2021-05-18T10:56:02,987 DEPRECATION: Python 3.5 reached the end of its life on September 13th, 2020. Please upgrade your Python as Python 3.5 is no longer maintained. pip 21.0 will drop support for Python 3.5 in January 2021. pip 21.0 will remove support for this functionality. 2021-05-18T10:56:03,700 Created temporary directory: /tmp/pip-ephem-wheel-cache-iov6vyik 2021-05-18T10:56:03,705 Created temporary directory: /tmp/pip-req-tracker-xzia1_qc 2021-05-18T10:56:03,706 Initialized build tracking at /tmp/pip-req-tracker-xzia1_qc 2021-05-18T10:56:03,707 Created build tracker: /tmp/pip-req-tracker-xzia1_qc 2021-05-18T10:56:03,707 Entered build tracker: /tmp/pip-req-tracker-xzia1_qc 2021-05-18T10:56:03,709 Created temporary directory: /tmp/pip-wheel-4lh4kyau 2021-05-18T10:56:03,772 1 location(s) to search for versions of wwpdb-utils-dp: 2021-05-18T10:56:03,772 * https://pypi.org/simple/wwpdb-utils-dp/ 2021-05-18T10:56:03,773 Fetching project page and analyzing links: https://pypi.org/simple/wwpdb-utils-dp/ 2021-05-18T10:56:03,775 Getting page https://pypi.org/simple/wwpdb-utils-dp/ 2021-05-18T10:56:03,779 Found index url https://pypi.org/simple 2021-05-18T10:56:04,099 Found link https://files.pythonhosted.org/packages/2b/e9/4bdee4e30f844d0d7a64774c9e9a3ecd2345094cfa9577b8bef6d1e7f42a/wwpdb.utils.dp-0.29.tar.gz#sha256=ae781b03e16a31336eebfc27f701094003f6247819118b0b21da8e1800995b59 (from https://pypi.org/simple/wwpdb-utils-dp/), version: 0.29 2021-05-18T10:56:04,100 Found link https://files.pythonhosted.org/packages/20/34/d9f9c76dbd4f9b19b2f2454347e47019d8878eb8b8b11aa2212da6485f5f/wwpdb.utils.dp-0.31.tar.gz#sha256=7686aec85b8c9d4203b1ca274f667838daa91b246225cb6582d205f9c87297cc (from https://pypi.org/simple/wwpdb-utils-dp/), version: 0.31 2021-05-18T10:56:04,130 Given no hashes to check 1 links for project 'wwpdb-utils-dp': discarding no candidates 2021-05-18T10:56:04,164 Collecting wwpdb-utils-dp==0.31 2021-05-18T10:56:04,168 Created temporary directory: /tmp/pip-unpack-fcsv0_rp 2021-05-18T10:56:04,386 Downloading wwpdb.utils.dp-0.31.tar.gz (44 kB) 2021-05-18T10:56:04,618 Added wwpdb-utils-dp==0.31 from https://files.pythonhosted.org/packages/20/34/d9f9c76dbd4f9b19b2f2454347e47019d8878eb8b8b11aa2212da6485f5f/wwpdb.utils.dp-0.31.tar.gz#sha256=7686aec85b8c9d4203b1ca274f667838daa91b246225cb6582d205f9c87297cc to build tracker '/tmp/pip-req-tracker-xzia1_qc' 2021-05-18T10:56:04,620 Running setup.py (path:/tmp/pip-wheel-4lh4kyau/wwpdb-utils-dp_610f6021a7334f04a8dc3a92af3d164f/setup.py) egg_info for package wwpdb-utils-dp 2021-05-18T10:56:04,622 Created temporary directory: /tmp/pip-pip-egg-info-2hz94qui 2021-05-18T10:56:04,622 Running command python setup.py egg_info 2021-05-18T10:56:07,011 running egg_info 2021-05-18T10:56:07,020 creating /tmp/pip-pip-egg-info-2hz94qui/wwpdb.utils.dp.egg-info 2021-05-18T10:56:07,024 writing entry points to /tmp/pip-pip-egg-info-2hz94qui/wwpdb.utils.dp.egg-info/entry_points.txt 2021-05-18T10:56:07,027 writing top-level names to /tmp/pip-pip-egg-info-2hz94qui/wwpdb.utils.dp.egg-info/top_level.txt 2021-05-18T10:56:07,029 writing /tmp/pip-pip-egg-info-2hz94qui/wwpdb.utils.dp.egg-info/PKG-INFO 2021-05-18T10:56:07,034 writing dependency_links to /tmp/pip-pip-egg-info-2hz94qui/wwpdb.utils.dp.egg-info/dependency_links.txt 2021-05-18T10:56:07,037 writing requirements to /tmp/pip-pip-egg-info-2hz94qui/wwpdb.utils.dp.egg-info/requires.txt 2021-05-18T10:56:07,042 writing manifest file '/tmp/pip-pip-egg-info-2hz94qui/wwpdb.utils.dp.egg-info/SOURCES.txt' 2021-05-18T10:56:07,421 reading manifest file '/tmp/pip-pip-egg-info-2hz94qui/wwpdb.utils.dp.egg-info/SOURCES.txt' 2021-05-18T10:56:07,425 reading manifest template 'MANIFEST.in' 2021-05-18T10:56:07,433 writing manifest file '/tmp/pip-pip-egg-info-2hz94qui/wwpdb.utils.dp.egg-info/SOURCES.txt' 2021-05-18T10:56:07,568 Source in /tmp/pip-wheel-4lh4kyau/wwpdb-utils-dp_610f6021a7334f04a8dc3a92af3d164f has version 0.31, which satisfies requirement wwpdb-utils-dp==0.31 from https://files.pythonhosted.org/packages/20/34/d9f9c76dbd4f9b19b2f2454347e47019d8878eb8b8b11aa2212da6485f5f/wwpdb.utils.dp-0.31.tar.gz#sha256=7686aec85b8c9d4203b1ca274f667838daa91b246225cb6582d205f9c87297cc 2021-05-18T10:56:07,570 Removed wwpdb-utils-dp==0.31 from https://files.pythonhosted.org/packages/20/34/d9f9c76dbd4f9b19b2f2454347e47019d8878eb8b8b11aa2212da6485f5f/wwpdb.utils.dp-0.31.tar.gz#sha256=7686aec85b8c9d4203b1ca274f667838daa91b246225cb6582d205f9c87297cc from build tracker '/tmp/pip-req-tracker-xzia1_qc' 2021-05-18T10:56:07,579 Created temporary directory: /tmp/pip-unpack-980pxc48 2021-05-18T10:56:07,580 Building wheels for collected packages: wwpdb-utils-dp 2021-05-18T10:56:07,589 Created temporary directory: /tmp/pip-wheel-h88zpzls 2021-05-18T10:56:07,590 Building wheel for wwpdb-utils-dp (setup.py): started 2021-05-18T10:56:07,590 Destination directory: /tmp/pip-wheel-h88zpzls 2021-05-18T10:56:07,591 Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-4lh4kyau/wwpdb-utils-dp_610f6021a7334f04a8dc3a92af3d164f/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-4lh4kyau/wwpdb-utils-dp_610f6021a7334f04a8dc3a92af3d164f/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-h88zpzls 2021-05-18T10:56:09,991 running bdist_wheel 2021-05-18T10:56:10,008 running build 2021-05-18T10:56:10,009 running build_py 2021-05-18T10:56:10,350 creating build 2021-05-18T10:56:10,352 creating build/lib 2021-05-18T10:56:10,353 creating build/lib/wwpdb 2021-05-18T10:56:10,356 copying wwpdb/__init__.py -> build/lib/wwpdb 2021-05-18T10:56:10,363 creating build/lib/wwpdb/utils 2021-05-18T10:56:10,364 copying wwpdb/utils/__init__.py -> build/lib/wwpdb/utils 2021-05-18T10:56:10,371 creating build/lib/wwpdb/utils/dp 2021-05-18T10:56:10,373 copying