2021-06-02T08:06:45,962 Created temporary directory: /tmp/pip-ephem-wheel-cache-6txungrz 2021-06-02T08:06:45,965 Created temporary directory: /tmp/pip-req-tracker-fq01i52y 2021-06-02T08:06:45,966 Initialized build tracking at /tmp/pip-req-tracker-fq01i52y 2021-06-02T08:06:45,966 Created build tracker: /tmp/pip-req-tracker-fq01i52y 2021-06-02T08:06:45,966 Entered build tracker: /tmp/pip-req-tracker-fq01i52y 2021-06-02T08:06:45,967 Created temporary directory: /tmp/pip-wheel-18yeou3o 2021-06-02T08:06:46,005 1 location(s) to search for versions of stereopy: 2021-06-02T08:06:46,005 * https://pypi.org/simple/stereopy/ 2021-06-02T08:06:46,006 Fetching project page and analyzing links: https://pypi.org/simple/stereopy/ 2021-06-02T08:06:46,007 Getting page https://pypi.org/simple/stereopy/ 2021-06-02T08:06:46,009 Found index url https://pypi.org/simple 2021-06-02T08:06:46,098 Found link https://files.pythonhosted.org/packages/ba/e8/211af80a80404175bc1fd16031e19187a8f9f30bbbf83ef798b805bcbfa8/stereopy-0.1.tar.gz#sha256=618b0c895b568f307841c4b6e95448eb73cc56ad5df3b5aff48261dc8a4eb24b (from https://pypi.org/simple/stereopy/) (requires-python:>=3.6), version: 0.1 2021-06-02T08:06:46,098 Skipping link: not a file: https://pypi.org/simple/stereopy/ 2021-06-02T08:06:46,112 Given no hashes to check 1 links for project 'stereopy': discarding no candidates 2021-06-02T08:06:46,126 Collecting stereopy==0.1 2021-06-02T08:06:46,128 Created temporary directory: /tmp/pip-unpack-b0vpa7s_ 2021-06-02T08:06:47,791 Downloading stereopy-0.1.tar.gz (6.3 MB) 2021-06-02T08:06:48,900 Added stereopy==0.1 from https://files.pythonhosted.org/packages/ba/e8/211af80a80404175bc1fd16031e19187a8f9f30bbbf83ef798b805bcbfa8/stereopy-0.1.tar.gz#sha256=618b0c895b568f307841c4b6e95448eb73cc56ad5df3b5aff48261dc8a4eb24b to build tracker '/tmp/pip-req-tracker-fq01i52y' 2021-06-02T08:06:48,901 Running setup.py (path:/tmp/pip-wheel-18yeou3o/stereopy_64d71476328842bdaccd792da494f84e/setup.py) egg_info for package stereopy 2021-06-02T08:06:48,902 Created temporary directory: /tmp/pip-pip-egg-info-rnqq4kvu 2021-06-02T08:06:48,902 Running command python setup.py egg_info 2021-06-02T08:06:53,288 running egg_info 2021-06-02T08:06:53,290 creating /tmp/pip-pip-egg-info-rnqq4kvu/stereopy.egg-info 2021-06-02T08:06:53,291 writing /tmp/pip-pip-egg-info-rnqq4kvu/stereopy.egg-info/PKG-INFO 2021-06-02T08:06:53,294 writing dependency_links to /tmp/pip-pip-egg-info-rnqq4kvu/stereopy.egg-info/dependency_links.txt 2021-06-02T08:06:53,296 writing requirements to /tmp/pip-pip-egg-info-rnqq4kvu/stereopy.egg-info/requires.txt 2021-06-02T08:06:53,297 writing top-level names to /tmp/pip-pip-egg-info-rnqq4kvu/stereopy.egg-info/top_level.txt 2021-06-02T08:06:53,299 writing manifest file '/tmp/pip-pip-egg-info-rnqq4kvu/stereopy.egg-info/SOURCES.txt' 2021-06-02T08:06:53,455 adding license file 'LICENSE' (matched pattern 'LICEN[CS]E*') 2021-06-02T08:06:53,506 reading manifest file '/tmp/pip-pip-egg-info-rnqq4kvu/stereopy.egg-info/SOURCES.txt' 2021-06-02T08:06:53,515 writing manifest file '/tmp/pip-pip-egg-info-rnqq4kvu/stereopy.egg-info/SOURCES.txt' 2021-06-02T08:06:53,591 Source in /tmp/pip-wheel-18yeou3o/stereopy_64d71476328842bdaccd792da494f84e has version 0.1, which satisfies requirement stereopy==0.1 from https://files.pythonhosted.org/packages/ba/e8/211af80a80404175bc1fd16031e19187a8f9f30bbbf83ef798b805bcbfa8/stereopy-0.1.tar.gz#sha256=618b0c895b568f307841c4b6e95448eb73cc56ad5df3b5aff48261dc8a4eb24b 2021-06-02T08:06:53,592 Removed stereopy==0.1 from https://files.pythonhosted.org/packages/ba/e8/211af80a80404175bc1fd16031e19187a8f9f30bbbf83ef798b805bcbfa8/stereopy-0.1.tar.gz#sha256=618b0c895b568f307841c4b6e95448eb73cc56ad5df3b5aff48261dc8a4eb24b from build tracker '/tmp/pip-req-tracker-fq01i52y' 2021-06-02T08:06:53,598 Created temporary directory: /tmp/pip-unpack-faqceg4b 2021-06-02T08:06:53,599 Building wheels for collected packages: stereopy 2021-06-02T08:06:53,603 Created temporary directory: /tmp/pip-wheel-5l5mr7qf 2021-06-02T08:06:53,604 Building wheel for stereopy (setup.py): started 2021-06-02T08:06:53,604 Destination directory: /tmp/pip-wheel-5l5mr7qf 2021-06-02T08:06:53,604 Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-18yeou3o/stereopy_64d71476328842bdaccd792da494f84e/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-18yeou3o/stereopy_64d71476328842bdaccd792da494f84e/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-5l5mr7qf 2021-06-02T08:06:55,428 running bdist_wheel 2021-06-02T08:06:55,433 running build 2021-06-02T08:06:55,434 running build_py 2021-06-02T08:06:55,560 creating build 2021-06-02T08:06:55,561 creating build/lib 2021-06-02T08:06:55,561 creating build/lib/stereo 2021-06-02T08:06:55,563 copying stereo/__init__.py -> build/lib/stereo 2021-06-02T08:06:55,565 copying stereo/config.py -> build/lib/stereo 2021-06-02T08:06:55,567 copying stereo/log_manager.py -> build/lib/stereo 2021-06-02T08:06:55,570 creating build/lib/stereo/io 2021-06-02T08:06:55,571 copying stereo/io/__init__.py -> build/lib/stereo/io 2021-06-02T08:06:55,573 copying stereo/io/reader.py -> build/lib/stereo/io 2021-06-02T08:06:55,576 creating build/lib/stereo/tools 2021-06-02T08:06:55,577 copying stereo/tools/cell_type_anno.py -> build/lib/stereo/tools 2021-06-02T08:06:55,579 copying stereo/tools/__init__.py -> build/lib/stereo/tools 2021-06-02T08:06:55,581 copying stereo/tools/find_markers.py -> build/lib/stereo/tools 2021-06-02T08:06:55,583 copying stereo/tools/dim_reduce.py -> build/lib/stereo/tools 2021-06-02T08:06:55,586 copying stereo/tools/spatial_pattern_score.py -> build/lib/stereo/tools 2021-06-02T08:06:55,588 copying stereo/tools/spatial_lag.py -> build/lib/stereo/tools 2021-06-02T08:06:55,590 copying stereo/tools/clustering.py -> build/lib/stereo/tools 2021-06-02T08:06:55,593 copying stereo/tools/neighbors.py -> build/lib/stereo/tools 2021-06-02T08:06:55,596 creating build/lib/stereo/preprocess 2021-06-02T08:06:55,597 