2021-07-10T06:45:06,389 Created temporary directory: /tmp/pip-ephem-wheel-cache-oc4bres3
2021-07-10T06:45:06,392 Created temporary directory: /tmp/pip-req-tracker-zeb6s59j
2021-07-10T06:45:06,392 Initialized build tracking at /tmp/pip-req-tracker-zeb6s59j
2021-07-10T06:45:06,393 Created build tracker: /tmp/pip-req-tracker-zeb6s59j
2021-07-10T06:45:06,393 Entered build tracker: /tmp/pip-req-tracker-zeb6s59j
2021-07-10T06:45:06,393 Created temporary directory: /tmp/pip-wheel-uok8i2qa
2021-07-10T06:45:06,426 1 location(s) to search for versions of klustakwik2:
2021-07-10T06:45:06,426 * https://pypi.org/simple/klustakwik2/
2021-07-10T06:45:06,427 Fetching project page and analyzing links: https://pypi.org/simple/klustakwik2/
2021-07-10T06:45:06,427 Getting page https://pypi.org/simple/klustakwik2/
2021-07-10T06:45:06,429 Found index url https://pypi.org/simple
2021-07-10T06:45:06,530   Found link https://files.pythonhosted.org/packages/1a/d6/c9974e8c616255af108f0d944a8f5ecf6d3546511e8804c3381c5577704a/klustakwik2-0.1.0b0.tar.bz2#sha256=36190f640cae42d9a4565b054ee7803b1fd7cd0d5f7e118e636c627ccd83c23d (from https://pypi.org/simple/klustakwik2/), version: 0.1.0b0
2021-07-10T06:45:06,530   Found link https://files.pythonhosted.org/packages/92/d6/a70199d4ba94ac3d18113cc615f9f95889a606638af61d501c3dc67e27ef/klustakwik2-0.1.0b0.tar.gz#sha256=e0b7638fc7dc24f7958cae9150d1587d3605aa26d38686d290ab483234d3740b (from https://pypi.org/simple/klustakwik2/), version: 0.1.0b0
2021-07-10T06:45:06,531   Found link https://files.pythonhosted.org/packages/67/ff/a61218f8963216650da5ee80c7ce41a1359e4ddfa67a99d1465cda1ed566/klustakwik2-0.1.0b0.zip#sha256=e0d0a0d49aadbcba24a5b7a1611d6c3e59649e7179838409cccfe93347b497c5 (from https://pypi.org/simple/klustakwik2/), version: 0.1.0b0
2021-07-10T06:45:06,531   Found link https://files.pythonhosted.org/packages/f7/e1/8d1f7c3e1c35cfa44178d4640d975527846bfcf41033d9c8fd4c736858b8/klustakwik2-0.1.0.tar.bz2#sha256=dd45c7a3d3540983c1f9ec2d9d733219df627be09e8878b10539db5e5c902e5c (from https://pypi.org/simple/klustakwik2/), version: 0.1.0
2021-07-10T06:45:06,531   Found link https://files.pythonhosted.org/packages/42/60/5650e90b5f10abcb632def27109eec5a07e0f7d9f4f6668b044228f4425e/klustakwik2-0.1.0.tar.gz#sha256=eb008772e88e920a775730d850234bc73877ce034d5b774bc7d79a69bee321bf (from https://pypi.org/simple/klustakwik2/), version: 0.1.0
2021-07-10T06:45:06,531   Found link https://files.pythonhosted.org/packages/10/40/65bb0d375a6bd5a3d16dd4de829748e0964b66e9e0ec41983c4eb3e7688c/klustakwik2-0.1.0.zip#sha256=ae033329ffa70206ec1922c9b4229c63efeec42410f02c537cf13888dee7ca8c (from https://pypi.org/simple/klustakwik2/), version: 0.1.0
2021-07-10T06:45:06,532   Found link https://files.pythonhosted.org/packages/1d/a3/0ae7f737ee55436826eb946e9112d926d8eb585c043c4c46018e426d2c96/klustakwik2-0.2.0.dev0.tar.bz2#sha256=a24f2eb7947d877cded15d6dfcb453452b61d4c944bee0f7c1904f399ba6be83 (from https://pypi.org/simple/klustakwik2/), version: 0.2.0.dev0
2021-07-10T06:45:06,532   Found link https://files.pythonhosted.org/packages/e8/22/58fa76b2af0b1ec5d002c825a054488a43e6bbfe57cb9770b179f92fb2c8/klustakwik2-0.2.0.dev0.tar.gz#sha256=67ad3a76da4eda184bfe5e5d90585e2bb05793515cdfa3e26d48bbd8fd1062ac (from https://pypi.org/simple/klustakwik2/), version: 0.2.0.dev0
2021-07-10T06:45:06,532   Found link https://files.pythonhosted.org/packages/17/5f/62f475d3df5478a036610fe2b731d5ae3e8e909429e0b9d2a9afa6cec3dd/klustakwik2-0.2.0.dev0.zip#sha256=844e20e921e6b9ce1b423a197488d404f294a8688113d015753c4c5a39772880 (from https://pypi.org/simple/klustakwik2/), version: 0.2.0.dev0
2021-07-10T06:45:06,533   Found link https://files.pythonhosted.org/packages/63/08/e757b5696add47bf7ab4862dbf4601049a364ef294fc32656ddc429e9595/klustakwik2-0.2.0.tar.bz2#sha256=783b87fc4d89816ea9d586171b2d9bc3026bee49a8f7cda407528747e383f746 (from https://pypi.org/simple/klustakwik2/), version: 0.2.0
2021-07-10T06:45:06,533   Found link https://files.pythonhosted.org/packages/28/eb/815bb83c5b164317f81dc5ab55c960517b84dfb601fc751cf30387080952/klustakwik2-0.2.0.tar.gz#sha256=3172b4a0756b5176d336af6e30a4c04a5dd27e39d8ecd0252e0008b0608847e0 (from https://pypi.org/simple/klustakwik2/), version: 0.2.0
2021-07-10T06:45:06,533   Found link https://files.pythonhosted.org/packages/7f/79/b506eaf810914722b74979b52d23b27ffd933c1e8ea7a5920240ffaa59eb/klustakwik2-0.2.0.zip#sha256=6e7b4227807baca9035ea87db5ef740a7247cc94cbcd0edf72fb4775db48fb79 (from https://pypi.org/simple/klustakwik2/), version: 0.2.0
