2021-05-16T07:39:52,412 DEPRECATION: Python 3.5 reached the end of its life on September 13th, 2020. Please upgrade your Python as Python 3.5 is no longer maintained. pip 21.0 will drop support for Python 3.5 in January 2021. pip 21.0 will remove support for this functionality.
2021-05-16T07:39:53,097 Created temporary directory: /tmp/pip-ephem-wheel-cache-m_kuv76k
2021-05-16T07:39:53,102 Created temporary directory: /tmp/pip-req-tracker-gvll6ulk
2021-05-16T07:39:53,103 Initialized build tracking at /tmp/pip-req-tracker-gvll6ulk
2021-05-16T07:39:53,103 Created build tracker: /tmp/pip-req-tracker-gvll6ulk
2021-05-16T07:39:53,103 Entered build tracker: /tmp/pip-req-tracker-gvll6ulk
2021-05-16T07:39:53,105 Created temporary directory: /tmp/pip-wheel-ufyqgqhf
2021-05-16T07:39:53,179 1 location(s) to search for versions of ultra-bioinformatics:
2021-05-16T07:39:53,179 * https://pypi.org/simple/ultra-bioinformatics/
2021-05-16T07:39:53,180 Fetching project page and analyzing links: https://pypi.org/simple/ultra-bioinformatics/
2021-05-16T07:39:53,183 Getting page https://pypi.org/simple/ultra-bioinformatics/
2021-05-16T07:39:53,187 Found index url https://pypi.org/simple
2021-05-16T07:39:53,522   Found link https://files.pythonhosted.org/packages/65/29/65df1f02482f26455e91116a925a37bc462f3661f2974c1876d0b33d8c08/ultra_bioinformatics-0.0.1.tar.gz#sha256=a4e61a998acdde447ba08aa6e43845ac44e27466e38032739c016a6f29972b2a (from https://pypi.org/simple/ultra-bioinformatics/) (requires-python:!=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, <4), version: 0.0.1
2021-05-16T07:39:53,526   Found link https://files.pythonhosted.org/packages/5f/43/f6a6c124ffb15a523e4a9b3feb91d28c60cb49478e4a8d308baea169a489/ultra_bioinformatics-0.0.2.tar.gz#sha256=fa4c15927e73e25d98ce7884765ce5af26986cd646a1162d840d9e019cbd66e3 (from https://pypi.org/simple/ultra-bioinformatics/) (requires-python:!=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, <4), version: 0.0.2
2021-05-16T07:39:53,529   Found link https://files.pythonhosted.org/packages/6a/58/a30039878dcb4bb59cdbeba01097be3820098a63a1310549f222810f085d/ultra_bioinformatics-0.0.2.1.tar.gz#sha256=4efc237f9759fe47808c22c1ee564412edf39c3dc21b0aa6b2af74009d2d64a7 (from https://pypi.org/simple/ultra-bioinformatics/) (requires-python:!=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, <4), version: 0.0.2.1
2021-05-16T07:39:53,532   Found link https://files.pythonhosted.org/packages/63/eb/35e910e857d69319193e83b7597015c0db24697a23d5c54908b01faaf0db/ultra_bioinformatics-0.0.2.2.tar.gz#sha256=7557c1f0137b290c24bbf5a3255f028c5c26ab03aa14264d0cf7aa0a20499818 (from https://pypi.org/simple/ultra-bioinformatics/) (requires-python:!=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, <4), version: 0.0.2.2
2021-05-16T07:39:53,536   Found link https://files.pythonhosted.org/packages/24/c0/bf7ee45736b40edc7ef301675d1399fe7dfa4caa2232851353b163e8669e/ultra_bioinformatics-0.0.2.3.tar.gz#sha256=a9686a3fafee9539aff6728667008e892f4a5acdf9558edfb48b7f2fdf8fc2b4 (from https://pypi.org/simple/ultra-bioinformatics/) (requires-python:!=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, <4), version: 0.0.2.3
