2021-07-09T22:38:38,548 Created temporary directory: /tmp/pip-ephem-wheel-cache-fzhyt0_0
2021-07-09T22:38:38,551 Created temporary directory: /tmp/pip-req-tracker-t7pkoh5t
2021-07-09T22:38:38,551 Initialized build tracking at /tmp/pip-req-tracker-t7pkoh5t
2021-07-09T22:38:38,551 Created build tracker: /tmp/pip-req-tracker-t7pkoh5t
2021-07-09T22:38:38,551 Entered build tracker: /tmp/pip-req-tracker-t7pkoh5t
2021-07-09T22:38:38,552 Created temporary directory: /tmp/pip-wheel-8bj_68u3
2021-07-09T22:38:38,585 1 location(s) to search for versions of scikit-bio:
2021-07-09T22:38:38,585 * https://pypi.org/simple/scikit-bio/
2021-07-09T22:38:38,586 Fetching project page and analyzing links: https://pypi.org/simple/scikit-bio/
2021-07-09T22:38:38,586 Getting page https://pypi.org/simple/scikit-bio/
2021-07-09T22:38:38,588 Found index url https://pypi.org/simple
2021-07-09T22:38:38,683   Found link https://files.pythonhosted.org/packages/e0/4f/9e53704ce04a5e60511449a5e16511c6e20219ed0932e4aeea84fe2189fd/scikit-bio-0.1.0.tar.gz#sha256=e68193db29015e8f861b7d548f432384aa1741575028ce9a138b39ebee66e1ed (from https://pypi.org/simple/scikit-bio/), version: 0.1.0
2021-07-09T22:38:38,684   Found link https://files.pythonhosted.org/packages/91/8b/ea20137d6b84808b3dd6a7ad162dd80dcda40934428824d1ce87b8983b81/scikit-bio-0.1.1.tar.gz#sha256=f758a5136a211cba16c8e6f1ed250f0fadb27fab436c5b7a73902dbb114618df (from https://pypi.org/simple/scikit-bio/), version: 0.1.1
2021-07-09T22:38:38,684   Found link https://files.pythonhosted.org/packages/5f/6e/adc704fa25e9789bfc17882261010320ea9c6148d9d2e28083a5e57a3e9f/scikit-bio-0.1.2.tar.gz#sha256=bdd9cb68dcc5e3ffc00fa5ae21e9e0f92f1f9c2e5a24a671596bb39d0d3e02a7 (from https://pypi.org/simple/scikit-bio/), version: 0.1.2
2021-07-09T22:38:38,684   Found link https://files.pythonhosted.org/packages/da/03/82ad31dc38265135b432b34b2cec0680fee841e0bdc5f90b5a4596beafb3/scikit-bio-0.1.3.tar.gz#sha256=11af62a5d8302da204c004b16bc625cc055e7322633b289353929ccc4b872e74 (from https://pypi.org/simple/scikit-bio/), version: 0.1.3
2021-07-09T22:38:38,685   Found link https://files.pythonhosted.org/packages/b0/70/92b5bb9fc66ef4d54e1bf67626bda04a41ed723b5eb25c018154728e2b26/scikit-bio-0.1.4.tar.gz#sha256=466d50ced117dafe24f734eb6afd2ec0465caebe5d3e775402582ac77eecc2a8 (from https://pypi.org/simple/scikit-bio/), version: 0.1.4
2021-07-09T22:38:38,685   Found link https://files.pythonhosted.org/packages/5f/21/c6879978a222a04f1ac1b0a535a18111c84367ee22a5c93e6c0503f57e01/scikit-bio-0.1.5.tar.gz#sha256=f136639c66f48d1e83b9799e044c49f0febefa4ead4b4fb7c88ec503147bdb03 (from https://pypi.org/simple/scikit-bio/), version: 0.1.5
2021-07-09T22:38:38,685   Found link https://files.pythonhosted.org/packages/99/76/0c0bd2d6d9973a001477535c68772ff35f543324e36afe21c4f7d6721327/scikit-bio-0.2.0.tar.gz#sha256=348687b973be55505ec7e90c40a21921533d3b5021599705922b8c730cb8c872 (from https://pypi.org/simple/scikit-bio/), version: 0.2.0
2021-07-09T22:38:38,686   Found link https://files.pythonhosted.org/packages/7b/74/77cf9b45ea0df4d3b8c3adcbd6f59e0b0603d1a3a2fed1b1ae6365232ac6/scikit-bio-0.2.1.tar.gz#sha256=adc7a3aa93ca7a3f642531e2cf64778ae243087fd6279d5354fdf157943f41cb (from https://pypi.org/simple/scikit-bio/), version: 0.2.1
2021-07-09T22:38:38,686   Found link https://files.pythonhosted.org/packages/bd/0a/6a5906fd53616c0763c5f445b5dc42907720f344318a1f07627986d22f33/scikit-bio-0.2.2.tar.gz#sha256=6c5fb4b6baec0abde209d33e86e95ff4a776f653a6c3916aa95831eafe03472a (from https://pypi.org/simple/scikit-bio/), version: 0.2.2
2021-07-09T22:38:38,686   Found link https://files.pythonhosted.org/packages/8e/70/559566c9dbde9435360058c420a819b4e8ce844f7ebd94daec9836f4be24/scikit-bio-0.2.3.tar.gz#sha256=5feec63b49249360d2bb55d0163d7066f530d163b5474a3319ec197e7e74c683 (from https://pypi.org/simple/scikit-bio/), version: 0.2.3
2021-07-09T22:38:38,686   Found link https://files.pythonhosted.org/packages/d9/cb/c4684ce5c521de96411c2b88255feb45077e0b2df7ebbdf946abe5caaf25/scikit-bio-0.4.0.tar.gz#sha256=90a3f1ffd9401d8a8f8c1ba8fdd1ea63577fb2063209440d27e8e0834322a1e3 (from https://pypi.org/simple/scikit-bio/), version: 0.4.0
2021-07-09T22:38:38,687   Found link https://files.pythonhosted.org/packages/12/02/81edd2941d892cb4d0144be716c341b9a6fd255046c08d1b7bd6c70a0112/scikit-bio-0.4.1.tar.gz#sha256=66e755b6c7d5b861c7eb63aeb46f4d9afe74ee0ac93c1215e0aa57003e573b0b (from https://pypi.org/simple/scikit-bio/), version: 0.4.1
2021-07-09T22:38:38,687   Found link https://files.pythonhosted.org/packages/a8/87/23635a6a9b6a1abdf78ccfc1e71929570be4c4ab4004eab66da9dd4a5c6a/scikit-bio-0.4.2.tar.gz#sha256=fe33a6cd7e6eb3fd8c088491422e499cfb36fab63c38659b587230f3dd63d91a (from https://pypi.org/simple/scikit-bio/), version: 0.4.2
2021-07-09T22:38:38,687   Found link https://files.pythonhosted.org/packages/95/60/f4c269a6dfaf9d027adba6a81497e5d238cf5e604f53206b4ea50ed1145f/scikit-bio-0.5.0.zip#sha256=482194dd827b86fdf340d1576b07d70f8c62158d471d733fa3e73fe316afaa3a (from https://pypi.org/simple/scikit-bio/), version: 0.5.0
2021-07-09T22:38:38,688   Found link https://files.pythonhosted.org/packages/e5/7e/cf03a7e53da18ae6a847894384838e9a36a98b48909a3f347ff6077c7304/scikit-bio-0.5.1.tar.gz#sha256=2d606f0bbd50df3e5814c10260d0e1a35484ecf141e5e5c809d9c9dbf87a3655 (from https://pypi.org/simple/scikit-bio/), version: 0.5.1
2021-07-09T22:38:38,688   Found link https://files.pythonhosted.org/packages/98/ee/08995b89efccf2bf8a0307a1eb7825dceb199e64a3db24cec832c0ca0baf/scikit-bio-0.5.2.tar.gz#sha256=566c83249d2d338104d106c3a8ba36fa1afeabf10ead8e95b84605b71c65b743 (from https://pypi.org/simple/scikit-bio/), version: 0.5.2
2021-07-09T22:38:38,688   Found link https://files.pythonhosted.org/packages/39/07/4e3bcf7a7c254154ac445684d5f646ccc4a6ce6bfc3b0cc8030136215b8a/scikit-bio-0.5.3.tar.gz#sha256=fbeebe39b0026601fa0f641fdad45abc7c2810fa75d43142f3c5473aff07ff59 (from https://pypi.org/simple/scikit-bio/), version: 0.5.3
2021-07-09T22:38:38,688   Found link https://files.pythonhosted.org/packages/ed/e0/3ae790c5c260be0968a6d41108e35f327365e5460c9d8672714fd136817d/scikit-bio-0.5.4.tar.gz#sha256=3243f1995ef24643c09ff4d9391a79528aadd8232e5aa5d66c38d7b2e0c92f24 (from https://pypi.org/simple/scikit-bio/), version: 0.5.4
2021-07-09T22:38:38,689   Found link https://files.pythonhosted.org/packages/2d/ff/3a909ae8c212305846f7e87f86f3902408b55b958eccedf5d4349e76c671/scikit-bio-0.5.5.tar.gz#sha256=9fa813be66e88a994f7b7a68b8ba2216e205c525caa8585386ebdeebed6428df (from https://pypi.org/simple/scikit-bio/), version: 0.5.5
2021-07-09T22:38:38,689   Found link https://files.pythonhosted.org/packages/66/b0/054ef21e024d24422882958072973cd192b492e004a3ce4e9614ef173d9b/scikit-bio-0.5.6.tar.gz#sha256=48b73ec53ce0ff2c2e3e05f3cfcf93527c1525a8d3e9dd4ae317b4219c37f0ea (from https://pypi.org/simple/scikit-bio/), version: 0.5.6
2021-07-09T22:38:38,689 Skipping link: not a file: https://pypi.org/simple/scikit-bio/
2021-07-09T22:38:38,708 Given no hashes to check 1 links for project 'scikit-bio': discarding no candidates
2021-07-09T22:38:38,726 Collecting scikit-bio==0.1.4
2021-07-09T22:38:38,728   Created temporary directory: /tmp/pip-unpack-7dvhp27l
