2021-05-31T17:09:02,122 Created temporary directory: /tmp/pip-ephem-wheel-cache-0cojuazu
2021-05-31T17:09:02,125 Created temporary directory: /tmp/pip-req-tracker-kfegz8uh
2021-05-31T17:09:02,126 Initialized build tracking at /tmp/pip-req-tracker-kfegz8uh
2021-05-31T17:09:02,126 Created build tracker: /tmp/pip-req-tracker-kfegz8uh
2021-05-31T17:09:02,126 Entered build tracker: /tmp/pip-req-tracker-kfegz8uh
2021-05-31T17:09:02,127 Created temporary directory: /tmp/pip-wheel-jzya9rzy
2021-05-31T17:09:02,165 1 location(s) to search for versions of ngs-tools:
2021-05-31T17:09:02,165 * https://pypi.org/simple/ngs-tools/
2021-05-31T17:09:02,166 Fetching project page and analyzing links: https://pypi.org/simple/ngs-tools/
2021-05-31T17:09:02,167 Getting page https://pypi.org/simple/ngs-tools/
2021-05-31T17:09:02,169 Found index url https://pypi.org/simple
2021-05-31T17:09:02,265   Found link https://files.pythonhosted.org/packages/58/80/e31dc09e54b773fbc2638aeafdda2296ee3673ce1e81dc6f88dfa40eb238/ngs-tools-1.1.2.tar.gz#sha256=1655e20b854e794ff6a8f519ed9e892ef24b747ad94e01ae5aa1e2c1f6de6d5d (from https://pypi.org/simple/ngs-tools/) (requires-python:>=3.6), version: 1.1.2
2021-05-31T17:09:02,266   Found link https://files.pythonhosted.org/packages/1c/e2/3677810459709bec5bd67a2947155b242d40aca25542945e0ebb9f653505/ngs-tools-1.2.0.tar.gz#sha256=6462ce10eb5bf16c779815c467a6425f85736a7d716d876410efd75de01182fe (from https://pypi.org/simple/ngs-tools/) (requires-python:>=3.6), version: 1.2.0
2021-05-31T17:09:02,267   Found link https://files.pythonhosted.org/packages/ed/df/854820831f572781cbfbd27454b2cde9f1cc964f8fb868862e3ddf9108ae/ngs-tools-1.2.1.tar.gz#sha256=793467239a91998f30015de6427b4b750e158a9a2e4b081206169c9e861eb39f (from https://pypi.org/simple/ngs-tools/) (requires-python:>=3.6), version: 1.2.1
2021-05-31T17:09:02,268   Found link https://files.pythonhosted.org/packages/40/61/ecb4bde3459dc2b2f43ce180c352c64a1583af9b4878b9256b8aecc9fc8a/ngs-tools-1.2.2.tar.gz#sha256=e20db65e63b6325da0753078b90559bacb31da316412c1f0b8c6122aa0f4e733 (from https://pypi.org/simple/ngs-tools/) (requires-python:>=3.6), version: 1.2.2
2021-05-31T17:09:02,269   Found link https://files.pythonhosted.org/packages/44/90/69de577e208acc8c11b8072d7de7f82964cb3c23f79719cc4ad1899d6097/ngs-tools-1.2.3.tar.gz#sha256=ddb6022fe8cc2e1e106702f668366fe16b27bc10fee67dfad2808b63baba26ce (from https://pypi.org/simple/ngs-tools/) (requires-python:>=3.6), version: 1.2.3
2021-05-31T17:09:02,270   Found link https://files.pythonhosted.org/packages/cb/a0/bfbf48866af8f753bfacf0c089e4872351ecb6766706df7f94fa9a94a390/ngs-tools-1.3.0.tar.gz#sha256=2afdea16253b5000e7c7fc725819067a069ce9407fda76098fe34d37a2379e74 (from https://pypi.org/simple/ngs-tools/) (requires-python:>=3.6), version: 1.3.0
2021-05-31T17:09:02,270 Skipping link: not a file: https://pypi.org/simple/ngs-tools/
2021-05-31T17:09:02,285 Given no hashes to check 1 links for project 'ngs-tools': discarding no candidates
