.0 will remove support for this functionality. 2021-05-16T07:23:41,168 Created temporary directory: /tmp/pip-ephem-wheel-cache-u82uokai 2021-05-16T07:23:41,173 Created temporary directory: /tmp/pip-req-tracker-ksa720xu 2021-05-16T07:23:41,174 Initialized build tracking at /tmp/pip-req-tracker-ksa720xu 2021-05-16T07:23:41,175 Created build tracker: /tmp/pip-req-tracker-ksa720xu 2021-05-16T07:23:41,175 Entered build tracker: /tmp/pip-req-tracker-ksa720xu 2021-05-16T07:23:41,176 Created temporary directory: /tmp/pip-wheel-tkgxl_9a 2021-05-16T07:23:41,240 1 location(s) to search for versions of ultra-bioinformatics: 2021-05-16T07:23:41,240 * https://pypi.org/simple/ultra-bioinformatics/ 2021-05-16T07:23:41,241 Fetching project page and analyzing links: https://pypi.org/simple/ultra-bioinformatics/ 2021-05-16T07:23:41,243 Getting page https://pypi.org/simple/ultra-bioinformatics/ 2021-05-16T07:23:41,247 Found index url https://pypi.org/simple 2021-05-16T07:23:41,575 Found link https://files.pythonhosted.org/packages/65/29/65df1f02482f26455e91116a925a37bc462f3661f2974c1876d0b33d8c08/ultra_bioinformatics-0.0.1.tar.gz#sha256=a4e61a998acdde447ba08aa6e43845ac44e27466e38032739c016a6f29972b2a (from https://pypi.org/simple/ultra-bioinformatics/) (requires-python:!=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, <4), version: 0.0.1 2021-05-16T07:23:41,579 Found link https://files.pythonhosted.org/packages/5f/43/f6a6c124ffb15a523e4a9b3feb91d28c60cb49478e4a8d308baea169a489/ultra_bioinformatics-0.0.2.tar.gz#sha256=fa4c15927e73e25d98ce7884765ce5af26986cd646a1162d840d9e019cbd66e3 (from https://pypi.org/simple/ultra-bioinformatics/) (requires-python:!=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, <4), version: 0.0.2 2021-05-16T07:23:41,582 Found link https://files.pythonhosted.org/packages/6a/58/a30039878dcb4bb59cdbeba01097be3820098a63a1310549f222810f085d/ultra_bioinformatics-0.0.2.1.tar.gz#sha256=4efc237f9759fe47808c22c1ee564412edf39c3dc21b0aa6b2af74009d2d64a7 (from https://pypi.org/simple/ultra-bioinformatics/) (requires-python:!=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, <4), version: 0.0.2.1 2021-05-16T07:23:41,585 Found link https://files.pythonhosted.org/packages/63/eb/35e910e857d69319193e83b7597015c0db24697a23d5c54908b01faaf0db/ultra_bioinformatics-0.0.2.2.tar.gz#sha256=7557c1f0137b290c24bbf5a3255f028c5c26ab03aa14264d0cf7aa0a20499818 (from https://pypi.org/simple/ultra-bioinformatics/) (requires-python:!=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, <4), version: 0.0.2.2 2021-05-16T07:23:41,589 Found link https://files.pythonhosted.org/packages/24/c0/bf7ee45736b40edc7ef301675d1399fe7dfa4caa2232851353b163e8669e/ultra_bioinformatics-0.0.2.3.tar.gz#sha256=a9686a3fafee9539aff6728667008e892f4a5acdf9558edfb48b7f2fdf8fc2b4 (from https://pypi.org/simple/ultra-bioinformatics/) (requires-python:!=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, <4), version: 0.0.2.3 2021-05-16T07:23:41,592 Found link https://files.pythonhosted.org/packages/d3/e3/75cb2bea730add7403f940e5e869099dbdaa458f246aa66f056d127e2661/ultra_bioinformatics-0.0.2.4.tar.gz#sha256=953e1dcad9bcec9c461e9b6492cfb2b76d907859a313c38764d20a9e6dca49b9 (from https://pypi.org/simple/ultra-bioinformatics/) (requires-python:!