2021-07-09T23:55:09,204 Created temporary directory: /tmp/pip-ephem-wheel-cache-1ne9c7xb
2021-07-09T23:55:09,207 Created temporary directory: /tmp/pip-req-tracker-3mc4or55
2021-07-09T23:55:09,208 Initialized build tracking at /tmp/pip-req-tracker-3mc4or55
2021-07-09T23:55:09,208 Created build tracker: /tmp/pip-req-tracker-3mc4or55
2021-07-09T23:55:09,208 Entered build tracker: /tmp/pip-req-tracker-3mc4or55
2021-07-09T23:55:09,209 Created temporary directory: /tmp/pip-wheel-dd0a0t86
2021-07-09T23:55:09,241 1 location(s) to search for versions of yahmm:
2021-07-09T23:55:09,241 * https://pypi.org/simple/yahmm/
2021-07-09T23:55:09,242 Fetching project page and analyzing links: https://pypi.org/simple/yahmm/
2021-07-09T23:55:09,242 Getting page https://pypi.org/simple/yahmm/
2021-07-09T23:55:09,244 Found index url https://pypi.org/simple
2021-07-09T23:55:09,337   Found link https://files.pythonhosted.org/packages/b1/78/4aea65945311b4389eda0fd50e89c1920e4fc7178ebbfbb882efe5cba28a/yahmm-0.1.1.zip#sha256=a6f8e6339aebd84696ba9d78ad3fa25f4201c0dc2dedf137b5ff44d4c92a8e9b (from https://pypi.org/simple/yahmm/), version: 0.1.1
2021-07-09T23:55:09,337   Found link https://files.pythonhosted.org/packages/fc/86/47294c4be8b1038ffa2c40a78cc294e3bd5f80307071c8bc50c81ef70bea/yahmm-0.1.2.zip#sha256=0a3c278592c62fea5df737406e593f58115a1b64d706a6bb3a2b09cfaea46169 (from https://pypi.org/simple/yahmm/), version: 0.1.2
2021-07-09T23:55:09,337   Found link https://files.pythonhosted.org/packages/a3/26/08dff5683a79f1d245e9e8a390af3f9592a10802b17e628eb7e421742eaf/yahmm-0.1.3.zip#sha256=e7e6ab08fd6a779d5549becfe1854847134812a69a47a453cd16e8385783e015 (from https://pypi.org/simple/yahmm/), version: 0.1.3
2021-07-09T23:55:09,338   Found link https://files.pythonhosted.org/packages/e4/69/0998576a91e272d958f3b2c0bc3b7a8938734a7dfc50e4019fc20e675b20/yahmm-0.1.4.zip#sha256=74e6fd151e9e617a770e9d7474b400df94aa175e1178c69bb021a06b82c09f7b (from https://pypi.org/simple/yahmm/), version: 0.1.4
2021-07-09T23:55:09,338   Found link https://files.pythonhosted.org/packages/cd/aa/cf6987e62404b9c2c99cbadd9343504b49ca0926be2aa4e53cea83d17be3/yahmm-0.1.5.zip#sha256=c41d1dcf390a68451fa1fa123cb2477d5d04674d8d8f4b39e976545ce1831957 (from https://pypi.org/simple/yahmm/), version: 0.1.5
2021-07-09T23:55:09,338   Found link https://files.pythonhosted.org/packages/0d/52/2926c55a677c2cf4cb7156e51b19d7fb8c9ebbaebe10fa3a2753d94a1a3a/yahmm-1.0.0.zip#sha256=e157498e5302e64d389d0763db1d3feb849d569486d61df97a8a4237929ff87d (from https://pypi.org/simple/yahmm/), version: 1.0.0
2021-07-09T23:55:09,339   Found link https://files.pythonhosted.org/packages/e9/fb/5bdc225c63148cac65970f66d03190fc7fe6b100722cbde76a475fe74d8a/yahmm-1.1.0.zip#sha256=c6654b6f37d18f27067dcebf0406e26660f431d55c5ace3823c0e7cf0f814ff9 (from https://pypi.org/simple/yahmm/), version: 1.1.0
2021-07-09T23:55:09,339   Found link https://files.pythonhosted.org/packages/f9/2a/0f49c0151cfe54f4fd65af862ac45c9770b857985ad10838fe3fcdde5d0c/yahmm-1.1.1.zip#sha256=92a95d96011df5181ee8e4a5141541d89de93744e780c3f8b3ecfec9a5345fa0 (from https://pypi.org/simple/yahmm/), version: 1.1.1
2021-07-09T23:55:09,339   Found link https://files.pythonhosted.org/packages/a5/c1/ef680ccec7351032ae825ef725599ed057c5df603fbe4a14ec27c3db3b4a/yahmm-1.1.2.zip#sha256=5e81077323dc6da9fb792169b639f29e5293b0c8272e4c22b204ca95ac0df90a (from https://pypi.org/simple/yahmm/), version: 1.1.2
2021-07-09T23:55:09,339   Found link https://files.pythonhosted.org/packages/48/d4/35c1d2fa6fd719ccbc8b69e3af1f1633b5b173d2ee86b109b7b89c353bb7/yahmm-1.1.3.zip#sha256=fe3614ef96da9410468976756fb93dc8235485242c05df01d8e5ed356a7dfb43 (from https://pypi.org/simple/yahmm/), version: 1.1.3
2021-07-09T23:55:09,340 Skipping link: not a file: https://pypi.org/simple/yahmm/
2021-07-09T23:55:09,357 Given no hashes to check 1 links for project 'yahmm': discarding no candidates
2021-07-09T23:55:09,374 Collecting yahmm==1.0.0
2021-07-09T23:55:09,376   Created temporary directory: /tmp/pip-unpack-pio4agp7
