2021-05-28T09:33:55,983 Created temporary directory: /tmp/pip-ephem-wheel-cache-bu1mtmgd
2021-05-28T09:33:55,987 Created temporary directory: /tmp/pip-req-tracker-rb12kr8j
2021-05-28T09:33:55,988 Initialized build tracking at /tmp/pip-req-tracker-rb12kr8j
2021-05-28T09:33:55,988 Created build tracker: /tmp/pip-req-tracker-rb12kr8j
2021-05-28T09:33:55,988 Entered build tracker: /tmp/pip-req-tracker-rb12kr8j
2021-05-28T09:33:55,989 Created temporary directory: /tmp/pip-wheel-zwwjh0co
2021-05-28T09:33:56,024 1 location(s) to search for versions of rdkit-to-params:
2021-05-28T09:33:56,024 * https://pypi.org/simple/rdkit-to-params/
2021-05-28T09:33:56,025 Fetching project page and analyzing links: https://pypi.org/simple/rdkit-to-params/
2021-05-28T09:33:56,026 Getting page https://pypi.org/simple/rdkit-to-params/
2021-05-28T09:33:56,027 Found index url https://pypi.org/simple
2021-05-28T09:33:56,121   Found link https://files.pythonhosted.org/packages/ef/e8/7a8a812f8d2954b8acdb661bcc9ee5a9d67dae96f96a66d75de2e90282d3/rdkit_to_params-1.tar.gz#sha256=56b7e26a5622a7ac90e54b8a3f4fab79cc8bb63b102aafb3f8c17bcf26df2df3 (from https://pypi.org/simple/rdkit-to-params/) (requires-python:>3.6), version: 1
2021-05-28T09:33:56,122   Found link https://files.pythonhosted.org/packages/54/ce/55e4c99a7500a7db8e785ee282208e50ee8dc541089185144622c9cecdcc/rdkit_to_params-1.0.1.tar.gz#sha256=d11f52ee51e9f79cf3befa26a9669fe7c99be41fff8c654293e5a63136b844f0 (from https://pypi.org/simple/rdkit-to-params/) (requires-python:>3.6), version: 1.0.1
2021-05-28T09:33:56,123   Found link https://files.pythonhosted.org/packages/14/06/f2f72e757eb7deea040c09abef0173a5e6f1023de515afee19d060b9a5f1/rdkit_to_params-1.0.2.tar.gz#sha256=5e169dd2a511f6d4a6747b46010b0d1a165d1ee5a34dd16614b87289d0d344e5 (from https://pypi.org/simple/rdkit-to-params/) (requires-python:>3.6), version: 1.0.2
2021-05-28T09:33:56,123   Found link https://files.pythonhosted.org/packages/cd/23/11617c465b9f3dc6ca9f52356ff4ac3e2f80211800b4205b8123a68a7f73/rdkit_to_params-1.0.4.tar.gz#sha256=74031df79149b4069dc924aa73df9e62dba77d7200473ad02c320c2cfd572aa5 (from https://pypi.org/simple/rdkit-to-params/) (requires-python:>3.6), version: 1.0.4
2021-05-28T09:33:56,124   Found link https://files.pythonhosted.org/packages/53/71/fa36800525e407ac79c355f6e97fefdb808964a7df1e43a088d396654c19/rdkit_to_params-1.0.5.tar.gz#sha256=39461952a6c30a27a23b57a99ca389e4b28d02a53e29d60ad3e9a86395965b3a (from https://pypi.org/simple/rdkit-to-params/) (requires-python:>3.6), version: 1.0.5
2021-05-28T09:33:56,124   Found link https://files.pythonhosted.org/packages/45/0b/867d72723c27a00cc7f330417d6f7268c777b8795bd946fc89786a0f39b0/rdkit_to_params-1.1.0.tar.gz#sha256=c182be58feb386ccb242ccfea7910d18ef6efefbf682c3ecc85088b2c053ba91 (from https://pypi.org/simple/rdkit-to-params/) (requires-python:>3.6), version: 1.1.0