wwpdb/utils/dp/PdbxStripCategory.py -> build/lib/wwpdb/utils/dp 2021-05-18T10:56:10,379 copying wwpdb/utils/dp/__init__.py -> build/lib/wwpdb/utils/dp 2021-05-18T10:56:10,384 copying wwpdb/utils/dp/ValidationWrapper.py -> build/lib/wwpdb/utils/dp 2021-05-18T10:56:10,391 copying wwpdb/utils/dp/PdbxMergeCategory.py -> build/lib/wwpdb/utils/dp 2021-05-18T10:56:10,398 copying wwpdb/utils/dp/DensityWrapper.py -> build/lib/wwpdb/utils/dp 2021-05-18T10:56:10,405 copying wwpdb/utils/dp/RunRemote.py -> build/lib/wwpdb/utils/dp 2021-05-18T10:56:10,411 copying wwpdb/utils/dp/PdbxSFMapCoefficients.py -> build/lib/wwpdb/utils/dp 2021-05-18T10:56:10,417 copying wwpdb/utils/dp/DataFileAdapter.py -> build/lib/wwpdb/utils/dp 2021-05-18T10:56:10,423 copying wwpdb/utils/dp/PdbxChemShiftReport.py -> build/lib/wwpdb/utils/dp 2021-05-18T10:56:10,430 copying wwpdb/utils/dp/RcsbDpUtility.py -> build/lib/wwpdb/utils/dp 2021-05-18T10:56:10,455 creating build/lib/wwpdb/utils/dp/electron_density 2021-05-18T10:56:10,458 copying wwpdb/utils/dp/electron_density/common_functions.py -> build/lib/wwpdb/utils/dp/electron_density 2021-05-18T10:56:10,463 copying wwpdb/utils/dp/electron_density/__init__.py -> build/lib/wwpdb/utils/dp/electron_density 2021-05-18T10:56:10,468 copying wwpdb/utils/dp/electron_density/x_ray_density_map.py -> build/lib/wwpdb/utils/dp/electron_density 2021-05-18T10:56:10,477 copying wwpdb/utils/dp/electron_density/em_density_map.py -> build/lib/wwpdb/utils/dp/electron_density 2021-05-18T10:56:10,644 installing to build/bdist.linux-armv7l/wheel 2021-05-18T10:56:10,645 running install 2021-05-18T10:56:10,647 running install_lib 2021-05-18T10:56:10,655 creating build/bdist.linux-armv7l 2021-05-18T10:56:10,656 creating build/bdist.linux-armv7l/wheel 2021-05-18T10:56:10,660 creating build/bdist.linux-armv7l/wheel/wwpdb 2021-05-18T10:56:10,663 copying build/lib/wwpdb/__init__.py -> build/bdist.linux-armv7l/wheel/wwpdb 2021-05-18T10:56:10,669 creating build/bdist.linux-armv7l/wheel/wwpdb/utils 2021-05-18T10:56:10,672 creating build/bdist.linux-armv7l/wheel/wwpdb/utils/dp 2021-05-18T10:56:10,674 copying build/lib/wwpdb/utils/dp/PdbxStripCategory.py -> build/bdist.linux-armv7l/wheel/wwpdb/utils/dp 2021-05-18T10:56:10,680 copying build/lib/wwpdb/utils/dp/__init__.py -> build/bdist.linux-armv7l/wheel/wwpdb/utils/dp 2021-05-18T10:56:10,686 creating build/bdist.linux-armv7l/wheel/wwpdb/utils/dp/electron_density 2021-05-18T10:56:10,689 copying build/lib/wwpdb/utils/dp/electron_density/common_functions.py -> build/bdist.linux-armv7l/wheel/wwpdb/utils/dp/electron_density 2021-05-18T10:56:10,697 copying build/lib/wwpdb/utils/dp/electron_density/__init__.py -> build/bdist.linux-armv7l/wheel/wwpdb/utils/dp/electron_density 2021-05-18T10:56:10,702 copying build/lib/wwpdb/utils/dp/electron_density/x_ray_density_map.py -> build/bdist.linux-armv7l/wheel/wwpdb/utils/dp/electron_density 