2021-07-09T22:38:39,894   Downloading scikit-bio-0.1.4.tar.gz (4.0 MB)
2021-07-09T22:38:41,257   Added scikit-bio==0.1.4 from https://files.pythonhosted.org/packages/b0/70/92b5bb9fc66ef4d54e1bf67626bda04a41ed723b5eb25c018154728e2b26/scikit-bio-0.1.4.tar.gz#sha256=466d50ced117dafe24f734eb6afd2ec0465caebe5d3e775402582ac77eecc2a8 to build tracker '/tmp/pip-req-tracker-t7pkoh5t'
2021-07-09T22:38:41,258     Running setup.py (path:/tmp/pip-wheel-8bj_68u3/scikit-bio_78bb1bb4b9334c9fbf6cf1d15a7e3d33/setup.py) egg_info for package scikit-bio
2021-07-09T22:38:41,258     Created temporary directory: /tmp/pip-pip-egg-info-pofz1rkc
2021-07-09T22:38:41,259     Running command python setup.py egg_info
2021-07-09T22:38:42,347     running egg_info
2021-07-09T22:38:42,349     creating /tmp/pip-pip-egg-info-pofz1rkc/scikit_bio.egg-info
2021-07-09T22:38:42,350     writing /tmp/pip-pip-egg-info-pofz1rkc/scikit_bio.egg-info/PKG-INFO
2021-07-09T22:38:42,353     writing dependency_links to /tmp/pip-pip-egg-info-pofz1rkc/scikit_bio.egg-info/dependency_links.txt
2021-07-09T22:38:42,355     writing requirements to /tmp/pip-pip-egg-info-pofz1rkc/scikit_bio.egg-info/requires.txt
2021-07-09T22:38:42,356     writing top-level names to /tmp/pip-pip-egg-info-pofz1rkc/scikit_bio.egg-info/top_level.txt
2021-07-09T22:38:42,357     writing manifest file '/tmp/pip-pip-egg-info-pofz1rkc/scikit_bio.egg-info/SOURCES.txt'
2021-07-09T22:38:42,736     reading manifest file '/tmp/pip-pip-egg-info-pofz1rkc/scikit_bio.egg-info/SOURCES.txt'
2021-07-09T22:38:42,738     reading manifest template 'MANIFEST.in'
2021-07-09T22:38:42,771     no previously-included directories found matching 'doc/build'
2021-07-09T22:38:42,773     warning: no previously-included files matching '*.pyc' found anywhere in distribution
2021-07-09T22:38:42,775     warning: no previously-included files matching '*.pyo' found anywhere in distribution
2021-07-09T22:38:42,775     adding license file 'COPYING.txt'
2021-07-09T22:38:42,792     writing manifest file '/tmp/pip-pip-egg-info-pofz1rkc/scikit_bio.egg-info/SOURCES.txt'
2021-07-09T22:38:42,898   Source in /tmp/pip-wheel-8bj_68u3/scikit-bio_78bb1bb4b9334c9fbf6cf1d15a7e3d33 has version 0.1.4, which satisfies requirement scikit-bio==0.1.4 from https://files.pythonhosted.org/packages/b0/70/92b5bb9fc66ef4d54e1bf67626bda04a41ed723b5eb25c018154728e2b26/scikit-bio-0.1.4.tar.gz#sha256=466d50ced117dafe24f734eb6afd2ec0465caebe5d3e775402582ac77eecc2a8
2021-07-09T22:38:42,899   Removed scikit-bio==0.1.4 from https://files.pythonhosted.org/packages/b0/70/92b5bb9fc66ef4d54e1bf67626bda04a41ed723b5eb25c018154728e2b26/scikit-bio-0.1.4.tar.gz#sha256=466d50ced117dafe24f734eb6afd2ec0465caebe5d3e775402582ac77eecc2a8 from build tracker '/tmp/pip-req-tracker-t7pkoh5t'
2021-07-09T22:38:42,904 Created temporary directory: /tmp/pip-unpack-6s08oq38
2021-07-09T22:38:42,904 Building wheels for collected packages: scikit-bio
2021-07-09T22:38:42,908   Created temporary directory: /tmp/pip-wheel-9_i9rqna
2021-07-09T22:38:42,908   Building wheel for scikit-bio (setup.py): started
2021-07-09T22:38:42,909   Destination directory: /tmp/pip-wheel-9_i9rqna
2021-07-09T22:38:42,909   Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-8bj_68u3/scikit-bio_78bb1bb4b9334c9fbf6cf1d15a7e3d33/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-8bj_68u3/scikit-bio_78bb1bb4b9334c9fbf6cf1d15a7e3d33/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-9_i9rqna
2021-07-09T22:38:43,976   running bdist_wheel
2021-07-09T22:38:44,164   running build
2021-07-09T22:38:44,164   running build_py
2021-07-09T22:38:44,300   creating build
2021-07-09T22:38:44,301   creating build/lib.linux-armv7l-3.9
2021-07-09T22:38:44,303   creating build/lib.linux-armv7l-3.9/skbio
2021-07-09T22:38:44,304   copying skbio/__init__.py -> build/lib.linux-armv7l-3.9/skbio
2021-07-09T22:38:44,306   creating build/lib.linux-armv7l-3.9/skbio/core
2021-07-09T22:38:44,307   copying skbio/core/workflow.py -> build/lib.linux-armv7l-3.9/skbio/core
2021-07-09T22:38:44,310   copying skbio/core/sequence.py -> build/lib.linux-armv7l-3.9/skbio/core
2021-07-09T22:38:44,313   copying skbio/core/exception.py -> build/lib.linux-armv7l-3.9/skbio/core
2021-07-09T22:38:44,315   copying skbio/core/warning.py -> build/lib.linux-armv7l-3.9/skbio/core
2021-07-09T22:38:44,317   copying skbio/core/genetic_code.py -> build/lib.linux-armv7l-3.9/skbio/core
2021-07-09T22:38:44,319   copying skbio/core/__init__.py -> build/lib.linux-armv7l-3.9/skbio/core
2021-07-09T22:38:44,321   copying skbio/core/distance.py -> build/lib.linux-armv7l-3.9/skbio/core
2021-07-09T22:38:44,325   creating build/lib.linux-armv7l-3.9/skbio/format
2021-07-09T22:38:44,326   copying skbio/format/__init__.py -> build/lib.linux-armv7l-3.9/skbio/format
2021-07-09T22:38:44,329   creating build/lib.linux-armv7l-3.9/skbio/util
2021-07-09T22:38:44,329   copying skbio/util/io.py -> build/lib.linux-armv7l-3.9/skbio/util
2021-07-09T22:38:44,331   copying skbio/util/misc.py -> build/lib.linux-armv7l-3.9/skbio/util
2021-07-09T22:38:44,334   copying skbio/util/__init__.py -> build/lib.linux-armv7l-3.9/skbio/util
2021-07-09T22:38:44,336   copying skbio/util/testing.py -> build/lib.linux-armv7l-3.9/skbio/util
2021-07-09T22:38:44,338   creating build/lib.linux-armv7l-3.9/skbio/app
2021-07-09T22:38:44,339   copying skbio/app/__init__.py -> build/lib.linux-armv7l-3.9/skbio/app
2021-07-09T22:38:44,341   copying skbio/app/util.py -> build/lib.linux-armv7l-3.9/skbio/app
2021-07-09T22:38:44,343   copying skbio/app/parameters.py -> build/lib.linux-armv7l-3.9/skbio/app
2021-07-09T22:38:44,347   creating build/lib.linux-armv7l-3.9/skbio/parse
2021-07-09T22:38:44,348   copying skbio/parse/record_finder.py -> build/lib.linux-armv7l-3.9/skbio/parse
2021-07-09T22:38:44,350   copying skbio/parse/record.py -> build/lib.linux-armv7l-3.9/skbio/parse
2021-07-09T22:38:44,353   copying skbio/parse/__init__.py -> build/lib.linux-armv7l-3.9/skbio/parse
2021-07-09T22:38:44,355   creating build/lib.linux-armv7l-3.9/skbio/draw
2021-07-09T22:38:44,356   copying skbio/draw/distributions.py -> build/lib.linux-armv7l-3.9/skbio/draw
2021-07-09T22:38:44,359   copying skbio/draw/__init__.py -> build/lib.linux-armv7l-3.9/skbio/draw
2021-07-09T22:38:44,361   creating build/lib.linux-armv7l-3.9/skbio/math
2021-07-09T22:38:44,362   copying skbio/math/subsample.py -> build/lib.linux-armv7l-3.9/skbio/math
2021-07-09T22:38:44,364   copying skbio/math/__init__.py -> build/lib.linux-armv7l-3.9/skbio/math
2021-07-09T22:38:44,366   copying skbio/math/gradient.py -> build/lib.linux-armv7l-3.9/skbio/math
2021-07-09T22:38:44,370   creating build/lib.linux-armv7l-3.9/skbio/core/alignment
2021-07-09T22:38:44,371   copying skbio/core/alignment/pairwise.py -> build/lib.linux-armv7l-3.9/skbio/core/alignment
2021-07-09T22:38:44,374   copying skbio/core/alignment/__init__.py -> build/lib.linux-armv7l-3.9/skbio/core/alignment
2021-07-09T22:38:44,376   copying skbio/core/alignment/alignment.py -> build/lib.linux-armv7l-3.9/skbio/core/alignment
2021-07-09T22:38:44,381   creating build/lib.linux-armv7l-3.9/skbio/core/tree
2021-07-09T22:38:44,382   copying skbio/core/tree/tree.py -> build/lib.linux-armv7l-3.9/skbio/core/tree