=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, <4), version: 0.0.2.4 2021-05-16T07:23:41,595 Found link https://files.pythonhosted.org/packages/4a/ac/418045e8389f9b16204a79b7a984397a29e838873de5bce16e43e03f3f45/ultra_bioinformatics-0.0.3.tar.gz#sha256=7589ed76616a5ff9c8a37acc472d909e971fd94d32abf8bab84c4b7a369b935f (from https://pypi.org/simple/ultra-bioinformatics/) (requires-python:!=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, <4), version: 0.0.3 2021-05-16T07:23:41,598 Found link https://files.pythonhosted.org/packages/0e/cb/691d689d951455c649df951dc5af784023a72e0e16911bb0014b015417d4/ultra_bioinformatics-0.0.3.1.tar.gz#sha256=589cc94b3b3e7aced842232bb7781734892ef7887fdfe6d1209f2f17a4e5016d (from https://pypi.org/simple/ultra-bioinformatics/) (requires-python:!=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, <4), version: 0.0.3.1 2021-05-16T07:23:41,631 Given no hashes to check 1 links for project 'ultra-bioinformatics': discarding no candidates 2021-05-16T07:23:41,665 Collecting ultra-bioinformatics==0.0.3.1 2021-05-16T07:23:41,669 Created temporary directory: /tmp/pip-unpack-qni4mk61 2021-05-16T07:23:41,885 Downloading ultra_bioinformatics-0.0.3.1.tar.gz (55 kB) 2021-05-16T07:23:42,083 Added ultra-bioinformatics==0.0.3.1 from https://files.pythonhosted.org/packages/0e/cb/691d689d951455c649df951dc5af784023a72e0e16911bb0014b015417d4/ultra_bioinformatics-0.0.3.1.tar.gz#sha256=589cc94b3b3e7aced842232bb7781734892ef7887fdfe6d1209f2f17a4e5016d to build tracker '/tmp/pip-req-tracker-ksa720xu' 2021-05-16T07:23:42,086 Running setup.py (path:/tmp/pip-wheel-tkgxl_9a/ultra-bioinformatics_7b739d6cbd8d4121b543ea39f977cb7f/setup.py) egg_info for package ultra-bioinformatics 2021-05-16T07:23:42,089 Created temporary directory: /tmp/pip-pip-egg-info-1jrkqnmf 2021-05-16T07:23:42,090 Running command python setup.py egg_info 2021-05-16T07:23:44,765 running egg_info 2021-05-16T07:23:44,772 creating /tmp/pip-pip-egg-info-1jrkqnmf/ultra_bioinformatics.egg-info 2021-05-16T07:23:44,776 writing top-level names to /tmp/pip-pip-egg-info-1jrkqnmf/ultra_bioinformatics.egg-info/top_level.txt 2021-05-16T07:23:44,779 writing requirements to /tmp/pip-pip-egg-info-1jrkqnmf/ultra_bioinformatics.egg-info/requires.txt 2021-05-16T07:23:44,782 writing dependency_links to /tmp/pip-pip-egg-info-1jrkqnmf/ultra_bioinformatics.egg-info/dependency_links.txt 2021-05-16T07:23:44,784 writing /tmp/pip-pip-egg-info-1jrkqnmf/ultra_bioinformatics.egg-info/PKG-INFO 2021-05-16T07:23:44,792 writing manifest file '/tmp/pip-pip-egg-info-1jrkqnmf/ultra_bioinformatics.egg-info/SOURCES.txt' 2021-05-16T07:23:45,167 reading manifest file '/tmp/pip-pip-egg-info-1jrkqnmf/ultra_bioinformatics.egg-info/SOURCES.txt' 2021-05-16T07:23:45,176 writing manifest file '/tmp/pip-pip-egg-info-1jrkqnmf/ultra_bioinformatics.egg-info/SOURCES.txt' 2021-05-16T07:23:45,316 Source in /tmp/pip-wheel-tkgxl_9a/ultra-bioinformatics_7b739d6cbd8d4121b543ea39f977cb7f has version 0.0.3.1, which satisfies requirement