2021-05-27T02:05:30,513 Created temporary directory: /tmp/pip-ephem-wheel-cache-v7tfp3ve 2021-05-27T02:05:30,517 Created temporary directory: /tmp/pip-req-tracker-1ka9vhf9 2021-05-27T02:05:30,518 Initialized build tracking at /tmp/pip-req-tracker-1ka9vhf9 2021-05-27T02:05:30,518 Created build tracker: /tmp/pip-req-tracker-1ka9vhf9 2021-05-27T02:05:30,519 Entered build tracker: /tmp/pip-req-tracker-1ka9vhf9 2021-05-27T02:05:30,520 Created temporary directory: /tmp/pip-wheel-0u7sxhia 2021-05-27T02:05:30,560 1 location(s) to search for versions of ngs-tools: 2021-05-27T02:05:30,560 * https://pypi.org/simple/ngs-tools/ 2021-05-27T02:05:30,561 Fetching project page and analyzing links: https://pypi.org/simple/ngs-tools/ 2021-05-27T02:05:30,561 Getting page https://pypi.org/simple/ngs-tools/ 2021-05-27T02:05:30,563 Found index url https://pypi.org/simple 2021-05-27T02:05:30,655 Found link https://files.pythonhosted.org/packages/58/80/e31dc09e54b773fbc2638aeafdda2296ee3673ce1e81dc6f88dfa40eb238/ngs-tools-1.1.2.tar.gz#sha256=1655e20b854e794ff6a8f519ed9e892ef24b747ad94e01ae5aa1e2c1f6de6d5d (from https://pypi.org/simple/ngs-tools/) (requires-python:>=3.6), version: 1.1.2 2021-05-27T02:05:30,656 Found link https://files.pythonhosted.org/packages/1c/e2/3677810459709bec5bd67a2947155b242d40aca25542945e0ebb9f653505/ngs-tools-1.2.0.tar.gz#sha256=6462ce10eb5bf16c779815c467a6425f85736a7d716d876410efd75de01182fe (from https://pypi.org/simple/ngs-tools/) (requires-python:>=3.6), version: 1.2.0 2021-05-27T02:05:30,656 Skipping link: not a file: https://pypi.org/simple/ngs-tools/ 2021-05-27T02:05:30,669 Given no hashes to check 1 links for project 'ngs-tools': discarding no candidates 2021-05-27T02:05:30,684 Collecting ngs-tools==1.2.0 2021-05-27T02:05:30,686 Created temporary directory: /tmp/pip-unpack-z0w1du6d 2021-05-27T02:05:34,508 Downloading ngs-tools-1.2.0.tar.gz (20.4 MB) 2021-05-27T02:05:37,483 Added ngs-tools==1.2.0 from https://files.pythonhosted.org/packages/1c/e2/3677810459709bec5bd67a2947155b242d40aca25542945e0ebb9f653505/ngs-tools-1.2.0.tar.gz#sha256=6462ce10eb5bf16c779815c467a6425f85736a7d716d876410efd75de01182fe to build tracker '/tmp/pip-req-tracker-1ka9vhf9' 2021-05-27T02:05:37,484 Running setup.py (path:/tmp/pip-wheel-0u7sxhia/ngs-tools_6f6030ac4c794901ba1cc1494b4ae539/setup.py) egg_info for package ngs-tools 2021-05-27T02:05:37,485 Created temporary directory: /tmp/pip-pip-egg-info-0x0ia491 2021-05-27T02:05:37,486 Running command python setup.py egg_info 2021-05-27T02:05:38,501 running egg_info 2021-05-27T02:05:38,506 creating /tmp/pip-pip-egg-info-0x0ia491/ngs_tools.egg-info 2021-05-27T02:05:38,507 writing /tmp/pip-pip-egg-info-0x0ia491/ngs_tools.egg-info/PKG-INFO 2021-05-27T02:05:38,511 writing dependency_links to /tmp/pip-pip-egg-info-0x0ia491/ngs_tools.egg-info/dependency_links.txt 2021-05-27T02:05:38,515 writing requirements to /tmp/pip-pip-egg-info-0x0ia491/ngs_tools.egg-info/requires.txt 2021-05-27T02:05:38,516 writing top-level names to /tmp/pip-pip-egg-info-0x0ia491/ngs_tools.egg-info/top_level.txt 2021-05-27T02:05:38,520 writing manifest file '/tmp/pip-pip-egg-info-0x0ia491/ngs_tools.egg-info/SOURCES.txt' 2021-05-27T02:05:38,664 adding license file 'LICENSE' (matched pattern 'LICEN[CS]E*') 2021-05-27T02:05:38,667 reading manifest file '/tmp/pip-pip-egg-info-0x0ia491/ngs_tools.egg-info/SOURCES.txt' 2021-05-27T02:05:38,668 reading manifest template 'MANIFEST.in' 2021-05-27T02:05:38,674 writing manifest file '/tmp/pip-pip-egg-info-0x0ia491/ngs_tools.egg-info/SOURCES.txt' 2021-05-27T02:05:38,736 Source in /tmp/pip-wheel-0u7sxhia/ngs-tools_6f6030ac4c794901ba1cc1494b4ae539 has version 1.2.0, which satisfies requirement ngs-tools==1.2.0 from https://files.pythonhosted.org/packages/1c/e2/3677810459709bec5bd67a2947155b242d40aca25542945e0ebb9f653505/ngs-tools-1.2.0.tar.gz#sha256=6462ce10eb5bf16c779815c467a6425f85736a7d716d876410efd75de01182fe 2021-05-27T02:05:38,737 Removed ngs-tools==1.2.0 from https://files.pythonhosted.org/packages/1c/e2/3677810459709bec5bd67a2947155b242d40aca25542945e0ebb9f653505/ngs-tools-1.2.0.tar.gz#sha256=6462ce10eb5bf16c779815c467a6425f85736a7d716d876410efd75de01182fe from build tracker '/tmp/pip-req-tracker-1ka9vhf9' 2021-05-27T02:05:38,744 Created temporary directory: /tmp/pip-unpack-f_wtt1r_ 2021-05-27T02:05:38,745 Building wheels for collected packages: ngs-tools 2021-05-27T02:05:38,749 Created temporary directory: /tmp/pip-wheel-4w_h6jt2 2021-05-27T02:05:38,750 Building wheel for ngs-tools (setup.py): started 2021-05-27T02:05:38,750 Destination directory: /tmp/pip-wheel-4w_h6jt2 2021-05-27T02:05:38,751 Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-0u7sxhia/ngs-tools_6f6030ac4c794901ba1cc1494b4ae539/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-0u7sxhia/ngs-tools_6f6030ac4c794901ba1cc1494b4ae539/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-4w_h6jt2 2021-05-27T02:05:39,757 running bdist_wheel 2021-05-27T02:05:39,762 running build 2021-05-27T02:05:39,762 running build_py 2021-05-27T02:05:39,892 creating build 2021-05-27T02:05:39,892 creating build/lib 2021-05-27T02:05:39,893 creating build/lib/ngs_tools 2021-05-27T02:05:39,894 copying ngs_tools/utils.py -> build/lib/ngs_tools 2021-05-27T02:05:39,896 copying ngs_tools/chemistry.py -> build/lib/ngs_tools 2021-05-27T02:05:39,899 copying ngs_tools/__init__.py -> build/lib/ngs_tools 2021-05-27T02:05:39,901 copying ngs_tools/logging.py -> build/lib/ngs_tools 2021-05-27T02:05:39,904 copying ngs_tools/fastq.py -> build/lib/ngs_tools 2021-05-27T02:05:39,907 copying ngs_tools/sequence.py -> build/lib/ngs_tools 2021-05-27T02:05:39,910 copying ngs_tools/gtf.py -> build/lib/ngs_tools 2021-05-27T02:05:39,912 copying ngs_tools/bam.py -> build/lib/ngs_tools 2021-05-27T02:05:39,915 copying ngs_tools/fasta.py -> build/lib/ngs_tools 2021-05-27T02:05:39,917 running egg_info 2021-05-27T02:05:39,933 writing ngs_tools.egg-info/PKG-INFO 2021-05-27T02:05:39,935 writing dependency_links to ngs_tools.egg-info/dependency_links.txt 2021-05-27T02:05:39,937 writing requirements to ngs_tools.egg-info/requires.txt 2021-05-27T02:05:39,939 writing top-level names to ngs_tools.egg-info/top_level.txt 2021-05-27T02:05:39,945 adding license file 'LICENSE' (matched pattern 'LICEN[CS]E*') 2021-05-27T02:05:39,948 reading manifest file 'ngs_tools.egg-info/SOURCES.txt' 2021-05-27T02:05:39,952 reading manifest template 'MANIFEST.in' 2021-05-27T02:05:39,960 writing manifest file 'ngs_tools.egg-info/SOURCES.txt' 2021-05-27T02:05:39,964 creating build/lib/ngs_tools/whitelists 2021-05-27T02:05:39,965 copying ngs_tools/whitelists/10x_version1.txt.gz -> build/lib/ngs_tools/whitelists 2021-05-27T02:05:40,006 copying ngs_tools/whitelists/10x_version2.txt.gz -> build/lib/ngs_tools/whitelists 2021-05-27T02:05:40,059 copying ngs_tools/whitelists/10x_version3.txt.gz -> build/lib/ngs_tools/whitelists 2021-05-27T02:05:40,414 copying ngs_tools/whitelists/indrops_version3.txt.gz -> build/lib/ngs_tools/whitelists 2021-05-27T02:05:40,431 installing to build/bdist.linux-armv7l/wheel 2021-05-27T02:05:40,431 running install 2021-05-27T02:05:40,432 running install_lib 2021-05-27T02:05:40,436 creating build/bdist.linux-armv7l 2021-05-27T02:05:40,436 creating build/bdist.linux-armv7l/wheel 2021-05-27T02:05:40,438 creating build/bdist.linux-armv7l/wheel/ngs_tools 2021-05-27T02:05:40,439 copying build/lib/ngs_tools/utils.py -> build/bdist.linux-armv7l/wheel/ngs_tools 2021-05-27T02:05:40,442 copying build/lib/ngs_tools/chemistry.py -> build/bdist.linux-armv7l/wheel/ngs_tools 2021-05-27T02:05:40,446 copying build/lib/ngs_tools/__init__.py -> build/bdist.linux-armv7l/wheel/ngs_tools 2021-05-27T02:05:40,448 copying build/lib/ngs_tools/logging.py -> build/bdist.linux-armv7l/wheel/ngs_tools 2021-05-27T02:05:40,450 copying build/lib/ngs_tools/fastq.py -> build/bdist.linux-armv7l/wheel/ngs_tools 2021-05-27T02:05:40,453 creating build/bdist.linux-armv7l/wheel/ngs_tools/whitelists 2021-05-27T02:05:40,454 copying build/lib/ngs_tools/whitelists/10x_version2.txt.gz -> build/bdist.linux-armv7l/wheel/ngs_tools/whitelists 2021-05-27T02:05:40,512 copying build/lib/ngs_tools/whitelists/10x_version1.txt.gz -> build/bdist.linux-armv7l/wheel/ngs_tools/whitelists 2021-05-27T02:05:40,557 copying build/lib/ngs_tools/whitelists/indrops_version3.txt.gz -> build/bdist.linux-armv7l/wheel/ngs_tools/whitelists 