2021-05-16T07:39:53,539   Found link https://files.pythonhosted.org/packages/d3/e3/75cb2bea730add7403f940e5e869099dbdaa458f246aa66f056d127e2661/ultra_bioinformatics-0.0.2.4.tar.gz#sha256=953e1dcad9bcec9c461e9b6492cfb2b76d907859a313c38764d20a9e6dca49b9 (from https://pypi.org/simple/ultra-bioinformatics/) (requires-python:!=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, <4), version: 0.0.2.4
2021-05-16T07:39:53,542   Found link https://files.pythonhosted.org/packages/4a/ac/418045e8389f9b16204a79b7a984397a29e838873de5bce16e43e03f3f45/ultra_bioinformatics-0.0.3.tar.gz#sha256=7589ed76616a5ff9c8a37acc472d909e971fd94d32abf8bab84c4b7a369b935f (from https://pypi.org/simple/ultra-bioinformatics/) (requires-python:!=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, <4), version: 0.0.3
2021-05-16T07:39:53,545   Found link https://files.pythonhosted.org/packages/0e/cb/691d689d951455c649df951dc5af784023a72e0e16911bb0014b015417d4/ultra_bioinformatics-0.0.3.1.tar.gz#sha256=589cc94b3b3e7aced842232bb7781734892ef7887fdfe6d1209f2f17a4e5016d (from https://pypi.org/simple/ultra-bioinformatics/) (requires-python:!=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, <4), version: 0.0.3.1
2021-05-16T07:39:53,548   Found link https://files.pythonhosted.org/packages/3a/41/76487c452ba6bd13a8cf6c12f2ac6979da175d59b8613f0ddd61f98c72bb/ultra_bioinformatics-0.0.3.2.tar.gz#sha256=33b22d9edbc46914c8eef360dbdc1db647a7b49f3ebc221342adee0da0d4a4d4 (from https://pypi.org/simple/ultra-bioinformatics/) (requires-python:!=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, <4), version: 0.0.3.2
2021-05-16T07:39:53,579 Given no hashes to check 1 links for project 'ultra-bioinformatics': discarding no candidates
2021-05-16T07:39:53,610 Collecting ultra-bioinformatics==0.0.3.2
2021-05-16T07:39:53,617   Created temporary directory: /tmp/pip-unpack-rsm_4y21
2021-05-16T07:39:53,852   Downloading ultra_bioinformatics-0.0.3.2.tar.gz (55 kB)
2021-05-16T07:39:54,065   Added ultra-bioinformatics==0.0.3.2 from https://files.pythonhosted.org/packages/3a/41/76487c452ba6bd13a8cf6c12f2ac6979da175d59b8613f0ddd61f98c72bb/ultra_bioinformatics-0.0.3.2.tar.gz#sha256=33b22d9edbc46914c8eef360dbdc1db647a7b49f3ebc221342adee0da0d4a4d4 to build tracker '/tmp/pip-req-tracker-gvll6ulk'
2021-05-16T07:39:54,067     Running setup.py (path:/tmp/pip-wheel-ufyqgqhf/ultra-bioinformatics_a46a290abed84376922aba6bfa39da3e/setup.py) egg_info for package ultra-bioinformatics
2021-05-16T07:39:54,069     Created temporary directory: /tmp/pip-pip-egg-info-dq88a_11
2021-05-16T07:39:54,069     Running command python setup.py egg_info
2021-05-16T07:39:56,292     running egg_info
2021-05-16T07:39:56,299     creating /tmp/pip-pip-egg-info-dq88a_11/ultra_bioinformatics.egg-info
2021-05-16T07:39:56,302     writing dependency_links to /tmp/pip-pip-egg-info-dq88a_11/ultra_bioinformatics.egg-info/dependency_links.txt
2021-05-16T07:39:56,305     writing top-level names to /tmp/pip-pip-egg-info-dq88a_11/ultra_bioinformatics.egg-info/top_level.txt
2021-05-16T07:39:56,309     writing /tmp/pip-pip-egg-info-dq88a_11/ultra_bioinformatics.egg-info/PKG-INFO
2021-05-16T07:39:56,315     writing requirements to /tmp/pip-pip-egg-info-dq88a_11/ultra_bioinformatics.egg-info/requires.txt
2021-05-16T07:39:56,321     writing manifest file '/tmp/pip-pip-egg-info-dq88a_11/ultra_bioinformatics.egg-info/SOURCES.txt'
2021-05-16T07:39:56,697     reading manifest file '/tmp/pip-pip-egg-info-dq88a_11/ultra_bioinformatics.egg-info/SOURCES.txt'