2021-07-10T06:45:06,534   Found link https://files.pythonhosted.org/packages/3a/65/7f1597859f12bab5743ce39fc3bccffa895b499d56b76c80f67d686f9def/klustakwik2-0.2.1.tar.bz2#sha256=ffe4454baf70ae69476fbd3a70724605c74e29341c4559932f4e6f6ab2132a24 (from https://pypi.org/simple/klustakwik2/), version: 0.2.1
2021-07-10T06:45:06,534   Found link https://files.pythonhosted.org/packages/4e/4a/8ad93eda1789275fc2bd9793a2db6128e1aae7bdc8f1394271000e231ff4/klustakwik2-0.2.1.tar.gz#sha256=d3eb905aeca1127756d5babca411606acda70caddd65f0fdec75f5f85bdb05a0 (from https://pypi.org/simple/klustakwik2/), version: 0.2.1
2021-07-10T06:45:06,534   Found link https://files.pythonhosted.org/packages/bb/49/d2ce65bd43a1200ea59d0c9ec7dc4685961bf0c31bba895096e34d54267f/klustakwik2-0.2.1.zip#sha256=c7a3c4d078b1a7928d1449ab45b4848260bb7b020ec6d360662ef2fb04b74714 (from https://pypi.org/simple/klustakwik2/), version: 0.2.1
2021-07-10T06:45:06,534   Found link https://files.pythonhosted.org/packages/ec/a6/1fdd5fdae30662f38be1e2c1d3294694e3e31c573c5a9c142c6e3e09c5c6/klustakwik2-0.2.2.tar.bz2#sha256=54470d2f0c8b6c403d1011f0c36109125137ddb1d73a35aff8180a5cc816ceb9 (from https://pypi.org/simple/klustakwik2/), version: 0.2.2
2021-07-10T06:45:06,535   Found link https://files.pythonhosted.org/packages/68/45/6ec4583f79a6b4828390a85824c50473ebd9ffcaebb0c024e953ffb39ea2/klustakwik2-0.2.2.tar.gz#sha256=f825c55cdf2d3dab96ee1c0255ff78629c6f8a3dffd192a458a7fe93eda23957 (from https://pypi.org/simple/klustakwik2/), version: 0.2.2
2021-07-10T06:45:06,535   Found link https://files.pythonhosted.org/packages/e7/8c/a9f0f04b632db38004da1c9f20602388610e48fe142cbf9eb1e91626dd0f/klustakwik2-0.2.2.zip#sha256=f3489f7b0f7277b6017daf49cf500e700716b07ebd242f4f48b743faa43b377e (from https://pypi.org/simple/klustakwik2/), version: 0.2.2
2021-07-10T06:45:06,535   Found link https://files.pythonhosted.org/packages/da/c7/92e6d81a3b37f73384257723e81005ceb9ef51522167cf68efd04f0b9919/klustakwik2-0.2.3.tar.bz2#sha256=d1506e7607d0ed7a64fe829acd3328ddc640f402702f20f7ce3e29e37c407b26 (from https://pypi.org/simple/klustakwik2/), version: 0.2.3
2021-07-10T06:45:06,535   Found link https://files.pythonhosted.org/packages/44/02/5266a171217e49af76dfb8b98786f23fc3ffb0aa1019958c961969ae2043/klustakwik2-0.2.3.tar.gz#sha256=04d7166c3f364c2441c0312a892f152c436039f59f3a7fcefbc4cca10a160583 (from https://pypi.org/simple/klustakwik2/), version: 0.2.3
2021-07-10T06:45:06,536   Found link https://files.pythonhosted.org/packages/88/2c/b25b5efa3cc8167a28343d1cb80751761664b3c3b4cf8b398a3f616fb008/klustakwik2-0.2.3.zip#sha256=f53fb91310b0d47aaf0d1bc24690dd5dbe17c8e1c13f23cbb558d3fab127208d (from https://pypi.org/simple/klustakwik2/), version: 0.2.3
2021-07-10T06:45:06,536   Found link https://files.pythonhosted.org/packages/10/02/c786b26d177453450bd98f3608d5a7b7a08f6f3ff471114653829329b6e3/klustakwik2-0.2.4.tar.bz2#sha256=84acee4bb81418d9418791b282053e63aa2d2303e6bf1f54d53ca5a428da16b9 (from https://pypi.org/simple/klustakwik2/), version: 0.2.4
2021-07-10T06:45:06,536   Found link https://files.pythonhosted.org/packages/27/9b/39f9f939eef7492b936a1650056cb9bf3b925df4865ee51a3c615283c179/klustakwik2-0.2.4.tar.gz#sha256=fafcd4c8ec68fa4869c725c6f5ff14b3e3dde0686a875db53c699eb7d92d791a (from https://pypi.org/simple/klustakwik2/), version: 0.2.4
2021-07-10T06:45:06,536   Found link https://files.pythonhosted.org/packages/17/5e/e0cc4f3d7b0ef58e849e094f1ba6f93f1b8b9e4c2bdf6d6f3139046591aa/klustakwik2-0.2.4.zip#sha256=ba4c7412bceee00c946476f448cd6d46afcd55e2732f4797b84ab0697b253fe0 (from https://pypi.org/simple/klustakwik2/), version: 0.2.4
2021-07-10T06:45:06,554   Skipping link: none of the wheel's tags (cp35-cp35m-win_amd64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/9f/99/9374d711717c7ea4b4dbe7d069b3bf0c39ffd99dda9f728e756a22721ff7/klustakwik2-0.2.5-cp35-cp35m-win_amd64.whl#sha256=7bf7b1bce6350558803b8559495877cbd48833ef2e0098f11e134127ea347d1f (from https://pypi.org/simple/klustakwik2/)
2021-07-10T06:45:06,554   Found link https://files.pythonhosted.org/packages/5c/6d/b2d4c080aebafb6db4593fb468d71631bc4ca1e6a080f5c86d4b5a0aadfc/klustakwik2-0.2.5.tar.gz#sha256=60ea38620b2c7bd37df480f034f5b96837a907da709cf029db463f477e511a3f (from https://pypi.org/simple/klustakwik2/), version: 0.2.5
2021-07-10T06:45:06,555   Skipping link: none of the wheel's tags (cp27-cp27m-win_amd64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/cd/12/eb680c3ee6e3effba51a8539e90d1091edc260ecfbb71e5d5dd63537695f/klustakwik2-0.2.6-cp27-cp27m-win_amd64.whl#sha256=60c03fce4bb36425b3f69360d5b441048712d22d343ed98ea8cf609ec847ebb1 (from https://pypi.org/simple/klustakwik2/)
