2021-07-05T20:53:11,526 DEPRECATION: Python 3.5 reached the end of its life on September 13th, 2020. Please upgrade your Python as Python 3.5 is no longer maintained. pip 21.0 will drop support for Python 3.5 in January 2021. pip 21.0 will remove support for this functionality.
2021-07-05T20:53:12,082 Created temporary directory: /tmp/pip-ephem-wheel-cache-8om4akok
2021-07-05T20:53:12,086 Created temporary directory: /tmp/pip-req-tracker-35pqy8uf
2021-07-05T20:53:12,087 Initialized build tracking at /tmp/pip-req-tracker-35pqy8uf
2021-07-05T20:53:12,087 Created build tracker: /tmp/pip-req-tracker-35pqy8uf
2021-07-05T20:53:12,088 Entered build tracker: /tmp/pip-req-tracker-35pqy8uf
2021-07-05T20:53:12,089 Created temporary directory: /tmp/pip-wheel-etg2t5iv
2021-07-05T20:53:12,148 1 location(s) to search for versions of pharmacodi:
2021-07-05T20:53:12,148 * https://pypi.org/simple/pharmacodi/
2021-07-05T20:53:12,149 Fetching project page and analyzing links: https://pypi.org/simple/pharmacodi/
2021-07-05T20:53:12,151 Getting page https://pypi.org/simple/pharmacodi/
2021-07-05T20:53:12,155 Found index url https://pypi.org/simple
2021-07-05T20:53:12,445   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/ef/fe/00d6b0714394a4895592dfc165633c5538544327ead3606fba1539c0e626/PharmacoDI-0.0.1-py3.8.egg#sha256=a5b291e4d183b7aff6e6227d7bbc110eda3ca8e24da056490482f6ed482d1abc (from https://pypi.org/simple/pharmacodi/)
2021-07-05T20:53:12,445   Found link https://files.pythonhosted.org/packages/3a/9e/612d134c1fb67c2f3d821caac947da3612231a42ed3d48d93760f8232b4d/PharmacoDI-0.0.1.tar.gz#sha256=bf701641034eb4be1ecae36d55b5379f30c5c4309f40c852044e73f747fc1402 (from https://pypi.org/simple/pharmacodi/), version: 0.0.1
2021-07-05T20:53:12,446   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/65/d1/58d48213c23a81140cdaffc9f67cb40e1c8a3568c4ded9d3407468461500/PharmacoDI-0.0.3-py3.8.egg#sha256=d6427b8b334ab100ac0c818bd2456459f79c9d816a77de03c1c7cd1c1008f92c (from https://pypi.org/simple/pharmacodi/)
2021-07-05T20:53:12,447   Found link https://files.pythonhosted.org/packages/ef/57/561eec13fd346d32748ae64330a6ecb46ee5500e3d15bf1afc644d272b30/PharmacoDI-0.0.4.tar.gz#sha256=1be88085d5a7612b7b3f5a1334ba8494aa0b6502cd8447782783e15cbc6a0fc6 (from https://pypi.org/simple/pharmacodi/), version: 0.0.4
2021-07-05T20:53:12,447   Found link https://files.pythonhosted.org/packages/62/09/3f7c908dd7322d0963fbf313808e4d071474d8036fe0af9b60b51cae312a/PharmacoDI-0.0.5.tar.gz#sha256=95fcfedbb3ada087b865b57a80cf8b9e6b39ae40b7558aae7af0b1229d2ede8a (from https://pypi.org/simple/pharmacodi/), version: 0.0.5
2021-07-05T20:53:12,473 Given no hashes to check 1 links for project 'pharmacodi': discarding no candidates
2021-07-05T20:53:12,501 Collecting pharmacodi==0.0.5
2021-07-05T20:53:12,504   Created temporary directory: /tmp/pip-unpack-dcomfxzd
2021-07-05T20:53:12,719   Downloading PharmacoDI-0.0.5.tar.gz (31 kB)
2021-07-05T20:53:12,888   Added pharmacodi==0.0.5 from https://files.pythonhosted.org/packages/62/09/3f7c908dd7322d0963fbf313808e4d071474d8036fe0af9b60b51cae312a/PharmacoDI-0.0.5.tar.gz#sha256=95fcfedbb3ada087b865b57a80cf8b9e6b39ae40b7558aae7af0b1229d2ede8a to build tracker '/tmp/pip-req-tracker-35pqy8uf'
2021-07-05T20:53:12,890     Running setup.py (path:/tmp/pip-wheel-etg2t5iv/pharmacodi_f5c76fcdaed64187a2f22950cc2bbee5/setup.py) egg_info for package pharmacodi