2021-07-09T22:38:44,386   copying skbio/core/tree/majority_rule.py -> build/lib.linux-armv7l-3.9/skbio/core/tree
2021-07-09T22:38:44,389   copying skbio/core/tree/_nj.py -> build/lib.linux-armv7l-3.9/skbio/core/tree
2021-07-09T22:38:44,391   copying skbio/core/tree/__init__.py -> build/lib.linux-armv7l-3.9/skbio/core/tree
2021-07-09T22:38:44,393   copying skbio/core/tree/trie.py -> build/lib.linux-armv7l-3.9/skbio/core/tree
2021-07-09T22:38:44,396   creating build/lib.linux-armv7l-3.9/skbio/core/tests
2021-07-09T22:38:44,397   copying skbio/core/tests/test_distance.py -> build/lib.linux-armv7l-3.9/skbio/core/tests
2021-07-09T22:38:44,400   copying skbio/core/tests/test_genetic_code.py -> build/lib.linux-armv7l-3.9/skbio/core/tests
2021-07-09T22:38:44,403   copying skbio/core/tests/test_workflow.py -> build/lib.linux-armv7l-3.9/skbio/core/tests
2021-07-09T22:38:44,405   copying skbio/core/tests/test_sequence.py -> build/lib.linux-armv7l-3.9/skbio/core/tests
2021-07-09T22:38:44,409   copying skbio/core/tests/__init__.py -> build/lib.linux-armv7l-3.9/skbio/core/tests
2021-07-09T22:38:44,411   creating build/lib.linux-armv7l-3.9/skbio/core/alignment/ssw
2021-07-09T22:38:44,412   copying skbio/core/alignment/ssw/__init__.py -> build/lib.linux-armv7l-3.9/skbio/core/alignment/ssw
2021-07-09T22:38:44,414   creating build/lib.linux-armv7l-3.9/skbio/core/alignment/tests
2021-07-09T22:38:44,415   copying skbio/core/alignment/tests/test_pairwise.py -> build/lib.linux-armv7l-3.9/skbio/core/alignment/tests
2021-07-09T22:38:44,418   copying skbio/core/alignment/tests/test_alignment.py -> build/lib.linux-armv7l-3.9/skbio/core/alignment/tests
2021-07-09T22:38:44,422   copying skbio/core/alignment/tests/__init__.py -> build/lib.linux-armv7l-3.9/skbio/core/alignment/tests
2021-07-09T22:38:44,424   creating build/lib.linux-armv7l-3.9/skbio/core/alignment/ssw/tests
2021-07-09T22:38:44,425   copying skbio/core/alignment/ssw/tests/test_ssw.py -> build/lib.linux-armv7l-3.9/skbio/core/alignment/ssw/tests
2021-07-09T22:38:44,429   copying skbio/core/alignment/ssw/tests/__init__.py -> build/lib.linux-armv7l-3.9/skbio/core/alignment/ssw/tests
2021-07-09T22:38:44,431   creating build/lib.linux-armv7l-3.9/skbio/core/tree/tests
2021-07-09T22:38:44,432   copying skbio/core/tree/tests/test_tree.py -> build/lib.linux-armv7l-3.9/skbio/core/tree/tests
2021-07-09T22:38:44,436   copying skbio/core/tree/tests/__init__.py -> build/lib.linux-armv7l-3.9/skbio/core/tree/tests
2021-07-09T22:38:44,438   copying skbio/core/tree/tests/test_nj.py -> build/lib.linux-armv7l-3.9/skbio/core/tree/tests
2021-07-09T22:38:44,440   copying skbio/core/tree/tests/test_trie.py -> build/lib.linux-armv7l-3.9/skbio/core/tree/tests
2021-07-09T22:38:44,443   copying skbio/core/tree/tests/test_majority_rule.py -> build/lib.linux-armv7l-3.9/skbio/core/tree/tests
2021-07-09T22:38:44,446   creating build/lib.linux-armv7l-3.9/skbio/format/sequences
2021-07-09T22:38:44,447   copying skbio/format/sequences/fasta.py -> build/lib.linux-armv7l-3.9/skbio/format/sequences
2021-07-09T22:38:44,450   copying skbio/format/sequences/fastq.py -> build/lib.linux-armv7l-3.9/skbio/format/sequences
2021-07-09T22:38:44,452   copying skbio/format/sequences/__init__.py -> build/lib.linux-armv7l-3.9/skbio/format/sequences
2021-07-09T22:38:44,454   creating build/lib.linux-armv7l-3.9/skbio/format/sequences/tests
2021-07-09T22:38:44,455   copying skbio/format/sequences/tests/test_fasta.py -> build/lib.linux-armv7l-3.9/skbio/format/sequences/tests
2021-07-09T22:38:44,457   copying skbio/format/sequences/tests/__init__.py -> build/lib.linux-armv7l-3.9/skbio/format/sequences/tests
2021-07-09T22:38:44,459   copying skbio/format/sequences/tests/test_fastq.py -> build/lib.linux-armv7l-3.9/skbio/format/sequences/tests
2021-07-09T22:38:44,461   creating build/lib.linux-armv7l-3.9/skbio/util/tests
2021-07-09T22:38:44,462   copying skbio/util/tests/test_testing.py -> build/lib.linux-armv7l-3.9/skbio/util/tests
2021-07-09T22:38:44,464   copying skbio/util/tests/test_io.py -> build/lib.linux-armv7l-3.9/skbio/util/tests
2021-07-09T22:38:44,465   copying skbio/util/tests/__init__.py -> build/lib.linux-armv7l-3.9/skbio/util/tests
2021-07-09T22:38:44,467   copying skbio/util/tests/test_misc.py -> build/lib.linux-armv7l-3.9/skbio/util/tests
2021-07-09T22:38:44,469   creating build/lib.linux-armv7l-3.9/skbio/app/tests
2021-07-09T22:38:44,470   copying skbio/app/tests/test_util.py -> build/lib.linux-armv7l-3.9/skbio/app/tests
2021-07-09T22:38:44,474   copying skbio/app/tests/test_parameters.py -> build/lib.linux-armv7l-3.9/skbio/app/tests
2021-07-09T22:38:44,477   copying skbio/app/tests/__init__.py -> build/lib.linux-armv7l-3.9/skbio/app/tests
2021-07-09T22:38:44,479   creating build/lib.linux-armv7l-3.9/skbio/parse/sequences
2021-07-09T22:38:44,480   copying skbio/parse/sequences/iterator.py -> build/lib.linux-armv7l-3.9/skbio/parse/sequences
2021-07-09T22:38:44,483   copying skbio/parse/sequences/fasta.py -> build/lib.linux-armv7l-3.9/skbio/parse/sequences
2021-07-09T22:38:44,485   copying skbio/parse/sequences/clustal.py -> build/lib.linux-armv7l-3.9/skbio/parse/sequences
2021-07-09T22:38:44,487   copying skbio/parse/sequences/factory.py -> build/lib.linux-armv7l-3.9/skbio/parse/sequences
2021-07-09T22:38:44,489   copying skbio/parse/sequences/fastq.py -> build/lib.linux-armv7l-3.9/skbio/parse/sequences
2021-07-09T22:38:44,491   copying skbio/parse/sequences/__init__.py -> build/lib.linux-armv7l-3.9/skbio/parse/sequences
2021-07-09T22:38:44,493   creating build/lib.linux-armv7l-3.9/skbio/parse/tests
2021-07-09T22:38:44,494   copying skbio/parse/tests/test_record_finder.py -> build/lib.linux-armv7l-3.9/skbio/parse/tests
2021-07-09T22:38:44,496   copying skbio/parse/tests/__init__.py -> build/lib.linux-armv7l-3.9/skbio/parse/tests
2021-07-09T22:38:44,498   copying skbio/parse/tests/test_record.py -> build/lib.linux-armv7l-3.9/skbio/parse/tests
2021-07-09T22:38:44,501   creating build/lib.linux-armv7l-3.9/skbio/parse/sequences/tests
2021-07-09T22:38:44,502   copying skbio/parse/sequences/tests/test_clustal.py -> build/lib.linux-armv7l-3.9/skbio/parse/sequences/tests
2021-07-09T22:38:44,504   copying skbio/parse/sequences/tests/test_factory.py -> build/lib.linux-armv7l-3.9/skbio/parse/sequences/tests
2021-07-09T22:38:44,507   copying skbio/parse/sequences/tests/test_fasta.py -> build/lib.linux-armv7l-3.9/skbio/parse/sequences/tests
2021-07-09T22:38:44,509   copying skbio/parse/sequences/tests/__init__.py -> build/lib.linux-armv7l-3.9/skbio/parse/sequences/tests
2021-07-09T22:38:44,510   copying skbio/parse/sequences/tests/test_fastq.py -> build/lib.linux-armv7l-3.9/skbio/parse/sequences/tests
2021-07-09T22:38:44,513   copying skbio/parse/sequences/tests/test_iterator.py -> build/lib.linux-armv7l-3.9/skbio/parse/sequences/tests
2021-07-09T22:38:44,516   creating build/lib.linux-armv7l-3.9/skbio/draw/tests
2021-07-09T22:38:44,516   copying skbio/draw/tests/test_distributions.py -> build/lib.linux-armv7l-3.9/skbio/draw/tests
2021-07-09T22:38:44,520   copying skbio/draw/tests/__init__.py -> build/lib.linux-armv7l-3.9/skbio/draw/tests