2021-07-09T23:55:09,566   Downloading yahmm-1.0.0.zip (38 kB)
2021-07-09T23:55:09,608   Added yahmm==1.0.0 from https://files.pythonhosted.org/packages/0d/52/2926c55a677c2cf4cb7156e51b19d7fb8c9ebbaebe10fa3a2753d94a1a3a/yahmm-1.0.0.zip#sha256=e157498e5302e64d389d0763db1d3feb849d569486d61df97a8a4237929ff87d to build tracker '/tmp/pip-req-tracker-3mc4or55'
2021-07-09T23:55:09,609     Running setup.py (path:/tmp/pip-wheel-dd0a0t86/yahmm_8cff9880009f4d1aa5d8d1c303af83a4/setup.py) egg_info for package yahmm
2021-07-09T23:55:09,610     Created temporary directory: /tmp/pip-pip-egg-info-zq77pqnq
2021-07-09T23:55:09,610     Running command python setup.py egg_info
2021-07-09T23:55:10,735     running egg_info
2021-07-09T23:55:10,737     creating /tmp/pip-pip-egg-info-zq77pqnq/yahmm.egg-info
2021-07-09T23:55:10,738     writing /tmp/pip-pip-egg-info-zq77pqnq/yahmm.egg-info/PKG-INFO
2021-07-09T23:55:10,741     writing dependency_links to /tmp/pip-pip-egg-info-zq77pqnq/yahmm.egg-info/dependency_links.txt
2021-07-09T23:55:10,743     writing requirements to /tmp/pip-pip-egg-info-zq77pqnq/yahmm.egg-info/requires.txt
2021-07-09T23:55:10,744     writing top-level names to /tmp/pip-pip-egg-info-zq77pqnq/yahmm.egg-info/top_level.txt
2021-07-09T23:55:10,745     writing manifest file '/tmp/pip-pip-egg-info-zq77pqnq/yahmm.egg-info/SOURCES.txt'
2021-07-09T23:55:10,901     reading manifest file '/tmp/pip-pip-egg-info-zq77pqnq/yahmm.egg-info/SOURCES.txt'
2021-07-09T23:55:10,903     adding license file 'LICENSE.txt'
2021-07-09T23:55:10,905     writing manifest file '/tmp/pip-pip-egg-info-zq77pqnq/yahmm.egg-info/SOURCES.txt'
2021-07-09T23:55:11,000   Source in /tmp/pip-wheel-dd0a0t86/yahmm_8cff9880009f4d1aa5d8d1c303af83a4 has version 1.0.0, which satisfies requirement yahmm==1.0.0 from https://files.pythonhosted.org/packages/0d/52/2926c55a677c2cf4cb7156e51b19d7fb8c9ebbaebe10fa3a2753d94a1a3a/yahmm-1.0.0.zip#sha256=e157498e5302e64d389d0763db1d3feb849d569486d61df97a8a4237929ff87d
2021-07-09T23:55:11,001   Removed yahmm==1.0.0 from https://files.pythonhosted.org/packages/0d/52/2926c55a677c2cf4cb7156e51b19d7fb8c9ebbaebe10fa3a2753d94a1a3a/yahmm-1.0.0.zip#sha256=e157498e5302e64d389d0763db1d3feb849d569486d61df97a8a4237929ff87d from build tracker '/tmp/pip-req-tracker-3mc4or55'
2021-07-09T23:55:11,005 Created temporary directory: /tmp/pip-unpack-56mrrdwq
2021-07-09T23:55:11,006 Building wheels for collected packages: yahmm
2021-07-09T23:55:11,010   Created temporary directory: /tmp/pip-wheel-s4fxdloj
2021-07-09T23:55:11,010   Building wheel for yahmm (setup.py): started
2021-07-09T23:55:11,011   Destination directory: /tmp/pip-wheel-s4fxdloj
2021-07-09T23:55:11,011   Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-dd0a0t86/yahmm_8cff9880009f4d1aa5d8d1c303af83a4/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-dd0a0t86/yahmm_8cff9880009f4d1aa5d8d1c303af83a4/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-s4fxdloj
2021-07-09T23:55:12,164   running bdist_wheel
2021-07-09T23:55:12,168   running build
2021-07-09T23:55:12,169   running build_py
2021-07-09T23:55:12,303   creating build
2021-07-09T23:55:12,303   creating build/lib.linux-armv7l-3.9
2021-07-09T23:55:12,304   creating build/lib.linux-armv7l-3.9/yahmm
2021-07-09T23:55:12,305   copying yahmm/__init__.py -> build/lib.linux-armv7l-3.9/yahmm
2021-07-09T23:55:12,307   running build_ext
2021-07-09T23:55:12,368   cythoning yahmm/yahmm.pyx to yahmm/yahmm.c
2021-07-09T23:55:12,995   /usr/local/lib/python3.9/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-dd0a0t86/yahmm_8cff9880009f4d1aa5d8d1c303af83a4/yahmm/yahmm.pyx
2021-07-09T23:55:12,995     tree = Parsing.p_module(s, pxd, full_module_name)
2021-07-09T23:55:20,505   warning: yahmm/yahmm.pyx:1401:40: Index should be typed for more efficient access

2021-07-09T23:55:20,743   Error compiling Cython file:
2021-07-09T23:55:20,743   ------------------------------------------------------------
2021-07-09T23:55:20,743   ...
