2021-07-10T02:40:37,227 Created temporary directory: /tmp/pip-ephem-wheel-cache-uxxrf5an 2021-07-10T02:40:37,231 Created temporary directory: /tmp/pip-req-tracker-reeqeh96 2021-07-10T02:40:37,231 Initialized build tracking at /tmp/pip-req-tracker-reeqeh96 2021-07-10T02:40:37,231 Created build tracker: /tmp/pip-req-tracker-reeqeh96 2021-07-10T02:40:37,231 Entered build tracker: /tmp/pip-req-tracker-reeqeh96 2021-07-10T02:40:37,232 Created temporary directory: /tmp/pip-wheel-_sfyu3ly 2021-07-10T02:40:37,266 1 location(s) to search for versions of rnacounter: 2021-07-10T02:40:37,266 * https://pypi.org/simple/rnacounter/ 2021-07-10T02:40:37,267 Fetching project page and analyzing links: https://pypi.org/simple/rnacounter/ 2021-07-10T02:40:37,267 Getting page https://pypi.org/simple/rnacounter/ 2021-07-10T02:40:37,269 Found index url https://pypi.org/simple 2021-07-10T02:40:37,362 Found link https://files.pythonhosted.org/packages/8f/49/762bb78c6a1215e30ccd9702444375015a50b14847266db0c2f11219e78f/rnacounter-1.1.2.tar.gz#sha256=7e542679e8e9c80380d63e1a60d9131572a3e0569f6058af572574a7f4d55856 (from https://pypi.org/simple/rnacounter/), version: 1.1.2 2021-07-10T02:40:37,362 Found link https://files.pythonhosted.org/packages/04/c4/e2924af98cbf63c98cc5a9d210c3c54d959cf961fba4df5da3972afc84ae/rnacounter-1.1.3.1.tar.gz#sha256=6f87205f96cbe5e9ae2c0833f75e66f84ab036a389cf229887fbb9ab76bc845a (from https://pypi.org/simple/rnacounter/), version: 1.1.3.1 2021-07-10T02:40:37,363 Found link https://files.pythonhosted.org/packages/39/70/41efc4ca6703ffdbdbab1dcd66976ed9a30c363b6f5ba417501e2dd9fb00/rnacounter-1.1.3.2.tar.gz#sha256=faa4afc97daeea8658666a11a89c5671845acdeee998da950f4afdd887e60119 (from https://pypi.org/simple/rnacounter/), version: 1.1.3.2 2021-07-10T02:40:37,363 Found link https://files.pythonhosted.org/packages/b1/1c/9f8deaa78b994019b9024043168567099fe010c79018373e2f6ed60ea646/rnacounter-1.1.3.7.tar.gz#sha256=95aade7f65f42577e8f6a2ef586b82e298a761d7e74d216d5405d10b626de880 (from https://pypi.org/simple/rnacounter/), version: 1.1.3.7 2021-07-10T02:40:37,363 Found link https://files.pythonhosted.org/packages/14/a1/be9b12f40d130b182ed0d5d01b36f76e6089805a5c945d77941f5eb0928e/rnacounter-1.1.3.10.tar.gz#sha256=0411fcc0609563a01fb0c735dc70293898fb773ae63484ce248395327cbe2716 (from https://pypi.org/simple/rnacounter/), version: 1.1.3.10 2021-07-10T02:40:37,364 Found link https://files.pythonhosted.org/packages/8a/5e/1b112fc6343bf52ace3a9afaa30eabaf4338afadabf1fb97454a7556b835/rnacounter-1.2.tar.gz#sha256=d63cb98d0aa90339c2dbe27741a361f9778e9617585e04a35d078421e364ba0d (from https://pypi.org/simple/rnacounter/), version: 1.2 2021-07-10T02:40:37,364 Found link https://files.pythonhosted.org/packages/05/7d/42ecc29d98f52b77953a55da4836d36d534b317b4d66af971c9008804b61/rnacounter-1.2.1.tar.gz#sha256=cabc26fa3c1166cb190a94a4e0e642dce8747cc00bc07041a34fd895ef154b52 (from https://pypi.org/simple/rnacounter/), version: 1.2.1 2021-07-10T02:40:37,364 Found link https://files.pythonhosted.org/packages/dd/92/d53ee16c942fb78a312c03b22b0ddc08eb00ae4627f9125415a2c650b674/rnacounter-1.3.tar.gz#sha256=c45a5ae11e5a1a259d522054c688396df15d700b8389fca064e8d5fd4ee3e0f8 (from https://pypi.org/simple/rnacounter/), version: 1.3 2021-07-10T02:40:37,364 Found link https://files.pythonhosted.org/packages/49/18/a50e0e2b164272f6d13f458b43d6851766cf121b5672de12078df2bb953a/rnacounter-1.3.1.tar.gz#sha256=6a445bf59d0939a9ddf443a65402b2df6384acbfa9951c313b0c942d33ef23ce (from https://pypi.org/simple/rnacounter/), version: 1.3.1 2021-07-10T02:40:37,365 Found link https://files.pythonhosted.org/packages/ab/bf/54a012d6660528530b8404401bf494bda91947e38aae0d45ba4d721de6d4/rnacounter-1.4.tar.gz#sha256=48ef01f0d77a856dd9e9106a9185e996418366744b0950f8bc33bf2efaedb0b3 (from https://pypi.org/simple/rnacounter/), version: 1.4 2021-07-10T02:40:37,365 Found link https://files.pythonhosted.org/packages/84/c0/8f274da33c177f6a7c6d8632d9e99413c83e6ec688825677acace41cfdb1/rnacounter-1.4.1.tar.gz#sha256=09de574fc0432a31fa66a390e3f74cf5a1fff0b5089f60a70066b75f0da427b2 (from https://pypi.org/simple/rnacounter/), version: 1.4.1 2021-07-10T02:40:37,365 Found link https://files.pythonhosted.org/packages/45/3a/3cc530b864e9fbd87542c73df418d091aeaeb7b73863fb206e62494d988e/rnacounter-1.4.2.tar.gz#sha256=b38e8e2da5d5642d19104e94763ec61bc48df4150ccd1d65250d1ac15b0fb8e0 (from https://pypi.org/simple/rnacounter/), version: 1.4.2 2021-07-10T02:40:37,366 Found link https://files.pythonhosted.org/packages/46/ee/29eed438b10276db92163dff3d25bcb91f3f9e99d9a629c35ddb97f27f4d/rnacounter-1.5.tar.gz#sha256=161cf00a14dabb7bd77ec61a2d4ba13f3e88df59b02c8e9742973df7e521fb6a (from https://pypi.org/simple/rnacounter/), version: 1.5 2021-07-10T02:40:37,366 Found link https://files.pythonhosted.org/packages/a2/ea/657e7b7aa7d777173695606509933b52d794b7dbb79501a87bfea2fb511f/rnacounter-1.5.2.tar.gz#sha256=7bcb98bbde40529d94df1fb803a014ad90deff36ed0bc52781b223c7325ec84e (from https://pypi.org/simple/rnacounter/), version: 1.5.2 2021-07-10T02:40:37,367 Skipping link: not a file: https://pypi.org/simple/rnacounter/ 2021-07-10T02:40:37,386 Given no hashes to check 1 links for project 'rnacounter': discarding no candidates 2021-07-10T02:40:37,405 Collecting rnacounter==1.4.1 2021-07-10T02:40:37,406 Created temporary directory: /tmp/pip-unpack-8ybr6jqf 2021-07-10T02:40:37,780 Downloading rnacounter-1.4.1.tar.gz (301 kB) 2021-07-10T02:40:38,010 Added rnacounter==1.4.1 from https://files.pythonhosted.org/packages/84/c0/8f274da33c177f6a7c6d8632d9e99413c83e6ec688825677acace41cfdb1/rnacounter-1.4.1.tar.gz#sha256=09de574fc0432a31fa66a390e3f74cf5a1fff0b5089f60a70066b75f0da427b2 to build tracker '/tmp/pip-req-tracker-reeqeh96' 2021-07-10T02:40:38,011 Running setup.py (path:/tmp/pip-wheel-_sfyu3ly/rnacounter_02b336046beb4e22bf3b5ab081dfde03/setup.py) egg_info for package rnacounter 2021-07-10T02:40:38,012 Created temporary directory: /tmp/pip-pip-egg-info-3w5pxjys 2021-07-10T02:40:38,012 Running command python setup.py egg_info 2021-07-10T02:40:39,086 running egg_info 2021-07-10T02:40:39,088 creating /tmp/pip-pip-egg-info-3w5pxjys/rnacounter.egg-info 2021-07-10T02:40:39,088 writing /tmp/pip-pip-egg-info-3w5pxjys/rnacounter.egg-info/PKG-INFO 2021-07-10T02:40:39,091 writing dependency_links to /tmp/pip-pip-egg-info-3w5pxjys/rnacounter.egg-info/dependency_links.txt 2021-07-10T02:40:39,093 writing requirements to /tmp/pip-pip-egg-info-3w5pxjys/rnacounter.egg-info/requires.txt 2021-07-10T02:40:39,094 writing top-level names to /tmp/pip-pip-egg-info-3w5pxjys/rnacounter.egg-info/top_level.txt 2021-07-10T02:40:39,096 writing manifest file '/tmp/pip-pip-egg-info-3w5pxjys/rnacounter.egg-info/SOURCES.txt' 2021-07-10T02:40:39,440 reading manifest file '/tmp/pip-pip-egg-info-3w5pxjys/rnacounter.egg-info/SOURCES.txt' 2021-07-10T02:40:39,441 reading manifest template 'MANIFEST.in' 2021-07-10T02:40:39,448 writing manifest file '/tmp/pip-pip-egg-info-3w5pxjys/rnacounter.egg-info/SOURCES.txt' 2021-07-10T02:40:39,550 Source in /tmp/pip-wheel-_sfyu3ly/rnacounter_02b336046beb4e22bf3b5ab081dfde03 has version 1.4.1, which satisfies requirement rnacounter==1.4.1 from https://files.pythonhosted.org/packages/84/c0/8f274da33c177f6a7c6d8632d9e99413c83e6ec688825677acace41cfdb1/rnacounter-1.4.1.tar.gz#sha256=09de574fc0432a31fa66a390e3f74cf5a1fff0b5089f60a70066b75f0da427b2 2021-07-10T02:40:39,551 Removed rnacounter==1.4.1 from https://files.pythonhosted.org/packages/84/c0/8f274da33c177f6a7c6d8632d9e99413c83e6ec688825677acace41cfdb1/rnacounter-1.4.1.tar.gz#sha256=09de574fc0432a31fa66a390e3f74cf5a1fff0b5089f60a70066b75f0da427b2 from build tracker '/tmp/pip-req-tracker-reeqeh96' 2021-07-10T02:40:39,556 Created temporary directory: /tmp/pip-unpack-8ti2q3qo 2021-07-10T02:40:39,556 Building wheels for collected packages: rnacounter 2021-07-10T02:40:39,560 Created temporary directory: /tmp/pip-wheel-txp2bn0n 2021-07-10T02:40:39,560 Building wheel for rnacounter (setup.py): started 2021-07-10T02:40:39,561 Destination directory: /tmp/pip-wheel-txp2bn0n 2021-07-10T02:40:39,561 Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-_sfyu3ly/rnacounter_02b336046beb4e22bf3b5ab081dfde03/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-_sfyu3ly/rnacounter_02b336046beb4e22bf3b5ab081dfde03/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-txp2bn0n 2021-07-10T02:40:40,623 running bdist_wheel 2021-07-10T02:40:40,813 running build 2021-07-10T02:40:40,813 running build_py 2021-07-10T02:40:40,947 creating build 2021-07-10T02:40:40,948 creating build/lib.linux-armv7l-3.9 2021-07-10T02:40:40,948 creating build/lib.linux-armv7l-3.9/rnacounter 