2021-06-09T18:31:08,823 DEPRECATION: Python 3.5 reached the end of its life on September 13th, 2020. Please upgrade your Python as Python 3.5 is no longer maintained. pip 21.0 will drop support for Python 3.5 in January 2021. pip 21.0 will remove support for this functionality. 2021-06-09T18:31:09,407 Created temporary directory: /tmp/pip-ephem-wheel-cache-i1y1tpqq 2021-06-09T18:31:09,411 Created temporary directory: /tmp/pip-req-tracker-3d9lxkk5 2021-06-09T18:31:09,412 Initialized build tracking at /tmp/pip-req-tracker-3d9lxkk5 2021-06-09T18:31:09,412 Created build tracker: /tmp/pip-req-tracker-3d9lxkk5 2021-06-09T18:31:09,412 Entered build tracker: /tmp/pip-req-tracker-3d9lxkk5 2021-06-09T18:31:09,414 Created temporary directory: /tmp/pip-wheel-kghxr65g 2021-06-09T18:31:09,481 1 location(s) to search for versions of rcsb-utils-chem: 2021-06-09T18:31:09,481 * https://pypi.org/simple/rcsb-utils-chem/ 2021-06-09T18:31:09,481 Fetching project page and analyzing links: https://pypi.org/simple/rcsb-utils-chem/ 2021-06-09T18:31:09,483 Getting page https://pypi.org/simple/rcsb-utils-chem/ 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https://files.pythonhosted.org/packages/4a/3d/638a458bb3ccd53f2765f884071e50edc1843a72e06e5e880a2c7e658cee/rcsb.utils.chem-0.73.tar.gz#sha256=a658a5b801f7eba6e11bb0908343d0c66e0b20570a3005494c22dcb062e47351 (from https://pypi.org/simple/rcsb-utils-chem/), version: 0.73 2021-06-09T18:31:10,019 Given no hashes to check 1 links for project 'rcsb-utils-chem': discarding no candidates 2021-06-09T18:31:10,048 Collecting rcsb-utils-chem==0.73 2021-06-09T18:31:10,051 Created temporary directory: /tmp/pip-unpack-e76aggcj 2021-06-09T18:31:10,287 Downloading rcsb.utils.chem-0.73.tar.gz (82 kB) 2021-06-09T18:31:10,548 Added rcsb-utils-chem==0.73 from https://files.pythonhosted.org/packages/4a/3d/638a458bb3ccd53f2765f884071e50edc1843a72e06e5e880a2c7e658cee/rcsb.utils.chem-0.73.tar.gz#sha256=a658a5b801f7eba6e11bb0908343d0c66e0b20570a3005494c22dcb062e47351 to build tracker '/tmp/pip-req-tracker-3d9lxkk5' 2021-06-09T18:31:10,549 Running setup.py (path:/tmp/pip-wheel-kghxr65g/rcsb-utils-chem_0dcd055caf1a479d92d3b1e6f234e4f5/setup.py) egg_info for package rcsb-utils-chem 2021-06-09T18:31:10,551 Created temporary directory: /tmp/pip-pip-egg-info-oi7qbvcz 2021-06-09T18:31:10,551 Running command python setup.py egg_info 2021-06-09T18:31:12,477 running egg_info 2021-06-09T18:31:12,483 creating /tmp/pip-pip-egg-info-oi7qbvcz/rcsb.utils.chem.egg-info 2021-06-09T18:31:12,484 writing requirements to /tmp/pip-pip-egg-info-oi7qbvcz/rcsb.utils.chem.egg-info/requires.txt 2021-06-09T18:31:12,487 writing /tmp/pip-pip-egg-info-oi7qbvcz/rcsb.utils.chem.egg-info/PKG-INFO 2021-06-09T18:31:12,491 writing dependency_links to /tmp/pip-pip-egg-info-oi7qbvcz/rcsb.utils.chem.egg-info/dependency_links.txt 2021-06-09T18:31:12,493 writing entry points to /tmp/pip-pip-egg-info-oi7qbvcz/rcsb.utils.chem.egg-info/entry_points.txt 2021-06-09T18:31:12,495 writing top-level names to /tmp/pip-pip-egg-info-oi7qbvcz/rcsb.utils.chem.egg-info/top_level.txt 2021-06-09T18:31:12,499 writing manifest file '/tmp/pip-pip-egg-info-oi7qbvcz/rcsb.utils.chem.egg-info/SOURCES.txt' 2021-06-09T18:31:12,819 reading manifest file '/tmp/pip-pip-egg-info-oi7qbvcz/rcsb.utils.chem.egg-info/SOURCES.txt' 2021-06-09T18:31:12,822 reading manifest template 'MANIFEST.in' 2021-06-09T18:31:12,830 writing manifest file '/tmp/pip-pip-egg-info-oi7qbvcz/rcsb.utils.chem.egg-info/SOURCES.txt' 2021-06-09T18:31:12,953 Source