2021-07-09T22:38:44,522   creating build/lib.linux-armv7l-3.9/skbio/math/stats
2021-07-09T22:38:44,523   copying skbio/math/stats/spatial.py -> build/lib.linux-armv7l-3.9/skbio/math/stats
2021-07-09T22:38:44,525   copying skbio/math/stats/misc.py -> build/lib.linux-armv7l-3.9/skbio/math/stats
2021-07-09T22:38:44,527   copying skbio/math/stats/__init__.py -> build/lib.linux-armv7l-3.9/skbio/math/stats
2021-07-09T22:38:44,530   creating build/lib.linux-armv7l-3.9/skbio/math/diversity
2021-07-09T22:38:44,530   copying skbio/math/diversity/__init__.py -> build/lib.linux-armv7l-3.9/skbio/math/diversity
2021-07-09T22:38:44,533   creating build/lib.linux-armv7l-3.9/skbio/math/tests
2021-07-09T22:38:44,534   copying skbio/math/tests/test_subsample.py -> build/lib.linux-armv7l-3.9/skbio/math/tests
2021-07-09T22:38:44,536   copying skbio/math/tests/__init__.py -> build/lib.linux-armv7l-3.9/skbio/math/tests
2021-07-09T22:38:44,538   copying skbio/math/tests/test_gradient.py -> build/lib.linux-armv7l-3.9/skbio/math/tests
2021-07-09T22:38:44,543   creating build/lib.linux-armv7l-3.9/skbio/math/stats/distance
2021-07-09T22:38:44,544   copying skbio/math/stats/distance/base.py -> build/lib.linux-armv7l-3.9/skbio/math/stats/distance
2021-07-09T22:38:44,546   copying skbio/math/stats/distance/_bioenv.py -> build/lib.linux-armv7l-3.9/skbio/math/stats/distance
2021-07-09T22:38:44,548   copying skbio/math/stats/distance/permanova.py -> build/lib.linux-armv7l-3.9/skbio/math/stats/distance
2021-07-09T22:38:44,550   copying skbio/math/stats/distance/_mantel.py -> build/lib.linux-armv7l-3.9/skbio/math/stats/distance
2021-07-09T22:38:44,552   copying skbio/math/stats/distance/__init__.py -> build/lib.linux-armv7l-3.9/skbio/math/stats/distance
2021-07-09T22:38:44,555   copying skbio/math/stats/distance/anosim.py -> build/lib.linux-armv7l-3.9/skbio/math/stats/distance
2021-07-09T22:38:44,557   creating build/lib.linux-armv7l-3.9/skbio/math/stats/tests
2021-07-09T22:38:44,558   copying skbio/math/stats/tests/__init__.py -> build/lib.linux-armv7l-3.9/skbio/math/stats/tests
2021-07-09T22:38:44,560   copying skbio/math/stats/tests/test_misc.py -> build/lib.linux-armv7l-3.9/skbio/math/stats/tests
2021-07-09T22:38:44,561   copying skbio/math/stats/tests/test_spatial.py -> build/lib.linux-armv7l-3.9/skbio/math/stats/tests
2021-07-09T22:38:44,564   creating build/lib.linux-armv7l-3.9/skbio/math/stats/ordination
2021-07-09T22:38:44,565   copying skbio/math/stats/ordination/canonical_correspondence_analysis.py -> build/lib.linux-armv7l-3.9/skbio/math/stats/ordination
2021-07-09T22:38:44,568   copying skbio/math/stats/ordination/base.py -> build/lib.linux-armv7l-3.9/skbio/math/stats/ordination
2021-07-09T22:38:44,570   copying skbio/math/stats/ordination/principal_coordinate_analysis.py -> build/lib.linux-armv7l-3.9/skbio/math/stats/ordination
2021-07-09T22:38:44,572   copying skbio/math/stats/ordination/redundancy_analysis.py -> build/lib.linux-armv7l-3.9/skbio/math/stats/ordination
2021-07-09T22:38:44,574   copying skbio/math/stats/ordination/correspondence_analysis.py -> build/lib.linux-armv7l-3.9/skbio/math/stats/ordination
2021-07-09T22:38:44,577   copying skbio/math/stats/ordination/utils.py -> build/lib.linux-armv7l-3.9/skbio/math/stats/ordination
2021-07-09T22:38:44,579   copying skbio/math/stats/ordination/__init__.py -> build/lib.linux-armv7l-3.9/skbio/math/stats/ordination
2021-07-09T22:38:44,582   creating build/lib.linux-armv7l-3.9/skbio/math/stats/distance/tests
2021-07-09T22:38:44,583   copying skbio/math/stats/distance/tests/test_anosim.py -> build/lib.linux-armv7l-3.9/skbio/math/stats/distance/tests
2021-07-09T22:38:44,585   copying skbio/math/stats/distance/tests/test_mantel.py -> build/lib.linux-armv7l-3.9/skbio/math/stats/distance/tests
2021-07-09T22:38:44,588   copying skbio/math/stats/distance/tests/test_base.py -> build/lib.linux-armv7l-3.9/skbio/math/stats/distance/tests
2021-07-09T22:38:44,590   copying skbio/math/stats/distance/tests/__init__.py -> build/lib.linux-armv7l-3.9/skbio/math/stats/distance/tests
2021-07-09T22:38:44,592   copying skbio/math/stats/distance/tests/test_bioenv.py -> build/lib.linux-armv7l-3.9/skbio/math/stats/distance/tests
2021-07-09T22:38:44,594   copying skbio/math/stats/distance/tests/test_permanova.py -> build/lib.linux-armv7l-3.9/skbio/math/stats/distance/tests
2021-07-09T22:38:44,597   creating build/lib.linux-armv7l-3.9/skbio/math/stats/ordination/tests
2021-07-09T22:38:44,598   copying skbio/math/stats/ordination/tests/__init__.py -> build/lib.linux-armv7l-3.9/skbio/math/stats/ordination/tests
2021-07-09T22:38:44,600   copying skbio/math/stats/ordination/tests/test_ordination.py -> build/lib.linux-armv7l-3.9/skbio/math/stats/ordination/tests
2021-07-09T22:38:44,603   creating build/lib.linux-armv7l-3.9/skbio/math/diversity/beta
2021-07-09T22:38:44,604   copying skbio/math/diversity/beta/base.py -> build/lib.linux-armv7l-3.9/skbio/math/diversity/beta
2021-07-09T22:38:44,606   copying skbio/math/diversity/beta/__init__.py -> build/lib.linux-armv7l-3.9/skbio/math/diversity/beta
2021-07-09T22:38:44,609   creating build/lib.linux-armv7l-3.9/skbio/math/diversity/alpha
2021-07-09T22:38:44,610   copying skbio/math/diversity/alpha/chao1.py -> build/lib.linux-armv7l-3.9/skbio/math/diversity/alpha
2021-07-09T22:38:44,612   copying skbio/math/diversity/alpha/base.py -> build/lib.linux-armv7l-3.9/skbio/math/diversity/alpha
2021-07-09T22:38:44,615   copying skbio/math/diversity/alpha/lladser.py -> build/lib.linux-armv7l-3.9/skbio/math/diversity/alpha
2021-07-09T22:38:44,618   copying skbio/math/diversity/alpha/gini.py -> build/lib.linux-armv7l-3.9/skbio/math/diversity/alpha
2021-07-09T22:38:44,619   copying skbio/math/diversity/alpha/__init__.py -> build/lib.linux-armv7l-3.9/skbio/math/diversity/alpha
2021-07-09T22:38:44,622   copying skbio/math/diversity/alpha/ace.py -> build/lib.linux-armv7l-3.9/skbio/math/diversity/alpha
2021-07-09T22:38:44,624   creating build/lib.linux-armv7l-3.9/skbio/math/diversity/beta/tests
2021-07-09T22:38:44,625   copying skbio/math/diversity/beta/tests/test_base.py -> build/lib.linux-armv7l-3.9/skbio/math/diversity/beta/tests
2021-07-09T22:38:44,627   copying skbio/math/diversity/beta/tests/__init__.py -> build/lib.linux-armv7l-3.9/skbio/math/diversity/beta/tests
2021-07-09T22:38:44,630   creating build/lib.linux-armv7l-3.9/skbio/math/diversity/alpha/tests
2021-07-09T22:38:44,631   copying skbio/math/diversity/alpha/tests/test_gini.py -> build/lib.linux-armv7l-3.9/skbio/math/diversity/alpha/tests
2021-07-09T22:38:44,633   copying skbio/math/diversity/alpha/tests/test_base.py -> build/lib.linux-armv7l-3.9/skbio/math/diversity/alpha/tests
2021-07-09T22:38:44,635   copying skbio/math/diversity/alpha/tests/test_ace.py -> build/lib.linux-armv7l-3.9/skbio/math/diversity/alpha/tests
2021-07-09T22:38:44,637   copying skbio/math/diversity/alpha/tests/test_lladser.py -> build/lib.linux-armv7l-3.9/skbio/math/diversity/alpha/tests
2021-07-09T22:38:44,639   copying skbio/math/diversity/alpha/tests/__init__.py -> build/lib.linux-armv7l-3.9/skbio/math/diversity/alpha/tests