2021-07-10T02:40:40,949 copying rnacounter/__init__.py -> build/lib.linux-armv7l-3.9/rnacounter 2021-07-10T02:40:40,951 copying rnacounter/draft_nocython.py -> build/lib.linux-armv7l-3.9/rnacounter 2021-07-10T02:40:40,954 copying rnacounter/main.py -> build/lib.linux-armv7l-3.9/rnacounter 2021-07-10T02:40:40,956 copying rnacounter/setup.py -> build/lib.linux-armv7l-3.9/rnacounter 2021-07-10T02:40:40,958 creating build/lib.linux-armv7l-3.9/testfiles 2021-07-10T02:40:40,959 copying testfiles/__init__.py -> build/lib.linux-armv7l-3.9/testfiles 2021-07-10T02:40:40,960 running egg_info 2021-07-10T02:40:40,973 writing rnacounter.egg-info/PKG-INFO 2021-07-10T02:40:40,975 writing dependency_links to rnacounter.egg-info/dependency_links.txt 2021-07-10T02:40:40,977 writing requirements to rnacounter.egg-info/requires.txt 2021-07-10T02:40:40,978 writing top-level names to rnacounter.egg-info/top_level.txt 2021-07-10T02:40:40,984 reading manifest file 'rnacounter.egg-info/SOURCES.txt' 2021-07-10T02:40:40,986 reading manifest template 'MANIFEST.in' 2021-07-10T02:40:40,994 writing manifest file 'rnacounter.egg-info/SOURCES.txt' 2021-07-10T02:40:40,996 copying rnacounter/rnacounter.c -> build/lib.linux-armv7l-3.9/rnacounter 2021-07-10T02:40:41,035 copying testfiles/gapdhKO.bam -> build/lib.linux-armv7l-3.9/testfiles 2021-07-10T02:40:41,040 copying testfiles/gapdhKO.bam.bai -> build/lib.linux-armv7l-3.9/testfiles 2021-07-10T02:40:41,044 copying testfiles/mm9_3genes_renamed.gtf -> build/lib.linux-armv7l-3.9/testfiles 2021-07-10T02:40:41,049 running build_ext 2021-07-10T02:40:41,054 building 'rnacounter/rnacounter' extension 2021-07-10T02:40:41,054 creating build/temp.linux-armv7l-3.9 2021-07-10T02:40:41,055 creating build/temp.linux-armv7l-3.9/rnacounter 2021-07-10T02:40:41,056 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c rnacounter/rnacounter.c -o build/temp.linux-armv7l-3.9/rnacounter/rnacounter.o 2021-07-10T02:40:41,434 In file included from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1969, 2021-07-10T02:40:41,435 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2021-07-10T02:40:41,435 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/arrayobject.h:4, 2021-07-10T02:40:41,435 from rnacounter/rnacounter.c:239: 2021-07-10T02:40:41,435 /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2021-07-10T02:40:41,435 17 | #warning "Using deprecated NumPy API, disable it with " \ 2021-07-10T02:40:41,435 | ^~~~~~~ 2021-07-10T02:40:42,676 rnacounter/rnacounter.c: In function ‘PyInit_rnacounter’: 2021-07-10T02:40:42,692 rnacounter/rnacounter.c:29589:53: error: ‘PyTypeObject’ {aka ‘struct _typeobject’} has no member named ‘tp_print’ 2021-07-10T02:40:42,692 29589 | __pyx_type_10rnacounter_10rnacounter_GenomicObject.tp_print = 0; 2021-07-10T02:40:42,693 | ^ 2021-07-10T02:40:42,709 rnacounter/rnacounter.c:29606:44: error: ‘PyTypeObject’ {aka ‘struct _typeobject’} has no member named ‘tp_print’ 2021-07-10T02:40:42,709 29606 | __pyx_type_10rnacounter_10rnacounter_Exon.tp_print = 0; 2021-07-10T02:40:42,709 | ^ 2021-07-10T02:40:42,725 rnacounter/rnacounter.c:29612:50: error: ‘PyTypeObject’ {aka ‘struct _typeobject’} has no member named ‘tp_print’ 2021-07-10T02:40:42,725 29612 | __pyx_type_10rnacounter_10rnacounter_Transcript.tp_print = 0; 2021-07-10T02:40:42,725 | ^ 2021-07-10T02:40:42,741 rnacounter/rnacounter.c:29617:44: error: ‘PyTypeObject’ {aka ‘struct _typeobject’} has no member named ‘tp_print’ 2021-07-10T02:40:42,741 29617 | __pyx_type_10rnacounter_10rnacounter_Gene.tp_print = 0; 2021-07-10T02:40:42,741 | ^ 2021-07-10T02:40:42,757 rnacounter/rnacounter.c:29621:69: error: ‘PyTypeObject’ {aka ‘struct _typeobject’} has no member named ‘tp_print’ 2021-07-10T02:40:42,757 29621 | __pyx_type_10rnacounter_10rnacounter___pyx_scope_struct__parse_gtf.tp_print = 0; 2021-07-10T02:40:42,757 | ^ 2021-07-10T02:40:42,773 rnacounter/rnacounter.c:29624:68: error: ‘PyTypeObject’ {aka ‘struct _typeobject’} has no member named ‘tp_print’ 2021-07-10T02:40:42,773 29624 | __pyx_type_10rnacounter_10rnacounter___pyx_scope_struct_1_genexpr.tp_print = 0; 2021-07-10T02:40:42,773 | ^ 2021-07-10T02:40:42,789 rnacounter/rnacounter.c:29627:68: error: ‘PyTypeObject’ {aka ‘struct _typeobject’} has no member named ‘tp_print’ 2021-07-10T02:40:42,789 29627 | __pyx_type_10rnacounter_10rnacounter___pyx_scope_struct_2_genexpr.tp_print = 0; 2021-07-10T02:40:42,789 | ^ 2021-07-10T02:40:42,805 rnacounter/rnacounter.c:29630:65: error: ‘PyTypeObject’ {aka ‘struct _typeobject’} has no member named ‘tp_print’ 2021-07-10T02:40:42,805 29630 | __pyx_type_10rnacounter_10rnacounter___pyx_scope_struct_3_join.tp_print = 0; 2021-07-10T02:40:42,806 | ^ 2021-07-10T02:40:42,821 rnacounter/rnacounter.c:29633:68: error: ‘PyTypeObject’ {aka ‘struct _typeobject’} has no member named ‘tp_print’ 2021-07-10T02:40:42,822 29633 | __pyx_type_10rnacounter_10rnacounter___pyx_scope_struct_4_genexpr.tp_print = 0; 2021-07-10T02:40:42,822 | ^ 2021-07-10T02:40:42,838 rnacounter/rnacounter.c:29636:68: error: ‘PyTypeObject’ {aka ‘struct _typeobject’} has no member named ‘tp_print’ 2021-07-10T02:40:42,838 29636 | __pyx_type_10rnacounter_10rnacounter___pyx_scope_struct_5_genexpr.tp_print = 0; 2021-07-10T02:40:42,838 | ^ 2021-07-10T02:40:42,853 rnacounter/rnacounter.c:29639:68: error: ‘PyTypeObject’ {aka ‘struct _typeobject’} has no member named ‘tp_print’ 2021-07-10T02:40:42,854 29639 | __pyx_type_10rnacounter_10rnacounter___pyx_scope_struct_6_genexpr.tp_print = 0; 2021-07-10T02:40:42,854 | ^ 2021-07-10T02:40:42,869 rnacounter/rnacounter.c:29642:74: error: ‘PyTypeObject’ {aka ‘struct _typeobject’} has no member named ‘tp_print’ 2021-07-10T02:40:42,870 29642 | __pyx_type_10rnacounter_10rnacounter___pyx_scope_struct_7_process_chunk.tp_print = 0; 2021-07-10T02:40:42,870 | ^ 2021-07-10T02:40:42,885 rnacounter/rnacounter.c:29645:68: error: ‘PyTypeObject’ {aka ‘struct _typeobject’} has no member named ‘tp_print’ 2021-07-10T02:40:42,886 29645 | __pyx_type_10rnacounter_10rnacounter___pyx_scope_struct_8_genexpr.tp_print = 0; 2021-07-10T02:40:42,886 | ^ 2021-07-10T02:40:42,902 rnacounter/rnacounter.c:29648:68: error: ‘PyTypeObject’ {aka ‘struct _typeobject’} has no member named ‘tp_print’ 2021-07-10T02:40:42,902 29648 | __pyx_type_10rnacounter_10rnacounter___pyx_scope_struct_9_genexpr.tp_print = 0; 2021-07-10T02:40:42,902 | ^ 2021-07-10T02:40:42,918 rnacounter/rnacounter.c:29651:69: error: ‘PyTypeObject’ {aka ‘struct _typeobject’} has no member named ‘tp_print’ 2021-07-10T02:40:42,918 29651 | __pyx_type_10rnacounter_10rnacounter___pyx_scope_struct_10_genexpr.tp_print = 0; 2021-07-10T02:40:42,918 | ^ 2021-07-10T02:40:42,934 rnacounter/rnacounter.c:29654:69: error: ‘PyTypeObject’ {aka ‘struct _typeobject’} has no member named ‘tp_print’ 2021-07-10T02:40:42,934 29654 | __pyx_type_10rnacounter_10rnacounter___pyx_scope_struct_11_genexpr.tp_print = 0; 2021-07-10T02:40:42,934 | ^ 2021-07-10T02:40:42,950 rnacounter/rnacounter.c:29657:74: error: ‘PyTypeObject’ {aka ‘struct _typeobject’} has no member named ‘tp_print’ 2021-07-10T02:40:42,951 29657 | __pyx_type_10rnacounter_10rnacounter___pyx_scope_struct_12_print_output.tp_print = 0; 2021-07-10T02:40:42,951 | ^ 2021-07-10T02:40:42,967 rnacounter/rnacounter.c:29660:72: error: ‘PyTypeObject’ {aka ‘struct _typeobject’} has no member named ‘tp_print’ 2021-07-10T02:40:42,967 29660 | __pyx_type_10rnacounter_10rnacounter___pyx_scope_struct_13_parse_args.tp_print = 0; 2021-07-10T02:40:42,967 | ^ 2021-07-10T02:40:42,983 rnacounter/rnacounter.c:29663:69: error: ‘PyTypeObject’ {aka ‘struct _typeobject’} has no member named ‘tp_print’ 2021-07-10T02:40:42,983 29663 | __pyx_type_10rnacounter_10rnacounter___pyx_scope_struct_14_genexpr.tp_print = 0; 2021-07-10T02:40:42,983 | ^ 2021-07-10T02:40:42,999 rnacounter/rnacounter.c:29666:69: error: ‘PyTypeObject’ {aka ‘struct _typeobject’} has no member named ‘tp_print’ 2021-07-10T02:40:42,999 29666 | __pyx_type_10rnacounter_10rnacounter___pyx_scope_struct_15_genexpr.tp_print = 0; 2021-07-10T02:40:42,999 | ^ 2021-07-10T02:40:43,015 rnacounter/rnacounter.c:29669:69: error: ‘PyTypeObject’ {aka ‘struct _typeobject’} has no member named ‘tp_print’ 2021-07-10T02:40:43,016 29669 | __pyx_type_10rnacounter_10rnacounter___pyx_scope_struct_16_genexpr.tp_print = 0; 2021-07-10T02:40:43,016 | ^ 2021-07-10T02:40:43,137 rnacounter/rnacounter.c: In function ‘__Pyx_ExceptionSave’: 2021-07-10T02:40:43,166 rnacounter/rnacounter.c:30503:21: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_type’; did you mean ‘curexc_type’? 