2021-07-10T06:01:45,359 Created temporary directory: /tmp/pip-ephem-wheel-cache-p83_8551 2021-07-10T06:01:45,362 Created temporary directory: /tmp/pip-req-tracker-g8r11id5 2021-07-10T06:01:45,362 Initialized build tracking at /tmp/pip-req-tracker-g8r11id5 2021-07-10T06:01:45,362 Created build tracker: /tmp/pip-req-tracker-g8r11id5 2021-07-10T06:01:45,363 Entered build tracker: /tmp/pip-req-tracker-g8r11id5 2021-07-10T06:01:45,363 Created temporary directory: /tmp/pip-wheel-8vbxr5_n 2021-07-10T06:01:45,396 1 location(s) to search for versions of klustakwik2: 2021-07-10T06:01:45,396 * https://pypi.org/simple/klustakwik2/ 2021-07-10T06:01:45,396 Fetching project page and analyzing links: https://pypi.org/simple/klustakwik2/ 2021-07-10T06:01:45,397 Getting page https://pypi.org/simple/klustakwik2/ 2021-07-10T06:01:45,398 Found index url https://pypi.org/simple 2021-07-10T06:01:45,500 Found link https://files.pythonhosted.org/packages/1a/d6/c9974e8c616255af108f0d944a8f5ecf6d3546511e8804c3381c5577704a/klustakwik2-0.1.0b0.tar.bz2#sha256=36190f640cae42d9a4565b054ee7803b1fd7cd0d5f7e118e636c627ccd83c23d (from https://pypi.org/simple/klustakwik2/), version: 0.1.0b0 2021-07-10T06:01:45,500 Found link https://files.pythonhosted.org/packages/92/d6/a70199d4ba94ac3d18113cc615f9f95889a606638af61d501c3dc67e27ef/klustakwik2-0.1.0b0.tar.gz#sha256=e0b7638fc7dc24f7958cae9150d1587d3605aa26d38686d290ab483234d3740b (from https://pypi.org/simple/klustakwik2/), version: 0.1.0b0 2021-07-10T06:01:45,500 Found link https://files.pythonhosted.org/packages/67/ff/a61218f8963216650da5ee80c7ce41a1359e4ddfa67a99d1465cda1ed566/klustakwik2-0.1.0b0.zip#sha256=e0d0a0d49aadbcba24a5b7a1611d6c3e59649e7179838409cccfe93347b497c5 (from https://pypi.org/simple/klustakwik2/), version: 0.1.0b0 2021-07-10T06:01:45,501 Found link https://files.pythonhosted.org/packages/f7/e1/8d1f7c3e1c35cfa44178d4640d975527846bfcf41033d9c8fd4c736858b8/klustakwik2-0.1.0.tar.bz2#sha256=dd45c7a3d3540983c1f9ec2d9d733219df627be09e8878b10539db5e5c902e5c (from https://pypi.org/simple/klustakwik2/), version: 0.1.0 2021-07-10T06:01:45,501 Found link https://files.pythonhosted.org/packages/42/60/5650e90b5f10abcb632def27109eec5a07e0f7d9f4f6668b044228f4425e/klustakwik2-0.1.0.tar.gz#sha256=eb008772e88e920a775730d850234bc73877ce034d5b774bc7d79a69bee321bf (from https://pypi.org/simple/klustakwik2/), version: 0.1.0 2021-07-10T06:01:45,501 Found link https://files.pythonhosted.org/packages/10/40/65bb0d375a6bd5a3d16dd4de829748e0964b66e9e0ec41983c4eb3e7688c/klustakwik2-0.1.0.zip#sha256=ae033329ffa70206ec1922c9b4229c63efeec42410f02c537cf13888dee7ca8c (from https://pypi.org/simple/klustakwik2/), version: 0.1.0 2021-07-10T06:01:45,502 Found link https://files.pythonhosted.org/packages/1d/a3/0ae7f737ee55436826eb946e9112d926d8eb585c043c4c46018e426d2c96/klustakwik2-0.2.0.dev0.tar.bz2#sha256=a24f2eb7947d877cded15d6dfcb453452b61d4c944bee0f7c1904f399ba6be83 (from https://pypi.org/simple/klustakwik2/), version: 0.2.0.dev0 2021-07-10T06:01:45,502 Found link https://files.pythonhosted.org/packages/e8/22/58fa76b2af0b1ec5d002c825a054488a43e6bbfe57cb9770b179f92fb2c8/klustakwik2-0.2.0.dev0.tar.gz#sha256=67ad3a76da4eda184bfe5e5d90585e2bb05793515cdfa3e26d48bbd8fd1062ac (from https://pypi.org/simple/klustakwik2/), version: 0.2.0.dev0 2021-07-10T06:01:45,502 Found link https://files.pythonhosted.org/packages/17/5f/62f475d3df5478a036610fe2b731d5ae3e8e909429e0b9d2a9afa6cec3dd/klustakwik2-0.2.0.dev0.zip#sha256=844e20e921e6b9ce1b423a197488d404f294a8688113d015753c4c5a39772880 (from https://pypi.org/simple/klustakwik2/), version: 0.2.0.dev0 2021-07-10T06:01:45,503 Found link https://files.pythonhosted.org/packages/63/08/e757b5696add47bf7ab4862dbf4601049a364ef294fc32656ddc429e9595/klustakwik2-0.2.0.tar.bz2#sha256=783b87fc4d89816ea9d586171b2d9bc3026bee49a8f7cda407528747e383f746 (from https://pypi.org/simple/klustakwik2/), version: 0.2.0 2021-07-10T06:01:45,503 Found link https://files.pythonhosted.org/packages/28/eb/815bb83c5b164317f81dc5ab55c960517b84dfb601fc751cf30387080952/klustakwik2-0.2.0.tar.gz#sha256=3172b4a0756b5176d336af6e30a4c04a5dd27e39d8ecd0252e0008b0608847e0 (from https://pypi.org/simple/klustakwik2/), version: 0.2.0 2021-07-10T06:01:45,503 Found link https://files.pythonhosted.org/packages/7f/79/b506eaf810914722b74979b52d23b27ffd933c1e8ea7a5920240ffaa59eb/klustakwik2-0.2.0.zip#sha256=6e7b4227807baca9035ea87db5ef740a7247cc94cbcd0edf72fb4775db48fb79 (from https://pypi.org/simple/klustakwik2/), version: 0.2.0 2021-07-10T06:01:45,503 Found link https://files.pythonhosted.org/packages/3a/65/7f1597859f12bab5743ce39fc3bccffa895b499d56b76c80f67d686f9def/klustakwik2-0.2.1.tar.bz2#sha256=ffe4454baf70ae69476fbd3a70724605c74e29341c4559932f4e6f6ab2132a24 (from https://pypi.org/simple/klustakwik2/), version: 0.2.1 2021-07-10T06:01:45,504 Found link https://files.pythonhosted.org/packages/4e/4a/8ad93eda1789275fc2bd9793a2db6128e1aae7bdc8f1394271000e231ff4/klustakwik2-0.2.1.tar.gz#sha256=d3eb905aeca1127756d5babca411606acda70caddd65f0fdec75f5f85bdb05a0 (from https://pypi.org/simple/klustakwik2/), version: 0.2.1 2021-07-10T06:01:45,504 Found link https://files.pythonhosted.org/packages/bb/49/d2ce65bd43a1200ea59d0c9ec7dc4685961bf0c31bba895096e34d54267f/klustakwik2-0.2.1.zip#sha256=c7a3c4d078b1a7928d1449ab45b4848260bb7b020ec6d360662ef2fb04b74714 (from https://pypi.org/simple/klustakwik2/), version: 0.2.1 2021-07-10T06:01:45,504 Found link https://files.pythonhosted.org/packages/ec/a6/1fdd5fdae30662f38be1e2c1d3294694e3e31c573c5a9c142c6e3e09c5c6/klustakwik2-0.2.2.tar.bz2#sha256=54470d2f0c8b6c403d1011f0c36109125137ddb1d73a35aff8180a5cc816ceb9 (from