2021-07-09T22:38:44,641   copying skbio/math/diversity/alpha/tests/test_chao1.py -> build/lib.linux-armv7l-3.9/skbio/math/diversity/alpha/tests
2021-07-09T22:38:44,658   creating build/lib.linux-armv7l-3.9/skbio/core/tests/data
2021-07-09T22:38:44,659   copying skbio/core/tests/data/dm_3x3.txt -> build/lib.linux-armv7l-3.9/skbio/core/tests/data
2021-07-09T22:38:44,662   copying skbio/core/tests/data/bad_dm.txt -> build/lib.linux-armv7l-3.9/skbio/core/tests/data
2021-07-09T22:38:44,664   copying skbio/core/tests/data/dm_2x2_asym.txt -> build/lib.linux-armv7l-3.9/skbio/core/tests/data
2021-07-09T22:38:44,666   creating build/lib.linux-armv7l-3.9/skbio/parse/sequences/tests/data
2021-07-09T22:38:44,666   copying skbio/parse/sequences/tests/data/fq1.fq -> build/lib.linux-armv7l-3.9/skbio/parse/sequences/tests/data
2021-07-09T22:38:44,669   copying skbio/parse/sequences/tests/data/fq1.fastq.gz -> build/lib.linux-armv7l-3.9/skbio/parse/sequences/tests/data
2021-07-09T22:38:44,671   copying skbio/parse/sequences/tests/data/fna1.fna.gz -> build/lib.linux-armv7l-3.9/skbio/parse/sequences/tests/data
2021-07-09T22:38:44,672   copying skbio/parse/sequences/tests/data/fna1.fasta -> build/lib.linux-armv7l-3.9/skbio/parse/sequences/tests/data
2021-07-09T22:38:44,674   copying skbio/parse/sequences/tests/data/noextensionfasta -> build/lib.linux-armv7l-3.9/skbio/parse/sequences/tests/data
2021-07-09T22:38:44,676   copying skbio/parse/sequences/tests/data/fna1.qual -> build/lib.linux-armv7l-3.9/skbio/parse/sequences/tests/data
2021-07-09T22:38:44,678   creating build/lib.linux-armv7l-3.9/skbio/math/tests/data
2021-07-09T22:38:44,679   copying skbio/math/tests/data/gr_wo_msg_out -> build/lib.linux-armv7l-3.9/skbio/math/tests/data
2021-07-09T22:38:44,681   copying skbio/math/tests/data/vr_real_raw -> build/lib.linux-armv7l-3.9/skbio/math/tests/data
2021-07-09T22:38:44,684   copying skbio/math/tests/data/cr_no_data_raw -> build/lib.linux-armv7l-3.9/skbio/math/tests/data
2021-07-09T22:38:44,685   copying skbio/math/tests/data/vr_raw -> build/lib.linux-armv7l-3.9/skbio/math/tests/data
2021-07-09T22:38:44,687   copying skbio/math/tests/data/vr_out -> build/lib.linux-armv7l-3.9/skbio/math/tests/data
2021-07-09T22:38:44,689   copying skbio/math/tests/data/cr_no_data_out -> build/lib.linux-armv7l-3.9/skbio/math/tests/data
2021-07-09T22:38:44,691   copying skbio/math/tests/data/gr_w_msg_raw -> build/lib.linux-armv7l-3.9/skbio/math/tests/data
2021-07-09T22:38:44,694   copying skbio/math/tests/data/gr_w_msg_out -> build/lib.linux-armv7l-3.9/skbio/math/tests/data
2021-07-09T22:38:44,696   copying skbio/math/tests/data/vr_real_out -> build/lib.linux-armv7l-3.9/skbio/math/tests/data
2021-07-09T22:38:44,698   copying skbio/math/tests/data/cr_data_out -> build/lib.linux-armv7l-3.9/skbio/math/tests/data
2021-07-09T22:38:44,700   copying skbio/math/tests/data/gr_wo_msg_raw -> build/lib.linux-armv7l-3.9/skbio/math/tests/data
2021-07-09T22:38:44,702   copying skbio/math/tests/data/cr_data_raw -> build/lib.linux-armv7l-3.9/skbio/math/tests/data
2021-07-09T22:38:44,704   creating build/lib.linux-armv7l-3.9/skbio/math/stats/distance/tests/data
2021-07-09T22:38:44,705   copying skbio/math/stats/distance/tests/data/pwmantel_exp_results_reordered_distance_matrices.txt -> build/lib.linux-armv7l-3.9/skbio/math/stats/distance/tests/data
2021-07-09T22:38:44,707   copying skbio/math/stats/distance/tests/data/pwmantel_exp_results_minimal_with_labels.txt -> build/lib.linux-armv7l-3.9/skbio/math/stats/distance/tests/data
2021-07-09T22:38:44,709   copying skbio/math/stats/distance/tests/data/exp_results.txt -> build/lib.linux-armv7l-3.9/skbio/math/stats/distance/tests/data
2021-07-09T22:38:44,711   copying skbio/math/stats/distance/tests/data/dm_reordered.txt -> build/lib.linux-armv7l-3.9/skbio/math/stats/distance/tests/data
2021-07-09T22:38:44,714   copying skbio/math/stats/distance/tests/data/exp_results_different_column_order.txt -> build/lib.linux-armv7l-3.9/skbio/math/stats/distance/tests/data
2021-07-09T22:38:44,716   copying skbio/math/stats/distance/tests/data/df_extra_column.txt -> build/lib.linux-armv7l-3.9/skbio/math/stats/distance/tests/data
2021-07-09T22:38:44,718   copying skbio/math/stats/distance/tests/data/mantel_veg_dm_vegan.txt -> build/lib.linux-armv7l-3.9/skbio/math/stats/distance/tests/data
2021-07-09T22:38:44,721   copying skbio/math/stats/distance/tests/data/bioenv_exp_results_vegan.txt -> build/lib.linux-armv7l-3.9/skbio/math/stats/distance/tests/data
2021-07-09T22:38:44,723   copying skbio/math/stats/distance/tests/data/pwmantel_exp_results_duplicate_dms.txt -> build/lib.linux-armv7l-3.9/skbio/math/stats/distance/tests/data
2021-07-09T22:38:44,725   copying skbio/math/stats/distance/tests/data/mantel_env_dm_vegan.txt -> build/lib.linux-armv7l-3.9/skbio/math/stats/distance/tests/data
2021-07-09T22:38:44,728   copying skbio/math/stats/distance/tests/data/pwmantel_exp_results_na_p_value.txt -> build/lib.linux-armv7l-3.9/skbio/math/stats/distance/tests/data
2021-07-09T22:38:44,730   copying skbio/math/stats/distance/tests/data/pwmantel_exp_results_too_few_permutations.txt -> build/lib.linux-armv7l-3.9/skbio/math/stats/distance/tests/data
2021-07-09T22:38:44,732   copying skbio/math/stats/distance/tests/data/exp_results_single_column.txt -> build/lib.linux-armv7l-3.9/skbio/math/stats/distance/tests/data
2021-07-09T22:38:44,734   copying skbio/math/stats/distance/tests/data/bioenv_df_vegan.txt -> build/lib.linux-armv7l-3.9/skbio/math/stats/distance/tests/data
2021-07-09T22:38:44,736   copying skbio/math/stats/distance/tests/data/bioenv_dm_vegan.txt -> build/lib.linux-armv7l-3.9/skbio/math/stats/distance/tests/data
2021-07-09T22:38:44,739   copying skbio/math/stats/distance/tests/data/dm.txt -> build/lib.linux-armv7l-3.9/skbio/math/stats/distance/tests/data
2021-07-09T22:38:44,741   copying skbio/math/stats/distance/tests/data/df.txt -> build/lib.linux-armv7l-3.9/skbio/math/stats/distance/tests/data
2021-07-09T22:38:44,743   copying skbio/math/stats/distance/tests/data/pwmantel_exp_results_minimal.txt -> build/lib.linux-armv7l-3.9/skbio/math/stats/distance/tests/data
2021-07-09T22:38:44,746   creating build/lib.linux-armv7l-3.9/skbio/math/stats/ordination/tests/data
2021-07-09T22:38:44,746   copying skbio/math/stats/ordination/tests/data/example3_Y -> build/lib.linux-armv7l-3.9/skbio/math/stats/ordination/tests/data
2021-07-09T22:38:44,749   copying skbio/math/stats/ordination/tests/data/exp_OrdRes_RDA_site_constraints -> build/lib.linux-armv7l-3.9/skbio/math/stats/ordination/tests/data
2021-07-09T22:38:44,751   copying skbio/math/stats/ordination/tests/data/error3 -> build/lib.linux-armv7l-3.9/skbio/math/stats/ordination/tests/data
2021-07-09T22:38:44,754   copying skbio/math/stats/ordination/tests/data/example2_species_scaling1_from_vegan -> build/lib.linux-armv7l-3.9/skbio/math/stats/ordination/tests/data
2021-07-09T22:38:44,756   copying skbio/math/stats/ordination/tests/data/v_error8 -> build/lib.linux-armv7l-3.9/skbio/math/stats/ordination/tests/data
2021-07-09T22:38:44,758   copying skbio/math/stats/ordination/tests/data/v_error5 -> build/lib.linux-armv7l-3.9/skbio/math/stats/ordination/tests/data