2021-05-31T17:09:02,300 Collecting ngs-tools==1.3.0
2021-05-31T17:09:02,302   Created temporary directory: /tmp/pip-unpack-wbzxo1eg
2021-05-31T17:09:06,229   Downloading ngs-tools-1.3.0.tar.gz (51.7 MB)
2021-05-31T17:09:12,765   Added ngs-tools==1.3.0 from https://files.pythonhosted.org/packages/cb/a0/bfbf48866af8f753bfacf0c089e4872351ecb6766706df7f94fa9a94a390/ngs-tools-1.3.0.tar.gz#sha256=2afdea16253b5000e7c7fc725819067a069ce9407fda76098fe34d37a2379e74 to build tracker '/tmp/pip-req-tracker-kfegz8uh'
2021-05-31T17:09:12,766     Running setup.py (path:/tmp/pip-wheel-jzya9rzy/ngs-tools_deb7c9798de14733bd9ea1a424af797e/setup.py) egg_info for package ngs-tools
2021-05-31T17:09:12,767     Created temporary directory: /tmp/pip-pip-egg-info-fa6i2qhy
2021-05-31T17:09:12,767     Running command python setup.py egg_info
2021-05-31T17:09:13,834     running egg_info
2021-05-31T17:09:13,837     creating /tmp/pip-pip-egg-info-fa6i2qhy/ngs_tools.egg-info
2021-05-31T17:09:13,839     writing /tmp/pip-pip-egg-info-fa6i2qhy/ngs_tools.egg-info/PKG-INFO
2021-05-31T17:09:13,842     writing dependency_links to /tmp/pip-pip-egg-info-fa6i2qhy/ngs_tools.egg-info/dependency_links.txt
2021-05-31T17:09:13,845     writing requirements to /tmp/pip-pip-egg-info-fa6i2qhy/ngs_tools.egg-info/requires.txt
2021-05-31T17:09:13,846     writing top-level names to /tmp/pip-pip-egg-info-fa6i2qhy/ngs_tools.egg-info/top_level.txt
2021-05-31T17:09:13,848     writing manifest file '/tmp/pip-pip-egg-info-fa6i2qhy/ngs_tools.egg-info/SOURCES.txt'
2021-05-31T17:09:13,999     adding license file 'LICENSE' (matched pattern 'LICEN[CS]E*')
2021-05-31T17:09:14,002     reading manifest file '/tmp/pip-pip-egg-info-fa6i2qhy/ngs_tools.egg-info/SOURCES.txt'
2021-05-31T17:09:14,004     reading manifest template 'MANIFEST.in'
2021-05-31T17:09:14,014     writing manifest file '/tmp/pip-pip-egg-info-fa6i2qhy/ngs_tools.egg-info/SOURCES.txt'
2021-05-31T17:09:14,077   Source in /tmp/pip-wheel-jzya9rzy/ngs-tools_deb7c9798de14733bd9ea1a424af797e has version 1.3.0, which satisfies requirement ngs-tools==1.3.0 from https://files.pythonhosted.org/packages/cb/a0/bfbf48866af8f753bfacf0c089e4872351ecb6766706df7f94fa9a94a390/ngs-tools-1.3.0.tar.gz#sha256=2afdea16253b5000e7c7fc725819067a069ce9407fda76098fe34d37a2379e74
2021-05-31T17:09:14,078   Removed ngs-tools==1.3.0 from https://files.pythonhosted.org/packages/cb/a0/bfbf48866af8f753bfacf0c089e4872351ecb6766706df7f94fa9a94a390/ngs-tools-1.3.0.tar.gz#sha256=2afdea16253b5000e7c7fc725819067a069ce9407fda76098fe34d37a2379e74 from build tracker '/tmp/pip-req-tracker-kfegz8uh'
2021-05-31T17:09:14,084 Created temporary directory: /tmp/pip-unpack-oe0i6p12
2021-05-31T17:09:14,085 Building wheels for collected packages: ngs-tools
2021-05-31T17:09:14,090   Created temporary directory: /tmp/pip-wheel-8nk_h5fx
2021-05-31T17:09:14,090   Building wheel for ngs-tools (setup.py): started