copying stereo/preprocess/__init__.py -> build/lib/stereo/preprocess 2021-06-02T08:06:55,599 copying stereo/preprocess/qc.py -> build/lib/stereo/preprocess 2021-06-02T08:06:55,601 copying stereo/preprocess/normalize.py -> build/lib/stereo/preprocess 2021-06-02T08:06:55,603 copying stereo/preprocess/sc_transform.py -> build/lib/stereo/preprocess 2021-06-02T08:06:55,606 copying stereo/preprocess/filter.py -> build/lib/stereo/preprocess 2021-06-02T08:06:55,609 creating build/lib/stereo/core 2021-06-02T08:06:55,610 copying stereo/core/__init__.py -> build/lib/stereo/core 2021-06-02T08:06:55,612 copying stereo/core/tool_base.py -> build/lib/stereo/core 2021-06-02T08:06:55,614 copying stereo/core/stereo_result.py -> build/lib/stereo/core 2021-06-02T08:06:55,617 copying stereo/core/stereo_data.py -> build/lib/stereo/core 2021-06-02T08:06:55,620 creating build/lib/stereo/plots 2021-06-02T08:06:55,620 copying stereo/plots/__init__.py -> build/lib/stereo/plots 2021-06-02T08:06:55,623 copying stereo/plots/dim_reduce.py -> build/lib/stereo/plots 2021-06-02T08:06:55,625 copying stereo/plots/qc.py -> build/lib/stereo/plots 2021-06-02T08:06:55,627 copying stereo/plots/plot_utils.py -> build/lib/stereo/plots 2021-06-02T08:06:55,630 copying stereo/plots/_params_doc.py -> build/lib/stereo/plots 2021-06-02T08:06:55,632 copying stereo/plots/clustering.py -> build/lib/stereo/plots 2021-06-02T08:06:55,634 copying stereo/plots/scatter.py -> build/lib/stereo/plots 2021-06-02T08:06:55,637 copying stereo/plots/marker_genes.py -> build/lib/stereo/plots 2021-06-02T08:06:55,640 creating build/lib/stereo/utils 2021-06-02T08:06:55,641 copying stereo/utils/correlation.py -> build/lib/stereo/utils 2021-06-02T08:06:55,643 copying stereo/utils/__init__.py -> build/lib/stereo/utils 2021-06-02T08:06:55,645 copying stereo/utils/data_helper.py -> build/lib/stereo/utils 2021-06-02T08:06:55,648 creating build/lib/stereo/plots/_plot_basic 2021-06-02T08:06:55,649 copying stereo/plots/_plot_basic/__init__.py -> build/lib/stereo/plots/_plot_basic 2021-06-02T08:06:55,651 copying stereo/plots/_plot_basic/get_stereo_data.py -> build/lib/stereo/plots/_plot_basic 2021-06-02T08:06:55,654 copying stereo/plots/_plot_basic/scatter_plt.py -> build/lib/stereo/plots/_plot_basic 2021-06-02T08:06:55,656 copying stereo/plots/_plot_basic/heatmap_plt.py -> build/lib/stereo/plots/_plot_basic 2021-06-02T08:06:55,658 running egg_info 2021-06-02T08:06:55,661 writing stereopy.egg-info/PKG-INFO 2021-06-02T08:06:55,663 writing dependency_links to stereopy.egg-info/dependency_links.txt 2021-06-02T08:06:55,665 writing requirements to stereopy.egg-info/requires.txt 2021-06-02T08:06:55,667 writing top-level names to stereopy.egg-info/top_level.txt 2021-06-02T08:06:55,678 adding license file 'LICENSE' (matched pattern 'LICEN[CS]E*') 2021-06-02T08:06:55,711 reading manifest file 'stereopy.egg-info/SOURCES.txt' 2021-06-02T08:06:55,737 writing manifest file 'stereopy.egg-info/SOURCES.txt' 