2021-07-05T20:53:12,891     Created temporary directory: /tmp/pip-pip-egg-info-m3c_tmss
2021-07-05T20:53:12,892     Running command python setup.py egg_info
2021-07-05T20:53:14,763     running egg_info
2021-07-05T20:53:14,769     creating /tmp/pip-pip-egg-info-m3c_tmss/PharmacoDI.egg-info
2021-07-05T20:53:14,770     writing dependency_links to /tmp/pip-pip-egg-info-m3c_tmss/PharmacoDI.egg-info/dependency_links.txt
2021-07-05T20:53:14,772     writing /tmp/pip-pip-egg-info-m3c_tmss/PharmacoDI.egg-info/PKG-INFO
2021-07-05T20:53:14,776     writing top-level names to /tmp/pip-pip-egg-info-m3c_tmss/PharmacoDI.egg-info/top_level.txt
2021-07-05T20:53:14,778     writing requirements to /tmp/pip-pip-egg-info-m3c_tmss/PharmacoDI.egg-info/requires.txt
2021-07-05T20:53:14,782     writing manifest file '/tmp/pip-pip-egg-info-m3c_tmss/PharmacoDI.egg-info/SOURCES.txt'
2021-07-05T20:53:15,086     reading manifest file '/tmp/pip-pip-egg-info-m3c_tmss/PharmacoDI.egg-info/SOURCES.txt'
2021-07-05T20:53:15,089     reading manifest template 'MANIFEST.in'
2021-07-05T20:53:15,103     warning: no previously-included files matching '*' found under directory 'data'
2021-07-05T20:53:15,104     warning: no previously-included files matching '*' found under directory 'scripts'
2021-07-05T20:53:15,105     warning: no previously-included files matching '*' found under directory 'dist'
2021-07-05T20:53:15,112     writing manifest file '/tmp/pip-pip-egg-info-m3c_tmss/PharmacoDI.egg-info/SOURCES.txt'
2021-07-05T20:53:15,234   Source in /tmp/pip-wheel-etg2t5iv/pharmacodi_f5c76fcdaed64187a2f22950cc2bbee5 has version 0.0.5, which satisfies requirement pharmacodi==0.0.5 from https://files.pythonhosted.org/packages/62/09/3f7c908dd7322d0963fbf313808e4d071474d8036fe0af9b60b51cae312a/PharmacoDI-0.0.5.tar.gz#sha256=95fcfedbb3ada087b865b57a80cf8b9e6b39ae40b7558aae7af0b1229d2ede8a
2021-07-05T20:53:15,236   Removed pharmacodi==0.0.5 from https://files.pythonhosted.org/packages/62/09/3f7c908dd7322d0963fbf313808e4d071474d8036fe0af9b60b51cae312a/PharmacoDI-0.0.5.tar.gz#sha256=95fcfedbb3ada087b865b57a80cf8b9e6b39ae40b7558aae7af0b1229d2ede8a from build tracker '/tmp/pip-req-tracker-35pqy8uf'
2021-07-05T20:53:15,242 Created temporary directory: /tmp/pip-unpack-zwfc08u8
2021-07-05T20:53:15,243 Building wheels for collected packages: pharmacodi
2021-07-05T20:53:15,249   Created temporary directory: /tmp/pip-wheel-fbc8piat
2021-07-05T20:53:15,250   Building wheel for pharmacodi (setup.py): started
2021-07-05T20:53:15,251   Destination directory: /tmp/pip-wheel-fbc8piat
2021-07-05T20:53:15,251   Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-etg2t5iv/pharmacodi_f5c76fcdaed64187a2f22950cc2bbee5/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-etg2t5iv/pharmacodi_f5c76fcdaed64187a2f22950cc2bbee5/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-fbc8piat
2021-07-05T20:53:17,119   running bdist_wheel
2021-07-05T20:53:17,132   running build
2021-07-05T20:53:17,133   running build_py
2021-07-05T20:53:17,423   creating build
2021-07-05T20:53:17,424   creating build/lib
2021-07-05T20:53:17,425   creating build/lib/PharmacoDI
2021-07-05T20:53:17,427   copying PharmacoDI/build_primary_pset_tables.py -> build/lib/PharmacoDI
2021-07-05T20:53:17,430   copying PharmacoDI/get_gene_targets.py -> build/lib/PharmacoDI