2021-07-10T06:45:06,555   Skipping link: none of the wheel's tags (cp35-cp35m-win_amd64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/ac/29/3964e52e5476c5912c52dd1c51979df0aad107efe2bbb8b9fe0bd362bdd2/klustakwik2-0.2.6-cp35-cp35m-win_amd64.whl#sha256=7e11788c1fe50078cfe563b26df630b5a1d09507fcdbedcc3d463958a09c7660 (from https://pypi.org/simple/klustakwik2/)
2021-07-10T06:45:06,556   Found link https://files.pythonhosted.org/packages/fc/65/d105474b087a7e4624e7200a753ec7b37b26d2f866e31b523ff24b366ec7/klustakwik2-0.2.6.zip#sha256=fa97e786dae2877da5a9ead6b5d3b6d63f93f67dc2113b7c13f7592df85eb062 (from https://pypi.org/simple/klustakwik2/), version: 0.2.6
2021-07-10T06:45:06,556   Skipping link: none of the wheel's tags (cp27-cp27m-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/1e/d2/85b391ecb17cfc75b2766aa3035b6b91cdd8ed3118676fa5f8cc46d8597d/klustakwik2-0.2.7-cp27-cp27m-manylinux1_x86_64.whl#sha256=2d9510048cc7b9cb5725ca8a2c44fdf5ad0db41fc96179a68314fe2b538caa24 (from https://pypi.org/simple/klustakwik2/)
2021-07-10T06:45:06,557   Skipping link: none of the wheel's tags (cp36-cp36m-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/6c/4d/840da8eb78038dec6c1b3ffdf02dfd30f02ad8c32ad64aae732c81df2f39/klustakwik2-0.2.7-cp36-cp36m-manylinux1_x86_64.whl#sha256=2c9821086513f4563446a0519181538aef08711a0a702a393ccacb7004244bcd (from https://pypi.org/simple/klustakwik2/)
2021-07-10T06:45:06,557   Skipping link: none of the wheel's tags (cp37-cp37m-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/ee/32/5c5d17c23af19bc85a7ad5a74d1a604d47de6761af88bcc2069eafb9b9c1/klustakwik2-0.2.7-cp37-cp37m-manylinux1_x86_64.whl#sha256=09c45022f11d5c6aaa1b05d43f6d32bfda1cf079fc38f0d18810d814914953f7 (from https://pypi.org/simple/klustakwik2/)
2021-07-10T06:45:06,557 Skipping link: not a file: https://pypi.org/simple/klustakwik2/
2021-07-10T06:45:06,561 Given no hashes to check 3 links for project 'klustakwik2': discarding no candidates
2021-07-10T06:45:06,581 Collecting klustakwik2==0.2.3
2021-07-10T06:45:06,582   Created temporary directory: /tmp/pip-unpack-q7wxneqe
2021-07-10T06:45:07,020   Downloading klustakwik2-0.2.3.zip (724 kB)
2021-07-10T06:45:07,377   Added klustakwik2==0.2.3 from https://files.pythonhosted.org/packages/88/2c/b25b5efa3cc8167a28343d1cb80751761664b3c3b4cf8b398a3f616fb008/klustakwik2-0.2.3.zip#sha256=f53fb91310b0d47aaf0d1bc24690dd5dbe17c8e1c13f23cbb558d3fab127208d to build tracker '/tmp/pip-req-tracker-zeb6s59j'
2021-07-10T06:45:07,378     Running setup.py (path:/tmp/pip-wheel-uok8i2qa/klustakwik2_e1e29071525046a8b16361ebabc6cf54/setup.py) egg_info for package klustakwik2
2021-07-10T06:45:07,379     Created temporary directory: /tmp/pip-pip-egg-info-brvl1u5_
2021-07-10T06:45:07,379     Running command python setup.py egg_info
2021-07-10T06:45:09,247     /usr/local/lib/python3.9/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-uok8i2qa/klustakwik2_e1e29071525046a8b16361ebabc6cf54/klustakwik2/numerics/cylib/compute_cluster_masks_cy.pyx
2021-07-10T06:45:09,248       tree = Parsing.p_module(s, pxd, full_module_name)
2021-07-10T06:45:16,567     /usr/local/lib/python3.9/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-uok8i2qa/klustakwik2_e1e29071525046a8b16361ebabc6cf54/klustakwik2/numerics/cylib/compute_cluster_penalties_cy.pyx
2021-07-10T06:45:16,568       tree = Parsing.p_module(s, pxd, full_module_name)
2021-07-10T06:45:23,685     /usr/local/lib/python3.9/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-uok8i2qa/klustakwik2_e1e29071525046a8b16361ebabc6cf54/klustakwik2/numerics/cylib/e_step_cy.pyx
2021-07-10T06:45:23,685       tree = Parsing.p_module(s, pxd, full_module_name)
2021-07-10T06:45:40,804     /usr/local/lib/python3.9/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-uok8i2qa/klustakwik2_e1e29071525046a8b16361ebabc6cf54/klustakwik2/numerics/cylib/m_step_cy.pyx
2021-07-10T06:45:40,804       tree = Parsing.p_module(s, pxd, full_module_name)
2021-07-10T06:45:51,338     /usr/local/lib/python3.9/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-uok8i2qa/klustakwik2_e1e29071525046a8b16361ebabc6cf54/klustakwik2/numerics/cylib/masks_cy.pyx
2021-07-10T06:45:51,338       tree = Parsing.p_module(s, pxd, full_module_name)
2021-07-10T06:45:58,720     Compiling klustakwik2/numerics/cylib/compute_cluster_masks_cy.pyx because it changed.
2021-07-10T06:45:58,720     Compiling klustakwik2/numerics/cylib/compute_cluster_penalties_cy.pyx because it changed.
2021-07-10T06:45:58,720     Compiling klustakwik2/numerics/cylib/e_step_cy.pyx because it changed.
2021-07-10T06:45:58,720     Compiling klustakwik2/numerics/cylib/m_step_cy.pyx because it changed.
2021-07-10T06:45:58,720     Compiling klustakwik2/numerics/cylib/masks_cy.pyx because it changed.