2021-05-28T09:33:56,125   Found link https://files.pythonhosted.org/packages/5b/52/a15ce15be2ad2bd3606c4d9cc0055261cd7eafd098cf9a31dee9f931290a/rdkit_to_params-1.1.1.tar.gz#sha256=4b3a7e70b33bdfc7994cfad00199f794e38f6c9cf88d82ceb78eddf1f2dace9d (from https://pypi.org/simple/rdkit-to-params/) (requires-python:>3.6), version: 1.1.1
2021-05-28T09:33:56,125   Found link https://files.pythonhosted.org/packages/1d/2b/97d12fe38813b96f303f04ed4e2e77f5ee540ad683ff79a21c822c047298/rdkit_to_params-1.1.2.tar.gz#sha256=1967c3716553dd6a34ae8805adc65cbd49646ad28b9386dff094b0dd824283ba (from https://pypi.org/simple/rdkit-to-params/) (requires-python:>3.6), version: 1.1.2
2021-05-28T09:33:56,126   Found link https://files.pythonhosted.org/packages/cf/11/4a451d52b8540a19ae08f28cbec4db146f4d11760133163a94808498f433/rdkit_to_params-1.1.3.tar.gz#sha256=5cdd2f3f7f0751bd2065756ac36147254ca6d87b835828a1f7e5bad1500d7450 (from https://pypi.org/simple/rdkit-to-params/) (requires-python:>3.6), version: 1.1.3
2021-05-28T09:33:56,126   Found link https://files.pythonhosted.org/packages/1f/86/5cdd42d226f7f8dafa43fc9f891a39f8a1689648cfdf0b3653f9fea4c9e9/rdkit_to_params-1.1.4b0.tar.gz#sha256=c1b4c083274f84ff5394d17728cd409fa87418618fdf4c146c47e2947f9c7be7 (from https://pypi.org/simple/rdkit-to-params/) (requires-python:>3.6), version: 1.1.4b0
2021-05-28T09:33:56,127   Found link https://files.pythonhosted.org/packages/cd/9d/b405411dd2b049a635c2629fd62cc23a5b881bf85db16557d8bd02a85f8a/rdkit_to_params-1.1.4.tar.gz#sha256=173a7a029628cccba4ccd041b60dd8144dbc884fd9430f7ffb64a5153ad2531d (from https://pypi.org/simple/rdkit-to-params/) (requires-python:>3.6), version: 1.1.4
2021-05-28T09:33:56,127   Found link https://files.pythonhosted.org/packages/5a/ca/cc51bc1b2d9311c11316ee089825a4183e89dcecc489c1a48c19910c4acd/rdkit_to_params-1.1.5b0.tar.gz#sha256=0cf596da6296d15c9fd3725e0d77e4563c4070913c335e58e8bdf13a5857d5e5 (from https://pypi.org/simple/rdkit-to-params/) (requires-python:>3.6), version: 1.1.5b0
2021-05-28T09:33:56,128   Found link https://files.pythonhosted.org/packages/6e/7d/0ad2b20f89b42b7fb4799b474cff2000529df5b64fac11581103b293c899/rdkit_to_params-1.1.5.tar.gz#sha256=1610c7c8f44d6eb028baeebbc028cf96a3262c5f344262713820b1eb1a7d5d43 (from https://pypi.org/simple/rdkit-to-params/) (requires-python:>3.6), version: 1.1.5
2021-05-28T09:33:56,128   Found link https://files.pythonhosted.org/packages/e9/09/d2b32bb1f932169c2ab253770709574390604a0b44a5edb434823bfd9288/rdkit_to_params-1.1.6.tar.gz#sha256=637b341bc0b31ec3b26740be10630624e47145c9f10d9fa872d087052401635b (from https://pypi.org/simple/rdkit-to-params/) (requires-python:>3.6), version: 1.1.6