2021-07-05T20:53:17,434   copying PharmacoDI/build_target_tables.py -> build/lib/PharmacoDI
2021-07-05T20:53:17,437   copying PharmacoDI/download_gene_signatures.py -> build/lib/PharmacoDI
2021-07-05T20:53:17,440   copying PharmacoDI/build_gene_compound_tissue_dataset_tables.py -> build/lib/PharmacoDI
2021-07-05T20:53:17,443   copying PharmacoDI/download_psets.py -> build/lib/PharmacoDI
2021-07-05T20:53:17,446   copying PharmacoDI/build_all_pset_tables.py -> build/lib/PharmacoDI
2021-07-05T20:53:17,450   copying PharmacoDI/get_chembl_compound_targets.py -> build/lib/PharmacoDI
2021-07-05T20:53:17,454   copying PharmacoDI/build_experiment_tables.py -> build/lib/PharmacoDI
2021-07-05T20:53:17,457   copying PharmacoDI/__init__.py -> build/lib/PharmacoDI
2021-07-05T20:53:17,460   copying PharmacoDI/build_clinical_trial_tables.py -> build/lib/PharmacoDI
2021-07-05T20:53:17,464   copying PharmacoDI/get_target_annotations.py -> build/lib/PharmacoDI
2021-07-05T20:53:17,467   copying PharmacoDI/combine_pset_tables.py -> build/lib/PharmacoDI
2021-07-05T20:53:17,471   copying PharmacoDI/map_genes_to_genomic_coordinates.py -> build/lib/PharmacoDI
2021-07-05T20:53:17,474   copying PharmacoDI/build_synonym_tables.py -> build/lib/PharmacoDI
2021-07-05T20:53:17,478   copying PharmacoDI/write_pset_table.py -> build/lib/PharmacoDI
2021-07-05T20:53:17,481   copying PharmacoDI/download_canonical_psets.py -> build/lib/PharmacoDI
2021-07-05T20:53:17,484   copying PharmacoDI/build_meta_tables.py -> build/lib/PharmacoDI
2021-07-05T20:53:17,488   copying PharmacoDI/build_dataset_join_tables.py -> build/lib/PharmacoDI
2021-07-05T20:53:17,491   copying PharmacoDI/get_chembl_targets.py -> build/lib/PharmacoDI
2021-07-05T20:53:17,494   copying PharmacoDI/build_cellosaurus.py -> build/lib/PharmacoDI
2021-07-05T20:53:17,497   copying PharmacoDI/read_pset.py -> build/lib/PharmacoDI
2021-07-05T20:53:17,508   installing to build/bdist.linux-armv7l/wheel
2021-07-05T20:53:17,509   running install
2021-07-05T20:53:17,510   running install_lib
2021-07-05T20:53:17,517   creating build/bdist.linux-armv7l
2021-07-05T20:53:17,517   creating build/bdist.linux-armv7l/wheel
2021-07-05T20:53:17,521   creating build/bdist.linux-armv7l/wheel/PharmacoDI
2021-07-05T20:53:17,522   copying build/lib/PharmacoDI/build_primary_pset_tables.py -> build/bdist.linux-armv7l/wheel/PharmacoDI
2021-07-05T20:53:17,526   copying build/lib/PharmacoDI/get_gene_targets.py -> build/bdist.linux-armv7l/wheel/PharmacoDI
2021-07-05T20:53:17,529   copying build/lib/PharmacoDI/build_target_tables.py -> build/bdist.linux-armv7l/wheel/PharmacoDI
2021-07-05T20:53:17,532   copying build/lib/PharmacoDI/download_gene_signatures.py -> build/bdist.linux-armv7l/wheel/PharmacoDI
2021-07-05T20:53:17,535   copying build/lib/PharmacoDI/build_gene_compound_tissue_dataset_tables.py -> build/bdist.linux-armv7l/wheel/PharmacoDI
2021-07-05T20:53:17,539   copying build/lib/PharmacoDI/download_psets.py -> build/bdist.linux-armv7l/wheel/PharmacoDI
2021-07-05T20:53:17,543   copying build/lib/PharmacoDI/build_all_pset_tables.py -> build/bdist.linux-armv7l/wheel/PharmacoDI
2021-07-05T20:53:17,548   copying build/lib/PharmacoDI/get_chembl_compound_targets.py -> build/bdist.linux-armv7l/wheel/PharmacoDI
2021-07-05T20:53:17,553   copying build/lib/PharmacoDI/build_experiment_tables.py -> build/bdist.linux-armv7l/wheel/PharmacoDI