in /tmp/pip-wheel-kghxr65g/rcsb-utils-chem_0dcd055caf1a479d92d3b1e6f234e4f5 has version 0.73, which satisfies requirement rcsb-utils-chem==0.73 from https://files.pythonhosted.org/packages/4a/3d/638a458bb3ccd53f2765f884071e50edc1843a72e06e5e880a2c7e658cee/rcsb.utils.chem-0.73.tar.gz#sha256=a658a5b801f7eba6e11bb0908343d0c66e0b20570a3005494c22dcb062e47351 2021-06-09T18:31:12,955 Removed rcsb-utils-chem==0.73 from https://files.pythonhosted.org/packages/4a/3d/638a458bb3ccd53f2765f884071e50edc1843a72e06e5e880a2c7e658cee/rcsb.utils.chem-0.73.tar.gz#sha256=a658a5b801f7eba6e11bb0908343d0c66e0b20570a3005494c22dcb062e47351 from build tracker '/tmp/pip-req-tracker-3d9lxkk5' 2021-06-09T18:31:12,963 Created temporary directory: /tmp/pip-unpack-4t31b26c 2021-06-09T18:31:12,964 Building wheels for collected packages: rcsb-utils-chem 2021-06-09T18:31:12,970 Created temporary directory: /tmp/pip-wheel-p32rg7_0 2021-06-09T18:31:12,971 Building wheel for rcsb-utils-chem (setup.py): started 2021-06-09T18:31:12,971 Destination directory: /tmp/pip-wheel-p32rg7_0 2021-06-09T18:31:12,972 Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-kghxr65g/rcsb-utils-chem_0dcd055caf1a479d92d3b1e6f234e4f5/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-kghxr65g/rcsb-utils-chem_0dcd055caf1a479d92d3b1e6f234e4f5/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-p32rg7_0 2021-06-09T18:31:14,852 running bdist_wheel 2021-06-09T18:31:14,867 running build 2021-06-09T18:31:14,867 running build_py 2021-06-09T18:31:15,154 creating build 2021-06-09T18:31:15,155 creating build/lib 2021-06-09T18:31:15,156 creating build/lib/rcsb 2021-06-09T18:31:15,158 copying rcsb/__init__.py -> build/lib/rcsb 2021-06-09T18:31:15,162 creating build/lib/rcsb/utils 2021-06-09T18:31:15,164 copying rcsb/utils/__init__.py -> build/lib/rcsb/utils 2021-06-09T18:31:15,170 creating build/lib/rcsb/utils/chem 2021-06-09T18:31:15,172 copying rcsb/utils/chem/OeMoleculeProvider.py -> build/lib/rcsb/utils/chem 2021-06-09T18:31:15,176 copying rcsb/utils/chem/ChemCompIndexProvider.py -> build/lib/rcsb/utils/chem 2021-06-09T18:31:15,180 copying rcsb/utils/chem/BatchChemSearch.py -> build/lib/rcsb/utils/chem 2021-06-09T18:31:15,184 copying rcsb/utils/chem/IoUtils.py -> build/lib/rcsb/utils/chem 2021-06-09T18:31:15,190 copying rcsb/utils/chem/FailList.py -> build/lib/rcsb/utils/chem 2021-06-09T18:31:15,200 copying rcsb/utils/chem/OeChemCompUtils.py -> build/lib/rcsb/utils/chem 2021-06-09T18:31:15,206 copying rcsb/utils/chem/OeDepict.py -> build/lib/rcsb/utils/chem 2021-06-09T18:31:15,211 copying rcsb/utils/chem/OeCommonUtils.py -> build/lib/rcsb/utils/chem 2021-06-09T18:31:15,214 copying rcsb/utils/chem/PdbxChemComp.py -> build/lib/rcsb/utils/chem 2021-06-09T18:31:15,219 copying rcsb/utils/chem/RdMoleculeFactory.py -> build/lib/rcsb/utils/chem 2021-06-09T18:31:15,222 copying rcsb/utils/chem/__init__.py -> build/lib/rcsb/utils/chem 2021-06-09T18:31:15,225 copying rcsb/utils/chem/OeSubStructSearchUtils.py -> build/lib/rcsb/utils/chem 2021-06-09T18:31:15,231 copying rcsb/utils/chem/OeSearchUtils.py -> build/lib/rcsb/utils/chem 2021-06-09T18:31:15,237 copying rcsb/utils/chem/ObMoleculeFactory.py -> build/lib/rcsb/utils/chem 2021-06-09T18:31:15,243 copying rcsb/utils/chem/ChemCompSearchWrapper.py -> build/lib/rcsb/utils/chem 2021-06-09T18:31:15,250 copying rcsb/utils/chem/MoleculeAnnotationsCompare.py -> build/lib/rcsb/utils/chem 2021-06-09T18:31:15,256 copying rcsb/utils/chem/OeIoUtils.py -> build/lib/rcsb/utils/chem 2021-06-09T18:31:15,264 