2021-07-10T02:40:43,166 30503 | *type = tstate->exc_type; 2021-07-10T02:40:43,166 | ^~~~~~~~ 2021-07-10T02:40:43,166 | curexc_type 2021-07-10T02:40:43,195 rnacounter/rnacounter.c:30504:22: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_value’; did you mean ‘curexc_value’? 2021-07-10T02:40:43,195 30504 | *value = tstate->exc_value; 2021-07-10T02:40:43,195 | ^~~~~~~~~ 2021-07-10T02:40:43,195 | curexc_value 2021-07-10T02:40:43,224 rnacounter/rnacounter.c:30505:19: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_traceback’; did you mean ‘curexc_traceback’? 2021-07-10T02:40:43,224 30505 | *tb = tstate->exc_traceback; 2021-07-10T02:40:43,225 | ^~~~~~~~~~~~~ 2021-07-10T02:40:43,225 | curexc_traceback 2021-07-10T02:40:43,225 rnacounter/rnacounter.c: In function ‘__Pyx_ExceptionReset’: 2021-07-10T02:40:43,254 rnacounter/rnacounter.c:30517:24: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_type’; did you mean ‘curexc_type’? 2021-07-10T02:40:43,254 30517 | tmp_type = tstate->exc_type; 2021-07-10T02:40:43,254 | ^~~~~~~~ 2021-07-10T02:40:43,254 | curexc_type 2021-07-10T02:40:43,283 rnacounter/rnacounter.c:30518:25: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_value’; did you mean ‘curexc_value’? 2021-07-10T02:40:43,284 30518 | tmp_value = tstate->exc_value; 2021-07-10T02:40:43,284 | ^~~~~~~~~ 2021-07-10T02:40:43,284 | curexc_value 2021-07-10T02:40:43,313 rnacounter/rnacounter.c:30519:22: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_traceback’; did you mean ‘curexc_traceback’? 2021-07-10T02:40:43,313 30519 | tmp_tb = tstate->exc_traceback; 2021-07-10T02:40:43,314 | ^~~~~~~~~~~~~ 2021-07-10T02:40:43,314 | curexc_traceback 2021-07-10T02:40:43,343 rnacounter/rnacounter.c:30520:13: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_type’; did you mean ‘curexc_type’? 2021-07-10T02:40:43,343 30520 | tstate->exc_type = type; 2021-07-10T02:40:43,343 | ^~~~~~~~ 2021-07-10T02:40:43,343 | curexc_type 2021-07-10T02:40:43,373 rnacounter/rnacounter.c:30521:13: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_value’; did you mean ‘curexc_value’? 2021-07-10T02:40:43,373 30521 | tstate->exc_value = value; 2021-07-10T02:40:43,373 | ^~~~~~~~~ 2021-07-10T02:40:43,373 | curexc_value 2021-07-10T02:40:43,402 rnacounter/rnacounter.c:30522:13: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_traceback’; did you mean ‘curexc_traceback’? 2021-07-10T02:40:43,403 30522 | tstate->exc_traceback = tb; 2021-07-10T02:40:43,403 | ^~~~~~~~~~~~~ 2021-07-10T02:40:43,403 | curexc_traceback 2021-07-10T02:40:43,410 rnacounter/rnacounter.c: In function ‘__Pyx_GetException’: 2021-07-10T02:40:43,439 rnacounter/rnacounter.c:30565:24: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_type’; did you mean ‘curexc_type’? 2021-07-10T02:40:43,439 30565 | tmp_type = tstate->exc_type; 2021-07-10T02:40:43,439 | ^~~~~~~~ 2021-07-10T02:40:43,439 | curexc_type 2021-07-10T02:40:43,468 rnacounter/rnacounter.c:30566:25: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_value’; did you mean ‘curexc_value’? 2021-07-10T02:40:43,468 30566 | tmp_value = tstate->exc_value; 2021-07-10T02:40:43,468 | ^~~~~~~~~ 2021-07-10T02:40:43,469 | curexc_value 2021-07-10T02:40:43,497 rnacounter/rnacounter.c:30567:22: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_traceback’; did you mean ‘curexc_traceback’? 2021-07-10T02:40:43,498 30567 | tmp_tb = tstate->exc_traceback; 2021-07-10T02:40:43,498 | ^~~~~~~~~~~~~ 2021-07-10T02:40:43,498 | curexc_traceback 2021-07-10T02:40:43,527 rnacounter/rnacounter.c:30568:13: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_type’; did you mean ‘curexc_type’? 2021-07-10T02:40:43,527 30568 | tstate->exc_type = local_type; 2021-07-10T02:40:43,528 | ^~~~~~~~ 2021-07-10T02:40:43,528 | curexc_type 2021-07-10T02:40:43,557 rnacounter/rnacounter.c:30569:13: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_value’; did you mean ‘curexc_value’? 2021-07-10T02:40:43,557 30569 | tstate->exc_value = local_value; 2021-07-10T02:40:43,557 | ^~~~~~~~~ 2021-07-10T02:40:43,557 | curexc_value 2021-07-10T02:40:43,587 rnacounter/rnacounter.c:30570:13: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_traceback’; did you mean ‘curexc_traceback’? 