2021-07-05T20:53:17,558   copying build/lib/PharmacoDI/__init__.py -> build/bdist.linux-armv7l/wheel/PharmacoDI
2021-07-05T20:53:17,561   copying build/lib/PharmacoDI/build_clinical_trial_tables.py -> build/bdist.linux-armv7l/wheel/PharmacoDI
2021-07-05T20:53:17,564   copying build/lib/PharmacoDI/get_target_annotations.py -> build/bdist.linux-armv7l/wheel/PharmacoDI
2021-07-05T20:53:17,567   copying build/lib/PharmacoDI/combine_pset_tables.py -> build/bdist.linux-armv7l/wheel/PharmacoDI
2021-07-05T20:53:17,571   copying build/lib/PharmacoDI/map_genes_to_genomic_coordinates.py -> build/bdist.linux-armv7l/wheel/PharmacoDI
2021-07-05T20:53:17,574   copying build/lib/PharmacoDI/build_synonym_tables.py -> build/bdist.linux-armv7l/wheel/PharmacoDI
2021-07-05T20:53:17,577   copying build/lib/PharmacoDI/write_pset_table.py -> build/bdist.linux-armv7l/wheel/PharmacoDI
2021-07-05T20:53:17,581   copying build/lib/PharmacoDI/download_canonical_psets.py -> build/bdist.linux-armv7l/wheel/PharmacoDI
2021-07-05T20:53:17,586   copying build/lib/PharmacoDI/build_meta_tables.py -> build/bdist.linux-armv7l/wheel/PharmacoDI
2021-07-05T20:53:17,591   copying build/lib/PharmacoDI/build_dataset_join_tables.py -> build/bdist.linux-armv7l/wheel/PharmacoDI
2021-07-05T20:53:17,596   copying build/lib/PharmacoDI/get_chembl_targets.py -> build/bdist.linux-armv7l/wheel/PharmacoDI
2021-07-05T20:53:17,599   copying build/lib/PharmacoDI/build_cellosaurus.py -> build/bdist.linux-armv7l/wheel/PharmacoDI
2021-07-05T20:53:17,602   copying build/lib/PharmacoDI/read_pset.py -> build/bdist.linux-armv7l/wheel/PharmacoDI
2021-07-05T20:53:17,605   running install_egg_info
2021-07-05T20:53:17,642   running egg_info
2021-07-05T20:53:17,643   writing dependency_links to PharmacoDI.egg-info/dependency_links.txt
2021-07-05T20:53:17,645   writing requirements to PharmacoDI.egg-info/requires.txt
2021-07-05T20:53:17,647   writing top-level names to PharmacoDI.egg-info/top_level.txt
2021-07-05T20:53:17,648   writing PharmacoDI.egg-info/PKG-INFO
2021-07-05T20:53:17,659   reading manifest file 'PharmacoDI.egg-info/SOURCES.txt'
2021-07-05T20:53:17,663   reading manifest template 'MANIFEST.in'
2021-07-05T20:53:17,690   warning: no previously-included files matching '*' found under directory 'data'
2021-07-05T20:53:17,692   warning: no previously-included files matching '*' found under directory 'scripts'
2021-07-05T20:53:17,693   warning: no previously-included files matching '*' found under directory 'dist'
2021-07-05T20:53:17,702   writing manifest file 'PharmacoDI.egg-info/SOURCES.txt'
2021-07-05T20:53:17,704   Copying PharmacoDI.egg-info to build/bdist.linux-armv7l/wheel/PharmacoDI-0.0.5-py3.5.egg-info
2021-07-05T20:53:17,722   running install_scripts
2021-07-05T20:53:17,885   creating build/bdist.linux-armv7l/wheel/PharmacoDI-0.0.5.dist-info/WHEEL
2021-07-05T20:53:18,121   Building wheel for pharmacodi (setup.py): finished with status 'done'
2021-07-05T20:53:18,125   Created wheel for pharmacodi: filename=PharmacoDI-0.0.5-py3-none-any.whl size=36363 sha256=d0b1d7dd830b78a0ea13901cc0b66fd98e00f7739dbe8a49718173e8bebaa30b
2021-07-05T20:53:18,126   Stored in directory: /tmp/pip-ephem-wheel-cache-8om4akok/wheels/70/ea/38/25ca7e15fddeabf06f2ae9ed1c95ab52643af960e758c3b945
2021-07-05T20:53:18,141 Successfully built pharmacodi
2021-07-05T20:53:18,148 Removed build tracker: '/tmp/pip-req-tracker-35pqy8uf'