2021-05-18T10:56:10,709 copying build/lib/wwpdb/utils/dp/electron_density/em_density_map.py -> build/bdist.linux-armv7l/wheel/wwpdb/utils/dp/electron_density 2021-05-18T10:56:10,715 copying build/lib/wwpdb/utils/dp/ValidationWrapper.py -> build/bdist.linux-armv7l/wheel/wwpdb/utils/dp 2021-05-18T10:56:10,721 copying build/lib/wwpdb/utils/dp/PdbxMergeCategory.py -> build/bdist.linux-armv7l/wheel/wwpdb/utils/dp 2021-05-18T10:56:10,726 copying build/lib/wwpdb/utils/dp/DensityWrapper.py -> build/bdist.linux-armv7l/wheel/wwpdb/utils/dp 2021-05-18T10:56:10,732 copying build/lib/wwpdb/utils/dp/RunRemote.py -> build/bdist.linux-armv7l/wheel/wwpdb/utils/dp 2021-05-18T10:56:10,739 copying build/lib/wwpdb/utils/dp/PdbxSFMapCoefficients.py -> build/bdist.linux-armv7l/wheel/wwpdb/utils/dp 2021-05-18T10:56:10,746 copying build/lib/wwpdb/utils/dp/DataFileAdapter.py -> build/bdist.linux-armv7l/wheel/wwpdb/utils/dp 2021-05-18T10:56:10,753 copying build/lib/wwpdb/utils/dp/PdbxChemShiftReport.py -> build/bdist.linux-armv7l/wheel/wwpdb/utils/dp 2021-05-18T10:56:10,759 copying build/lib/wwpdb/utils/dp/RcsbDpUtility.py -> build/bdist.linux-armv7l/wheel/wwpdb/utils/dp 2021-05-18T10:56:10,785 copying build/lib/wwpdb/utils/__init__.py -> build/bdist.linux-armv7l/wheel/wwpdb/utils 2021-05-18T10:56:10,790 running install_egg_info 2021-05-18T10:56:10,847 running egg_info 2021-05-18T10:56:10,848 writing wwpdb.utils.dp.egg-info/PKG-INFO 2021-05-18T10:56:10,853 writing requirements to wwpdb.utils.dp.egg-info/requires.txt 2021-05-18T10:56:10,856 writing dependency_links to wwpdb.utils.dp.egg-info/dependency_links.txt 2021-05-18T10:56:10,858 writing top-level names to wwpdb.utils.dp.egg-info/top_level.txt 2021-05-18T10:56:10,861 writing entry points to wwpdb.utils.dp.egg-info/entry_points.txt 2021-05-18T10:56:10,881 reading manifest file 'wwpdb.utils.dp.egg-info/SOURCES.txt' 2021-05-18T10:56:10,889 reading manifest template 'MANIFEST.in' 2021-05-18T10:56:10,897 writing manifest file 'wwpdb.utils.dp.egg-info/SOURCES.txt' 2021-05-18T10:56:10,901 Copying wwpdb.utils.dp.egg-info to build/bdist.linux-armv7l/wheel/wwpdb.utils.dp-0.31-py3.5.egg-info 2021-05-18T10:56:10,938 running install_scripts 2021-05-18T10:56:11,171 creating build/bdist.linux-armv7l/wheel/wwpdb.utils.dp-0.31.dist-info/WHEEL 2021-05-18T10:56:11,482 Building wheel for wwpdb-utils-dp (setup.py): finished with status 'done' 2021-05-18T10:56:11,487 Created wheel for wwpdb-utils-dp: filename=wwpdb.utils.dp-0.31-py2.py3-none-any.whl size=51416 sha256=4ac7b46d1121c730bc744a4beccaefcbcea20d4eaf1d3641880e07d748f3938a 2021-05-18T10:56:11,488 Stored in directory: /tmp/pip-ephem-wheel-cache-iov6vyik/wheels/f9/3f/50/240bdc1c4d32af20adafa1448defba0c27a1df16f7d7063048 2021-05-18T10:56:11,507 Successfully built wwpdb-utils-dp 2021-05-18T10:56:11,522 Removed build tracker: '/tmp/pip-req-tracker-xzia1_qc'