copying rcsb/utils/chem/OeMoleculeFactory.py -> build/lib/rcsb/utils/chem 2021-06-09T18:31:15,272 copying rcsb/utils/chem/OeDepictAlign.py -> build/lib/rcsb/utils/chem 2021-06-09T18:31:15,278 copying rcsb/utils/chem/OeSearchMoleculeProvider.py -> build/lib/rcsb/utils/chem 2021-06-09T18:31:15,282 copying rcsb/utils/chem/CactvsMoleculeFactory.py -> build/lib/rcsb/utils/chem 2021-06-09T18:31:15,286 copying rcsb/utils/chem/MolecularFormula.py -> build/lib/rcsb/utils/chem 2021-06-09T18:31:15,290 copying rcsb/utils/chem/ChemCompDepictWrapper.py -> build/lib/rcsb/utils/chem 2021-06-09T18:31:15,296 copying rcsb/utils/chem/ChemCompMoleculeProvider.py -> build/lib/rcsb/utils/chem 2021-06-09T18:31:15,302 copying rcsb/utils/chem/PdbxChemCompConstants.py -> build/lib/rcsb/utils/chem 2021-06-09T18:31:15,307 copying rcsb/utils/chem/ChemCompSearchIndexProvider.py -> build/lib/rcsb/utils/chem 2021-06-09T18:31:15,312 copying rcsb/utils/chem/cactvsAnnotateMol.py -> build/lib/rcsb/utils/chem 2021-06-09T18:31:15,316 copying rcsb/utils/chem/OeAlignUtils.py -> build/lib/rcsb/utils/chem 2021-06-09T18:31:15,338 installing to build/bdist.linux-armv7l/wheel 2021-06-09T18:31:15,339 running install 2021-06-09T18:31:15,341 running install_lib 2021-06-09T18:31:15,347 creating build/bdist.linux-armv7l 2021-06-09T18:31:15,348 creating build/bdist.linux-armv7l/wheel 2021-06-09T18:31:15,351 creating build/bdist.linux-armv7l/wheel/rcsb 2021-06-09T18:31:15,353 creating build/bdist.linux-armv7l/wheel/rcsb/utils 2021-06-09T18:31:15,355 copying build/lib/rcsb/utils/__init__.py -> build/bdist.linux-armv7l/wheel/rcsb/utils 2021-06-09T18:31:15,360 creating build/bdist.linux-armv7l/wheel/rcsb/utils/chem 2021-06-09T18:31:15,362 copying build/lib/rcsb/utils/chem/OeMoleculeProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem 2021-06-09T18:31:15,367 copying build/lib/rcsb/utils/chem/ChemCompIndexProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem 2021-06-09T18:31:15,373 copying build/lib/rcsb/utils/chem/BatchChemSearch.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem 2021-06-09T18:31:15,378 copying build/lib/rcsb/utils/chem/IoUtils.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem 2021-06-09T18:31:15,384 copying build/lib/rcsb/utils/chem/FailList.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem 2021-06-09T18:31:15,395 copying build/lib/rcsb/utils/chem/OeChemCompUtils.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem 2021-06-09T18:31:15,401 copying build/lib/rcsb/utils/chem/OeDepict.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem 2021-06-09T18:31:15,406 copying build/lib/rcsb/utils/chem/OeCommonUtils.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem 2021-06-09T18:31:15,411 copying build/lib/rcsb/utils/chem/PdbxChemComp.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem 2021-06-09T18:31:15,415 copying build/lib/rcsb/utils/chem/RdMoleculeFactory.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem 2021-06-09T18:31:15,419 copying build/lib/rcsb/utils/chem/__init__.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem 2021-06-09T18:31:15,422 copying build/lib/rcsb/utils/chem/OeSubStructSearchUtils.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem 2021-06-09T18:31:15,426 copying build/lib/rcsb/utils/chem/OeSearchUtils.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem 2021-06-09T18:31:15,430 copying build/lib/rcsb/utils/chem/ObMoleculeFactory.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem 2021-06-09T18:31:15,436 copying build/lib/rcsb/utils/chem/ChemCompSearchWrapper.