2021-05-27T02:05:40,570 copying build/lib/ngs_tools/whitelists/10x_version3.txt.gz -> build/bdist.linux-armv7l/wheel/ngs_tools/whitelists 2021-05-27T02:05:40,934 copying build/lib/ngs_tools/sequence.py -> build/bdist.linux-armv7l/wheel/ngs_tools 2021-05-27T02:05:40,937 copying build/lib/ngs_tools/gtf.py -> build/bdist.linux-armv7l/wheel/ngs_tools 2021-05-27T02:05:40,940 copying build/lib/ngs_tools/bam.py -> build/bdist.linux-armv7l/wheel/ngs_tools 2021-05-27T02:05:40,942 copying build/lib/ngs_tools/fasta.py -> build/bdist.linux-armv7l/wheel/ngs_tools 2021-05-27T02:05:40,944 running install_egg_info 2021-05-27T02:05:40,954 Copying ngs_tools.egg-info to build/bdist.linux-armv7l/wheel/ngs_tools-1.2.0-py3.7.egg-info 2021-05-27T02:05:40,969 running install_scripts 2021-05-27T02:05:41,055 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2021-05-27T02:05:41,061 creating build/bdist.linux-armv7l/wheel/ngs_tools-1.2.0.dist-info/WHEEL 2021-05-27T02:05:41,064 creating '/tmp/pip-wheel-4w_h6jt2/ngs_tools-1.2.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2021-05-27T02:05:41,066 adding 'ngs_tools/__init__.py' 2021-05-27T02:05:41,069 adding 'ngs_tools/bam.py' 2021-05-27T02:05:41,071 adding 'ngs_tools/chemistry.py' 2021-05-27T02:05:41,073 adding 'ngs_tools/fasta.py' 2021-05-27T02:05:41,075 adding 'ngs_tools/fastq.py' 2021-05-27T02:05:41,078 adding 'ngs_tools/gtf.py' 2021-05-27T02:05:41,080 adding 'ngs_tools/logging.py' 2021-05-27T02:05:41,084 adding 'ngs_tools/sequence.py' 2021-05-27T02:05:41,086 adding 'ngs_tools/utils.py' 2021-05-27T02:05:41,341 adding 'ngs_tools/whitelists/10x_version1.txt.gz' 2021-05-27T02:05:41,617 adding 'ngs_tools/whitelists/10x_version2.txt.gz' 2021-05-27T02:05:43,810 adding 'ngs_tools/whitelists/10x_version3.txt.gz' 2021-05-27T02:05:43,990 adding 'ngs_tools/whitelists/indrops_version3.txt.gz' 2021-05-27T02:05:43,995 adding 'ngs_tools-1.2.0.dist-info/LICENSE' 2021-05-27T02:05:43,996 adding 'ngs_tools-1.2.0.dist-info/METADATA' 2021-05-27T02:05:43,997 adding 'ngs_tools-1.2.0.dist-info/WHEEL' 2021-05-27T02:05:43,998 adding 'ngs_tools-1.2.0.dist-info/top_level.txt' 2021-05-27T02:05:43,999 adding 'ngs_tools-1.2.0.dist-info/RECORD' 2021-05-27T02:05:44,281 removing build/bdist.linux-armv7l/wheel 2021-05-27T02:05:44,370 Building wheel for ngs-tools (setup.py): finished with status 'done' 2021-05-27T02:05:44,587 Created wheel for ngs-tools: filename=ngs_tools-1.2.0-py3-none-any.whl size=20329453 sha256=60dbcc1c5132c03998766fda20b622a4dce037ed6d7f0a627358e1bad4f4372c 2021-05-27T02:05:44,588 Stored in directory: /tmp/pip-ephem-wheel-cache-v7tfp3ve/wheels/1c/c4/95/ea92a2f2cea3f1626a3099bd71a5da2553a3822ed513b65df5 2021-05-27T02:05:44,607 Successfully built ngs-tools 2021-05-27T02:05:45,260 Removed build tracker: '/tmp/pip-req-tracker-1ka9vhf9'