2021-05-16T07:39:56,705     writing manifest file '/tmp/pip-pip-egg-info-dq88a_11/ultra_bioinformatics.egg-info/SOURCES.txt'
2021-05-16T07:39:56,843   Source in /tmp/pip-wheel-ufyqgqhf/ultra-bioinformatics_a46a290abed84376922aba6bfa39da3e has version 0.0.3.2, which satisfies requirement ultra-bioinformatics==0.0.3.2 from https://files.pythonhosted.org/packages/3a/41/76487c452ba6bd13a8cf6c12f2ac6979da175d59b8613f0ddd61f98c72bb/ultra_bioinformatics-0.0.3.2.tar.gz#sha256=33b22d9edbc46914c8eef360dbdc1db647a7b49f3ebc221342adee0da0d4a4d4
2021-05-16T07:39:56,845   Removed ultra-bioinformatics==0.0.3.2 from https://files.pythonhosted.org/packages/3a/41/76487c452ba6bd13a8cf6c12f2ac6979da175d59b8613f0ddd61f98c72bb/ultra_bioinformatics-0.0.3.2.tar.gz#sha256=33b22d9edbc46914c8eef360dbdc1db647a7b49f3ebc221342adee0da0d4a4d4 from build tracker '/tmp/pip-req-tracker-gvll6ulk'
2021-05-16T07:39:56,866 Created temporary directory: /tmp/pip-unpack-car_4t0s
2021-05-16T07:39:56,867 Building wheels for collected packages: ultra-bioinformatics
2021-05-16T07:39:56,876   Created temporary directory: /tmp/pip-wheel-8gkix_xc
2021-05-16T07:39:56,877   Building wheel for ultra-bioinformatics (setup.py): started
2021-05-16T07:39:56,877   Destination directory: /tmp/pip-wheel-8gkix_xc
2021-05-16T07:39:56,878   Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-ufyqgqhf/ultra-bioinformatics_a46a290abed84376922aba6bfa39da3e/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-ufyqgqhf/ultra-bioinformatics_a46a290abed84376922aba6bfa39da3e/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-8gkix_xc
2021-05-16T07:39:59,051   running bdist_wheel
2021-05-16T07:39:59,066   running build
2021-05-16T07:39:59,067   running build_py
2021-05-16T07:39:59,405   creating build
2021-05-16T07:39:59,406   creating build/lib
2021-05-16T07:39:59,408   creating build/lib/modules
2021-05-16T07:39:59,411   copying modules/colinear_solver.py -> build/lib/modules
2021-05-16T07:39:59,418   copying modules/range_query_max_search_tree.py -> build/lib/modules
2021-05-16T07:39:59,424   copying modules/prefilter_genomic_reads.py -> build/lib/modules
2021-05-16T07:39:59,431   copying modules/classify_read_with_mams.py -> build/lib/modules
2021-05-16T07:39:59,440   copying modules/create_augmented_gene.py -> build/lib/modules
2021-05-16T07:39:59,450   copying modules/classify_alignment2.py -> build/lib/modules
2021-05-16T07:39:59,456   copying modules/help_functions.py -> build/lib/modules
2021-05-16T07:39:59,463   copying modules/sam_output.py -> build/lib/modules
2021-05-16T07:39:59,470   copying modules/align.py -> build/lib/modules
2021-05-16T07:39:59,481   copying modules/mem_wrapper.py -> build/lib/modules
2021-05-16T07:39:59,487   copying modules/__init__.py -> build/lib/modules
2021-05-16T07:39:59,495   running build_scripts
2021-05-16T07:39:59,497   creating build/scripts-3.5
2021-05-16T07:39:59,501   copying and adjusting uLTRA -> build/scripts-3.5
2021-05-16T07:39:59,511   changing mode of build/scripts-3.5/uLTRA from 644 to 755
2021-05-16T07:39:59,518   installing to build/bdist.linux-armv7l/wheel
2021-05-16T07:39:59,519   running install
2021-05-16T07:39:59,521   running install_lib
2021-05-16T07:39:59,529   creating build/bdist.linux-armv7l
2021-05-16T07:39:59,529   creating build/bdist.linux-armv7l/wheel