2021-05-31T17:09:14,090   Destination directory: /tmp/pip-wheel-8nk_h5fx
2021-05-31T17:09:14,091   Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-jzya9rzy/ngs-tools_deb7c9798de14733bd9ea1a424af797e/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-jzya9rzy/ngs-tools_deb7c9798de14733bd9ea1a424af797e/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-8nk_h5fx
2021-05-31T17:09:15,138   running bdist_wheel
2021-05-31T17:09:15,143   running build
2021-05-31T17:09:15,143   running build_py
2021-05-31T17:09:15,280   creating build
2021-05-31T17:09:15,281   creating build/lib
2021-05-31T17:09:15,282   creating build/lib/ngs_tools
2021-05-31T17:09:15,283   copying ngs_tools/utils.py -> build/lib/ngs_tools
2021-05-31T17:09:15,286   copying ngs_tools/__init__.py -> build/lib/ngs_tools
2021-05-31T17:09:15,288   copying ngs_tools/logging.py -> build/lib/ngs_tools
2021-05-31T17:09:15,290   copying ngs_tools/sequence.py -> build/lib/ngs_tools
2021-05-31T17:09:15,293   copying ngs_tools/bam.py -> build/lib/ngs_tools
2021-05-31T17:09:15,296   creating build/lib/ngs_tools/chemistry
2021-05-31T17:09:15,297   copying ngs_tools/chemistry/Chemistry.py -> build/lib/ngs_tools/chemistry
2021-05-31T17:09:15,300   copying ngs_tools/chemistry/__init__.py -> build/lib/ngs_tools/chemistry
2021-05-31T17:09:15,302   copying ngs_tools/chemistry/SingleCellChemistry.py -> build/lib/ngs_tools/chemistry
2021-05-31T17:09:15,305   copying ngs_tools/chemistry/SpatialChemistry.py -> build/lib/ngs_tools/chemistry
2021-05-31T17:09:15,308   creating build/lib/ngs_tools/fasta
2021-05-31T17:09:15,309   copying ngs_tools/fasta/__init__.py -> build/lib/ngs_tools/fasta
2021-05-31T17:09:15,312   copying ngs_tools/fasta/Fasta.py -> build/lib/ngs_tools/fasta
2021-05-31T17:09:15,314   copying ngs_tools/fasta/FastaEntry.py -> build/lib/ngs_tools/fasta
2021-05-31T17:09:15,317   creating build/lib/ngs_tools/fastq
2021-05-31T17:09:15,318   copying ngs_tools/fastq/__init__.py -> build/lib/ngs_tools/fastq
2021-05-31T17:09:15,320   copying ngs_tools/fastq/Read.py -> build/lib/ngs_tools/fastq
2021-05-31T17:09:15,323   copying ngs_tools/fastq/Fastq.py -> build/lib/ngs_tools/fastq
2021-05-31T17:09:15,326   creating build/lib/ngs_tools/gtf
2021-05-31T17:09:15,327   copying ngs_tools/gtf/__init__.py -> build/lib/ngs_tools/gtf
2021-05-31T17:09:15,329   copying ngs_tools/gtf/Segment.py -> build/lib/ngs_tools/gtf
2021-05-31T17:09:15,332   copying ngs_tools/gtf/Gtf.py -> build/lib/ngs_tools/gtf
2021-05-31T17:09:15,334   copying ngs_tools/gtf/SegmentCollection.py -> build/lib/ngs_tools/gtf
2021-05-31T17:09:15,337   copying ngs_tools/gtf/GtfEntry.py -> build/lib/ngs_tools/gtf
2021-05-31T17:09:15,339   running egg_info
2021-05-31T17:09:15,354   writing ngs_tools.egg-info/PKG-INFO
2021-05-31T17:09:15,356   writing dependency_links to ngs_tools.egg-info/dependency_links.txt
2021-05-31T17:09:15,358   writing requirements to ngs_tools.egg-info/requires.txt