2021-07-09T22:38:44,760   copying skbio/math/stats/ordination/tests/data/PCoA_sample_data -> build/lib.linux-armv7l-3.9/skbio/math/stats/ordination/tests/data
2021-07-09T22:38:44,763   copying skbio/math/stats/ordination/tests/data/error4 -> build/lib.linux-armv7l-3.9/skbio/math/stats/ordination/tests/data
2021-07-09T22:38:44,765   copying skbio/math/stats/ordination/tests/data/error6 -> build/lib.linux-armv7l-3.9/skbio/math/stats/ordination/tests/data
2021-07-09T22:38:44,768   copying skbio/math/stats/ordination/tests/data/exp_OrdRes_CCA_site_constraints -> build/lib.linux-armv7l-3.9/skbio/math/stats/ordination/tests/data
2021-07-09T22:38:44,770   copying skbio/math/stats/ordination/tests/data/v_error4 -> build/lib.linux-armv7l-3.9/skbio/math/stats/ordination/tests/data
2021-07-09T22:38:44,773   copying skbio/math/stats/ordination/tests/data/v_error3 -> build/lib.linux-armv7l-3.9/skbio/math/stats/ordination/tests/data
2021-07-09T22:38:44,775   copying skbio/math/stats/ordination/tests/data/error2 -> build/lib.linux-armv7l-3.9/skbio/math/stats/ordination/tests/data
2021-07-09T22:38:44,778   copying skbio/math/stats/ordination/tests/data/v_error9 -> build/lib.linux-armv7l-3.9/skbio/math/stats/ordination/tests/data
2021-07-09T22:38:44,780   copying skbio/math/stats/ordination/tests/data/exp_OrdRes_RDA_site -> build/lib.linux-armv7l-3.9/skbio/math/stats/ordination/tests/data
2021-07-09T22:38:44,783   copying skbio/math/stats/ordination/tests/data/example2_Y -> build/lib.linux-armv7l-3.9/skbio/math/stats/ordination/tests/data
2021-07-09T22:38:44,785   copying skbio/math/stats/ordination/tests/data/PCoA_sample_data_2 -> build/lib.linux-armv7l-3.9/skbio/math/stats/ordination/tests/data
2021-07-09T22:38:44,787   copying skbio/math/stats/ordination/tests/data/example2_species_scaling2_from_vegan -> build/lib.linux-armv7l-3.9/skbio/math/stats/ordination/tests/data
2021-07-09T22:38:44,789   copying skbio/math/stats/ordination/tests/data/error5 -> build/lib.linux-armv7l-3.9/skbio/math/stats/ordination/tests/data
2021-07-09T22:38:44,792   copying skbio/math/stats/ordination/tests/data/error1 -> build/lib.linux-armv7l-3.9/skbio/math/stats/ordination/tests/data
2021-07-09T22:38:44,794   copying skbio/math/stats/ordination/tests/data/error7 -> build/lib.linux-armv7l-3.9/skbio/math/stats/ordination/tests/data
2021-07-09T22:38:44,796   copying skbio/math/stats/ordination/tests/data/example3_X -> build/lib.linux-armv7l-3.9/skbio/math/stats/ordination/tests/data
2021-07-09T22:38:44,799   copying skbio/math/stats/ordination/tests/data/v_error2 -> build/lib.linux-armv7l-3.9/skbio/math/stats/ordination/tests/data
2021-07-09T22:38:44,801   copying skbio/math/stats/ordination/tests/data/exp_OrdRes_PCoA_site -> build/lib.linux-armv7l-3.9/skbio/math/stats/ordination/tests/data
2021-07-09T22:38:44,803   copying skbio/math/stats/ordination/tests/data/v_error6 -> build/lib.linux-armv7l-3.9/skbio/math/stats/ordination/tests/data
2021-07-09T22:38:44,805   copying skbio/math/stats/ordination/tests/data/v_error14 -> build/lib.linux-armv7l-3.9/skbio/math/stats/ordination/tests/data
2021-07-09T22:38:44,807   copying skbio/math/stats/ordination/tests/data/exp_PCoAzeros_site -> build/lib.linux-armv7l-3.9/skbio/math/stats/ordination/tests/data
2021-07-09T22:38:44,810   copying skbio/math/stats/ordination/tests/data/example2_X -> build/lib.linux-armv7l-3.9/skbio/math/stats/ordination/tests/data
2021-07-09T22:38:44,812   copying skbio/math/stats/ordination/tests/data/exp_PCoAEigenResults_site -> build/lib.linux-armv7l-3.9/skbio/math/stats/ordination/tests/data
2021-07-09T22:38:44,814   copying skbio/math/stats/ordination/tests/data/example2_site_scaling2_from_vegan -> build/lib.linux-armv7l-3.9/skbio/math/stats/ordination/tests/data
2021-07-09T22:38:44,816   copying skbio/math/stats/ordination/tests/data/example3_species_scaling2_from_vegan -> build/lib.linux-armv7l-3.9/skbio/math/stats/ordination/tests/data
2021-07-09T22:38:44,818   copying skbio/math/stats/ordination/tests/data/example3_site_scaling2_from_vegan -> build/lib.linux-armv7l-3.9/skbio/math/stats/ordination/tests/data
2021-07-09T22:38:44,820   copying skbio/math/stats/ordination/tests/data/example3_species_scaling1_from_vegan -> build/lib.linux-armv7l-3.9/skbio/math/stats/ordination/tests/data
2021-07-09T22:38:44,823   copying skbio/math/stats/ordination/tests/data/L&L_CA_data -> build/lib.linux-armv7l-3.9/skbio/math/stats/ordination/tests/data
2021-07-09T22:38:44,825   copying skbio/math/stats/ordination/tests/data/exp_OrdRes_CCA_site -> build/lib.linux-armv7l-3.9/skbio/math/stats/ordination/tests/data
2021-07-09T22:38:44,827   copying skbio/math/stats/ordination/tests/data/v_error7 -> build/lib.linux-armv7l-3.9/skbio/math/stats/ordination/tests/data
2021-07-09T22:38:44,829   copying skbio/math/stats/ordination/tests/data/v_error1 -> build/lib.linux-armv7l-3.9/skbio/math/stats/ordination/tests/data
2021-07-09T22:38:44,831   copying skbio/math/stats/ordination/tests/data/example3_site_scaling1_from_vegan -> build/lib.linux-armv7l-3.9/skbio/math/stats/ordination/tests/data
2021-07-09T22:38:44,833   copying skbio/math/stats/ordination/tests/data/v_error11 -> build/lib.linux-armv7l-3.9/skbio/math/stats/ordination/tests/data
2021-07-09T22:38:44,835   copying skbio/math/stats/ordination/tests/data/example3_scores -> build/lib.linux-armv7l-3.9/skbio/math/stats/ordination/tests/data
2021-07-09T22:38:44,838   copying skbio/math/stats/ordination/tests/data/PCoA_sample_data_3 -> build/lib.linux-armv7l-3.9/skbio/math/stats/ordination/tests/data
2021-07-09T22:38:44,840   copying skbio/math/stats/ordination/tests/data/exp_OrdRes_CCA_species -> build/lib.linux-armv7l-3.9/skbio/math/stats/ordination/tests/data
2021-07-09T22:38:44,842   copying skbio/math/stats/ordination/tests/data/L&L_CA_data_scores -> build/lib.linux-armv7l-3.9/skbio/math/stats/ordination/tests/data
2021-07-09T22:38:44,844   copying skbio/math/stats/ordination/tests/data/v_error13 -> build/lib.linux-armv7l-3.9/skbio/math/stats/ordination/tests/data
2021-07-09T22:38:44,847   copying skbio/math/stats/ordination/tests/data/v_error10 -> build/lib.linux-armv7l-3.9/skbio/math/stats/ordination/tests/data
2021-07-09T22:38:44,849   copying skbio/math/stats/ordination/tests/data/example2_site_scaling1_from_vegan -> build/lib.linux-armv7l-3.9/skbio/math/stats/ordination/tests/data
2021-07-09T22:38:44,851   copying skbio/math/stats/ordination/tests/data/v_error12 -> build/lib.linux-armv7l-3.9/skbio/math/stats/ordination/tests/data
2021-07-09T22:38:44,853   copying skbio/math/stats/ordination/tests/data/exp_OrdRes_RDA_species -> build/lib.linux-armv7l-3.9/skbio/math/stats/ordination/tests/data
2021-07-09T22:38:44,856   copying skbio/math/stats/ordination/tests/data/example2_scores -> build/lib.linux-armv7l-3.9/skbio/math/stats/ordination/tests/data
2021-07-09T22:38:44,858   copying skbio/math/stats/ordination/tests/data/PCoA_sample_data_3_scores -> build/lib.linux-armv7l-3.9/skbio/math/stats/ordination/tests/data
2021-07-09T22:38:44,882   running build_ext
2021-07-09T22:38:44,887   building 'skbio.math._subsample' extension
2021-07-09T22:38:44,888   creating build/temp.linux-armv7l-3.9