https://pypi.org/simple/klustakwik2/), version: 0.2.2 2021-07-10T06:01:45,505 Found link https://files.pythonhosted.org/packages/68/45/6ec4583f79a6b4828390a85824c50473ebd9ffcaebb0c024e953ffb39ea2/klustakwik2-0.2.2.tar.gz#sha256=f825c55cdf2d3dab96ee1c0255ff78629c6f8a3dffd192a458a7fe93eda23957 (from https://pypi.org/simple/klustakwik2/), version: 0.2.2 2021-07-10T06:01:45,505 Found link https://files.pythonhosted.org/packages/e7/8c/a9f0f04b632db38004da1c9f20602388610e48fe142cbf9eb1e91626dd0f/klustakwik2-0.2.2.zip#sha256=f3489f7b0f7277b6017daf49cf500e700716b07ebd242f4f48b743faa43b377e (from https://pypi.org/simple/klustakwik2/), version: 0.2.2 2021-07-10T06:01:45,505 Found link https://files.pythonhosted.org/packages/da/c7/92e6d81a3b37f73384257723e81005ceb9ef51522167cf68efd04f0b9919/klustakwik2-0.2.3.tar.bz2#sha256=d1506e7607d0ed7a64fe829acd3328ddc640f402702f20f7ce3e29e37c407b26 (from https://pypi.org/simple/klustakwik2/), version: 0.2.3 2021-07-10T06:01:45,505 Found link https://files.pythonhosted.org/packages/44/02/5266a171217e49af76dfb8b98786f23fc3ffb0aa1019958c961969ae2043/klustakwik2-0.2.3.tar.gz#sha256=04d7166c3f364c2441c0312a892f152c436039f59f3a7fcefbc4cca10a160583 (from https://pypi.org/simple/klustakwik2/), version: 0.2.3 2021-07-10T06:01:45,506 Found link https://files.pythonhosted.org/packages/88/2c/b25b5efa3cc8167a28343d1cb80751761664b3c3b4cf8b398a3f616fb008/klustakwik2-0.2.3.zip#sha256=f53fb91310b0d47aaf0d1bc24690dd5dbe17c8e1c13f23cbb558d3fab127208d (from https://pypi.org/simple/klustakwik2/), version: 0.2.3 2021-07-10T06:01:45,506 Found link https://files.pythonhosted.org/packages/10/02/c786b26d177453450bd98f3608d5a7b7a08f6f3ff471114653829329b6e3/klustakwik2-0.2.4.tar.bz2#sha256=84acee4bb81418d9418791b282053e63aa2d2303e6bf1f54d53ca5a428da16b9 (from https://pypi.org/simple/klustakwik2/), version: 0.2.4 2021-07-10T06:01:45,506 Found link https://files.pythonhosted.org/packages/27/9b/39f9f939eef7492b936a1650056cb9bf3b925df4865ee51a3c615283c179/klustakwik2-0.2.4.tar.gz#sha256=fafcd4c8ec68fa4869c725c6f5ff14b3e3dde0686a875db53c699eb7d92d791a (from https://pypi.org/simple/klustakwik2/), version: 0.2.4 2021-07-10T06:01:45,507 Found link https://files.pythonhosted.org/packages/17/5e/e0cc4f3d7b0ef58e849e094f1ba6f93f1b8b9e4c2bdf6d6f3139046591aa/klustakwik2-0.2.4.zip#sha256=ba4c7412bceee00c946476f448cd6d46afcd55e2732f4797b84ab0697b253fe0 (from https://pypi.org/simple/klustakwik2/), version: 0.2.4 2021-07-10T06:01:45,524 Skipping link: none of the wheel's tags (cp35-cp35m-win_amd64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/9f/99/9374d711717c7ea4b4dbe7d069b3bf0c39ffd99dda9f728e756a22721ff7/klustakwik2-0.2.5-cp35-cp35m-win_amd64.whl#sha256=7bf7b1bce6350558803b8559495877cbd48833ef2e0098f11e134127ea347d1f (from https://pypi.org/simple/klustakwik2/) 2021-07-10T06:01:45,524 Found link https://files.pythonhosted.org/packages/5c/6d/b2d4c080aebafb6db4593fb468d71631bc4ca1e6a080f5c86d4b5a0aadfc/klustakwik2-0.2.5.tar.gz#sha256=60ea38620b2c7bd37df480f034f5b96837a907da709cf029db463f477e511a3f (from https://pypi.org/simple/klustakwik2/), version: 0.2.5 2021-07-10T06:01:45,525 Skipping link: none of the wheel's tags (cp27-cp27m-win_amd64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/cd/12/eb680c3ee6e3effba51a8539e90d1091edc260ecfbb71e5d5dd63537695f/klustakwik2-0.2.6-cp27-cp27m-win_amd64.whl#sha256=60c03fce4bb36425b3f69360d5b441048712d22d343ed98ea8cf609ec847ebb1 (from https://pypi.org/simple/klustakwik2/) 2021-07-10T06:01:45,525 Skipping link: none of the wheel's tags (cp35-cp35m-win_amd64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/ac/29/3964e52e5476c5912c52dd1c51979df0aad107efe2bbb8b9fe0bd362bdd2/klustakwik2-0.2.6-cp35-cp35m-win_amd64.whl#sha256=7e11788c1fe50078cfe563b26df630b5a1d09507fcdbedcc3d463958a09c7660 (from https://pypi.org/simple/klustakwik2/) 2021-07-10T06:01:45,525 Found link https://files.pythonhosted.org/packages/fc/65/d105474b087a7e4624e7200a753ec7b37b26d2f866e31b523ff24b366ec7/klustakwik2-0.2.6.zip#sha256=fa97e786dae2877da5a9ead6b5d3b6d63f93f67dc2113b7c13f7592df85eb062 (from https://pypi.org/simple/klustakwik2/), version: 0.2.6 2021-07-10T06:01:45,526 Skipping link: none of the wheel's tags (cp27-cp27m-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/1e/d2/85b391ecb17cfc75b2766aa3035b6b91cdd8ed3118676fa5f8cc46d8597d/klustakwik2-0.2.7-cp27-cp27m-manylinux1_x86_64.whl#sha256=2d9510048cc7b9cb5725ca8a2c44fdf5ad0db41fc96179a68314fe2b538caa24 (from https://pypi.org/simple/klustakwik2/) 2021-07-10T06:01:45,526 Skipping link: none of the wheel's tags (cp36-cp36m-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/6c/4d/840da8eb78038dec6c1b3ffdf02dfd30f02ad8c32ad64aae732c81df2f39/klustakwik2-0.2.7-cp36-cp36m-manylinux1_x86_64.whl#sha256=2c9821086513f4563446a0519181538aef08711a0a702a393ccacb7004244bcd (from https://pypi.org/simple/klustakwik2/) 2021-07-10T06:01:45,527 Skipping link: none of the wheel's tags (cp37-cp37m-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/ee/32/5c5d17c23af19bc85a7ad5a74d1a604d47de6761af88bcc2069eafb9b9c1/klustakwik2-0.2.7-cp37-cp37m-manylinux1_x86_64.whl#sha256=09c45022f11d5c6aaa1b05d43f6d32bfda1cf079fc38f0d18810d814914953f7 (from https://pypi.org/simple/klustakwik2/) 2021-07-10T06:01:45,527 Skipping link: not a file: https://pypi.org/simple/klustakwik2/ 2021-07-10T06:01:45,531 Given no hashes to check 3 links for project 'klustakwik2': discarding no candidates 2021-07-10T06:01:45,550 Collecting klustakwik2==0.2.2 2021-07-10T06:01:45,552 Created temporary directory: /tmp/pip-unpack-2a8tpctt 2021-07-10T06:01:46,013 Downloading klustakwik2-0.2.2.zip (723 kB) 