2021-07-09T23:55:20,743   			# list of tuples of sequence, path pairs, not a list of sequences.
2021-07-09T23:55:20,743   			# The log probability sum is the log-sum-exp of the log
2021-07-09T23:55:20,744   			# probabilities of all members of the sequence. In this case,
2021-07-09T23:55:20,744   			# sequences is made up of ( sequence, path ) tuples, instead of
2021-07-09T23:55:20,744   			# just sequences.
2021-07-09T23:55:20,744   			log_probability_sum = reduce( lambda x, y: pair_lse( x, y ),
2021-07-09T23:55:20,744                           ^
2021-07-09T23:55:20,744   ------------------------------------------------------------

2021-07-09T23:55:20,744   yahmm/yahmm.pyx:3154:25: undeclared name not builtin: reduce
2021-07-09T23:55:24,638   building 'yahmm.yahmm' extension
2021-07-09T23:55:24,638   creating build/temp.linux-armv7l-3.9
2021-07-09T23:55:24,638   creating build/temp.linux-armv7l-3.9/yahmm
2021-07-09T23:55:24,639   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c yahmm/yahmm.c -o build/temp.linux-armv7l-3.9/yahmm/yahmm.o
2021-07-09T23:55:24,697   yahmm/yahmm.c:1:2: error: #error Do not use this file, it is the result of a failed Cython compilation.
2021-07-09T23:55:24,697       1 | #error Do not use this file, it is the result of a failed Cython compilation.
2021-07-09T23:55:24,697         |  ^~~~~
2021-07-09T23:55:24,701   error: command '/usr/bin/arm-linux-gnueabihf-gcc' failed with exit code 1
2021-07-09T23:55:25,257   Building wheel for yahmm (setup.py): finished with status 'error'
2021-07-09T23:55:25,258   ERROR: Failed building wheel for yahmm
2021-07-09T23:55:25,259   Running setup.py clean for yahmm
2021-07-09T23:55:25,259   Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-dd0a0t86/yahmm_8cff9880009f4d1aa5d8d1c303af83a4/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-dd0a0t86/yahmm_8cff9880009f4d1aa5d8d1c303af83a4/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' clean --all
2021-07-09T23:55:26,384   running clean
2021-07-09T23:55:26,386   removing 'build/temp.linux-armv7l-3.9' (and everything under it)
2021-07-09T23:55:26,388   removing 'build/lib.linux-armv7l-3.9' (and everything under it)
2021-07-09T23:55:26,390   'build/bdist.linux-armv7l' does not exist -- can't clean it
2021-07-09T23:55:26,390   'build/scripts-3.9' does not exist -- can't clean it
2021-07-09T23:55:26,390   removing 'build'
2021-07-09T23:55:26,477 Failed to build yahmm
2021-07-09T23:55:26,477 ERROR: Failed to build one or more wheels
2021-07-09T23:55:26,478 Exception information:
2021-07-09T23:55:26,478 Traceback (most recent call last):
2021-07-09T23:55:26,478   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/cli/base_command.py", line 180, in _main
2021-07-09T23:55:26,478     status = self.run(options, args)
2021-07-09T23:55:26,478   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/cli/req_command.py", line 205, in wrapper
2021-07-09T23:55:26,478     return func(self, options, args)
2021-07-09T23:55:26,478   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/commands/wheel.py", line 174, in run
2021-07-09T23:55:26,478     raise CommandError(
2021-07-09T23:55:26,478 pip._internal.exceptions.CommandError: Failed to build one or more wheels
2021-07-09T23:55:26,481 Removed build tracker: '/tmp/pip-req-tracker-3mc4or55'