2021-07-09T22:38:44,888   creating build/temp.linux-armv7l-3.9/skbio
2021-07-09T22:38:44,888   creating build/temp.linux-armv7l-3.9/skbio/math
2021-07-09T22:38:44,889   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.9 -c skbio/math/_subsample.c -o build/temp.linux-armv7l-3.9/skbio/math/_subsample.o
2021-07-09T22:38:45,256   In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
2021-07-09T22:38:45,256                    from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2021-07-09T22:38:45,256                    from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
2021-07-09T22:38:45,257                    from skbio/math/_subsample.c:346:
2021-07-09T22:38:45,257   /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2021-07-09T22:38:45,257      17 | #warning "Using deprecated NumPy API, disable it with " \
2021-07-09T22:38:45,257         |  ^~~~~~~
2021-07-09T22:38:45,342   skbio/math/_subsample.c: In function ‘__Pyx_ParseOptionalKeywords’:
2021-07-09T22:38:45,344   skbio/math/_subsample.c:4145:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations]
2021-07-09T22:38:45,344    4145 |                     (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 :
2021-07-09T22:38:45,344         |                     ^
2021-07-09T22:38:45,344   In file included from /usr/include/python3.9/unicodeobject.h:1026,
2021-07-09T22:38:45,344                    from /usr/include/python3.9/Python.h:97,
2021-07-09T22:38:45,345                    from skbio/math/_subsample.c:16:
2021-07-09T22:38:45,345   /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here
2021-07-09T22:38:45,345     446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) {
2021-07-09T22:38:45,345         |                          ^~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-09T22:38:45,347   skbio/math/_subsample.c:4145:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations]
2021-07-09T22:38:45,347    4145 |                     (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 :
2021-07-09T22:38:45,347         |                     ^
2021-07-09T22:38:45,347   In file included from /usr/include/python3.9/unicodeobject.h:1026,
2021-07-09T22:38:45,347                    from /usr/include/python3.9/Python.h:97,
2021-07-09T22:38:45,347                    from skbio/math/_subsample.c:16:
2021-07-09T22:38:45,347   /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here
2021-07-09T22:38:45,347     580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode(
2021-07-09T22:38:45,348         |                                             ^~~~~~~~~~~~~~~~~~~
2021-07-09T22:38:45,349   skbio/math/_subsample.c:4145:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations]
2021-07-09T22:38:45,349    4145 |                     (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 :
2021-07-09T22:38:45,349         |                     ^
2021-07-09T22:38:45,349   In file included from /usr/include/python3.9/unicodeobject.h:1026,
2021-07-09T22:38:45,349                    from /usr/include/python3.9/Python.h:97,
2021-07-09T22:38:45,349                    from skbio/math/_subsample.c:16:
2021-07-09T22:38:45,350   /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here
2021-07-09T22:38:45,350     446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) {
2021-07-09T22:38:45,350         |                          ^~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-09T22:38:45,351   skbio/math/_subsample.c:4145:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations]
2021-07-09T22:38:45,351    4145 |                     (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 :
2021-07-09T22:38:45,351         |                     ^
2021-07-09T22:38:45,352   In file included from /usr/include/python3.9/unicodeobject.h:1026,
2021-07-09T22:38:45,352                    from /usr/include/python3.9/Python.h:97,
2021-07-09T22:38:45,352                    from skbio/math/_subsample.c:16:
2021-07-09T22:38:45,352   /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here
2021-07-09T22:38:45,352     446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) {
2021-07-09T22:38:45,352         |                          ^~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-09T22:38:45,353   skbio/math/_subsample.c:4145:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations]
2021-07-09T22:38:45,354    4145 |                     (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 :
2021-07-09T22:38:45,354         |                     ^
2021-07-09T22:38:45,354   In file included from /usr/include/python3.9/unicodeobject.h:1026,
2021-07-09T22:38:45,354                    from /usr/include/python3.9/Python.h:97,
2021-07-09T22:38:45,354                    from skbio/math/_subsample.c:16:
2021-07-09T22:38:45,354   /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here
2021-07-09T22:38:45,354     580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode(
2021-07-09T22:38:45,354         |                                             ^~~~~~~~~~~~~~~~~~~
2021-07-09T22:38:45,356   skbio/math/_subsample.c:4145:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations]
2021-07-09T22:38:45,356    4145 |                     (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 :
2021-07-09T22:38:45,356         |                     ^
2021-07-09T22:38:45,356   In file included from /usr/include/python3.9/unicodeobject.h:1026,
2021-07-09T22:38:45,356                    from /usr/include/python3.9/Python.h:97,
2021-07-09T22:38:45,356                    from skbio/math/_subsample.c:16:
2021-07-09T22:38:45,357   /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here
2021-07-09T22:38:45,357     446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) {
2021-07-09T22:38:45,357         |                          ^~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-09T22:38:45,359   skbio/math/_subsample.c:4161:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations]
2021-07-09T22:38:45,359    4161 |                         (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 :
2021-07-09T22:38:45,359         |                         ^
2021-07-09T22:38:45,359   In file included from /usr/include/python3.9/unicodeobject.h:1026,
2021-07-09T22:38:45,360                    from /usr/include/python3.9/Python.h:97,
2021-07-09T22:38:45,360                    from skbio/math/_subsample.c:16:
2021-07-09T22:38:45,360   /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here
2021-07-09T22:38:45,360     446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) {
2021-07-09T22:38:45,360         |                          ^~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-09T22:38:45,361   skbio/math/_subsample.c:4161:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations]
2021-07-09T22:38:45,361    4161 |                         (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 :
2021-07-09T22:38:45,361         |                         ^
2021-07-09T22:38:45,362   In file included from /usr/include/python3.9/unicodeobject.h:1026,
2021-07-09T22:38:45,362                    from /usr/include/python3.9/Python.h:97,
