2021-05-19T21:02:26,872 DEPRECATION: Python 3.5 reached the end of its life on September 13th, 2020. Please upgrade your Python as Python 3.5 is no longer maintained. pip 21.0 will drop support for Python 3.5 in January 2021. pip 21.0 will remove support for this functionality. 2021-05-19T21:02:27,594 Created temporary directory: /tmp/pip-ephem-wheel-cache-4mwvt0kh 2021-05-19T21:02:27,599 Created temporary directory: /tmp/pip-req-tracker-avl7b2sf 2021-05-19T21:02:27,600 Initialized build tracking at /tmp/pip-req-tracker-avl7b2sf 2021-05-19T21:02:27,601 Created build tracker: /tmp/pip-req-tracker-avl7b2sf 2021-05-19T21:02:27,601 Entered build tracker: /tmp/pip-req-tracker-avl7b2sf 2021-05-19T21:02:27,602 Created temporary directory: /tmp/pip-wheel-fe6qq7g1 2021-05-19T21:02:27,675 1 location(s) to search for versions of seqsearch: 2021-05-19T21:02:27,675 * https://pypi.org/simple/seqsearch/ 2021-05-19T21:02:27,676 Fetching project page and analyzing links: https://pypi.org/simple/seqsearch/ 2021-05-19T21:02:27,678 Getting page https://pypi.org/simple/seqsearch/ 2021-05-19T21:02:27,682 Found index url https://pypi.org/simple 2021-05-19T21:02:28,023 Found link https://files.pythonhosted.org/packages/b9/86/394e50b0351bd0d7ef82cda2e6728c5b94276ed1b0f63965050591a2eb69/seqsearch-1.0.1.tar.gz#sha256=5ee0bc0374bfbc83aa5ded7e65e561693a48f32a884f2711e69c2af016e50020 (from https://pypi.org/simple/seqsearch/), version: 1.0.1 2021-05-19T21:02:28,024 Found link https://files.pythonhosted.org/packages/4d/4e/8937a47fc27123c9f1db94abdcfcc88930fddd2a037a317c0ab3366822fa/seqsearch-1.0.3.tar.gz#sha256=0589b39aee4c22fb4972f581705f349e61db535fa08fabc6573b3da31fd8bbee (from https://pypi.org/simple/seqsearch/), version: 1.0.3 2021-05-19T21:02:28,025 Found link https://files.pythonhosted.org/packages/03/82/b0b08e0505b0c2bb7b4cbf120408949e215c001ec9d8e25a0945524984c0/seqsearch-1.2.1.tar.gz#sha256=80f0f8cf8612da93fbb1ae4145b4488e56bc05ad9ee3827ddbfdb34cf1671a24 (from https://pypi.org/simple/seqsearch/), version: 1.2.1 2021-05-19T21:02:28,026 Found link https://files.pythonhosted.org/packages/0e/f1/08aeaa1106b81b97da68a29e713f886f09bce613d8835be87ca9a3ab06d9/seqsearch-1.2.3.tar.gz#sha256=ae040fbc5c4bcf5a740fdfe9c6aa35405e9883628b9a095433efb8b0254a5ef9 (from https://pypi.org/simple/seqsearch/), version: 1.2.3 2021-05-19T21:02:28,027 Found link https://files.pythonhosted.org/packages/44/ac/402f17f7ea655766744e4ba7ea98d0a4720d74108fb516866a86d02dfe74/seqsearch-1.2.5.tar.gz#sha256=ae84b06de6faf54669f266509f7227f93a9d96f5aff8a161124e4202253e5315 (from https://pypi.org/simple/seqsearch/), version: 1.2.5 2021-05-19T21:02:28,028 Found link https://files.pythonhosted.org/packages/8c/d7/5cc74bd2a475ee31ec780a99a033d759da8d8ec986f312564aa1c49a5716/seqsearch-1.2.7.tar.gz#sha256=e1bda575ab3e4212957843042d137bf05b2658d640d81e9992c327145a2f8dd5 (from https://pypi.org/simple/seqsearch/), version: 1.2.7 2021-05-19T21:02:28,029 Found link https://files.pythonhosted.org/packages/85/40/27dfb84f51427fc02d55b817c2bae24cf67f26e32273c14c7fb761493110/seqsearch-1.2.9.tar.gz#sha256=2c8aa9bf83cb003a83d0b9f11716992f883f6bcd3d575fa16849e88a197361a1 (from https://pypi.org/simple/seqsearch/), version: 1.2.9 2021-05-19T21:02:28,030 Found link https://files.pythonhosted.org/packages/07/52/9fd17d7fbd40dbdedaf21e430d295031cca26a946658e6a9c124bc411122/seqsearch-1.3.1.tar.gz#sha256=9116a7a7d35081e297db9c2b9e7bb83ff39f0b9237e58485913795ed6a09dc39 (from https://pypi.org/simple/seqsearch/), version: 1.3.1 2021-05-19T21:02:28,030 Found link https://files.pythonhosted.org/packages/be/a3/12081ec889f28df1481c6af8cad2c02a2c758737dfb55e1c3aea484738f7/seqsearch-1.3.3.tar.gz#sha256=d109f43bc52d11106611e14e05bbc435b582aea202428cc1074f817b7603a2a1 (from https://pypi.org/simple/seqsearch/), version: 1.3.3 2021-05-19T21:02:28,031 Found link https://files.pythonhosted.org/packages/58/5c/8f67296a0a822a21d90fae8685c31f9bb30fd2a4009ed213b7a9b3d2bcf1/seqsearch-2.0.2.tar.gz#sha256=de72744fa42ba8c4e3bf115ab79075b4f00fce8e04b757c59644a0ae990b4d1b (from https://pypi.org/simple/seqsearch/), version: 2.0.2 2021-05-19T21:02:28,032 Found link https://files.pythonhosted.org/packages/7e/5c/5242dcbee22dab0ceede7a6f07fed6c0cafc751bb1e9656d3f1408aeee55/seqsearch-2.0.4.tar.gz#sha256=b023ae23651d93cba0eb2d089780a54763475a450ee5ec07888bdb0b89b22324 (from https://pypi.org/simple/seqsearch/), version: 2.0.4 2021-05-19T21:02:28,067 Given no hashes to check 1 links for project 'seqsearch': discarding no candidates 2021-05-19T21:02:28,101 Collecting seqsearch==2.0.4 2021-05-19T21:02:28,105 Created temporary directory: /tmp/pip-unpack-9pogo0dg 2021-05-19T21:02:28,324 Downloading seqsearch-2.0.4.tar.gz (21 kB) 2021-05-19T21:02:28,564 Added seqsearch==2.0.4 from https://files.pythonhosted.org/packages/7e/5c/5242dcbee22dab0ceede7a6f07fed6c0cafc751bb1e9656d3f1408aeee55/seqsearch-2.0.4.tar.gz#sha256=b023ae23651d93cba0eb2d089780a54763475a450ee5ec07888bdb0b89b22324 to build tracker '/tmp/pip-req-tracker-avl7b2sf' 2021-05-19T21:02:28,566 Running setup.py (path:/tmp/pip-wheel-fe6qq7g1/seqsearch_44cba79d4dab41078fe076753b6af4ee/setup.py) egg_info for package seqsearch 2021-05-19T21:02:28,567 Created temporary directory: /tmp/pip-pip-egg-info-oxuhexv8 2021-05-19T21:02:28,568 Running command python setup.py egg_info 2021-05-19T21:02:31,122 running egg_info 2021-05-19T21:02:31,128 creating /tmp/pip-pip-egg-info-oxuhexv8/seqsearch.egg-info 2021-05-19T21:02:31,131 writing /tmp/pip-pip-egg-info-oxuhexv8/seqsearch.egg-info/PKG-INFO 2021-05-19T21:02:31,137 writing requirements to /tmp/pip-pip-egg-info-oxuhexv8/seqsearch.egg-info/requires.txt 2021-05-19T21:02:31,139 writing top-level names to /tmp/pip-pip-egg-info-oxuhexv8/seqsearch.egg-info/top_level.txt 2021-05-19T21:02:31,141 writing dependency_links to /tmp/pip-pip-egg-info-oxuhexv8/seqsearch.egg-info/dependency_links.txt 2021-05-19T21:02:31,146 writing manifest file '/tmp/pip-pip-egg-info-oxuhexv8/seqsearch.egg-info/SOURCES.txt' 2021-05-19T21:02:31,500 package init file 'example/__init__.py' not found (or not a regular file) 2021-05-19T21:02:31,502 package init file 'scripts/__init__.py' not found (or not a regular file) 2021-05-19T21:02:31,507 package init file 'seqsearch/databases/mothur/__init__.py' not found (or not a regular file) 2021-05-19T21:02:31,509 package init file 'example/blast_object/__init__.py' not found (or not a regular file) 2021-05-19T21:02:31,511 package init file 'example/seqsearch_object/__init__.py' not found (or not a regular file) 2021-05-19T21:02:31,514 reading manifest file '/tmp/pip-pip-egg-info-oxuhexv8/seqsearch.egg-info/SOURCES.txt' 2021-05-19T21:02:31,518 reading manifest template 'MANIFEST.in' 2021-05-19T21:02:31,526 writing manifest file '/tmp/pip-pip-egg-info-oxuhexv8/seqsearch.egg-info/SOURCES.txt' 