2021-05-28T09:33:56,129   Found link https://files.pythonhosted.org/packages/9b/40/43de495b2ef5baff0a174150f26801847d5147e810310d369d82751c8e85/rdkit_to_params-1.1.7.tar.gz#sha256=37cd4c7c940ccad422533c6a8485a111131f0c16e993c15baa71fa529e4fbc91 (from https://pypi.org/simple/rdkit-to-params/) (requires-python:>3.6), version: 1.1.7
2021-05-28T09:33:56,129 Skipping link: not a file: https://pypi.org/simple/rdkit-to-params/
2021-05-28T09:33:56,145 Given no hashes to check 1 links for project 'rdkit-to-params': discarding no candidates
2021-05-28T09:33:56,160 Collecting rdkit-to-params==1.1.7
2021-05-28T09:33:56,162   Created temporary directory: /tmp/pip-unpack-04fytrhd
2021-05-28T09:33:56,360   Downloading rdkit_to_params-1.1.7.tar.gz (43 kB)
2021-05-28T09:33:56,450   Added rdkit-to-params==1.1.7 from https://files.pythonhosted.org/packages/9b/40/43de495b2ef5baff0a174150f26801847d5147e810310d369d82751c8e85/rdkit_to_params-1.1.7.tar.gz#sha256=37cd4c7c940ccad422533c6a8485a111131f0c16e993c15baa71fa529e4fbc91 to build tracker '/tmp/pip-req-tracker-rb12kr8j'
2021-05-28T09:33:56,451     Running setup.py (path:/tmp/pip-wheel-zwwjh0co/rdkit-to-params_89d4d00fda8542c6b042996f0c6c6eba/setup.py) egg_info for package rdkit-to-params
2021-05-28T09:33:56,452     Created temporary directory: /tmp/pip-pip-egg-info-fih3c8zm
2021-05-28T09:33:56,453     Running command python setup.py egg_info
2021-05-28T09:33:57,492     running egg_info
2021-05-28T09:33:57,495     creating /tmp/pip-pip-egg-info-fih3c8zm/rdkit_to_params.egg-info
2021-05-28T09:33:57,496     writing /tmp/pip-pip-egg-info-fih3c8zm/rdkit_to_params.egg-info/PKG-INFO
2021-05-28T09:33:57,500     writing dependency_links to /tmp/pip-pip-egg-info-fih3c8zm/rdkit_to_params.egg-info/dependency_links.txt
2021-05-28T09:33:57,502     writing entry points to /tmp/pip-pip-egg-info-fih3c8zm/rdkit_to_params.egg-info/entry_points.txt
2021-05-28T09:33:57,505     writing top-level names to /tmp/pip-pip-egg-info-fih3c8zm/rdkit_to_params.egg-info/top_level.txt
2021-05-28T09:33:57,507     writing manifest file '/tmp/pip-pip-egg-info-fih3c8zm/rdkit_to_params.egg-info/SOURCES.txt'
2021-05-28T09:33:57,663     reading manifest file '/tmp/pip-pip-egg-info-fih3c8zm/rdkit_to_params.egg-info/SOURCES.txt'
2021-05-28T09:33:57,667     writing manifest file '/tmp/pip-pip-egg-info-fih3c8zm/rdkit_to_params.egg-info/SOURCES.txt'
2021-05-28T09:33:57,669     /tmp/pip-wheel-zwwjh0co/rdkit-to-params_89d4d00fda8542c6b042996f0c6c6eba/setup.py:29: UserWarning: Albeit optional, a lot of this code relies on rdkit which cannot be pip installed.To install try either conda install -c conda-forge rdkit or sudo apt-get/brew install python3-rdkit or visit rdkit documentation.