2021-05-31T17:09:15,360   writing top-level names to ngs_tools.egg-info/top_level.txt
2021-05-31T17:09:15,368   adding license file 'LICENSE' (matched pattern 'LICEN[CS]E*')
2021-05-31T17:09:15,371   reading manifest file 'ngs_tools.egg-info/SOURCES.txt'
2021-05-31T17:09:15,376   reading manifest template 'MANIFEST.in'
2021-05-31T17:09:15,386   writing manifest file 'ngs_tools.egg-info/SOURCES.txt'
2021-05-31T17:09:15,390   creating build/lib/ngs_tools/chemistry/whitelists
2021-05-31T17:09:15,391   copying ngs_tools/chemistry/whitelists/10x_version1_whitelist.txt.gz -> build/lib/ngs_tools/chemistry/whitelists
2021-05-31T17:09:15,436   copying ngs_tools/chemistry/whitelists/10x_version2_whitelist.txt.gz -> build/lib/ngs_tools/chemistry/whitelists
2021-05-31T17:09:15,483   copying ngs_tools/chemistry/whitelists/10x_version3_feature_map.txt.gz -> build/lib/ngs_tools/chemistry/whitelists
2021-05-31T17:09:16,105   copying ngs_tools/chemistry/whitelists/10x_version3_whitelist.txt.gz -> build/lib/ngs_tools/chemistry/whitelists
2021-05-31T17:09:16,479   copying ngs_tools/chemistry/whitelists/indrops_version3_whitelist.txt.gz -> build/lib/ngs_tools/chemistry/whitelists
2021-05-31T17:09:16,491   copying ngs_tools/chemistry/whitelists/sci_fate_whitelist.txt.gz -> build/lib/ngs_tools/chemistry/whitelists
2021-05-31T17:09:16,500   installing to build/bdist.linux-armv7l/wheel
2021-05-31T17:09:16,501   running install
2021-05-31T17:09:16,502   running install_lib
2021-05-31T17:09:16,506   creating build/bdist.linux-armv7l
2021-05-31T17:09:16,507   creating build/bdist.linux-armv7l/wheel
2021-05-31T17:09:16,510   creating build/bdist.linux-armv7l/wheel/ngs_tools
2021-05-31T17:09:16,511   copying build/lib/ngs_tools/utils.py -> build/bdist.linux-armv7l/wheel/ngs_tools
2021-05-31T17:09:16,515   copying build/lib/ngs_tools/__init__.py -> build/bdist.linux-armv7l/wheel/ngs_tools
2021-05-31T17:09:16,518   copying build/lib/ngs_tools/logging.py -> build/bdist.linux-armv7l/wheel/ngs_tools
2021-05-31T17:09:16,521   creating build/bdist.linux-armv7l/wheel/ngs_tools/chemistry
2021-05-31T17:09:16,523   copying build/lib/ngs_tools/chemistry/Chemistry.py -> build/bdist.linux-armv7l/wheel/ngs_tools/chemistry
2021-05-31T17:09:16,527   copying build/lib/ngs_tools/chemistry/__init__.py -> build/bdist.linux-armv7l/wheel/ngs_tools/chemistry
2021-05-31T17:09:16,530   copying build/lib/ngs_tools/chemistry/SingleCellChemistry.py -> build/bdist.linux-armv7l/wheel/ngs_tools/chemistry
2021-05-31T17:09:16,534   creating build/bdist.linux-armv7l/wheel/ngs_tools/chemistry/whitelists
2021-05-31T17:09:16,536   copying build/lib/ngs_tools/chemistry/whitelists/indrops_version3_whitelist.txt.gz -> build/bdist.linux-armv7l/wheel/ngs_tools/chemistry/whitelists
2021-05-31T17:09:16,551   copying build/lib/ngs_tools/chemistry/whitelists/sci_fate_whitelist.txt.gz -> build/bdist.linux-armv7l/wheel/ngs_tools/chemistry/whitelists