2021-05-16T07:39:59,534   creating build/bdist.linux-armv7l/wheel/modules
2021-05-16T07:39:59,536   copying build/lib/modules/colinear_solver.py -> build/bdist.linux-armv7l/wheel/modules
2021-05-16T07:39:59,543   copying build/lib/modules/range_query_max_search_tree.py -> build/bdist.linux-armv7l/wheel/modules
2021-05-16T07:39:59,549   copying build/lib/modules/prefilter_genomic_reads.py -> build/bdist.linux-armv7l/wheel/modules
2021-05-16T07:39:59,555   copying build/lib/modules/classify_read_with_mams.py -> build/bdist.linux-armv7l/wheel/modules
2021-05-16T07:39:59,564   copying build/lib/modules/create_augmented_gene.py -> build/bdist.linux-armv7l/wheel/modules
2021-05-16T07:39:59,574   copying build/lib/modules/classify_alignment2.py -> build/bdist.linux-armv7l/wheel/modules
2021-05-16T07:39:59,580   copying build/lib/modules/help_functions.py -> build/bdist.linux-armv7l/wheel/modules
2021-05-16T07:39:59,587   copying build/lib/modules/sam_output.py -> build/bdist.linux-armv7l/wheel/modules
2021-05-16T07:39:59,594   copying build/lib/modules/align.py -> build/bdist.linux-armv7l/wheel/modules
2021-05-16T07:39:59,604   copying build/lib/modules/mem_wrapper.py -> build/bdist.linux-armv7l/wheel/modules
2021-05-16T07:39:59,610   copying build/lib/modules/__init__.py -> build/bdist.linux-armv7l/wheel/modules
2021-05-16T07:39:59,614   running install_egg_info
2021-05-16T07:39:59,664   running egg_info
2021-05-16T07:39:59,665   writing ultra_bioinformatics.egg-info/PKG-INFO
2021-05-16T07:39:59,672   writing requirements to ultra_bioinformatics.egg-info/requires.txt
2021-05-16T07:39:59,675   writing dependency_links to ultra_bioinformatics.egg-info/dependency_links.txt
2021-05-16T07:39:59,678   writing top-level names to ultra_bioinformatics.egg-info/top_level.txt
2021-05-16T07:39:59,688   reading manifest file 'ultra_bioinformatics.egg-info/SOURCES.txt'
2021-05-16T07:39:59,698   writing manifest file 'ultra_bioinformatics.egg-info/SOURCES.txt'
2021-05-16T07:39:59,701   Copying ultra_bioinformatics.egg-info to build/bdist.linux-armv7l/wheel/ultra_bioinformatics-0.0.3.2-py3.5.egg-info
2021-05-16T07:39:59,728   running install_scripts
2021-05-16T07:39:59,872   creating build/bdist.linux-armv7l/wheel/ultra_bioinformatics-0.0.3.2.data
2021-05-16T07:39:59,873   creating build/bdist.linux-armv7l/wheel/ultra_bioinformatics-0.0.3.2.data/scripts
2021-05-16T07:39:59,876   copying build/scripts-3.5/uLTRA -> build/bdist.linux-armv7l/wheel/ultra_bioinformatics-0.0.3.2.data/scripts
2021-05-16T07:39:59,884   changing mode of build/bdist.linux-armv7l/wheel/ultra_bioinformatics-0.0.3.2.data/scripts/uLTRA to 755
2021-05-16T07:39:59,959   creating build/bdist.linux-armv7l/wheel/ultra_bioinformatics-0.0.3.2.dist-info/WHEEL
2021-05-16T07:40:00,245   Building wheel for ultra-bioinformatics (setup.py): finished with status 'done'
2021-05-16T07:40:00,250   Created wheel for ultra-bioinformatics: filename=ultra_bioinformatics-0.0.3.2-py3-none-any.whl size=58085 sha256=bffc889eb3e35056846f860dac7c766bc67e9b7e135fb371c8857b32aaf63d56
2021-05-16T07:40:00,251   Stored in directory: /tmp/pip-ephem-wheel-cache-m_kuv76k/wheels/dd/d1/58/c3398f88c86a55e3322b5d87113b6b16c85509345523228dc3
2021-05-16T07:40:00,272 Successfully built ultra-bioinformatics
2021-05-16T07:40:00,286 Removed build tracker: '/tmp/pip-req-tracker-gvll6ulk'