2021-05-28T09:33:57,669       'conda install -c conda-forge rdkit or ' +
2021-05-28T09:33:57,669     /tmp/pip-wheel-zwwjh0co/rdkit-to-params_89d4d00fda8542c6b042996f0c6c6eba/setup.py:33: UserWarning: The minimisation part of this code uses pyrosetta, which has to be downloaded from the Rosetta software site due to licencing. Without it only the classes Monster and Rectifier will work
2021-05-28T09:33:57,670       warn('The minimisation part of this code uses pyrosetta, which has to be downloaded from ' +
2021-05-28T09:33:57,732   Source in /tmp/pip-wheel-zwwjh0co/rdkit-to-params_89d4d00fda8542c6b042996f0c6c6eba has version 1.1.7, which satisfies requirement rdkit-to-params==1.1.7 from https://files.pythonhosted.org/packages/9b/40/43de495b2ef5baff0a174150f26801847d5147e810310d369d82751c8e85/rdkit_to_params-1.1.7.tar.gz#sha256=37cd4c7c940ccad422533c6a8485a111131f0c16e993c15baa71fa529e4fbc91
2021-05-28T09:33:57,733   Removed rdkit-to-params==1.1.7 from https://files.pythonhosted.org/packages/9b/40/43de495b2ef5baff0a174150f26801847d5147e810310d369d82751c8e85/rdkit_to_params-1.1.7.tar.gz#sha256=37cd4c7c940ccad422533c6a8485a111131f0c16e993c15baa71fa529e4fbc91 from build tracker '/tmp/pip-req-tracker-rb12kr8j'
2021-05-28T09:33:57,740 Created temporary directory: /tmp/pip-unpack-aw3g7mig
2021-05-28T09:33:57,741 Building wheels for collected packages: rdkit-to-params
2021-05-28T09:33:57,746   Created temporary directory: /tmp/pip-wheel-r25kf2rr
2021-05-28T09:33:57,747   Building wheel for rdkit-to-params (setup.py): started
2021-05-28T09:33:57,747   Destination directory: /tmp/pip-wheel-r25kf2rr
2021-05-28T09:33:57,747   Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-zwwjh0co/rdkit-to-params_89d4d00fda8542c6b042996f0c6c6eba/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-zwwjh0co/rdkit-to-params_89d4d00fda8542c6b042996f0c6c6eba/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-r25kf2rr
2021-05-28T09:33:58,586   /tmp/pip-wheel-zwwjh0co/rdkit-to-params_89d4d00fda8542c6b042996f0c6c6eba/setup.py:29: UserWarning: Albeit optional, a lot of this code relies on rdkit which cannot be pip installed.To install try either conda install -c conda-forge rdkit or sudo apt-get/brew install python3-rdkit or visit rdkit documentation.
2021-05-28T09:33:58,586     'conda install -c conda-forge rdkit or ' +
2021-05-28T09:33:58,587   /tmp/pip-wheel-zwwjh0co/rdkit-to-params_89d4d00fda8542c6b042996f0c6c6eba/setup.py:33: UserWarning: The minimisation part of this code uses pyrosetta, which has to be downloaded from the Rosetta software site due to licencing. Without it only the classes Monster and Rectifier will work
2021-05-28T09:33:58,587     warn('The minimisation part of this code uses pyrosetta, which has to be downloaded from ' +
2021-05-28T09:33:58,764   running bdist_wheel
2021-05-28T09:33:58,769   running build
2021-05-28T09:33:58,770   running build_py
2021-05-28T09:33:58,902   creating build
2021-05-28T09:33:58,902   creating build/lib
2021-05-28T09:33:58,903   creating build/lib/tests
2021-05-28T09:33:58,905   copying tests/__init__.py -> build/lib/tests
2021-05-28T09:33:58,908   creating build/lib/rdkit_to_params
2021-05-28T09:33:58,909   copying rdkit_to_params/constraint.py -> build/lib/rdkit_to_params
2021-05-28T09:33:58,912   copying rdkit_to_params/_init_mixin.py -> build/lib/rdkit_to_params