2021-07-10T02:40:43,587 30570 | tstate->exc_traceback = local_tb; 2021-07-10T02:40:43,587 | ^~~~~~~~~~~~~ 2021-07-10T02:40:43,587 | curexc_traceback 2021-07-10T02:40:43,595 rnacounter/rnacounter.c: In function ‘__Pyx_ParseOptionalKeywords’: 2021-07-10T02:40:43,611 rnacounter/rnacounter.c:30674:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-10T02:40:43,611 30674 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-10T02:40:43,611 | ^ 2021-07-10T02:40:43,612 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-10T02:40:43,612 from /usr/include/python3.9/Python.h:97, 2021-07-10T02:40:43,612 from rnacounter/rnacounter.c:16: 2021-07-10T02:40:43,612 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-10T02:40:43,612 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-10T02:40:43,612 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-10T02:40:43,631 rnacounter/rnacounter.c:30674:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-10T02:40:43,632 30674 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-10T02:40:43,632 | ^ 2021-07-10T02:40:43,632 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-10T02:40:43,632 from /usr/include/python3.9/Python.h:97, 2021-07-10T02:40:43,632 from rnacounter/rnacounter.c:16: 2021-07-10T02:40:43,632 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-10T02:40:43,632 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-10T02:40:43,633 | ^~~~~~~~~~~~~~~~~~~ 2021-07-10T02:40:43,652 rnacounter/rnacounter.c:30674:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-10T02:40:43,652 30674 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-10T02:40:43,652 | ^ 2021-07-10T02:40:43,652 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-10T02:40:43,652 from /usr/include/python3.9/Python.h:97, 2021-07-10T02:40:43,652 from rnacounter/rnacounter.c:16: 2021-07-10T02:40:43,652 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-10T02:40:43,653 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-10T02:40:43,653 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-10T02:40:43,672 rnacounter/rnacounter.c:30674:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-10T02:40:43,672 30674 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-10T02:40:43,672 | ^ 2021-07-10T02:40:43,672 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-10T02:40:43,672 from /usr/include/python3.9/Python.h:97, 2021-07-10T02:40:43,672 from rnacounter/rnacounter.c:16: 2021-07-10T02:40:43,672 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-10T02:40:43,673 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-10T02:40:43,673 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-10T02:40:43,691 rnacounter/rnacounter.c:30674:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-10T02:40:43,692 30674 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-10T02:40:43,692 | ^ 2021-07-10T02:40:43,692 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-10T02:40:43,692 from /usr/include/python3.9/Python.h:97, 2021-07-10T02:40:43,692 from rnacounter/rnacounter.c:16: 2021-07-10T02:40:43,692 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-10T02:40:43,692 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-10T02:40:43,693 | ^~~~~~~~~~~~~~~~~~~ 2021-07-10T02:40:43,711 rnacounter/rnacounter.c:30674:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-10T02:40:43,712 30674 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-10T02:40:43,712 | ^ 2021-07-10T02:40:43,712 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-10T02:40:43,712 from /usr/include/python3.9/Python.h:97, 2021-07-10T02:40:43,712 from rnacounter/rnacounter.c:16: 2021-07-10T02:40:43,712 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-10T02:40:43,712 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-10T02:40:43,713 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-10T02:40:43,735 rnacounter/rnacounter.c:30690:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-10T02:40:43,736 30690 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-10T02:40:43,736 | ^ 2021-07-10T02:40:43,736 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-10T02:40:43,736 from /usr/include/python3.9/Python.h:97, 2021-07-10T02:40:43,736 from rnacounter/rnacounter.c:16: 2021-07-10T02:40:43,736 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-10T02:40:43,736 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-10T02:40:43,736 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-10T02:40:43,755 rnacounter/rnacounter.c:30690:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-10T02:40:43,756 30690 