2021-06-02T08:06:55,751 installing to build/bdist.linux-armv7l/wheel 2021-06-02T08:06:55,751 running install 2021-06-02T08:06:55,752 running install_lib 2021-06-02T08:06:55,757 creating build/bdist.linux-armv7l 2021-06-02T08:06:55,758 creating build/bdist.linux-armv7l/wheel 2021-06-02T08:06:55,760 creating build/bdist.linux-armv7l/wheel/stereo 2021-06-02T08:06:55,762 creating build/bdist.linux-armv7l/wheel/stereo/io 2021-06-02T08:06:55,763 copying build/lib/stereo/io/__init__.py -> build/bdist.linux-armv7l/wheel/stereo/io 2021-06-02T08:06:55,765 copying build/lib/stereo/io/reader.py -> build/bdist.linux-armv7l/wheel/stereo/io 2021-06-02T08:06:55,768 copying build/lib/stereo/__init__.py -> build/bdist.linux-armv7l/wheel/stereo 2021-06-02T08:06:55,770 copying build/lib/stereo/config.py -> build/bdist.linux-armv7l/wheel/stereo 2021-06-02T08:06:55,773 creating build/bdist.linux-armv7l/wheel/stereo/tools 2021-06-02T08:06:55,774 copying build/lib/stereo/tools/cell_type_anno.py -> build/bdist.linux-armv7l/wheel/stereo/tools 2021-06-02T08:06:55,777 copying build/lib/stereo/tools/__init__.py -> build/bdist.linux-armv7l/wheel/stereo/tools 2021-06-02T08:06:55,780 copying build/lib/stereo/tools/find_markers.py -> build/bdist.linux-armv7l/wheel/stereo/tools 2021-06-02T08:06:55,783 copying build/lib/stereo/tools/dim_reduce.py -> build/bdist.linux-armv7l/wheel/stereo/tools 2021-06-02T08:06:55,786 copying build/lib/stereo/tools/spatial_pattern_score.py -> build/bdist.linux-armv7l/wheel/stereo/tools 2021-06-02T08:06:55,788 copying build/lib/stereo/tools/spatial_lag.py -> build/bdist.linux-armv7l/wheel/stereo/tools 2021-06-02T08:06:55,791 copying build/lib/stereo/tools/clustering.py -> build/bdist.linux-armv7l/wheel/stereo/tools 2021-06-02T08:06:55,794 copying build/lib/stereo/tools/neighbors.py -> build/bdist.linux-armv7l/wheel/stereo/tools 2021-06-02T08:06:55,797 creating build/bdist.linux-armv7l/wheel/stereo/preprocess 2021-06-02T08:06:55,799 copying build/lib/stereo/preprocess/__init__.py -> build/bdist.linux-armv7l/wheel/stereo/preprocess 2021-06-02T08:06:55,801 copying build/lib/stereo/preprocess/qc.py -> build/bdist.linux-armv7l/wheel/stereo/preprocess 2021-06-02T08:06:55,804 copying build/lib/stereo/preprocess/normalize.py -> build/bdist.linux-armv7l/wheel/stereo/preprocess 2021-06-02T08:06:55,807 copying build/lib/stereo/preprocess/sc_transform.py -> build/bdist.linux-armv7l/wheel/stereo/preprocess 2021-06-02T08:06:55,810 copying build/lib/stereo/preprocess/filter.py -> build/bdist.linux-armv7l/wheel/stereo/preprocess 2021-06-02T08:06:55,814 creating build/bdist.linux-armv7l/wheel/stereo/core 2021-06-02T08:06:55,815 copying build/lib/stereo/core/__init__.py -> build/bdist.linux-armv7l/wheel/stereo/core 2021-06-02T08:06:55,818 copying build/lib/stereo/core/tool_base.py -> build/bdist.linux-armv7l/wheel/stereo/core 2021-06-02T08:06:55,820 copying build/lib/stereo/core/stereo_result.py -> build/bdist.linux-armv7l/wheel/stereo/core 2021-06-02T08:06:55,823 