2021-05-28T09:33:58,914   copying rdkit_to_params/version.py -> build/lib/rdkit_to_params
2021-05-28T09:33:58,916   copying rdkit_to_params/_io_mixin.py -> build/lib/rdkit_to_params
2021-05-28T09:33:58,918   copying rdkit_to_params/_pyrosetta_mixin.py -> build/lib/rdkit_to_params
2021-05-28T09:33:58,921   copying rdkit_to_params/__init__.py -> build/lib/rdkit_to_params
2021-05-28T09:33:58,924   copying rdkit_to_params/entries.py -> build/lib/rdkit_to_params
2021-05-28T09:33:58,928   creating build/lib/rdkit_to_params/rdkitside
2021-05-28T09:33:58,929   copying rdkit_to_params/rdkitside/_rdkit_prep.py -> build/lib/rdkit_to_params/rdkitside
2021-05-28T09:33:58,933   copying rdkit_to_params/rdkitside/_rdkit_inits.py -> build/lib/rdkit_to_params/rdkitside
2021-05-28T09:33:58,936   copying rdkit_to_params/rdkitside/_rdkit_rename.py -> build/lib/rdkit_to_params/rdkitside
2021-05-28T09:33:58,939   copying rdkit_to_params/rdkitside/_rdkit_convert.py -> build/lib/rdkit_to_params/rdkitside
2021-05-28T09:33:58,942   copying rdkit_to_params/rdkitside/__init__.py -> build/lib/rdkit_to_params/rdkitside
2021-05-28T09:33:58,945   creating build/lib/rdkit_to_params/cli
2021-05-28T09:33:58,946   copying rdkit_to_params/cli/__init__.py -> build/lib/rdkit_to_params/cli
2021-05-28T09:33:58,955   installing to build/bdist.linux-armv7l/wheel
2021-05-28T09:33:58,956   running install
2021-05-28T09:33:58,957   running install_lib
2021-05-28T09:33:58,962   creating build/bdist.linux-armv7l
2021-05-28T09:33:58,962   creating build/bdist.linux-armv7l/wheel
2021-05-28T09:33:58,964   creating build/bdist.linux-armv7l/wheel/tests
2021-05-28T09:33:58,966   copying build/lib/tests/__init__.py -> build/bdist.linux-armv7l/wheel/tests
2021-05-28T09:33:58,969   creating build/bdist.linux-armv7l/wheel/rdkit_to_params
2021-05-28T09:33:58,970   copying build/lib/rdkit_to_params/constraint.py -> build/bdist.linux-armv7l/wheel/rdkit_to_params
2021-05-28T09:33:58,974   copying build/lib/rdkit_to_params/_init_mixin.py -> build/bdist.linux-armv7l/wheel/rdkit_to_params
2021-05-28T09:33:58,977   creating build/bdist.linux-armv7l/wheel/rdkit_to_params/rdkitside
2021-05-28T09:33:58,978   copying build/lib/rdkit_to_params/rdkitside/_rdkit_prep.py -> build/bdist.linux-armv7l/wheel/rdkit_to_params/rdkitside
2021-05-28T09:33:58,982   copying build/lib/rdkit_to_params/rdkitside/_rdkit_inits.py -> build/bdist.linux-armv7l/wheel/rdkit_to_params/rdkitside
2021-05-28T09:33:58,985   copying build/lib/rdkit_to_params/rdkitside/_rdkit_rename.py -> build/bdist.linux-armv7l/wheel/rdkit_to_params/rdkitside
2021-05-28T09:33:58,988   copying build/lib/rdkit_to_params/rdkitside/_rdkit_convert.py -> build/bdist.linux-armv7l/wheel/rdkit_to_params/rdkitside
2021-05-28T09:33:58,992   copying build/lib/rdkit_to_params/rdkitside/__init__.py -> build/bdist.linux-armv7l/wheel/rdkit_to_params/rdkitside
2021-05-28T09:33:58,994   copying build/lib/rdkit_to_params/version.py -> build/bdist.linux-armv7l/wheel/rdkit_to_params
2021-05-28T09:33:58,997   copying build/lib/rdkit_to_params/_io_mixin.py -> build/bdist.linux-armv7l/wheel/rdkit_to_params
2021-05-28T09:33:58,999   copying build/lib/rdkit_to_params/_pyrosetta_mixin.py -> build/bdist.linux-armv7l/wheel/rdkit_to_params
2021-05-28T09:33:59,003   creating build/bdist.linux-armv7l/wheel/rdkit_to_params/cli