ultra-bioinformatics==0.0.3.1 from https://files.pythonhosted.org/packages/0e/cb/691d689d951455c649df951dc5af784023a72e0e16911bb0014b015417d4/ultra_bioinformatics-0.0.3.1.tar.gz#sha256=589cc94b3b3e7aced842232bb7781734892ef7887fdfe6d1209f2f17a4e5016d 2021-05-16T07:23:45,318 Removed ultra-bioinformatics==0.0.3.1 from https://files.pythonhosted.org/packages/0e/cb/691d689d951455c649df951dc5af784023a72e0e16911bb0014b015417d4/ultra_bioinformatics-0.0.3.1.tar.gz#sha256=589cc94b3b3e7aced842232bb7781734892ef7887fdfe6d1209f2f17a4e5016d from build tracker '/tmp/pip-req-tracker-ksa720xu' 2021-05-16T07:23:45,353 Created temporary directory: /tmp/pip-unpack-4_8s_i1c 2021-05-16T07:23:45,354 Building wheels for collected packages: ultra-bioinformatics 2021-05-16T07:23:45,363 Created temporary directory: /tmp/pip-wheel-fyks9vfs 2021-05-16T07:23:45,364 Building wheel for ultra-bioinformatics (setup.py): started 2021-05-16T07:23:45,365 Destination directory: /tmp/pip-wheel-fyks9vfs 2021-05-16T07:23:45,365 Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-tkgxl_9a/ultra-bioinformatics_7b739d6cbd8d4121b543ea39f977cb7f/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-tkgxl_9a/ultra-bioinformatics_7b739d6cbd8d4121b543ea39f977cb7f/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-fyks9vfs 2021-05-16T07:23:47,717 running bdist_wheel 2021-05-16T07:23:47,733 running build 2021-05-16T07:23:47,734 running build_py 2021-05-16T07:23:48,075 creating build 2021-05-16T07:23:48,076 creating build/lib 2021-05-16T07:23:48,078 creating build/lib/modules 2021-05-16T07:23:48,081 copying modules/__init__.py -> build/lib/modules 2021-05-16T07:23:48,085 copying modules/colinear_solver.py -> build/lib/modules 2021-05-16T07:23:48,092 copying modules/sam_output.py -> build/lib/modules 2021-05-16T07:23:48,099 copying modules/mem_wrapper.py -> build/lib/modules 2021-05-16T07:23:48,106 copying modules/align.py -> build/lib/modules 2021-05-16T07:23:48,115 copying modules/classify_alignment2.py -> build/lib/modules 2021-05-16T07:23:48,119 copying modules/prefilter_genomic_reads.py -> build/lib/modules 2021-05-16T07:23:48,124 copying modules/create_augmented_gene.py -> build/lib/modules 2021-05-16T07:23:48,133 copying modules/help_functions.py -> build/lib/modules 2021-05-16T07:23:48,141 copying modules/range_query_max_search_tree.py -> build/lib/modules 2021-05-16T07:23:48,148 copying modules/classify_read_with_mams.py -> build/lib/modules 2021-05-16T07:23:48,158 running build_scripts 2021-05-16T07:23:48,159 creating build/scripts-3.5 2021-05-16T07:23:48,162 copying and adjusting uLTRA -> build/scripts-3.5 2021-05-16T07:23:48,170 changing mode of build/scripts-3.5/uLTRA from 644 to 755 2021-05-16T07:23:48,182 installing to build/bdist.linux-armv7l/wheel 2021-05-16T07:23:48,183 running install 2021-05-16T07:23:48,187 running install_lib 2021-05-16T07:23:48,196 creating build/bdist.linux-armv7l 2021-05-16T07:23:48,197 creating build/bdist.linux-armv7l/wheel 2021-05-16T07:23:48,201 creating build/bdist.linux-armv7l/wheel/modules 2021-05-16T07:23:48,203 copying build/lib/modules/__init__.py -> build/bdist.linux-armv7l/wheel/modules 