2021-07-10T06:01:46,362 Added klustakwik2==0.2.2 from https://files.pythonhosted.org/packages/e7/8c/a9f0f04b632db38004da1c9f20602388610e48fe142cbf9eb1e91626dd0f/klustakwik2-0.2.2.zip#sha256=f3489f7b0f7277b6017daf49cf500e700716b07ebd242f4f48b743faa43b377e to build tracker '/tmp/pip-req-tracker-g8r11id5' 2021-07-10T06:01:46,363 Running setup.py (path:/tmp/pip-wheel-8vbxr5_n/klustakwik2_94e891f30c854a4dbad6673802ae74ce/setup.py) egg_info for package klustakwik2 2021-07-10T06:01:46,363 Created temporary directory: /tmp/pip-pip-egg-info-b6fxij0m 2021-07-10T06:01:46,364 Running command python setup.py egg_info 2021-07-10T06:01:48,262 /usr/local/lib/python3.9/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-8vbxr5_n/klustakwik2_94e891f30c854a4dbad6673802ae74ce/klustakwik2/numerics/cylib/compute_cluster_masks_cy.pyx 2021-07-10T06:01:48,263 tree = Parsing.p_module(s, pxd, full_module_name) 2021-07-10T06:01:55,263 /usr/local/lib/python3.9/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-8vbxr5_n/klustakwik2_94e891f30c854a4dbad6673802ae74ce/klustakwik2/numerics/cylib/compute_cluster_penalties_cy.pyx 2021-07-10T06:01:55,264 tree = Parsing.p_module(s, pxd, full_module_name) 2021-07-10T06:02:02,523 /usr/local/lib/python3.9/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-8vbxr5_n/klustakwik2_94e891f30c854a4dbad6673802ae74ce/klustakwik2/numerics/cylib/e_step_cy.pyx 2021-07-10T06:02:02,523 tree = Parsing.p_module(s, pxd, full_module_name) 2021-07-10T06:02:12,257 /usr/local/lib/python3.9/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-8vbxr5_n/klustakwik2_94e891f30c854a4dbad6673802ae74ce/klustakwik2/numerics/cylib/m_step_cy.pyx 2021-07-10T06:02:12,257 tree = Parsing.p_module(s, pxd, full_module_name) 2021-07-10T06:02:22,823 /usr/local/lib/python3.9/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-8vbxr5_n/klustakwik2_94e891f30c854a4dbad6673802ae74ce/klustakwik2/numerics/cylib/masks_cy.pyx 2021-07-10T06:02:22,823 tree = Parsing.p_module(s, pxd, full_module_name) 2021-07-10T06:02:30,233 Compiling klustakwik2/numerics/cylib/compute_cluster_masks_cy.pyx because it changed. 2021-07-10T06:02:30,233 Compiling klustakwik2/numerics/cylib/compute_cluster_penalties_cy.pyx because it changed. 2021-07-10T06:02:30,234 Compiling klustakwik2/numerics/cylib/e_step_cy.pyx because it changed. 2021-07-10T06:02:30,234 Compiling klustakwik2/numerics/cylib/m_step_cy.pyx because it changed. 2021-07-10T06:02:30,234 Compiling klustakwik2/numerics/cylib/masks_cy.pyx because it changed. 2021-07-10T06:02:30,234 [1/5] Cythonizing klustakwik2/numerics/cylib/compute_cluster_masks_cy.pyx 2021-07-10T06:02:30,234 [2/5] Cythonizing klustakwik2/numerics/cylib/compute_cluster_penalties_cy.pyx 2021-07-10T06:02:30,235 [3/5] Cythonizing klustakwik2/numerics/cylib/e_step_cy.pyx 2021-07-10T06:02:30,235 [4/5] Cythonizing klustakwik2/numerics/cylib/m_step_cy.pyx 2021-07-10T06:02:30,235 [5/5] Cythonizing klustakwik2/numerics/cylib/masks_cy.pyx 2021-07-10T06:02:30,398 running egg_info 2021-07-10T06:02:30,401 creating /tmp/pip-pip-egg-info-b6fxij0m/klustakwik2.egg-info 2021-07-10T06:02:30,402 writing /tmp/pip-pip-egg-info-b6fxij0m/klustakwik2.egg-info/PKG-INFO 2021-07-10T06:02:30,405 writing dependency_links to /tmp/pip-pip-egg-info-b6fxij0m/klustakwik2.egg-info/dependency_links.txt 2021-07-10T06:02:30,407 writing entry points to /tmp/pip-pip-egg-info-b6fxij0m/klustakwik2.egg-info/entry_points.txt 2021-07-10T06:02:30,408 writing top-level names to /tmp/pip-pip-egg-info-b6fxij0m/klustakwik2.egg-info/top_level.txt 2021-07-10T06:02:30,410 writing manifest file '/tmp/pip-pip-egg-info-b6fxij0m/klustakwik2.egg-info/SOURCES.txt' 2021-07-10T06:02:30,599 reading manifest file '/tmp/pip-pip-egg-info-b6fxij0m/klustakwik2.egg-info/SOURCES.txt' 2021-07-10T06:02:30,602 reading manifest template 'MANIFEST.in' 2021-07-10T06:02:30,622 warning: no files found matching '*.pyxbld' under directory 'klustakwik2/numerics/cylib' 2021-07-10T06:02:30,624 warning: no previously-included files matching '__pycache__' found under directory '*' 2021-07-10T06:02:30,625 warning: no previously-included files matching '*.py[co]' found under directory '*' 2021-07-10T06:02:30,625 adding license file 'LICENSE' 2021-07-10T06:02:30,629 writing manifest file '/tmp/pip-pip-egg-info-b6fxij0m/klustakwik2.egg-info/SOURCES.txt' 2021-07-10T06:02:31,095 Source in /tmp/pip-wheel-8vbxr5_n/klustakwik2_94e891f30c854a4dbad6673802ae74ce has version 0.2.2, which satisfies requirement klustakwik2==0.2.2 from https://files.pythonhosted.org/packages/e7/8c/a9f0f04b632db38004da1c9f20602388610e48fe142cbf9eb1e91626dd0f/klustakwik2-0.2.2.zip#sha256=f3489f7b0f7277b6017daf49cf500e700716b07ebd242f4f48b743faa43b377e 2021-07-10T06:02:31,096 Removed klustakwik2==0.2.2 from https://files.pythonhosted.org/packages/e7/8c/a9f0f04b632db38004da1c9f20602388610e48fe142cbf9eb1e91626dd0f/klustakwik2-0.2.2.zip#sha256=f3489f7b0f7277b6017daf49cf500e700716b07ebd242f4f48b743faa43b377e from build tracker '/tmp/pip-req-tracker-g8r11id5' 2021-07-10T06:02:31,100 Created temporary directory: /tmp/pip-unpack-44rj5eaz 2021-07-10T06:02:31,101 Building wheels for collected packages: klustakwik2 2021-07-10T06:02:31,105 Created temporary directory: /tmp/pip-wheel-ruekhza9 2021-07-10T06:02:31,106 Building wheel for klustakwik2 (setup.py): started 2021-07-10T06:02:31,106 Destination directory: /tmp/pip-wheel-ruekhza9 2021-07-10T06:02:31,106 Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-8vbxr5_n/klustakwik2_94e891f30c854a4dbad6673802ae74ce/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-8vbxr5_n/klustakwik2_94e891f30c854a4dbad6673802ae74ce/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-ruekhza9 