copying build/lib/stereo/core/stereo_data.py -> build/bdist.linux-armv7l/wheel/stereo/core 2021-06-02T08:06:55,826 copying build/lib/stereo/log_manager.py -> build/bdist.linux-armv7l/wheel/stereo 2021-06-02T08:06:55,829 creating build/bdist.linux-armv7l/wheel/stereo/plots 2021-06-02T08:06:55,830 copying build/lib/stereo/plots/__init__.py -> build/bdist.linux-armv7l/wheel/stereo/plots 2021-06-02T08:06:55,833 copying build/lib/stereo/plots/dim_reduce.py -> build/bdist.linux-armv7l/wheel/stereo/plots 2021-06-02T08:06:55,835 copying build/lib/stereo/plots/qc.py -> build/bdist.linux-armv7l/wheel/stereo/plots 2021-06-02T08:06:55,839 creating build/bdist.linux-armv7l/wheel/stereo/plots/_plot_basic 2021-06-02T08:06:55,840 copying build/lib/stereo/plots/_plot_basic/__init__.py -> build/bdist.linux-armv7l/wheel/stereo/plots/_plot_basic 2021-06-02T08:06:55,843 copying build/lib/stereo/plots/_plot_basic/get_stereo_data.py -> build/bdist.linux-armv7l/wheel/stereo/plots/_plot_basic 2021-06-02T08:06:55,845 copying build/lib/stereo/plots/_plot_basic/scatter_plt.py -> build/bdist.linux-armv7l/wheel/stereo/plots/_plot_basic 2021-06-02T08:06:55,848 copying build/lib/stereo/plots/_plot_basic/heatmap_plt.py -> build/bdist.linux-armv7l/wheel/stereo/plots/_plot_basic 2021-06-02T08:06:55,851 copying build/lib/stereo/plots/plot_utils.py -> build/bdist.linux-armv7l/wheel/stereo/plots 2021-06-02T08:06:55,854 copying build/lib/stereo/plots/_params_doc.py -> build/bdist.linux-armv7l/wheel/stereo/plots 2021-06-02T08:06:55,857 copying build/lib/stereo/plots/clustering.py -> build/bdist.linux-armv7l/wheel/stereo/plots 2021-06-02T08:06:55,859 copying build/lib/stereo/plots/scatter.py -> build/bdist.linux-armv7l/wheel/stereo/plots 2021-06-02T08:06:55,862 copying build/lib/stereo/plots/marker_genes.py -> build/bdist.linux-armv7l/wheel/stereo/plots 2021-06-02T08:06:55,866 creating build/bdist.linux-armv7l/wheel/stereo/utils 2021-06-02T08:06:55,867 copying build/lib/stereo/utils/correlation.py -> build/bdist.linux-armv7l/wheel/stereo/utils 2021-06-02T08:06:55,870 copying build/lib/stereo/utils/__init__.py -> build/bdist.linux-armv7l/wheel/stereo/utils 2021-06-02T08:06:55,872 copying build/lib/stereo/utils/data_helper.py -> build/bdist.linux-armv7l/wheel/stereo/utils 2021-06-02T08:06:55,874 running install_egg_info 2021-06-02T08:06:55,880 Copying stereopy.egg-info to build/bdist.linux-armv7l/wheel/stereopy-0.1-py3.7.egg-info 2021-06-02T08:06:55,894 running install_scripts 2021-06-02T08:06:55,994 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2021-06-02T08:06:55,999 creating build/bdist.linux-armv7l/wheel/stereopy-0.1.dist-info/WHEEL 2021-06-02T08:06:56,001 creating '/tmp/pip-wheel-5l5mr7qf/stereopy-0.