2021-05-28T09:33:59,005   copying build/lib/rdkit_to_params/cli/__init__.py -> build/bdist.linux-armv7l/wheel/rdkit_to_params/cli
2021-05-28T09:33:59,008   copying build/lib/rdkit_to_params/__init__.py -> build/bdist.linux-armv7l/wheel/rdkit_to_params
2021-05-28T09:33:59,011   copying build/lib/rdkit_to_params/entries.py -> build/bdist.linux-armv7l/wheel/rdkit_to_params
2021-05-28T09:33:59,014   running install_egg_info
2021-05-28T09:33:59,040   running egg_info
2021-05-28T09:33:59,040   writing rdkit_to_params.egg-info/PKG-INFO
2021-05-28T09:33:59,044   writing dependency_links to rdkit_to_params.egg-info/dependency_links.txt
2021-05-28T09:33:59,046   writing entry points to rdkit_to_params.egg-info/entry_points.txt
2021-05-28T09:33:59,047   writing top-level names to rdkit_to_params.egg-info/top_level.txt
2021-05-28T09:33:59,058   reading manifest file 'rdkit_to_params.egg-info/SOURCES.txt'
2021-05-28T09:33:59,063   writing manifest file 'rdkit_to_params.egg-info/SOURCES.txt'
2021-05-28T09:33:59,065   Copying rdkit_to_params.egg-info to build/bdist.linux-armv7l/wheel/rdkit_to_params-1.1.7-py3.7.egg-info
2021-05-28T09:33:59,079   running install_scripts
2021-05-28T09:33:59,167   creating build/bdist.linux-armv7l/wheel/rdkit_to_params-1.1.7.dist-info/WHEEL
2021-05-28T09:33:59,171   creating '/tmp/pip-wheel-r25kf2rr/rdkit_to_params-1.1.7-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2021-05-28T09:33:59,176   adding 'rdkit_to_params/__init__.py'
2021-05-28T09:33:59,178   adding 'rdkit_to_params/_init_mixin.py'
2021-05-28T09:33:59,179   adding 'rdkit_to_params/_io_mixin.py'
2021-05-28T09:33:59,181   adding 'rdkit_to_params/_pyrosetta_mixin.py'
2021-05-28T09:33:59,184   adding 'rdkit_to_params/constraint.py'
2021-05-28T09:33:59,187   adding 'rdkit_to_params/entries.py'
2021-05-28T09:33:59,189   adding 'rdkit_to_params/version.py'
2021-05-28T09:33:59,191   adding 'rdkit_to_params/cli/__init__.py'
2021-05-28T09:33:59,193   adding 'rdkit_to_params/rdkitside/__init__.py'
2021-05-28T09:33:59,196   adding 'rdkit_to_params/rdkitside/_rdkit_convert.py'
2021-05-28T09:33:59,198   adding 'rdkit_to_params/rdkitside/_rdkit_inits.py'
2021-05-28T09:33:59,202   adding 'rdkit_to_params/rdkitside/_rdkit_prep.py'
2021-05-28T09:33:59,204   adding 'rdkit_to_params/rdkitside/_rdkit_rename.py'
2021-05-28T09:33:59,208   adding 'tests/__init__.py'
2021-05-28T09:33:59,210   adding 'rdkit_to_params-1.1.7.dist-info/METADATA'
2021-05-28T09:33:59,212   adding 'rdkit_to_params-1.1.7.dist-info/WHEEL'
2021-05-28T09:33:59,213   adding 'rdkit_to_params-1.1.7.dist-info/entry_points.txt'
2021-05-28T09:33:59,214   adding 'rdkit_to_params-1.1.7.dist-info/top_level.txt'
2021-05-28T09:33:59,214   adding 'rdkit_to_params-1.1.7.dist-info/RECORD'
2021-05-28T09:33:59,216   removing build/bdist.linux-armv7l/wheel
2021-05-28T09:33:59,294   Building wheel for rdkit-to-params (setup.py): finished with status 'done'
2021-05-28T09:33:59,297   Created wheel for rdkit-to-params: filename=rdkit_to_params-1.1.7-py3-none-any.whl size=43030 sha256=5b1d7ea816db4c6a55cf4afc61dcfe4302f7792cd814df425386b006ce4ea144
2021-05-28T09:33:59,297   Stored in directory: /tmp/pip-ephem-wheel-cache-bu1mtmgd/wheels/99/c0/10/d22d2f2ff3042a5f9d8c80d692bf69966f839f48e2ebf29e49
2021-05-28T09:33:59,308 Successfully built rdkit-to-params
2021-05-28T09:33:59,313 Removed build tracker: '/tmp/pip-req-tracker-rb12kr8j'