2021-07-10T06:45:58,721     [1/5] Cythonizing klustakwik2/numerics/cylib/compute_cluster_masks_cy.pyx
2021-07-10T06:45:58,721     [2/5] Cythonizing klustakwik2/numerics/cylib/compute_cluster_penalties_cy.pyx
2021-07-10T06:45:58,721     [3/5] Cythonizing klustakwik2/numerics/cylib/e_step_cy.pyx
2021-07-10T06:45:58,721     [4/5] Cythonizing klustakwik2/numerics/cylib/m_step_cy.pyx
2021-07-10T06:45:58,721     [5/5] Cythonizing klustakwik2/numerics/cylib/masks_cy.pyx
2021-07-10T06:45:58,872     running egg_info
2021-07-10T06:45:58,875     creating /tmp/pip-pip-egg-info-brvl1u5_/klustakwik2.egg-info
2021-07-10T06:45:58,875     writing /tmp/pip-pip-egg-info-brvl1u5_/klustakwik2.egg-info/PKG-INFO
2021-07-10T06:45:58,879     writing dependency_links to /tmp/pip-pip-egg-info-brvl1u5_/klustakwik2.egg-info/dependency_links.txt
2021-07-10T06:45:58,880     writing entry points to /tmp/pip-pip-egg-info-brvl1u5_/klustakwik2.egg-info/entry_points.txt
2021-07-10T06:45:58,881     writing top-level names to /tmp/pip-pip-egg-info-brvl1u5_/klustakwik2.egg-info/top_level.txt
2021-07-10T06:45:58,883     writing manifest file '/tmp/pip-pip-egg-info-brvl1u5_/klustakwik2.egg-info/SOURCES.txt'
2021-07-10T06:45:59,038     reading manifest file '/tmp/pip-pip-egg-info-brvl1u5_/klustakwik2.egg-info/SOURCES.txt'
2021-07-10T06:45:59,040     reading manifest template 'MANIFEST.in'
2021-07-10T06:45:59,055     warning: no files found matching '*.pyxbld' under directory 'klustakwik2/numerics/cylib'
2021-07-10T06:45:59,056     warning: no previously-included files matching '__pycache__' found under directory '*'
2021-07-10T06:45:59,056     warning: no previously-included files matching '*.py[co]' found under directory '*'
2021-07-10T06:45:59,056     adding license file 'LICENSE'
2021-07-10T06:45:59,060     writing manifest file '/tmp/pip-pip-egg-info-brvl1u5_/klustakwik2.egg-info/SOURCES.txt'
2021-07-10T06:45:59,499   Source in /tmp/pip-wheel-uok8i2qa/klustakwik2_e1e29071525046a8b16361ebabc6cf54 has version 0.2.3, which satisfies requirement klustakwik2==0.2.3 from https://files.pythonhosted.org/packages/88/2c/b25b5efa3cc8167a28343d1cb80751761664b3c3b4cf8b398a3f616fb008/klustakwik2-0.2.3.zip#sha256=f53fb91310b0d47aaf0d1bc24690dd5dbe17c8e1c13f23cbb558d3fab127208d
2021-07-10T06:45:59,500   Removed klustakwik2==0.2.3 from https://files.pythonhosted.org/packages/88/2c/b25b5efa3cc8167a28343d1cb80751761664b3c3b4cf8b398a3f616fb008/klustakwik2-0.2.3.zip#sha256=f53fb91310b0d47aaf0d1bc24690dd5dbe17c8e1c13f23cbb558d3fab127208d from build tracker '/tmp/pip-req-tracker-zeb6s59j'
2021-07-10T06:45:59,504 Created temporary directory: /tmp/pip-unpack-2fkc5840
2021-07-10T06:45:59,505 Building wheels for collected packages: klustakwik2
2021-07-10T06:45:59,509   Created temporary directory: /tmp/pip-wheel-_6l1zch1
2021-07-10T06:45:59,510   Building wheel for klustakwik2 (setup.py): started
2021-07-10T06:45:59,510   Destination directory: /tmp/pip-wheel-_6l1zch1
2021-07-10T06:45:59,511   Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-uok8i2qa/klustakwik2_e1e29071525046a8b16361ebabc6cf54/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-uok8i2qa/klustakwik2_e1e29071525046a8b16361ebabc6cf54/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-_6l1zch1
2021-07-10T06:46:01,414   running bdist_wheel
2021-07-10T06:46:01,419   running build
2021-07-10T06:46:01,419   running build_py
2021-07-10T06:46:01,567   creating build
2021-07-10T06:46:01,568   creating build/lib.linux-armv7l-3.9
2021-07-10T06:46:01,569   creating build/lib.linux-armv7l-3.9/klustakwik2
2021-07-10T06:46:01,570   copying klustakwik2/__init__.py -> build/lib.linux-armv7l-3.9/klustakwik2
2021-07-10T06:46:01,572   copying klustakwik2/precomputations.py -> build/lib.linux-armv7l-3.9/klustakwik2
2021-07-10T06:46:01,574   copying klustakwik2/debugtools.py -> build/lib.linux-armv7l-3.9/klustakwik2
2021-07-10T06:46:01,576   copying klustakwik2/default_parameters.py -> build/lib.linux-armv7l-3.9/klustakwik2
2021-07-10T06:46:01,578   copying klustakwik2/input_output.py -> build/lib.linux-armv7l-3.9/klustakwik2
2021-07-10T06:46:01,581   copying klustakwik2/linear_algebra.py -> build/lib.linux-armv7l-3.9/klustakwik2
2021-07-10T06:46:01,583   copying klustakwik2/data.py -> build/lib.linux-armv7l-3.9/klustakwik2
2021-07-10T06:46:01,585   copying klustakwik2/clustering.py -> build/lib.linux-armv7l-3.9/klustakwik2
2021-07-10T06:46:01,588   copying klustakwik2/mask_starts.py -> build/lib.linux-armv7l-3.9/klustakwik2
2021-07-10T06:46:01,590   copying klustakwik2/logger.py -> build/lib.linux-armv7l-3.9/klustakwik2
2021-07-10T06:46:01,592   copying klustakwik2/monitoring.py -> build/lib.linux-armv7l-3.9/klustakwik2
2021-07-10T06:46:01,595   creating build/lib.linux-armv7l-3.9/klustakwik2/numerics
2021-07-10T06:46:01,597   copying klustakwik2/numerics/__init__.py -> build/lib.linux-armv7l-3.9/klustakwik2/numerics
2021-07-10T06:46:01,600   creating build/lib.linux-armv7l-3.9/klustakwik2/numerics/numbalib
2021-07-10T06:46:01,601   copying klustakwik2/numerics/numbalib/m_step.py -> build/lib.linux-armv7l-3.9/klustakwik2/numerics/numbalib
2021-07-10T06:46:01,603   copying klustakwik2/numerics/numbalib/__init__.py -> build/lib.linux-armv7l-3.9/klustakwik2/numerics/numbalib
2021-07-10T06:46:01,606   creating build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib
2021-07-10T06:46:01,607   copying klustakwik2/numerics/cylib/m_step.py -> build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib
2021-07-10T06:46:01,610   copying klustakwik2/numerics/cylib/e_step.py -> build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib
2021-07-10T06:46:01,612   copying klustakwik2/numerics/cylib/compute_cluster_penalties.py -> build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib
2021-07-10T06:46:01,615   copying klustakwik2/numerics/cylib/__init__.py -> build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib
2021-07-10T06:46:01,617   copying klustakwik2/numerics/cylib/masks.py -> build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib
2021-07-10T06:46:01,619   copying klustakwik2/numerics/cylib/compute_cluster_masks.py -> build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib
2021-07-10T06:46:01,622   creating build/lib.linux-armv7l-3.9/klustakwik2/tests
2021-07-10T06:46:01,624   copying klustakwik2/tests/test_compute_cluster_masks.py -> build/lib.linux-armv7l-3.9/klustakwik2/tests
2021-07-10T06:46:01,626   copying klustakwik2/tests/test_compute_covariance_matrix.py -> build/lib.linux-armv7l-3.9/klustakwik2/tests
2021-07-10T06:46:01,628   copying klustakwik2/tests/test_io.py -> build/lib.linux-armv7l-3.9/klustakwik2/tests
2021-07-10T06:46:01,631   copying klustakwik2/tests/test_partitioning.py -> build/lib.linux-armv7l-3.9/klustakwik2/tests
2021-07-10T06:46:01,633   copying klustakwik2/tests/__init__.py -> build/lib.linux-armv7l-3.9/klustakwik2/tests
2021-07-10T06:46:01,635   copying klustakwik2/tests/test_linear_algebra.py -> build/lib.linux-armv7l-3.9/klustakwik2/tests
2021-07-10T06:46:01,637   copying klustakwik2/tests/test_synthetic_data.py -> build/lib.linux-armv7l-3.9/klustakwik2/tests
2021-07-10T06:46:01,640   copying klustakwik2/tests/test_mask_starts.py -> build/lib.linux-armv7l-3.9/klustakwik2/tests
2021-07-10T06:46:01,643   creating build/lib.linux-armv7l-3.9/klustakwik2/scripts
2021-07-10T06:46:01,644   copying klustakwik2/scripts/__init__.py -> build/lib.linux-armv7l-3.9/klustakwik2/scripts
2021-07-10T06:46:01,646   copying klustakwik2/scripts/kk2_legacy.py -> build/lib.linux-armv7l-3.9/klustakwik2/scripts
2021-07-10T06:46:01,647   copying klustakwik2/scripts/tools.py -> build/lib.linux-armv7l-3.9/klustakwik2/scripts
2021-07-10T06:46:01,649   running egg_info
2021-07-10T06:46:01,663   writing klustakwik2.egg-info/PKG-INFO
2021-07-10T06:46:01,666   writing dependency_links to klustakwik2.egg-info/dependency_links.txt
2021-07-10T06:46:01,667   writing entry points to klustakwik2.egg-info/entry_points.txt
2021-07-10T06:46:01,669   writing top-level names to klustakwik2.egg-info/top_level.txt
2021-07-10T06:46:01,680   reading manifest file 'klustakwik2.egg-info/SOURCES.txt'
2021-07-10T06:46:01,683   reading manifest template 'MANIFEST.in'
2021-07-10T06:46:01,696   warning: no files found matching '*.pyxbld' under directory 'klustakwik2/numerics/cylib'
2021-07-10T06:46:01,697   warning: no previously-included files matching '__pycache__' found under directory '*'
2021-07-10T06:46:01,697   warning: no previously-included files matching '*.py[co]' found under directory '*'
2021-07-10T06:46:01,698   adding license file 'LICENSE'
2021-07-10T06:46:01,702   writing manifest file 'klustakwik2.egg-info/SOURCES.txt'
2021-07-10T06:46:01,706   copying klustakwik2/numerics/cylib/compute_cluster_masks_cy.c -> build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib
2021-07-10T06:46:01,730   copying klustakwik2/numerics/cylib/compute_cluster_masks_cy.pyx -> build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib
2021-07-10T06:46:01,732   copying klustakwik2/numerics/cylib/compute_cluster_penalties_cy.c -> build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib
2021-07-10T06:46:01,758   copying klustakwik2/numerics/cylib/compute_cluster_penalties_cy.pyx -> build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib
2021-07-10T06:46:01,760   copying klustakwik2/numerics/cylib/e_step_cy.cpp -> build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib
2021-07-10T06:46:01,794   copying klustakwik2/numerics/cylib/e_step_cy.pyx -> build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib
2021-07-10T06:46:01,796   copying klustakwik2/numerics/cylib/m_step_cy.c -> build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib
2021-07-10T06:46:01,832   copying klustakwik2/numerics/cylib/m_step_cy.pyx -> build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib
2021-07-10T06:46:01,834   copying klustakwik2/numerics/cylib/masks_cy.cpp -> build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib
2021-07-10T06:46:01,861   copying klustakwik2/numerics/cylib/masks_cy.pyx -> build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib
2021-07-10T06:46:01,868   running build_ext
2021-07-10T06:46:01,873   building 'klustakwik2.numerics.cylib.compute_cluster_masks_cy' extension
2021-07-10T06:46:01,873   creating build/temp.linux-armv7l-3.9
2021-07-10T06:46:01,874   creating build/temp.linux-armv7l-3.9/klustakwik2
2021-07-10T06:46:01,874   creating build/temp.linux-armv7l-3.9/klustakwik2/numerics
2021-07-10T06:46:01,875   creating build/temp.linux-armv7l-3.9/klustakwik2/numerics/cylib
2021-07-10T06:46:01,876   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c klustakwik2/numerics/cylib/compute_cluster_masks_cy.c -o build/temp.linux-armv7l-3.9/klustakwik2/numerics/cylib/compute_cluster_masks_cy.o
2021-07-10T06:46:02,281   In file included from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1969,
2021-07-10T06:46:02,282                    from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2021-07-10T06:46:02,282                    from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
2021-07-10T06:46:02,282                    from klustakwik2/numerics/cylib/compute_cluster_masks_cy.c:625:
2021-07-10T06:46:02,282   /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2021-07-10T06:46:02,282      17 | #warning "Using deprecated NumPy API, disable it with " \
2021-07-10T06:46:02,282         |  ^~~~~~~
2021-07-10T06:46:17,683   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/klustakwik2/numerics/cylib/compute_cluster_masks_cy.o -o build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib/compute_cluster_masks_cy.cpython-39-arm-linux-gnueabihf.so
2021-07-10T06:46:17,859   building 'klustakwik2.numerics.cylib.compute_cluster_penalties_cy' extension
2021-07-10T06:46:17,859   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c klustakwik2/numerics/cylib/compute_cluster_penalties_cy.c -o build/temp.linux-armv7l-3.9/klustakwik2/numerics/cylib/compute_cluster_penalties_cy.o
2021-07-10T06:46:18,242   In file included from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1969,