2021-07-09T22:38:45,362                    from skbio/math/_subsample.c:16:
2021-07-09T22:38:45,362   /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here
2021-07-09T22:38:45,362     580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode(
2021-07-09T22:38:45,362         |                                             ^~~~~~~~~~~~~~~~~~~
2021-07-09T22:38:45,363   skbio/math/_subsample.c:4161:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations]
2021-07-09T22:38:45,364    4161 |                         (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 :
2021-07-09T22:38:45,364         |                         ^
2021-07-09T22:38:45,364   In file included from /usr/include/python3.9/unicodeobject.h:1026,
2021-07-09T22:38:45,364                    from /usr/include/python3.9/Python.h:97,
2021-07-09T22:38:45,364                    from skbio/math/_subsample.c:16:
2021-07-09T22:38:45,364   /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here
2021-07-09T22:38:45,364     446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) {
2021-07-09T22:38:45,364         |                          ^~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-09T22:38:45,366   skbio/math/_subsample.c:4161:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations]
2021-07-09T22:38:45,366    4161 |                         (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 :
2021-07-09T22:38:45,366         |                         ^
2021-07-09T22:38:45,366   In file included from /usr/include/python3.9/unicodeobject.h:1026,
2021-07-09T22:38:45,366                    from /usr/include/python3.9/Python.h:97,
2021-07-09T22:38:45,366                    from skbio/math/_subsample.c:16:
2021-07-09T22:38:45,367   /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here
2021-07-09T22:38:45,367     446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) {
2021-07-09T22:38:45,367         |                          ^~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-09T22:38:45,368   skbio/math/_subsample.c:4161:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations]
2021-07-09T22:38:45,368    4161 |                         (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 :
2021-07-09T22:38:45,368         |                         ^
2021-07-09T22:38:45,368   In file included from /usr/include/python3.9/unicodeobject.h:1026,
2021-07-09T22:38:45,368                    from /usr/include/python3.9/Python.h:97,
2021-07-09T22:38:45,369                    from skbio/math/_subsample.c:16:
2021-07-09T22:38:45,369   /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here
2021-07-09T22:38:45,369     580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode(
2021-07-09T22:38:45,369         |                                             ^~~~~~~~~~~~~~~~~~~
2021-07-09T22:38:45,370   skbio/math/_subsample.c:4161:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations]
2021-07-09T22:38:45,370    4161 |                         (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 :
2021-07-09T22:38:45,371         |                         ^
2021-07-09T22:38:45,371   In file included from /usr/include/python3.9/unicodeobject.h:1026,
2021-07-09T22:38:45,371                    from /usr/include/python3.9/Python.h:97,
2021-07-09T22:38:45,371                    from skbio/math/_subsample.c:16:
2021-07-09T22:38:45,371   /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here
2021-07-09T22:38:45,371     446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) {
2021-07-09T22:38:45,371         |                          ^~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-09T22:38:45,485   In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:21,
2021-07-09T22:38:45,485                    from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
2021-07-09T22:38:45,486                    from skbio/math/_subsample.c:346:
2021-07-09T22:38:45,486   At top level:
2021-07-09T22:38:45,486   /usr/lib/python3/dist-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: ‘_import_array’ defined but not used [-Wunused-function]
2021-07-09T22:38:45,486    1463 | _import_array(void)
2021-07-09T22:38:45,486         | ^~~~~~~~~~~~~
2021-07-09T22:38:47,372   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/skbio/math/_subsample.o -o build/lib.linux-armv7l-3.9/skbio/math/_subsample.cpython-39-arm-linux-gnueabihf.so
2021-07-09T22:38:47,497   building 'skbio.core.alignment.ssw.ssw_wrapper' extension
2021-07-09T22:38:47,497   creating build/temp.linux-armv7l-3.9/skbio/core
2021-07-09T22:38:47,498   creating build/temp.linux-armv7l-3.9/skbio/core/alignment
2021-07-09T22:38:47,499   creating build/temp.linux-armv7l-3.9/skbio/core/alignment/ssw
2021-07-09T22:38:47,499   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.9 -c skbio/core/alignment/ssw/ssw.c -o build/temp.linux-armv7l-3.9/skbio/core/alignment/ssw/ssw.o
2021-07-09T22:38:47,554   skbio/core/alignment/ssw/ssw.c:38:10: fatal error: emmintrin.h: No such file or directory
2021-07-09T22:38:47,554      38 | #include <emmintrin.h>
2021-07-09T22:38:47,554         |          ^~~~~~~~~~~~~
2021-07-09T22:38:47,554   compilation terminated.
2021-07-09T22:38:47,558   error: command '/usr/bin/arm-linux-gnueabihf-gcc' failed with exit code 1
2021-07-09T22:38:47,675   Building wheel for scikit-bio (setup.py): finished with status 'error'
2021-07-09T22:38:47,676   ERROR: Failed building wheel for scikit-bio
2021-07-09T22:38:47,676   Running setup.py clean for scikit-bio
2021-07-09T22:38:47,677   Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-8bj_68u3/scikit-bio_78bb1bb4b9334c9fbf6cf1d15a7e3d33/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-8bj_68u3/scikit-bio_78bb1bb4b9334c9fbf6cf1d15a7e3d33/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' clean --all
2021-07-09T22:38:48,725   running clean
2021-07-09T22:38:48,727   removing 'build/temp.linux-armv7l-3.9' (and everything under it)
2021-07-09T22:38:48,732   removing 'build/lib.linux-armv7l-3.9' (and everything under it)
2021-07-09T22:38:48,836   'build/bdist.linux-armv7l' does not exist -- can't clean it
2021-07-09T22:38:48,837   'build/scripts-3.9' does not exist -- can't clean it
2021-07-09T22:38:48,837   removing 'build'
2021-07-09T22:38:48,926 Failed to build scikit-bio
2021-07-09T22:38:48,927 ERROR: Failed to build one or more wheels
2021-07-09T22:38:48,927 Exception information:
2021-07-09T22:38:48,927 Traceback (most recent call last):
2021-07-09T22:38:48,927   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/cli/base_command.py", line 180, in _main
2021-07-09T22:38:48,927     status = self.run(options, args)
2021-07-09T22:38:48,927   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/cli/req_command.py", line 205, in wrapper
2021-07-09T22:38:48,927     return func(self, options, args)
2021-07-09T22:38:48,927   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/commands/wheel.py", line 174, in run
2021-07-09T22:38:48,927     raise CommandError(
2021-07-09T22:38:48,927 pip._internal.exceptions.CommandError: Failed to build one or more wheels
2021-07-09T22:38:48,930 Removed build tracker: '/tmp/pip-req-tracker-t7pkoh5t'