2021-05-19T21:02:31,663 Source in /tmp/pip-wheel-fe6qq7g1/seqsearch_44cba79d4dab41078fe076753b6af4ee has version 2.0.4, which satisfies requirement seqsearch==2.0.4 from https://files.pythonhosted.org/packages/7e/5c/5242dcbee22dab0ceede7a6f07fed6c0cafc751bb1e9656d3f1408aeee55/seqsearch-2.0.4.tar.gz#sha256=b023ae23651d93cba0eb2d089780a54763475a450ee5ec07888bdb0b89b22324 2021-05-19T21:02:31,665 Removed seqsearch==2.0.4 from https://files.pythonhosted.org/packages/7e/5c/5242dcbee22dab0ceede7a6f07fed6c0cafc751bb1e9656d3f1408aeee55/seqsearch-2.0.4.tar.gz#sha256=b023ae23651d93cba0eb2d089780a54763475a450ee5ec07888bdb0b89b22324 from build tracker '/tmp/pip-req-tracker-avl7b2sf' 2021-05-19T21:02:31,674 Created temporary directory: /tmp/pip-unpack-vq9znqja 2021-05-19T21:02:31,675 Building wheels for collected packages: seqsearch 2021-05-19T21:02:31,684 Created temporary directory: /tmp/pip-wheel-6fmcxgia 2021-05-19T21:02:31,685 Building wheel for seqsearch (setup.py): started 2021-05-19T21:02:31,686 Destination directory: /tmp/pip-wheel-6fmcxgia 2021-05-19T21:02:31,687 Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-fe6qq7g1/seqsearch_44cba79d4dab41078fe076753b6af4ee/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-fe6qq7g1/seqsearch_44cba79d4dab41078fe076753b6af4ee/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-6fmcxgia 2021-05-19T21:02:34,362 running bdist_wheel 2021-05-19T21:02:34,378 running build 2021-05-19T21:02:34,379 running build_py 2021-05-19T21:02:34,718 creating build 2021-05-19T21:02:34,719 creating build/lib 2021-05-19T21:02:34,721 creating build/lib/seqsearch 2021-05-19T21:02:34,724 copying seqsearch/__init__.py -> build/lib/seqsearch 2021-05-19T21:02:34,727 package init file 'example/__init__.py' not found (or not a regular file) 2021-05-19T21:02:34,728 package init file 'scripts/__init__.py' not found (or not a regular file) 2021-05-19T21:02:34,730 creating build/lib/scripts 2021-05-19T21:02:34,732 copying scripts/tmp_code.py -> build/lib/scripts 2021-05-19T21:02:34,739 creating build/lib/seqsearch/databases 2021-05-19T21:02:34,741 copying seqsearch/databases/__init__.py -> build/lib/seqsearch/databases 2021-05-19T21:02:34,747 copying seqsearch/databases/silva.py -> build/lib/seqsearch/databases 2021-05-19T21:02:34,753 copying seqsearch/databases/download.py -> build/lib/seqsearch/databases 2021-05-19T21:02:34,760 copying seqsearch/databases/pr_two.py -> build/lib/seqsearch/databases 2021-05-19T21:02:34,766 copying seqsearch/databases/pfam.py -> build/lib/seqsearch/databases 2021-05-19T21:02:34,773 copying seqsearch/databases/tigrfam.py -> build/lib/seqsearch/databases 2021-05-19T21:02:34,779 copying seqsearch/databases/string.py -> build/lib/seqsearch/databases 2021-05-19T21:02:34,785 copying seqsearch/databases/refseq.py -> build/lib/seqsearch/databases 2021-05-19T21:02:34,791 copying seqsearch/databases/nt.py -> build/lib/seqsearch/databases 2021-05-19T21:02:34,797 copying seqsearch/databases/ncbi_16s.py -> build/lib/seqsearch/databases 2021-05-19T21:02:34,803 copying seqsearch/databases/nr.py -> build/lib/seqsearch/databases 2021-05-19T21:02:34,812 creating build/lib/seqsearch/search 2021-05-19T21:02:34,815 copying seqsearch/search/parallel.py -> build/lib/seqsearch/search 2021-05-19T21:02:34,822 copying seqsearch/search/__init__.py -> build/lib/seqsearch/search 2021-05-19T21:02:34,829 copying seqsearch/search/core.py -> build/lib/seqsearch/search 2021-05-19T21:02:34,835 copying seqsearch/search/blast.py -> build/lib/seqsearch/search 2021-05-19T21:02:34,842 copying seqsearch/search/vsearch.py -> build/lib/seqsearch/search 2021-05-19T21:02:34,849 copying seqsearch/search/hmmer.py -> build/lib/seqsearch/search 2021-05-19T21:02:34,854 package init file 'seqsearch/databases/mothur/__init__.py' not found (or not a regular file) 2021-05-19T21:02:34,858 creating build/lib/seqsearch/databases/mothur 2021-05-19T21:02:34,861 copying seqsearch/databases/mothur/silva.py -> build/lib/seqsearch/databases/mothur 2021-05-19T21:02:34,868 copying seqsearch/databases/mothur/greengenes.py -> build/lib/seqsearch/databases/mothur 2021-05-19T21:02:34,873 copying seqsearch/databases/mothur/rdp.py -> build/lib/seqsearch/databases/mothur 2021-05-19T21:02:34,876 package init file 'example/blast_object/__init__.py' not found (or not a regular file) 2021-05-19T21:02:34,879 creating build/lib/example 2021-05-19T21:02:34,879 creating build/lib/example/blast_object 2021-05-19T21:02:34,883 copying example/blast_object/simple_blast.py -> build/lib/example/blast_object 2021-05-19T21:02:34,887 package init file 'example/seqsearch_object/__init__.py' not found (or not a regular file) 2021-05-19T21:02:34,889 creating build/lib/example/seqsearch_object 2021-05-19T21:02:34,892 copying example/seqsearch_object/simple_query.py -> build/lib/example/seqsearch_object 2021-05-19T21:02:34,897 running egg_info 2021-05-19T21:02:34,932 writing requirements to seqsearch.egg-info/requires.txt 2021-05-19T21:02:34,935 writing dependency_links to seqsearch.egg-info/dependency_links.txt 2021-05-19T21:02:34,938 writing seqsearch.egg-info/PKG-INFO 2021-05-19T21:02:34,942 writing top-level names to seqsearch.egg-info/top_level.txt 2021-05-19T21:02:34,968 reading manifest file 'seqsearch.egg-info/SOURCES.txt' 2021-05-19T21:02:34,975 reading manifest template 'MANIFEST.in' 2021-05-19T21:02:34,984 writing manifest file 'seqsearch.egg-info/SOURCES.txt' 2021-05-19T21:02:35,005 installing to build/bdist.linux-armv7l/wheel 2021-05-19T21:02:35,006 running install 2021-05-19T21:02:35,008 running install_lib 2021-05-19T21:02:35,017 creating build/bdist.linux-armv7l 2021-05-19T21:02:35,018 creating build/bdist.linux-armv7l/wheel 2021-05-19T21:02:35,021 creating build/bdist.linux-armv7l/wheel/seqsearch 2021-05-19T21:02:35,024 copying build/lib/seqsearch/__init__.py -> build/bdist.linux-armv7l/wheel/seqsearch 2021-05-19T21:02:35,030 creating build/bdist.linux-armv7l/wheel/seqsearch/databases 2021-05-19T21:02:35,032 copying build/lib/seqsearch/databases/__init__.py -> build/bdist.linux-armv7l/wheel/seqsearch/databases 2021-05-19T21:02:35,039 copying build/lib/seqsearch/databases/silva.py -> build/bdist.linux-armv7l/wheel/seqsearch/databases 2021-05-19T21:02:35,045 copying build/lib/seqsearch/databases/download.py -> build/bdist.linux-armv7l/wheel/seqsearch/databases 2021-05-19T21:02:35,051 copying build/lib/seqsearch/databases/pr_two.py -> build/bdist.linux-armv7l/wheel/seqsearch/databases 2021-05-19T21:02:35,057 copying build/lib/seqsearch/databases/pfam.py -> build/bdist.linux-armv7l/wheel/seqsearch/databases 2021-05-19T21:02:35,064 copying build/lib/seqsearch/databases/tigrfam.py -> build/bdist.linux-armv7l/wheel/seqsearch/databases 2021-05-19T21:02:35,070 copying build/lib/seqsearch/databases/string.py -> build/bdist.linux-armv7l/wheel/seqsearch/databases 2021-05-19T21:02:35,076 copying build/lib/seqsearch/databases/refseq.py -> build/bdist.linux-armv7l/wheel/seqsearch/databases 2021-05-19T21:02:35,081 copying build/lib/seqsearch/databases/nt.py -> build/bdist.linux-armv7l/wheel/seqsearch/databases 2021-05-19T21:02:35,087 copying build/lib/seqsearch/databases/ncbi_16s.py -> build/bdist.linux-armv7l/wheel/seqsearch/databases 2021-05-19T21:02:35,093 copying build/lib/seqsearch/databases/nr.py -> build/bdist.linux-armv7l/wheel/seqsearch/databases 2021-05-19T21:02:35,101 creating build/bdist.linux-armv7l/wheel/seqsearch/databases/mothur 2021-05-19T21:02:35,104 copying build/lib/seqsearch/databases/mothur/silva.py -> build/bdist.linux-armv7l/wheel/seqsearch/databases/mothur 2021-05-19T21:02:35,110 copying build/lib/seqsearch/databases/mothur/greengenes.py -> build/bdist.linux-armv7l/wheel/seqsearch/databases/mothur 2021-05-19T21:02:35,116 copying build/lib/seqsearch/databases/mothur/rdp.py -> build/bdist.linux-armv7l/wheel/seqsearch/databases/mothur 2021-05-19T21:02:35,124 creating build/bdist.linux-armv7l/wheel/seqsearch/search 2021-05-19T21:02:35,127 copying build/lib/seqsearch/search/parallel.py -> build/bdist.linux-armv7l/wheel/seqsearch/search 2021-05-19T21:02:35,134 copying build/lib/seqsearch/search/__init__.py -> build/bdist.linux-armv7l/wheel/seqsearch/search 2021-05-19T21:02:35,141 copying build/lib/seqsearch/search/core.py -> build/bdist.linux-armv7l/wheel/seqsearch/search 2021-05-19T21:02:35,147 copying build/lib/seqsearch/search/blast.py -> build/bdist.linux-armv7l/wheel/seqsearch/search 2021-05-19T21:02:35,155 copying build/lib/seqsearch/search/vsearch.py -> build/bdist.linux-armv7l/wheel/seqsearch/search 2021-05-19T21:02:35,162 copying build/lib/seqsearch/search/hmmer.py -> build/bdist.linux-armv7l/wheel/seqsearch/search 2021-05-19T21:02:35,170 creating build/bdist.linux-armv7l/wheel/example 2021-05-19T21:02:35,175 creating build/bdist.linux-armv7l/wheel/example/blast_object 2021-05-19T21:02:35,179 copying build/lib/example/blast_object/simple_blast.py -> build/bdist.linux-armv7l/wheel/example/blast_object 2021-05-19T21:02:35,187 creating build/bdist.linux-armv7l/wheel/example/seqsearch_object 2021-05-19T21:02:35,190 copying build/lib/example/seqsearch_object/simple_query.py -> build/bdist.linux-armv7l/wheel/example/seqsearch_object 2021-05-19T21:02:35,198 creating build/bdist.linux-armv7l/wheel/scripts 2021-05-19T21:02:35,201 copying build/lib/scripts/tmp_code.py -> build/bdist.linux-armv7l/wheel/scripts 2021-05-19T21:02:35,207 running install_egg_info 2021-05-19T21:02:35,234 Copying seqsearch.egg-info to build/bdist.linux-armv7l/wheel/seqsearch-2.0.4-py3.5.egg-info 2021-05-19T21:02:35,258 running install_scripts 2021-05-19T21:02:35,483 creating build/bdist.linux-armv7l/wheel/seqsearch-2.0.4.dist-info/WHEEL 2021-05-19T21:02:35,810 Building wheel for seqsearch (setup.py): finished with status 'done' 2021-05-19T21:02:35,815 Created wheel for seqsearch: filename=seqsearch-2.0.4-py3-none-any.whl size=35188 sha256=09e575a2461cfdf0d589d1cffce1b3395e826a89096a0a2060172f31e404cff2 2021-05-19T21:02:35,816 Stored in directory: /tmp/pip-ephem-wheel-cache-4mwvt0kh/wheels/0f/4b/c6/c4061d635062dba942a105a9e1e625cd4f9e8ffb44d1258722 2021-05-19T21:02:35,836 Successfully built seqsearch 2021-05-19T21:02:35,847 Removed build tracker: '/tmp/pip-req-tracker-avl7b2sf'