2021-07-10T06:46:18,243                    from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2021-07-10T06:46:18,243                    from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
2021-07-10T06:46:18,243                    from klustakwik2/numerics/cylib/compute_cluster_penalties_cy.c:625:
2021-07-10T06:46:18,243   /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2021-07-10T06:46:18,243      17 | #warning "Using deprecated NumPy API, disable it with " \
2021-07-10T06:46:18,244         |  ^~~~~~~
2021-07-10T06:46:34,166   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/klustakwik2/numerics/cylib/compute_cluster_penalties_cy.o -o build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib/compute_cluster_penalties_cy.cpython-39-arm-linux-gnueabihf.so
2021-07-10T06:46:34,341   building 'klustakwik2.numerics.cylib.e_step_cy' extension
2021-07-10T06:46:34,341   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c klustakwik2/numerics/cylib/e_step_cy.cpp -o build/temp.linux-armv7l-3.9/klustakwik2/numerics/cylib/e_step_cy.o -fopenmp
2021-07-10T06:46:34,633   In file included from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1969,
2021-07-10T06:46:34,634                    from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2021-07-10T06:46:34,634                    from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
2021-07-10T06:46:34,634                    from klustakwik2/numerics/cylib/e_step_cy.cpp:640:
2021-07-10T06:46:34,634   /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2021-07-10T06:46:34,634      17 | #warning "Using deprecated NumPy API, disable it with " \
2021-07-10T06:46:34,634         |  ^~~~~~~
2021-07-10T06:46:36,706   klustakwik2/numerics/cylib/e_step_cy.cpp: In function ‘int __Pyx_InitGlobals()’:
2021-07-10T06:46:36,706   klustakwik2/numerics/cylib/e_step_cy.cpp:29437:20: warning: ‘void PyEval_InitThreads()’ is deprecated [-Wdeprecated-declarations]
2021-07-10T06:46:36,707   29437 | PyEval_InitThreads();
2021-07-10T06:46:36,707         |                    ^
2021-07-10T06:46:36,707   In file included from /usr/include/python3.9/Python.h:145,
2021-07-10T06:46:36,708                    from klustakwik2/numerics/cylib/e_step_cy.cpp:20:
2021-07-10T06:46:36,708   /usr/include/python3.9/ceval.h:130:37: note: declared here
2021-07-10T06:46:36,708     130 | Py_DEPRECATED(3.9) PyAPI_FUNC(void) PyEval_InitThreads(void);
2021-07-10T06:46:36,708         |                                     ^~~~~~~~~~~~~~~~~~
2021-07-10T06:47:05,618   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/klustakwik2/numerics/cylib/e_step_cy.o -o build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib/e_step_cy.cpython-39-arm-linux-gnueabihf.so -fopenmp
2021-07-10T06:47:05,874   building 'klustakwik2.numerics.cylib.m_step_cy' extension
2021-07-10T06:47:05,874   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c klustakwik2/numerics/cylib/m_step_cy.c -o build/temp.linux-armv7l-3.9/klustakwik2/numerics/cylib/m_step_cy.o
2021-07-10T06:47:06,267   In file included from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1969,
2021-07-10T06:47:06,267                    from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2021-07-10T06:47:06,267                    from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
2021-07-10T06:47:06,267                    from klustakwik2/numerics/cylib/m_step_cy.c:625:
2021-07-10T06:47:06,267   /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2021-07-10T06:47:06,268      17 | #warning "Using deprecated NumPy API, disable it with " \
2021-07-10T06:47:06,268         |  ^~~~~~~
2021-07-10T06:47:34,225   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/klustakwik2/numerics/cylib/m_step_cy.o -o build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib/m_step_cy.cpython-39-arm-linux-gnueabihf.so
2021-07-10T06:47:34,444   building 'klustakwik2.numerics.cylib.masks_cy' extension
2021-07-10T06:47:34,444   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c klustakwik2/numerics/cylib/masks_cy.cpp -o build/temp.linux-armv7l-3.9/klustakwik2/numerics/cylib/masks_cy.o
2021-07-10T06:47:34,733   In file included from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1969,
2021-07-10T06:47:34,733                    from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2021-07-10T06:47:34,733                    from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
2021-07-10T06:47:34,733                    from klustakwik2/numerics/cylib/masks_cy.cpp:640:
2021-07-10T06:47:34,733   /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2021-07-10T06:47:34,733      17 | #warning "Using deprecated NumPy API, disable it with " \
2021-07-10T06:47:34,734         |  ^~~~~~~
2021-07-10T06:47:36,073   klustakwik2/numerics/cylib/masks_cy.cpp: In function ‘PyObject* __pyx_fuse_0__pyx_f_11klustakwik2_8numerics_5cylib_8masks_cy_do_mask_starts(__Pyx_memviewslice, __Pyx_memviewslice, __Pyx_memviewslice, __Pyx_memviewslice, __Pyx_memviewslice, short int, short int, int)’:
2021-07-10T06:47:36,073   klustakwik2/numerics/cylib/masks_cy.cpp:4649:39: warning: comparison of integer expressions of different signedness: ‘short int’ and ‘std::vector<short int>::size_type’ {aka ‘unsigned int’} [-Wsign-compare]
2021-07-10T06:47:36,074    4649 |         for (__pyx_t_9 = 0; __pyx_t_9 < __pyx_t_11; __pyx_t_9+=1) {
2021-07-10T06:47:36,074         |                             ~~~~~~~~~~^~~~~~~~~~~~
2021-07-10T06:47:36,113   klustakwik2/numerics/cylib/masks_cy.cpp: In function ‘PyObject* __pyx_fuse_1__pyx_f_11klustakwik2_8numerics_5cylib_8masks_cy_do_mask_starts(__Pyx_memviewslice, __Pyx_memviewslice, __Pyx_memviewslice, __Pyx_memviewslice, __Pyx_memviewslice, int, int, int)’:
2021-07-10T06:47:36,113   klustakwik2/numerics/cylib/masks_cy.cpp:5310:39: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<int>::size_type’ {aka ‘unsigned int’} [-Wsign-compare]
2021-07-10T06:47:36,114    5310 |         for (__pyx_t_9 = 0; __pyx_t_9 < __pyx_t_11; __pyx_t_9+=1) {
2021-07-10T06:47:36,114         |                             ~~~~~~~~~~^~~~~~~~~~~~