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem 2021-06-09T18:31:15,442 copying build/lib/rcsb/utils/chem/MoleculeAnnotationsCompare.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem 2021-06-09T18:31:15,448 copying build/lib/rcsb/utils/chem/OeIoUtils.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem 2021-06-09T18:31:15,454 copying build/lib/rcsb/utils/chem/OeMoleculeFactory.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem 2021-06-09T18:31:15,460 copying build/lib/rcsb/utils/chem/OeDepictAlign.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem 2021-06-09T18:31:15,466 copying build/lib/rcsb/utils/chem/OeSearchMoleculeProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem 2021-06-09T18:31:15,470 copying build/lib/rcsb/utils/chem/CactvsMoleculeFactory.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem 2021-06-09T18:31:15,475 copying build/lib/rcsb/utils/chem/MolecularFormula.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem 2021-06-09T18:31:15,480 copying build/lib/rcsb/utils/chem/ChemCompDepictWrapper.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem 2021-06-09T18:31:15,486 copying build/lib/rcsb/utils/chem/ChemCompMoleculeProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem 2021-06-09T18:31:15,491 copying build/lib/rcsb/utils/chem/PdbxChemCompConstants.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem 2021-06-09T18:31:15,495 copying build/lib/rcsb/utils/chem/ChemCompSearchIndexProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem 2021-06-09T18:31:15,499 copying build/lib/rcsb/utils/chem/cactvsAnnotateMol.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem 2021-06-09T18:31:15,502 copying build/lib/rcsb/utils/chem/OeAlignUtils.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem 2021-06-09T18:31:15,507 copying build/lib/rcsb/__init__.py -> build/bdist.linux-armv7l/wheel/rcsb 2021-06-09T18:31:15,509 running install_egg_info 2021-06-09T18:31:15,547 running egg_info 2021-06-09T18:31:15,548 writing requirements to rcsb.utils.chem.egg-info/requires.txt 2021-06-09T18:31:15,550 writing top-level names to rcsb.utils.chem.egg-info/top_level.txt 2021-06-09T18:31:15,553 writing entry points to rcsb.utils.chem.egg-info/entry_points.txt 2021-06-09T18:31:15,554 writing rcsb.utils.chem.egg-info/PKG-INFO 2021-06-09T18:31:15,559 writing dependency_links to rcsb.utils.chem.egg-info/dependency_links.txt 2021-06-09T18:31:15,570 reading manifest file 'rcsb.utils.chem.egg-info/SOURCES.txt' 2021-06-09T18:31:15,575 reading manifest template 'MANIFEST.in' 2021-06-09T18:31:15,585 writing manifest file 'rcsb.utils.chem.egg-info/SOURCES.txt' 2021-06-09T18:31:15,587 Copying rcsb.utils.chem.egg-info to build/bdist.linux-armv7l/wheel/rcsb.utils.chem-0.73-py3.5.egg-info 2021-06-09T18:31:15,612 running install_scripts 2021-06-09T18:31:15,804 creating build/bdist.linux-armv7l/wheel/rcsb.utils.chem-0.73.dist-info/WHEEL 2021-06-09T18:31:16,117 Building wheel for rcsb-utils-chem (setup.py): finished with status 'done' 2021-06-09T18:31:16,122 Created wheel for rcsb-utils-chem: filename=rcsb.utils.chem-0.73-py2.py3-none-any.whl size=96523 sha256=02831d0de3c545ccb54452c091f4729a999489a7895d63b2c54dded95b804328 2021-06-09T18:31:16,123 Stored in directory: /tmp/pip-ephem-wheel-cache-i1y1tpqq/wheels/57/57/38/e7df64104522edf147fc88f71d6a0a4fe1cf322ab466fc08ee 2021-06-09T18:31:16,139 Successfully built rcsb-utils-chem 2021-06-09T18:31:16,150 Removed build tracker: '/tmp/pip-req-tracker-3d9lxkk5'