2021-05-31T17:09:16,554   copying build/lib/ngs_tools/chemistry/whitelists/10x_version3_whitelist.txt.gz -> build/bdist.linux-armv7l/wheel/ngs_tools/chemistry/whitelists
2021-05-31T17:09:16,968   copying build/lib/ngs_tools/chemistry/whitelists/10x_version1_whitelist.txt.gz -> build/bdist.linux-armv7l/wheel/ngs_tools/chemistry/whitelists
2021-05-31T17:09:17,011   copying build/lib/ngs_tools/chemistry/whitelists/10x_version3_feature_map.txt.gz -> build/bdist.linux-armv7l/wheel/ngs_tools/chemistry/whitelists
2021-05-31T17:09:17,634   copying build/lib/ngs_tools/chemistry/whitelists/10x_version2_whitelist.txt.gz -> build/bdist.linux-armv7l/wheel/ngs_tools/chemistry/whitelists
2021-05-31T17:09:17,694   copying build/lib/ngs_tools/chemistry/SpatialChemistry.py -> build/bdist.linux-armv7l/wheel/ngs_tools/chemistry
2021-05-31T17:09:17,697   creating build/bdist.linux-armv7l/wheel/ngs_tools/fasta
2021-05-31T17:09:17,698   copying build/lib/ngs_tools/fasta/__init__.py -> build/bdist.linux-armv7l/wheel/ngs_tools/fasta
2021-05-31T17:09:17,701   copying build/lib/ngs_tools/fasta/Fasta.py -> build/bdist.linux-armv7l/wheel/ngs_tools/fasta
2021-05-31T17:09:17,704   copying build/lib/ngs_tools/fasta/FastaEntry.py -> build/bdist.linux-armv7l/wheel/ngs_tools/fasta
2021-05-31T17:09:17,706   copying build/lib/ngs_tools/sequence.py -> build/bdist.linux-armv7l/wheel/ngs_tools
2021-05-31T17:09:17,710   copying build/lib/ngs_tools/bam.py -> build/bdist.linux-armv7l/wheel/ngs_tools
2021-05-31T17:09:17,714   creating build/bdist.linux-armv7l/wheel/ngs_tools/fastq
2021-05-31T17:09:17,715   copying build/lib/ngs_tools/fastq/__init__.py -> build/bdist.linux-armv7l/wheel/ngs_tools/fastq
2021-05-31T17:09:17,717   copying build/lib/ngs_tools/fastq/Read.py -> build/bdist.linux-armv7l/wheel/ngs_tools/fastq
2021-05-31T17:09:17,720   copying build/lib/ngs_tools/fastq/Fastq.py -> build/bdist.linux-armv7l/wheel/ngs_tools/fastq
2021-05-31T17:09:17,723   creating build/bdist.linux-armv7l/wheel/ngs_tools/gtf
2021-05-31T17:09:17,724   copying build/lib/ngs_tools/gtf/__init__.py -> build/bdist.linux-armv7l/wheel/ngs_tools/gtf
2021-05-31T17:09:17,727   copying build/lib/ngs_tools/gtf/Segment.py -> build/bdist.linux-armv7l/wheel/ngs_tools/gtf
2021-05-31T17:09:17,730   copying build/lib/ngs_tools/gtf/Gtf.py -> build/bdist.linux-armv7l/wheel/ngs_tools/gtf
2021-05-31T17:09:17,732   copying build/lib/ngs_tools/gtf/SegmentCollection.py -> build/bdist.linux-armv7l/wheel/ngs_tools/gtf
2021-05-31T17:09:17,735   copying build/lib/ngs_tools/gtf/GtfEntry.py -> build/bdist.linux-armv7l/wheel/ngs_tools/gtf
2021-05-31T17:09:17,737   running install_egg_info
2021-05-31T17:09:17,747   Copying ngs_tools.egg-info to build/bdist.linux-armv7l/wheel/ngs_tools-1.3.0-py3.7.egg-info
2021-05-31T17:09:17,763   running install_scripts
2021-05-31T17:09:17,848   adding license file "LICENSE" (matched pattern "LICEN[CS]E*")
2021-05-31T17:09:17,853   creating build/bdist.linux-armv7l/wheel/ngs_tools-1.3.0.dist-info/WHEEL