2021-07-10T06:47:36,150   klustakwik2/numerics/cylib/masks_cy.cpp: In function ‘PyObject* __pyx_fuse_2__pyx_f_11klustakwik2_8numerics_5cylib_8masks_cy_do_mask_starts(__Pyx_memviewslice, __Pyx_memviewslice, __Pyx_memviewslice, __Pyx_memviewslice, __Pyx_memviewslice, long int, long int, int)’:
2021-07-10T06:47:36,151   klustakwik2/numerics/cylib/masks_cy.cpp:5971:39: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::vector<long int>::size_type’ {aka ‘unsigned int’} [-Wsign-compare]
2021-07-10T06:47:36,151    5971 |         for (__pyx_t_9 = 0; __pyx_t_9 < __pyx_t_11; __pyx_t_9+=1) {
2021-07-10T06:47:36,151         |                             ~~~~~~~~~~^~~~~~~~~~~~
2021-07-10T06:47:53,513   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/klustakwik2/numerics/cylib/masks_cy.o -o build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib/masks_cy.cpython-39-arm-linux-gnueabihf.so
2021-07-10T06:47:53,859   installing to build/bdist.linux-armv7l/wheel
2021-07-10T06:47:53,859   running install
2021-07-10T06:47:53,860   running install_lib
2021-07-10T06:47:53,865   creating build/bdist.linux-armv7l
2021-07-10T06:47:53,865   creating build/bdist.linux-armv7l/wheel
2021-07-10T06:47:53,867   creating build/bdist.linux-armv7l/wheel/klustakwik2
2021-07-10T06:47:53,869   creating build/bdist.linux-armv7l/wheel/klustakwik2/numerics
2021-07-10T06:47:53,871   creating build/bdist.linux-armv7l/wheel/klustakwik2/numerics/numbalib
2021-07-10T06:47:53,872   copying build/lib.linux-armv7l-3.9/klustakwik2/numerics/numbalib/m_step.py -> build/bdist.linux-armv7l/wheel/klustakwik2/numerics/numbalib
2021-07-10T06:47:53,875   copying build/lib.linux-armv7l-3.9/klustakwik2/numerics/numbalib/__init__.py -> build/bdist.linux-armv7l/wheel/klustakwik2/numerics/numbalib
2021-07-10T06:47:53,877   copying build/lib.linux-armv7l-3.9/klustakwik2/numerics/__init__.py -> build/bdist.linux-armv7l/wheel/klustakwik2/numerics
2021-07-10T06:47:53,880   creating build/bdist.linux-armv7l/wheel/klustakwik2/numerics/cylib
2021-07-10T06:47:53,881   copying build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib/masks_cy.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/klustakwik2/numerics/cylib
2021-07-10T06:47:53,916   copying build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib/m_step.py -> build/bdist.linux-armv7l/wheel/klustakwik2/numerics/cylib
2021-07-10T06:47:53,918   copying build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib/e_step_cy.cpp -> build/bdist.linux-armv7l/wheel/klustakwik2/numerics/cylib
2021-07-10T06:47:53,956   copying build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib/e_step.py -> build/bdist.linux-armv7l/wheel/klustakwik2/numerics/cylib
2021-07-10T06:47:53,958   copying build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib/compute_cluster_penalties.py -> build/bdist.linux-armv7l/wheel/klustakwik2/numerics/cylib
2021-07-10T06:47:53,960   copying build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib/__init__.py -> build/bdist.linux-armv7l/wheel/klustakwik2/numerics/cylib
2021-07-10T06:47:53,962   copying build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib/compute_cluster_penalties_cy.c -> build/bdist.linux-armv7l/wheel/klustakwik2/numerics/cylib
2021-07-10T06:47:53,990   copying build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib/e_step_cy.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/klustakwik2/numerics/cylib
2021-07-10T06:47:54,031   copying build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib/m_step_cy.pyx -> build/bdist.linux-armv7l/wheel/klustakwik2/numerics/cylib
2021-07-10T06:47:54,033   copying build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib/masks.py -> build/bdist.linux-armv7l/wheel/klustakwik2/numerics/cylib
2021-07-10T06:47:54,035   copying build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib/m_step_cy.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/klustakwik2/numerics/cylib
2021-07-10T06:47:54,076   copying build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib/masks_cy.cpp -> build/bdist.linux-armv7l/wheel/klustakwik2/numerics/cylib
2021-07-10T06:47:54,101   copying build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib/compute_cluster_masks_cy.c -> build/bdist.linux-armv7l/wheel/klustakwik2/numerics/cylib
2021-07-10T06:47:54,127   copying build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib/compute_cluster_masks_cy.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/klustakwik2/numerics/cylib
2021-07-10T06:47:54,152   copying build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib/masks_cy.pyx -> build/bdist.linux-armv7l/wheel/klustakwik2/numerics/cylib
2021-07-10T06:47:54,154   copying build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib/compute_cluster_masks_cy.pyx -> build/bdist.linux-armv7l/wheel/klustakwik2/numerics/cylib
2021-07-10T06:47:54,156   copying build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib/compute_cluster_penalties_cy.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/klustakwik2/numerics/cylib
2021-07-10T06:47:54,183   copying build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib/e_step_cy.pyx -> build/bdist.linux-armv7l/wheel/klustakwik2/numerics/cylib
2021-07-10T06:47:54,185   copying build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib/m_step_cy.c -> build/bdist.linux-armv7l/wheel/klustakwik2/numerics/cylib
2021-07-10T06:47:54,222   copying build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib/compute_cluster_penalties_cy.pyx -> build/bdist.linux-armv7l/wheel/klustakwik2/numerics/cylib
2021-07-10T06:47:54,224   copying build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib/compute_cluster_masks.py -> build/bdist.linux-armv7l/wheel/klustakwik2/numerics/cylib
2021-07-10T06:47:54,225   copying build/lib.linux-armv7l-3.9/klustakwik2/__init__.py -> build/bdist.linux-armv7l/wheel/klustakwik2
2021-07-10T06:47:54,227   copying build/lib.linux-armv7l-3.9/klustakwik2/precomputations.py -> build/bdist.linux-armv7l/wheel/klustakwik2