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-10T02:40:43,756 | ^ 2021-07-10T02:40:43,756 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-10T02:40:43,756 from /usr/include/python3.9/Python.h:97, 2021-07-10T02:40:43,756 from rnacounter/rnacounter.c:16: 2021-07-10T02:40:43,756 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-10T02:40:43,756 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-10T02:40:43,756 | ^~~~~~~~~~~~~~~~~~~ 2021-07-10T02:40:43,775 rnacounter/rnacounter.c:30690:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-10T02:40:43,776 30690 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-10T02:40:43,776 | ^ 2021-07-10T02:40:43,776 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-10T02:40:43,776 from /usr/include/python3.9/Python.h:97, 2021-07-10T02:40:43,776 from rnacounter/rnacounter.c:16: 2021-07-10T02:40:43,776 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-10T02:40:43,776 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-10T02:40:43,776 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-10T02:40:43,795 rnacounter/rnacounter.c:30690:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-10T02:40:43,796 30690 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-10T02:40:43,796 | ^ 2021-07-10T02:40:43,796 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-10T02:40:43,796 from /usr/include/python3.9/Python.h:97, 2021-07-10T02:40:43,796 from rnacounter/rnacounter.c:16: 2021-07-10T02:40:43,796 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-10T02:40:43,796 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-10T02:40:43,796 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-10T02:40:43,815 rnacounter/rnacounter.c:30690:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-10T02:40:43,816 30690 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-10T02:40:43,816 | ^ 2021-07-10T02:40:43,816 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-10T02:40:43,816 from /usr/include/python3.9/Python.h:97, 2021-07-10T02:40:43,816 from rnacounter/rnacounter.c:16: 2021-07-10T02:40:43,816 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-10T02:40:43,816 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-10T02:40:43,816 | ^~~~~~~~~~~~~~~~~~~ 2021-07-10T02:40:43,835 rnacounter/rnacounter.c:30690:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-10T02:40:43,836 30690 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-10T02:40:43,836 | ^ 2021-07-10T02:40:43,836 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-10T02:40:43,836 from /usr/include/python3.9/Python.h:97, 2021-07-10T02:40:43,836 from rnacounter/rnacounter.c:16: 2021-07-10T02:40:43,836 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-10T02:40:43,836 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-10T02:40:43,836 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-10T02:40:44,271 rnacounter/rnacounter.c: In function ‘__Pyx_CyFunction_Call’: 2021-07-10T02:40:44,289 rnacounter/rnacounter.c:32464:2: warning: ‘PyCFunction_Call’ is deprecated [-Wdeprecated-declarations] 2021-07-10T02:40:44,289 32464 | return PyCFunction_Call(func, arg, kw); 2021-07-10T02:40:44,289 | ^~~~~~ 2021-07-10T02:40:44,289 In file included from /usr/include/python3.9/Python.h:111, 2021-07-10T02:40:44,290 from rnacounter/rnacounter.c:16: 2021-07-10T02:40:44,290 /usr/include/python3.9/methodobject.h:33:43: note: declared here 2021-07-10T02:40:44,290 33 | Py_DEPRECATED(3.9) PyAPI_FUNC(PyObject *) PyCFunction_Call(PyObject *, PyObject *, PyObject *); 2021-07-10T02:40:44,290 | ^~~~~~~~~~~~~~~~ 2021-07-10T02:40:44,290 rnacounter/rnacounter.c: In function ‘__Pyx_CyFunction_init’: 2021-07-10T02:40:44,307 rnacounter/rnacounter.c:32529:5: warning: ‘PyCFunction_Call’ is deprecated [-Wdeprecated-declarations] 2021-07-10T02:40:44,307 32529 | __pyx_CyFunctionType_type.tp_call = PyCFunction_Call; 2021-07-10T02:40:44,308 | ^~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-10T02:40:44,308 In file included from /usr/include/python3.9/Python.h:111, 2021-07-10T02:40:44,308 from rnacounter/rnacounter.c:16: 2021-07-10T02:40:44,308 /usr/include/python3.9/methodobject.h:33:43: note: declared here 2021-07-10T02:40:44,308 33 | Py_DEPRECATED(3.9) PyAPI_FUNC(PyObject *) PyCFunction_Call(PyObject *, PyObject *, PyObject *); 2021-07-10T02:40:44,308 | ^~~~~~~~~~~~~~~~ 2021-07-10T02:40:44,404 rnacounter/rnacounter.c: In function ‘__Pyx_ExceptionSwap’: 2021-07-10T02:40:44,436 rnacounter/rnacounter.c:33356:24: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_type’; did you mean ‘curexc_type’? 