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2021-06-02T08:06:56,005 adding 'stereo/__init__.py' 2021-06-02T08:06:56,006 adding 'stereo/config.py' 2021-06-02T08:06:56,008 adding 'stereo/log_manager.py' 2021-06-02T08:06:56,010 adding 'stereo/core/__init__.py' 2021-06-02T08:06:56,011 adding 'stereo/core/stereo_data.py' 2021-06-02T08:06:56,013 adding 'stereo/core/stereo_result.py' 2021-06-02T08:06:56,014 adding 'stereo/core/tool_base.py' 2021-06-02T08:06:56,016 adding 'stereo/io/__init__.py' 2021-06-02T08:06:56,018 adding 'stereo/io/reader.py' 2021-06-02T08:06:56,020 adding 'stereo/plots/__init__.py' 2021-06-02T08:06:56,022 adding 'stereo/plots/_params_doc.py' 2021-06-02T08:06:56,023 adding 'stereo/plots/clustering.py' 2021-06-02T08:06:56,025 adding 'stereo/plots/dim_reduce.py' 2021-06-02T08:06:56,028 adding 'stereo/plots/marker_genes.py' 2021-06-02T08:06:56,031 adding 'stereo/plots/plot_utils.py' 2021-06-02T08:06:56,033 adding 'stereo/plots/qc.py' 2021-06-02T08:06:56,035 adding 'stereo/plots/scatter.py' 2021-06-02T08:06:56,037 adding 'stereo/plots/_plot_basic/__init__.py' 2021-06-02T08:06:56,038 adding 'stereo/plots/_plot_basic/get_stereo_data.py' 2021-06-02T08:06:56,040 adding 'stereo/plots/_plot_basic/heatmap_plt.py' 2021-06-02T08:06:56,042 adding 'stereo/plots/_plot_basic/scatter_plt.py' 2021-06-02T08:06:56,044 adding 'stereo/preprocess/__init__.py' 2021-06-02T08:06:56,045 adding 'stereo/preprocess/filter.py' 2021-06-02T08:06:56,047 adding 'stereo/preprocess/normalize.py' 2021-06-02T08:06:56,048 adding 'stereo/preprocess/qc.py' 2021-06-02T08:06:56,050 adding 'stereo/preprocess/sc_transform.py' 2021-06-02T08:06:56,053 adding 'stereo/tools/__init__.py' 2021-06-02T08:06:56,055 adding 'stereo/tools/cell_type_anno.py' 2021-06-02T08:06:56,056 adding 'stereo/tools/clustering.py' 2021-06-02T08:06:56,058 adding 'stereo/tools/dim_reduce.py' 2021-06-02T08:06:56,060 adding 'stereo/tools/find_markers.py' 2021-06-02T08:06:56,061 adding 'stereo/tools/neighbors.py' 2021-06-02T08:06:56,063 adding 'stereo/tools/spatial_lag.py' 2021-06-02T08:06:56,064 adding 'stereo/tools/spatial_pattern_score.py' 2021-06-02T08:06:56,066 adding 'stereo/utils/__init__.py' 2021-06-02T08:06:56,067 adding 'stereo/utils/correlation.py' 2021-06-02T08:06:56,068 adding 'stereo/utils/data_helper.py' 2021-06-02T08:06:56,071 adding 'stereopy-0.1.dist-info/LICENSE' 2021-06-02T08:06:56,072 adding 'stereopy-0.1.dist-info/METADATA' 2021-06-02T08:06:56,073 adding 'stereopy-0.1.dist-info/WHEEL' 2021-06-02T08:06:56,074 adding 'stereopy-0.1.dist-info/top_level.txt' 2021-06-02T08:06:56,075 adding 'stereopy-0.1.dist-info/RECORD' 2021-06-02T08:06:56,077 removing build/bdist.linux-armv7l/wheel 2021-06-02T08:06:56,171 Building wheel for stereopy (setup.py): finished with status 'done' 2021-06-02T08:06:56,174 Created wheel for stereopy: filename=stereopy-0.1-py3-none-any.whl size=57163 sha256=1436faf8dcf176e53adce94e2bc87792de7d4cdaaed317c408128bc9daa5e231 2021-06-02T08:06:56,174 Stored in directory: /tmp/pip-ephem-wheel-cache-6txungrz/wheels/50/cc/86/7a99fc2cb0900a39837a3b870e221416f0e4c5ab433a07d31d 2021-06-02T08:06:56,185 Successfully built stereopy 2021-06-02T08:06:56,191 Removed build tracker: '/tmp/pip-req-tracker-fq01i52y'