2021-07-10T06:02:32,953 running bdist_wheel 2021-07-10T06:02:32,958 running build 2021-07-10T06:02:32,958 running build_py 2021-07-10T06:02:33,094 creating build 2021-07-10T06:02:33,094 creating build/lib.linux-armv7l-3.9 2021-07-10T06:02:33,095 creating build/lib.linux-armv7l-3.9/klustakwik2 2021-07-10T06:02:33,096 copying klustakwik2/monitoring.py -> build/lib.linux-armv7l-3.9/klustakwik2 2021-07-10T06:02:33,099 copying klustakwik2/logger.py -> build/lib.linux-armv7l-3.9/klustakwik2 2021-07-10T06:02:33,101 copying klustakwik2/data.py -> build/lib.linux-armv7l-3.9/klustakwik2 2021-07-10T06:02:33,103 copying klustakwik2/default_parameters.py -> build/lib.linux-armv7l-3.9/klustakwik2 2021-07-10T06:02:33,105 copying klustakwik2/precomputations.py -> build/lib.linux-armv7l-3.9/klustakwik2 2021-07-10T06:02:33,107 copying klustakwik2/debugtools.py -> build/lib.linux-armv7l-3.9/klustakwik2 2021-07-10T06:02:33,108 copying klustakwik2/mask_starts.py -> build/lib.linux-armv7l-3.9/klustakwik2 2021-07-10T06:02:33,110 copying klustakwik2/input_output.py -> build/lib.linux-armv7l-3.9/klustakwik2 2021-07-10T06:02:33,112 copying klustakwik2/linear_algebra.py -> build/lib.linux-armv7l-3.9/klustakwik2 2021-07-10T06:02:33,114 copying klustakwik2/__init__.py -> build/lib.linux-armv7l-3.9/klustakwik2 2021-07-10T06:02:33,116 copying klustakwik2/clustering.py -> build/lib.linux-armv7l-3.9/klustakwik2 2021-07-10T06:02:33,120 creating build/lib.linux-armv7l-3.9/klustakwik2/numerics 2021-07-10T06:02:33,121 copying klustakwik2/numerics/__init__.py -> build/lib.linux-armv7l-3.9/klustakwik2/numerics 2021-07-10T06:02:33,125 creating build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib 2021-07-10T06:02:33,126 copying klustakwik2/numerics/cylib/e_step.py -> build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib 2021-07-10T06:02:33,128 copying klustakwik2/numerics/cylib/compute_cluster_masks.py -> build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib 2021-07-10T06:02:33,130 copying klustakwik2/numerics/cylib/masks.py -> build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib 2021-07-10T06:02:33,132 copying klustakwik2/numerics/cylib/compute_cluster_penalties.py -> build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib 2021-07-10T06:02:33,134 copying klustakwik2/numerics/cylib/m_step.py -> build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib 2021-07-10T06:02:33,137 copying klustakwik2/numerics/cylib/__init__.py -> build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib 2021-07-10T06:02:33,139 creating build/lib.linux-armv7l-3.9/klustakwik2/numerics/numbalib 2021-07-10T06:02:33,140 copying klustakwik2/numerics/numbalib/m_step.py -> build/lib.linux-armv7l-3.9/klustakwik2/numerics/numbalib 2021-07-10T06:02:33,143 copying klustakwik2/numerics/numbalib/__init__.py -> build/lib.linux-armv7l-3.9/klustakwik2/numerics/numbalib 2021-07-10T06:02:33,145 creating build/lib.linux-armv7l-3.9/klustakwik2/scripts 2021-07-10T06:02:33,146 copying klustakwik2/scripts/kk2_legacy.py -> build/lib.linux-armv7l-3.9/klustakwik2/scripts 2021-07-10T06:02:33,149 copying klustakwik2/scripts/tools.py -> build/lib.linux-armv7l-3.9/klustakwik2/scripts 2021-07-10T06:02:33,151 copying klustakwik2/scripts/__init__.py -> build/lib.linux-armv7l-3.9/klustakwik2/scripts 2021-07-10T06:02:33,153 creating build/lib.linux-armv7l-3.9/klustakwik2/tests 2021-07-10T06:02:33,154 copying klustakwik2/tests/test_compute_cluster_masks.py -> build/lib.linux-armv7l-3.9/klustakwik2/tests 2021-07-10T06:02:33,157 copying klustakwik2/tests/test_io.py -> build/lib.linux-armv7l-3.9/klustakwik2/tests 2021-07-10T06:02:33,159 copying klustakwik2/tests/test_compute_covariance_matrix.py -> build/lib.linux-armv7l-3.9/klustakwik2/tests 2021-07-10T06:02:33,161 copying klustakwik2/tests/test_partitioning.py -> build/lib.linux-armv7l-3.9/klustakwik2/tests 2021-07-10T06:02:33,163 copying klustakwik2/tests/test_synthetic_data.py -> build/lib.linux-armv7l-3.9/klustakwik2/tests 2021-07-10T06:02:33,166 copying klustakwik2/tests/test_mask_starts.py -> build/lib.linux-armv7l-3.9/klustakwik2/tests 2021-07-10T06:02:33,168 copying klustakwik2/tests/test_linear_algebra.py -> build/lib.linux-armv7l-3.9/klustakwik2/tests 2021-07-10T06:02:33,170 copying klustakwik2/tests/__init__.py -> build/lib.linux-armv7l-3.9/klustakwik2/tests 2021-07-10T06:02:33,172 running egg_info 2021-07-10T06:02:33,186 writing klustakwik2.egg-info/PKG-INFO 2021-07-10T06:02:33,189 writing dependency_links to klustakwik2.egg-info/dependency_links.txt 2021-07-10T06:02:33,191 writing entry points to klustakwik2.egg-info/entry_points.txt 2021-07-10T06:02:33,192 writing top-level names to klustakwik2.egg-info/top_level.txt 2021-07-10T06:02:33,237 reading manifest file 'klustakwik2.egg-info/SOURCES.txt' 2021-07-10T06:02:33,241 reading manifest template 'MANIFEST.in' 2021-07-10T06:02:33,258 warning: no files found matching '*.pyxbld' under directory 'klustakwik2/numerics/cylib' 2021-07-10T06:02:33,259 warning: no previously-included files matching '__pycache__' found under directory '*' 2021-07-10T06:02:33,260 warning: no previously-included files matching '*.py[co]' found under directory '*' 2021-07-10T06:02:33,260 adding license file 'LICENSE' 2021-07-10T06:02:33,266 writing manifest file 'klustakwik2.egg-info/SOURCES.txt' 2021-07-10T06:02:33,270 copying klustakwik2/numerics/cylib/compute_cluster_masks_cy.c -> build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib 2021-07-10T06:02:33,297 copying klustakwik2/numerics/cylib/compute_cluster_masks_cy.pyx -> build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib 2021-07-10T06:02:33,299 copying klustakwik2/numerics/cylib/compute_cluster_penalties_cy.c -> build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib 2021-07-10T06:02:33,327 copying klustakwik2/numerics/cylib/compute_cluster_penalties_cy.pyx -> build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib 2021-07-10T06:02:33,329 copying klustakwik2/numerics/cylib/e_step_cy.cpp -> build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib 2021-07-10T06:02:33,367 copying klustakwik2/numerics/cylib/e_step_cy.pyx -> build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib 2021-07-10T06:02:33,369 copying klustakwik2/numerics/cylib/m_step_cy.c -> build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib 2021-07-10T06:02:33,405 copying klustakwik2/numerics/cylib/m_step_cy.pyx -> build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib 2021-07-10T06:02:33,407 copying klustakwik2/numerics/cylib/masks_cy.cpp -> build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib 2021-07-10T06:02:33,435 copying klustakwik2/numerics/cylib/masks_cy.pyx -> build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib 2021-07-10T06:02:33,441 running build_ext 2021-07-10T06:02:33,446 building 'klustakwik2.numerics.cylib.compute_cluster_masks_cy' extension 2021-07-10T06:02:33,446 creating build/temp.linux-armv7l-3.9 2021-07-10T06:02:33,447 creating build/temp.linux-armv7l-3.9/klustakwik2 2021-07-10T06:02:33,447 creating build/temp.linux-armv7l-3.9/klustakwik2/numerics 2021-07-10T06:02:33,448 creating build/temp.linux-armv7l-3.9/klustakwik2/numerics/cylib 2021-07-10T06:02:33,449 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c klustakwik2/numerics/cylib/compute_cluster_masks_cy.c -o build/temp.linux-armv7l-3.9/klustakwik2/numerics/cylib/compute_cluster_masks_cy.o 2021-07-10T06:02:33,856 In file included from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1969, 2021-07-10T06:02:33,856 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2021-07-10T06:02:33,857 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/arrayobject.h:4, 2021-07-10T06:02:33,857 from klustakwik2/numerics/cylib/compute_cluster_masks_cy.c:625: 2021-07-10T06:02:33,857 /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2021-07-10T06:02:33,857 17 | #warning "Using deprecated NumPy API, disable it with " \ 2021-07-10T06:02:33,857 | ^~~~~~~ 2021-07-10T06:02:49,209 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/klustakwik2/numerics/cylib/compute_cluster_masks_cy.o -o build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib/compute_cluster_masks_cy.cpython-39-arm-linux-gnueabihf.so 2021-07-10T06:02:49,391 building 'klustakwik2.numerics.cylib.compute_cluster_penalties_cy' extension 2021-07-10T06:02:49,391 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c klustakwik2/numerics/cylib/compute_cluster_penalties_cy.c -o build/temp.linux-armv7l-3.9/klustakwik2/numerics/cylib/compute_cluster_penalties_cy.o 2021-07-10T06:02:49,764 In file included from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1969, 2021-07-10T06:02:49,765 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2021-07-10T06:02:49,765 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/arrayobject.h:4, 2021-07-10T06:02:49,765 from klustakwik2/numerics/cylib/compute_cluster_penalties_cy.c:625: 2021-07-10T06:02:49,765 /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2021-07-10T06:02:49,766 17 | #warning "Using deprecated NumPy API, disable it with " \ 2021-07-10T06:02:49,766 | ^~~~~~~ 2021-07-10T06:03:05,679 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/klustakwik2/numerics/cylib/compute_cluster_penalties_cy.o -o build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib/compute_cluster_penalties_cy.cpython-39-arm-linux-gnueabihf.so 2021-07-10T06:03:05,854 building 'klustakwik2.numerics.cylib.e_step_cy' extension 2021-07-10T06:03:05,854 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c klustakwik2/numerics/cylib/e_step_cy.cpp -o build/temp.linux-armv7l-3.9/klustakwik2/numerics/cylib/e_step_cy.o -fopenmp 2021-07-10T06:03:06,142 In file included from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1969, 2021-07-10T06:03:06,143 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2021-07-10T06:03:06,143 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/arrayobject.h:4, 2021-07-10T06:03:06,143 from klustakwik2/numerics/cylib/e_step_cy.cpp:640: 2021-07-10T06:03:06,143 /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2021-07-10T06:03:06,143 17 | #warning "Using deprecated NumPy API, disable it with " \ 2021-07-10T06:03:06,143 | ^~~~~~~ 2021-07-10T06:03:08,214 klustakwik2/numerics/cylib/e_step_cy.cpp: In function ‘int __Pyx_InitGlobals()’: 2021-07-10T06:03:08,214 klustakwik2/numerics/cylib/e_step_cy.cpp:29437:20: warning: ‘void PyEval_InitThreads()’ is deprecated [-Wdeprecated-declarations] 2021-07-10T06:03:08,214 29437 | PyEval_InitThreads(); 2021-07-10T06:03:08,215 | ^ 2021-07-10T06:03:08,215 In file included from /usr/include/python3.9/Python.h:145, 2021-07-10T06:03:08,215 from klustakwik2/numerics/cylib/e_step_cy.cpp:20: 2021-07-10T06:03:08,215 /usr/include/python3.9/ceval.h:130:37: note: declared here 2021-07-10T06:03:08,215 130 | Py_DEPRECATED(3.9) PyAPI_FUNC(void) PyEval_InitThreads(void); 2021-07-10T06:03:08,215 | ^~~~~~~~~~~~~~~~~~ 2021-07-10T06:03:37,182 arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/klustakwik2/numerics/cylib/e_step_cy.o -o build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib/e_step_cy.cpython-39-arm-linux-gnueabihf.so -fopenmp 2021-07-10T06:03:37,514 building 