2021-07-10T02:40:44,436 33356 | tmp_type = tstate->exc_type; 2021-07-10T02:40:44,436 | ^~~~~~~~ 2021-07-10T02:40:44,436 | curexc_type 2021-07-10T02:40:44,468 rnacounter/rnacounter.c:33357:25: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_value’; did you mean ‘curexc_value’? 2021-07-10T02:40:44,468 33357 | tmp_value = tstate->exc_value; 2021-07-10T02:40:44,469 | ^~~~~~~~~ 2021-07-10T02:40:44,469 | curexc_value 2021-07-10T02:40:44,500 rnacounter/rnacounter.c:33358:22: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_traceback’; did you mean ‘curexc_traceback’? 2021-07-10T02:40:44,501 33358 | tmp_tb = tstate->exc_traceback; 2021-07-10T02:40:44,501 | ^~~~~~~~~~~~~ 2021-07-10T02:40:44,501 | curexc_traceback 2021-07-10T02:40:44,533 rnacounter/rnacounter.c:33359:13: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_type’; did you mean ‘curexc_type’? 2021-07-10T02:40:44,533 33359 | tstate->exc_type = *type; 2021-07-10T02:40:44,533 | ^~~~~~~~ 2021-07-10T02:40:44,533 | curexc_type 2021-07-10T02:40:44,565 rnacounter/rnacounter.c:33360:13: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_value’; did you mean ‘curexc_value’? 2021-07-10T02:40:44,565 33360 | tstate->exc_value = *value; 2021-07-10T02:40:44,565 | ^~~~~~~~~ 2021-07-10T02:40:44,566 | curexc_value 2021-07-10T02:40:44,597 rnacounter/rnacounter.c:33361:13: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_traceback’; did you mean ‘curexc_traceback’? 2021-07-10T02:40:44,598 33361 | tstate->exc_traceback = *tb; 2021-07-10T02:40:44,598 | ^~~~~~~~~~~~~ 2021-07-10T02:40:44,598 | curexc_traceback 2021-07-10T02:40:45,071 In file included from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarrayobject.h:21, 2021-07-10T02:40:45,071 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/arrayobject.h:4, 2021-07-10T02:40:45,071 from rnacounter/rnacounter.c:239: 2021-07-10T02:40:45,071 At top level: 2021-07-10T02:40:45,072 /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/__multiarray_api.h:1464:1: warning: ‘_import_array’ defined but not used [-Wunused-function] 2021-07-10T02:40:45,072 1464 | _import_array(void) 2021-07-10T02:40:45,073 | ^~~~~~~~~~~~~ 2021-07-10T02:40:45,081 error: command '/usr/bin/arm-linux-gnueabihf-gcc' failed with exit code 1 2021-07-10T02:40:45,195 Building wheel for rnacounter (setup.py): finished with status 'error' 2021-07-10T02:40:45,195 ERROR: Failed building wheel for rnacounter 2021-07-10T02:40:45,196 Running setup.py clean for rnacounter 2021-07-10T02:40:45,196 Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-_sfyu3ly/rnacounter_02b336046beb4e22bf3b5ab081dfde03/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-_sfyu3ly/rnacounter_02b336046beb4e22bf3b5ab081dfde03/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' clean --all 2021-07-10T02:40:46,226 running clean 2021-07-10T02:40:46,228 removing 'build/temp.linux-armv7l-3.9' (and everything under it) 2021-07-10T02:40:46,229 removing 'build/lib.linux-armv7l-3.9' (and everything under it) 2021-07-10T02:40:46,235 'build/bdist.linux-armv7l' does not exist -- can't clean it 2021-07-10T02:40:46,235 'build/scripts-3.9' does not exist -- can't clean it 2021-07-10T02:40:46,236 removing 'build' 2021-07-10T02:40:46,319 Failed to build rnacounter 2021-07-10T02:40:46,319 ERROR: Failed to build one or more wheels 2021-07-10T02:40:46,320 Exception information: 2021-07-10T02:40:46,320 Traceback (most recent call last): 2021-07-10T02:40:46,320 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/cli/base_command.py", line 180, in _main 2021-07-10T02:40:46,320 status = self.run(options, args) 2021-07-10T02:40:46,320 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/cli/req_command.py", line 205, in wrapper 2021-07-10T02:40:46,320 return func(self, options, args) 2021-07-10T02:40:46,320 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/commands/wheel.py", line 174, in run 2021-07-10T02:40:46,320 raise CommandError( 2021-07-10T02:40:46,320 pip._internal.exceptions.CommandError: Failed to build one or more wheels 2021-07-10T02:40:46,323 Removed build tracker: '/tmp/pip-req-tracker-reeqeh96'