2021-05-31T17:09:17,856   creating '/tmp/pip-wheel-8nk_h5fx/ngs_tools-1.3.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2021-05-31T17:09:17,858   adding 'ngs_tools/__init__.py'
2021-05-31T17:09:17,860   adding 'ngs_tools/bam.py'
2021-05-31T17:09:17,862   adding 'ngs_tools/logging.py'
2021-05-31T17:09:17,865   adding 'ngs_tools/sequence.py'
2021-05-31T17:09:17,868   adding 'ngs_tools/utils.py'
2021-05-31T17:09:17,872   adding 'ngs_tools/chemistry/Chemistry.py'
2021-05-31T17:09:17,874   adding 'ngs_tools/chemistry/SingleCellChemistry.py'
2021-05-31T17:09:17,875   adding 'ngs_tools/chemistry/SpatialChemistry.py'
2021-05-31T17:09:17,876   adding 'ngs_tools/chemistry/__init__.py'
2021-05-31T17:09:18,134   adding 'ngs_tools/chemistry/whitelists/10x_version1_whitelist.txt.gz'
2021-05-31T17:09:18,415   adding 'ngs_tools/chemistry/whitelists/10x_version2_whitelist.txt.gz'
2021-05-31T17:09:22,823   adding 'ngs_tools/chemistry/whitelists/10x_version3_feature_map.txt.gz'
2021-05-31T17:09:25,263   adding 'ngs_tools/chemistry/whitelists/10x_version3_whitelist.txt.gz'
2021-05-31T17:09:25,443   adding 'ngs_tools/chemistry/whitelists/indrops_version3_whitelist.txt.gz'
2021-05-31T17:09:25,448   adding 'ngs_tools/chemistry/whitelists/sci_fate_whitelist.txt.gz'
2021-05-31T17:09:25,450   adding 'ngs_tools/fasta/Fasta.py'
2021-05-31T17:09:25,451   adding 'ngs_tools/fasta/FastaEntry.py'
2021-05-31T17:09:25,453   adding 'ngs_tools/fasta/__init__.py'
2021-05-31T17:09:25,455   adding 'ngs_tools/fastq/Fastq.py'
2021-05-31T17:09:25,456   adding 'ngs_tools/fastq/Read.py'
2021-05-31T17:09:25,458   adding 'ngs_tools/fastq/__init__.py'
2021-05-31T17:09:25,460   adding 'ngs_tools/gtf/Gtf.py'
2021-05-31T17:09:25,461   adding 'ngs_tools/gtf/GtfEntry.py'
2021-05-31T17:09:25,463   adding 'ngs_tools/gtf/Segment.py'
2021-05-31T17:09:25,465   adding 'ngs_tools/gtf/SegmentCollection.py'
2021-05-31T17:09:25,467   adding 'ngs_tools/gtf/__init__.py'
2021-05-31T17:09:25,469   adding 'ngs_tools-1.3.0.dist-info/LICENSE'
2021-05-31T17:09:25,470   adding 'ngs_tools-1.3.0.dist-info/METADATA'
2021-05-31T17:09:25,471   adding 'ngs_tools-1.3.0.dist-info/WHEEL'
2021-05-31T17:09:25,472   adding 'ngs_tools-1.3.0.dist-info/top_level.txt'
2021-05-31T17:09:25,473   adding 'ngs_tools-1.3.0.dist-info/RECORD'
2021-05-31T17:09:26,212   removing build/bdist.linux-armv7l/wheel
2021-05-31T17:09:26,333   Building wheel for ngs-tools (setup.py): finished with status 'done'
2021-05-31T17:09:26,873   Created wheel for ngs-tools: filename=ngs_tools-1.3.0-py3-none-any.whl size=51704171 sha256=637c180e653c8cc118967d5fffe8c5e5c72db0681df97b983f940d465d59e7a0
2021-05-31T17:09:26,873   Stored in directory: /tmp/pip-ephem-wheel-cache-0cojuazu/wheels/e4/a6/5a/382504c923d9fe611e6b19817a9042c47cdbc40fa5a4d1e321
2021-05-31T17:09:26,909 Successfully built ngs-tools
2021-05-31T17:09:28,372 Removed build tracker: '/tmp/pip-req-tracker-kfegz8uh'