'klustakwik2.numerics.cylib.m_step_cy' extension 2021-07-10T06:03:37,514 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c klustakwik2/numerics/cylib/m_step_cy.c -o build/temp.linux-armv7l-3.9/klustakwik2/numerics/cylib/m_step_cy.o 2021-07-10T06:03:37,898 In file included from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1969, 2021-07-10T06:03:37,898 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2021-07-10T06:03:37,898 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/arrayobject.h:4, 2021-07-10T06:03:37,898 from klustakwik2/numerics/cylib/m_step_cy.c:625: 2021-07-10T06:03:37,898 /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2021-07-10T06:03:37,899 17 | #warning "Using deprecated NumPy API, disable it with " \ 2021-07-10T06:03:37,899 | ^~~~~~~ 2021-07-10T06:04:05,427 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/klustakwik2/numerics/cylib/m_step_cy.o -o build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib/m_step_cy.cpython-39-arm-linux-gnueabihf.so 2021-07-10T06:04:05,638 building 'klustakwik2.numerics.cylib.masks_cy' extension 2021-07-10T06:04:05,639 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c klustakwik2/numerics/cylib/masks_cy.cpp -o build/temp.linux-armv7l-3.9/klustakwik2/numerics/cylib/masks_cy.o 2021-07-10T06:04:05,917 In file included from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1969, 2021-07-10T06:04:05,917 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2021-07-10T06:04:05,918 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/arrayobject.h:4, 2021-07-10T06:04:05,918 from klustakwik2/numerics/cylib/masks_cy.cpp:640: 2021-07-10T06:04:05,918 /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2021-07-10T06:04:05,918 17 | #warning "Using deprecated NumPy API, disable it with " \ 2021-07-10T06:04:05,918 | ^~~~~~~ 2021-07-10T06:04:07,276 klustakwik2/numerics/cylib/masks_cy.cpp: In function ‘PyObject* __pyx_fuse_0__pyx_f_11klustakwik2_8numerics_5cylib_8masks_cy_do_mask_starts(__Pyx_memviewslice, __Pyx_memviewslice, __Pyx_memviewslice, __Pyx_memviewslice, __Pyx_memviewslice, short int, short int, int)’: 2021-07-10T06:04:07,276 klustakwik2/numerics/cylib/masks_cy.cpp:4649:39: warning: comparison of integer expressions of different signedness: ‘short int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2021-07-10T06:04:07,277 4649 | for (__pyx_t_9 = 0; __pyx_t_9 < __pyx_t_11; __pyx_t_9+=1) { 2021-07-10T06:04:07,277 | ~~~~~~~~~~^~~~~~~~~~~~ 2021-07-10T06:04:07,316 klustakwik2/numerics/cylib/masks_cy.cpp: In function ‘PyObject* __pyx_fuse_1__pyx_f_11klustakwik2_8numerics_5cylib_8masks_cy_do_mask_starts(__Pyx_memviewslice, __Pyx_memviewslice, __Pyx_memviewslice, __Pyx_memviewslice, __Pyx_memviewslice, int, int, int)’: 2021-07-10T06:04:07,316 klustakwik2/numerics/cylib/masks_cy.cpp:5310:39: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2021-07-10T06:04:07,316 5310 | for (__pyx_t_9 = 0; __pyx_t_9 < __pyx_t_11; __pyx_t_9+=1) { 2021-07-10T06:04:07,316 | ~~~~~~~~~~^~~~~~~~~~~~ 2021-07-10T06:04:07,353 klustakwik2/numerics/cylib/masks_cy.cpp: In function ‘PyObject* __pyx_fuse_2__pyx_f_11klustakwik2_8numerics_5cylib_8masks_cy_do_mask_starts(__Pyx_memviewslice, __Pyx_memviewslice, __Pyx_memviewslice, __Pyx_memviewslice, __Pyx_memviewslice, long int, long int, int)’: 2021-07-10T06:04:07,354 klustakwik2/numerics/cylib/masks_cy.cpp:5971:39: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2021-07-10T06:04:07,354 5971 | for (__pyx_t_9 = 0; __pyx_t_9 < __pyx_t_11; __pyx_t_9+=1) { 2021-07-10T06:04:07,354 | ~~~~~~~~~~^~~~~~~~~~~~ 2021-07-10T06:04:24,651 arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/klustakwik2/numerics/cylib/masks_cy.o -o build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib/masks_cy.cpython-39-arm-linux-gnueabihf.so 2021-07-10T06:04:24,993 installing to build/bdist.linux-armv7l/wheel 2021-07-10T06:04:24,994 running install 2021-07-10T06:04:24,995 running install_lib 2021-07-10T06:04:25,066 creating build/bdist.linux-armv7l 2021-07-10T06:04:25,072 creating build/bdist.linux-armv7l/wheel 2021-07-10T06:04:25,077 creating build/bdist.linux-armv7l/wheel/klustakwik2 2021-07-10T06:04:25,084 creating build/bdist.linux-armv7l/wheel/klustakwik2/numerics 2021-07-10T06:04:25,086 creating build/bdist.linux-armv7l/wheel/klustakwik2/numerics/cylib 2021-07-10T06:04:25,088 copying build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib/compute_cluster_masks_cy.pyx -> build/bdist.linux-armv7l/wheel/klustakwik2/numerics/cylib 2021-07-10T06:04:25,091 copying build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib/e_step.py -> build/bdist.linux-armv7l/wheel/klustakwik2/numerics/cylib 2021-07-10T06:04:25,094 copying build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib/compute_cluster_penalties_cy.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/klustakwik2/numerics/cylib 2021-07-10T06:04:25,124 copying build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib/compute_cluster_masks_cy.