2021-05-16T07:23:48,207 copying build/lib/modules/colinear_solver.py -> build/bdist.linux-armv7l/wheel/modules 2021-05-16T07:23:48,214 copying build/lib/modules/sam_output.py -> build/bdist.linux-armv7l/wheel/modules 2021-05-16T07:23:48,221 copying build/lib/modules/mem_wrapper.py -> build/bdist.linux-armv7l/wheel/modules 2021-05-16T07:23:48,227 copying build/lib/modules/align.py -> build/bdist.linux-armv7l/wheel/modules 2021-05-16T07:23:48,237 copying build/lib/modules/classify_alignment2.py -> build/bdist.linux-armv7l/wheel/modules 2021-05-16T07:23:48,243 copying build/lib/modules/prefilter_genomic_reads.py -> build/bdist.linux-armv7l/wheel/modules 2021-05-16T07:23:48,249 copying build/lib/modules/create_augmented_gene.py -> build/bdist.linux-armv7l/wheel/modules 2021-05-16T07:23:48,259 copying build/lib/modules/help_functions.py -> build/bdist.linux-armv7l/wheel/modules 2021-05-16T07:23:48,266 copying build/lib/modules/range_query_max_search_tree.py -> build/bdist.linux-armv7l/wheel/modules 2021-05-16T07:23:48,273 copying build/lib/modules/classify_read_with_mams.py -> build/bdist.linux-armv7l/wheel/modules 2021-05-16T07:23:48,282 running install_egg_info 2021-05-16T07:23:48,331 running egg_info 2021-05-16T07:23:48,333 writing dependency_links to ultra_bioinformatics.egg-info/dependency_links.txt 2021-05-16T07:23:48,336 writing ultra_bioinformatics.egg-info/PKG-INFO 2021-05-16T07:23:48,342 writing top-level names to ultra_bioinformatics.egg-info/top_level.txt 2021-05-16T07:23:48,345 writing requirements to ultra_bioinformatics.egg-info/requires.txt 2021-05-16T07:23:48,356 reading manifest file 'ultra_bioinformatics.egg-info/SOURCES.txt' 2021-05-16T07:23:48,366 writing manifest file 'ultra_bioinformatics.egg-info/SOURCES.txt' 2021-05-16T07:23:48,370 Copying ultra_bioinformatics.egg-info to build/bdist.linux-armv7l/wheel/ultra_bioinformatics-0.0.3.1-py3.5.egg-info 2021-05-16T07:23:48,396 running install_scripts 2021-05-16T07:23:48,541 creating build/bdist.linux-armv7l/wheel/ultra_bioinformatics-0.0.3.1.data 2021-05-16T07:23:48,542 creating build/bdist.linux-armv7l/wheel/ultra_bioinformatics-0.0.3.1.data/scripts 2021-05-16T07:23:48,544 copying build/scripts-3.5/uLTRA -> build/bdist.linux-armv7l/wheel/ultra_bioinformatics-0.0.3.1.data/scripts 2021-05-16T07:23:48,553 changing mode of build/bdist.linux-armv7l/wheel/ultra_bioinformatics-0.0.3.1.data/scripts/uLTRA to 755 2021-05-16T07:23:48,639 creating build/bdist.linux-armv7l/wheel/ultra_bioinformatics-0.0.3.1.dist-info/WHEEL 2021-05-16T07:23:48,920 Building wheel for ultra-bioinformatics (setup.py): finished with status 'done' 2021-05-16T07:23:48,925 Created wheel for ultra-bioinformatics: filename=ultra_bioinformatics-0.0.3.1-py3-none-any.whl size=58109 sha256=2886df995afe1823804d8b1c2ff91940a043c350de8967638ab39bf9c1a7d863 2021-05-16T07:23:48,926 Stored in directory: /tmp/pip-ephem-wheel-cache-u82uokai/wheels/91/15/3e/ff4daa7f8b1743027f52fa23cf93f9032467285fe0b7178b3f 2021-05-16T07:23:48,947 Successfully built ultra-bioinformatics 2021-05-16T07:23:48,961 Removed build tracker: '/tmp/pip-req-tracker-ksa720xu'