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/klustakwik2/numerics/cylib 2021-07-10T06:04:25,152 copying build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib/compute_cluster_masks.py -> build/bdist.linux-armv7l/wheel/klustakwik2/numerics/cylib 2021-07-10T06:04:25,154 copying build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib/e_step_cy.cpp -> build/bdist.linux-armv7l/wheel/klustakwik2/numerics/cylib 2021-07-10T06:04:25,193 copying build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib/masks_cy.cpp -> build/bdist.linux-armv7l/wheel/klustakwik2/numerics/cylib 2021-07-10T06:04:25,218 copying build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib/masks.py -> build/bdist.linux-armv7l/wheel/klustakwik2/numerics/cylib 2021-07-10T06:04:25,220 copying build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib/masks_cy.pyx -> build/bdist.linux-armv7l/wheel/klustakwik2/numerics/cylib 2021-07-10T06:04:25,222 copying build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib/e_step_cy.pyx -> build/bdist.linux-armv7l/wheel/klustakwik2/numerics/cylib 2021-07-10T06:04:25,224 copying build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib/compute_cluster_penalties_cy.c -> build/bdist.linux-armv7l/wheel/klustakwik2/numerics/cylib 2021-07-10T06:04:25,250 copying build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib/m_step_cy.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/klustakwik2/numerics/cylib 2021-07-10T06:04:25,291 copying build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib/compute_cluster_penalties.py -> build/bdist.linux-armv7l/wheel/klustakwik2/numerics/cylib 2021-07-10T06:04:25,292 copying build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib/e_step_cy.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/klustakwik2/numerics/cylib 2021-07-10T06:04:25,333 copying build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib/compute_cluster_penalties_cy.pyx -> build/bdist.linux-armv7l/wheel/klustakwik2/numerics/cylib 2021-07-10T06:04:25,335 copying build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib/m_step_cy.pyx -> build/bdist.linux-armv7l/wheel/klustakwik2/numerics/cylib 2021-07-10T06:04:25,337 copying build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib/m_step_cy.c -> build/bdist.linux-armv7l/wheel/klustakwik2/numerics/cylib 2021-07-10T06:04:25,383 copying build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib/m_step.py -> build/bdist.linux-armv7l/wheel/klustakwik2/numerics/cylib 2021-07-10T06:04:25,385 copying build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib/compute_cluster_masks_cy.c -> build/bdist.linux-armv7l/wheel/klustakwik2/numerics/cylib 2021-07-10T06:04:25,412 copying build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib/masks_cy.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/klustakwik2/numerics/cylib 2021-07-10T06:04:25,443 copying build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib/__init__.py -> build/bdist.linux-armv7l/wheel/klustakwik2/numerics/cylib 2021-07-10T06:04:25,446 creating build/bdist.linux-armv7l/wheel/klustakwik2/numerics/numbalib 2021-07-10T06:04:25,447 copying build/lib.linux-armv7l-3.9/klustakwik2/numerics/numbalib/m_step.py -> build/bdist.linux-armv7l/wheel/klustakwik2/numerics/numbalib 2021-07-10T06:04:25,449 copying build/lib.linux-armv7l-3.9/klustakwik2/numerics/numbalib/__init__.py -> build/bdist.linux-armv7l/wheel/klustakwik2/numerics/numbalib 2021-07-10T06:04:25,451 copying build/lib.linux-armv7l-3.9/klustakwik2/numerics/__init__.py -> build/bdist.linux-armv7l/wheel/klustakwik2/numerics 2021-07-10T06:04:25,453 copying build/lib.linux-armv7l-3.9/klustakwik2/monitoring.py -> build/bdist.linux-armv7l/wheel/klustakwik2 2021-07-10T06:04:25,457 creating build/bdist.linux-armv7l/wheel/klustakwik2/scripts 2021-07-10T06:04:25,457 copying build/lib.linux-armv7l-3.9/klustakwik2/scripts/kk2_legacy.py -> build/bdist.linux-armv7l/wheel/klustakwik2/scripts 2021-07-10T06:04:25,460 copying build/lib.linux-armv7l-3.9/klustakwik2/scripts/tools.py -> build/bdist.linux-armv7l/wheel/klustakwik2/scripts 2021-07-10T06:04:25,462 copying build/lib.linux-armv7l-3.9/klustakwik2/scripts/__init__.py -> build/bdist.linux-armv7l/wheel/klustakwik2/scripts 2021-07-10T06:04:25,464 creating build/bdist.linux-armv7l/wheel/klustakwik2/tests 2021-07-10T06:04:25,465 copying build/lib.linux-armv7l-3.9/klustakwik2/tests/test_compute_cluster_masks.py -> build/bdist.linux-armv7l/wheel/klustakwik2/tests 2021-07-10T06:04:25,467 copying build/lib.linux-armv7l-3.9/klustakwik2/tests/test_io.py -> build/bdist.linux-armv7l/wheel/klustakwik2/tests 2021-07-10T06:04:25,469 copying build/lib.linux-armv7l-3.9/klustakwik2/tests/test_compute_covariance_matrix.py -> build/bdist.linux-armv7l/wheel/klustakwik2/tests 2021-07-10T06:04:25,471 copying build/lib.linux-armv7l-3.9/klustakwik2/tests/test_partitioning.py -> build/bdist.linux-armv7l/wheel/klustakwik2/tests 2021-07-10T06:04:25,473 copying build/lib.linux-armv7l-3.9/klustakwik2/tests/test_synthetic_data.py -> build/bdist.linux-armv7l/wheel/klustakwik2/tests 2021-07-10T06:04:25,476 copying build/lib.linux-armv7l-3.9/klustakwik2/tests/test_mask_starts.py -> build/bdist.linux-armv7l/wheel/klustakwik2/tests 2021-07-10T06:04:25,478 copying build/lib.linux-armv7l-3.9/klustakwik2/tests/test_linear_algebra.py -> build/bdist.linux-armv7l/wheel/klustakwik2/tests 2021-07-10T06:04:25,480 copying build/lib.linux-armv7l-3.9/klustakwik2/tests/__init__.py -> build/bdist.linux-armv7l/wheel/klustakwik2/tests 2021-07-10T06:04:25,482 copying build/lib.linux-armv7l-3.9/klustakwik2/logger.py -> build/bdist.linux-armv7l/wheel/klustakwik2 2021-07-10T06:04:25,484 copying build/lib.linux-armv7l-3.9/klustakwik2/data.py -> build/bdist.linux-armv7l/wheel/klustakwik2 2021-07-10T06:04:25,486 copying build/lib.linux-armv7l-3.9/klustakwik2/default_parameters.py -> build/bdist.linux-armv7l/wheel/klustakwik2 2021-07-10T06:04:25,488 copying build/lib.linux-armv7l-3.9/klustakwik2/precomputations.py -> build/bdist.linux-armv7l/wheel/klustakwik2 2021-07-10T06:04:25,490 copying build/lib.linux-armv7l-3.9/klustakwik2/debugtools.py -> build/bdist.linux-armv7l/wheel/klustakwik2 2021-07-10T06:04:25,492 copying build/lib.linux-armv7l-3.9/klustakwik2/mask_starts.py -> build/bdist.linux-armv7l/wheel/klustakwik2 2021-07-10T06:04:25,495 copying build/lib.linux-armv7l-3.9/klustakwik2/input_output.py -> build/bdist.linux-armv7l/wheel/klustakwik2 2021-07-10T06:04:25,497 copying build/lib.linux-armv7l-3.9/klustakwik2/linear_algebra.py -> build/bdist.linux-armv7l/wheel/klustakwik2 2021-07-10T06:04:25,499 copying build/lib.linux-armv7l-3.9/klustakwik2/__init__.py -> build/bdist.linux-armv7l/wheel/klustakwik2 2021-07-10T06:04:25,501 copying build/lib.linux-armv7l-3.9/klustakwik2/clustering.py -> build/bdist.linux-armv7l/wheel/klustakwik2 2021-07-10T06:04:25,504 running install_egg_info 2021-07-10T06:04:25,510 Copying klustakwik2.egg-info to build/bdist.linux-armv7l/wheel/klustakwik2-0.2.2-py3.9.egg-info 2021-07-10T06:04:25,524 running install_scripts 2021-07-10T06:04:25,565 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2021-07-10T06:04:25,569 creating build/bdist.linux-armv7l/wheel/klustakwik2-0.2.2.dist-info/WHEEL 2021-07-10T06:04:25,572 creating '/tmp/pip-wheel-ruekhza9/klustakwik2-0.2.2-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2021-07-10T06:04:25,575 adding 'klustakwik2/__init__.py' 2021-07-10T06:04:25,580 adding 'klustakwik2/clustering.py' 2021-07-10T06:04:25,582 adding 'klustakwik2/data.py' 2021-07-10T06:04:25,583 adding 'klustakwik2/debugtools.py' 2021-07-10T06:04:25,585 adding 'klustakwik2/default_parameters.py' 2021-07-10T06:04:25,586 adding 'klustakwik2/input_output.py' 2021-07-10T06:04:25,588 adding 'klustakwik2/linear_algebra.py' 2021-07-10T06:04:25,589 adding 'klustakwik2/logger.py' 2021-07-10T06:04:25,590 adding 'klustakwik2/mask_starts.py' 2021-07-10T06:04:25,592 adding 'klustakwik2/monitoring.py' 2021-07-10T06:04:25,593 adding 'klustakwik2/precomputations.py' 2021-07-10T06:04:25,595 adding 'klustakwik2/numerics/__init__.py' 2021-07-10T06:04:25,597 adding 'klustakwik2/numerics/cylib/__init__.py' 2021-07-10T06:04:25,598 adding 'klustakwik2/numerics/cylib/compute_cluster_masks.py' 2021-07-10T06:04:25,681 adding 'klustakwik2/numerics/cylib/compute_cluster_masks_cy.c' 2021-07-10T06:04:25,893 adding 'klustakwik2/numerics/cylib/compute_cluster_masks_cy.cpython-39-arm-linux-gnueabihf.so' 2021-07-10T06:04:25,902 adding 'klustakwik2/numerics/cylib/compute_cluster_masks_cy.pyx' 2021-07-10T06:04:25,903 adding 'klustakwik2/numerics/cylib/compute_cluster_penalties.py' 2021-07-10T06:04:25,983 adding 'klustakwik2/numerics/cylib/compute_cluster_penalties_cy.c' 2021-07-10T06:04:26,200 adding 'klustakwik2/numerics/cylib/compute_cluster_penalties_cy.cpython-39-arm-linux-gnueabihf.so' 2021-07-10T06:04:26,209 adding 'klustakwik2/numerics/cylib/compute_cluster_penalties_cy.pyx' 2021-07-10T06:04:26,210 adding 'klustakwik2/numerics/cylib/e_step.py' 2021-07-10T06:04:26,321 adding 'klustakwik2/numerics/cylib/e_step_cy.cpp' 2021-07-10T06:04:26,625 adding 'klustakwik2/numerics/cylib/e_step_cy.cpython-39-arm-linux-gnueabihf.so' 2021-07-10T06:04:26,640 adding 'klustakwik2/numerics/cylib/e_step_cy.pyx' 2021-07-10T06:04:26,642 adding 'klustakwik2/numerics/cylib/m_step.py' 2021-07-10T06:04:26,743 adding 'klustakwik2/numerics/cylib/m_step_cy.c' 2021-07-10T06:04:27,041 adding 'klustakwik2/numerics/cylib/m_step_cy.cpython-39-arm-linux-gnueabihf.so' 2021-07-10T06:04:27,056 adding 'klustakwik2/numerics/cylib/m_step_cy.pyx' 2021-07-10T06:04:27,057 adding 'klustakwik2/numerics/cylib/masks.py' 2021-07-10T06:04:27,139 adding 'klustakwik2/numerics/cylib/masks_cy.cpp' 2021-07-10T06:04:27,391 adding 'klustakwik2/numerics/cylib/masks_cy.cpython-39-arm-linux-gnueabihf.so' 2021-07-10T06:04:27,403 adding 'klustakwik2/numerics/cylib/masks_cy.pyx' 2021-07-10T06:04:27,404 adding 'klustakwik2/numerics/numbalib/__init__.py' 2021-07-10T06:04:27,406 adding 'klustakwik2/numerics/numbalib/m_step.py' 2021-07-10T06:04:27,407 adding 'klustakwik2/scripts/__init__.py' 2021-07-10T06:04:27,409 adding 'klustakwik2/scripts/kk2_legacy.py' 2021-07-10T06:04:27,410 adding 'klustakwik2/scripts/tools.py' 2021-07-10T06:04:27,411 adding 'klustakwik2/tests/__init__.py' 2021-07-10T06:04:27,413 adding 'klustakwik2/tests/test_compute_cluster_masks.py' 2021-07-10T06:04:27,414 adding 'klustakwik2/tests/test_compute_covariance_matrix.py' 2021-07-10T06:04:27,415 adding 'klustakwik2/tests/test_io.py' 2021-07-10T06:04:27,416 adding 'klustakwik2/tests/test_linear_algebra.py' 2021-07-10T06:04:27,418 adding 'klustakwik2/tests/test_mask_starts.py' 2021-07-10T06:04:27,419 adding 'klustakwik2/tests/test_partitioning.py' 2021-07-10T06:04:27,420 adding 'klustakwik2/tests/test_synthetic_data.py' 2021-07-10T06:04:27,423 adding 'klustakwik2-0.2.2.dist-info/LICENSE' 2021-07-10T06:04:27,424 adding 'klustakwik2-0.2.2.dist-info/METADATA' 2021-07-10T06:04:27,425 adding 'klustakwik2-0.2.2.dist-info/WHEEL' 2021-07-10T06:04:27,426 adding 'klustakwik2-0.2.2.dist-info/entry_points.txt' 2021-07-10T06:04:27,427 adding 'klustakwik2-0.2.2.dist-info/top_level.txt' 2021-07-10T06:04:27,428 adding 'klustakwik2-0.2.2.dist-info/RECORD' 2021-07-10T06:04:27,478 removing build/bdist.linux-armv7l/wheel 2021-07-10T06:04:27,648 Building wheel for klustakwik2 (setup.py): finished with status 'done' 2021-07-10T06:04:27,690 Created wheel for klustakwik2: filename=klustakwik2-0.2.2-cp39-cp39-linux_armv7l.whl size=3063273 sha256=45eab1222e3ec38efdebac60e7ab50a2d4d5c791f77ee3761dd4358f93548f00 2021-07-10T06:04:27,690 Stored in directory: /tmp/pip-ephem-wheel-cache-p83_8551/wheels/19/0b/10/8ef95211809d35cb85d86e4316fa9caf8720a1fd606ba8eb65 2021-07-10T06:04:27,701 Successfully built klustakwik2 2021-07-10T06:04:27,814 Removed build tracker: '/tmp/pip-req-tracker-g8r11id5'