2021-07-10T06:47:54,229   copying build/lib.linux-armv7l-3.9/klustakwik2/debugtools.py -> build/bdist.linux-armv7l/wheel/klustakwik2
2021-07-10T06:47:54,231   copying build/lib.linux-armv7l-3.9/klustakwik2/default_parameters.py -> build/bdist.linux-armv7l/wheel/klustakwik2
2021-07-10T06:47:54,233   copying build/lib.linux-armv7l-3.9/klustakwik2/input_output.py -> build/bdist.linux-armv7l/wheel/klustakwik2
2021-07-10T06:47:54,236   copying build/lib.linux-armv7l-3.9/klustakwik2/linear_algebra.py -> build/bdist.linux-armv7l/wheel/klustakwik2
2021-07-10T06:47:54,238   copying build/lib.linux-armv7l-3.9/klustakwik2/data.py -> build/bdist.linux-armv7l/wheel/klustakwik2
2021-07-10T06:47:54,241   copying build/lib.linux-armv7l-3.9/klustakwik2/clustering.py -> build/bdist.linux-armv7l/wheel/klustakwik2
2021-07-10T06:47:54,245   creating build/bdist.linux-armv7l/wheel/klustakwik2/tests
2021-07-10T06:47:54,246   copying build/lib.linux-armv7l-3.9/klustakwik2/tests/test_compute_cluster_masks.py -> build/bdist.linux-armv7l/wheel/klustakwik2/tests
2021-07-10T06:47:54,249   copying build/lib.linux-armv7l-3.9/klustakwik2/tests/test_compute_covariance_matrix.py -> build/bdist.linux-armv7l/wheel/klustakwik2/tests
2021-07-10T06:47:54,251   copying build/lib.linux-armv7l-3.9/klustakwik2/tests/test_io.py -> build/bdist.linux-armv7l/wheel/klustakwik2/tests
2021-07-10T06:47:54,254   copying build/lib.linux-armv7l-3.9/klustakwik2/tests/test_partitioning.py -> build/bdist.linux-armv7l/wheel/klustakwik2/tests
2021-07-10T06:47:54,256   copying build/lib.linux-armv7l-3.9/klustakwik2/tests/__init__.py -> build/bdist.linux-armv7l/wheel/klustakwik2/tests
2021-07-10T06:47:54,258   copying build/lib.linux-armv7l-3.9/klustakwik2/tests/test_linear_algebra.py -> build/bdist.linux-armv7l/wheel/klustakwik2/tests
2021-07-10T06:47:54,260   copying build/lib.linux-armv7l-3.9/klustakwik2/tests/test_synthetic_data.py -> build/bdist.linux-armv7l/wheel/klustakwik2/tests
2021-07-10T06:47:54,262   copying build/lib.linux-armv7l-3.9/klustakwik2/tests/test_mask_starts.py -> build/bdist.linux-armv7l/wheel/klustakwik2/tests
2021-07-10T06:47:54,266   creating build/bdist.linux-armv7l/wheel/klustakwik2/scripts
2021-07-10T06:47:54,266   copying build/lib.linux-armv7l-3.9/klustakwik2/scripts/__init__.py -> build/bdist.linux-armv7l/wheel/klustakwik2/scripts
2021-07-10T06:47:54,269   copying build/lib.linux-armv7l-3.9/klustakwik2/scripts/kk2_legacy.py -> build/bdist.linux-armv7l/wheel/klustakwik2/scripts
2021-07-10T06:47:54,271   copying build/lib.linux-armv7l-3.9/klustakwik2/scripts/tools.py -> build/bdist.linux-armv7l/wheel/klustakwik2/scripts
2021-07-10T06:47:54,274   copying build/lib.linux-armv7l-3.9/klustakwik2/mask_starts.py -> build/bdist.linux-armv7l/wheel/klustakwik2
2021-07-10T06:47:54,277   copying build/lib.linux-armv7l-3.9/klustakwik2/logger.py -> build/bdist.linux-armv7l/wheel/klustakwik2
2021-07-10T06:47:54,279   copying build/lib.linux-armv7l-3.9/klustakwik2/monitoring.py -> build/bdist.linux-armv7l/wheel/klustakwik2
2021-07-10T06:47:54,281   running install_egg_info
2021-07-10T06:47:54,293   Copying klustakwik2.egg-info to build/bdist.linux-armv7l/wheel/klustakwik2-0.2.3-py3.9.egg-info
2021-07-10T06:47:54,311   running install_scripts
2021-07-10T06:47:54,361   adding license file "LICENSE" (matched pattern "LICEN[CS]E*")
2021-07-10T06:47:54,367   creating build/bdist.linux-armv7l/wheel/klustakwik2-0.2.3.dist-info/WHEEL
2021-07-10T06:47:54,370   creating '/tmp/pip-wheel-_6l1zch1/klustakwik2-0.2.3-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2021-07-10T06:47:54,374   adding 'klustakwik2/__init__.py'
2021-07-10T06:47:54,379   adding 'klustakwik2/clustering.py'
2021-07-10T06:47:54,382   adding 'klustakwik2/data.py'
2021-07-10T06:47:54,384   adding 'klustakwik2/debugtools.py'
2021-07-10T06:47:54,385   adding 'klustakwik2/default_parameters.py'
2021-07-10T06:47:54,387   adding 'klustakwik2/input_output.py'
2021-07-10T06:47:54,389   adding 'klustakwik2/linear_algebra.py'
2021-07-10T06:47:54,390   adding 'klustakwik2/logger.py'
2021-07-10T06:47:54,392   adding 'klustakwik2/mask_starts.py'
2021-07-10T06:47:54,394   adding 'klustakwik2/monitoring.py'
2021-07-10T06:47:54,396   adding 'klustakwik2/precomputations.py'
2021-07-10T06:47:54,398   adding 'klustakwik2/numerics/__init__.py'
2021-07-10T06:47:54,400   adding 'klustakwik2/numerics/cylib/__init__.py'
2021-07-10T06:47:54,402   adding 'klustakwik2/numerics/cylib/compute_cluster_masks.py'
2021-07-10T06:47:54,485   adding 'klustakwik2/numerics/cylib/compute_cluster_masks_cy.c'
2021-07-10T06:47:54,697   adding 'klustakwik2/numerics/cylib/compute_cluster_masks_cy.cpython-39-arm-linux-gnueabihf.so'
2021-07-10T06:47:54,706   adding 'klustakwik2/numerics/cylib/compute_cluster_masks_cy.pyx'
2021-07-10T06:47:54,707   adding 'klustakwik2/numerics/cylib/compute_cluster_penalties.py'
2021-07-10T06:47:54,787   adding 'klustakwik2/numerics/cylib/compute_cluster_penalties_cy.c'
2021-07-10T06:47:55,003   adding 'klustakwik2/numerics/cylib/compute_cluster_penalties_cy.cpython-39-arm-linux-gnueabihf.so'
2021-07-10T06:47:55,012   adding 'klustakwik2/numerics/cylib/compute_cluster_penalties_cy.pyx'
2021-07-10T06:47:55,014   adding 'klustakwik2/numerics/cylib/e_step.py'
2021-07-10T06:47:55,124   adding 'klustakwik2/numerics/cylib/e_step_cy.cpp'
2021-07-10T06:47:55,430   adding 'klustakwik2/numerics/cylib/e_step_cy.cpython-39-arm-linux-gnueabihf.so'
2021-07-10T06:47:55,445   adding 'klustakwik2/numerics/cylib/e_step_cy.pyx'
2021-07-10T06:47:55,447   adding 'klustakwik2/numerics/cylib/m_step.py'
2021-07-10T06:47:55,549   adding 'klustakwik2/numerics/cylib/m_step_cy.c'
2021-07-10T06:47:55,848   adding 'klustakwik2/numerics/cylib/m_step_cy.cpython-39-arm-linux-gnueabihf.so'
2021-07-10T06:47:55,863   adding 'klustakwik2/numerics/cylib/m_step_cy.pyx'
2021-07-10T06:47:55,864   adding 'klustakwik2/numerics/cylib/masks.py'
2021-07-10T06:47:55,946   adding 'klustakwik2/numerics/cylib/masks_cy.cpp'
2021-07-10T06:47:56,198   adding 'klustakwik2/numerics/cylib/masks_cy.cpython-39-arm-linux-gnueabihf.so'
2021-07-10T06:47:56,210   adding 'klustakwik2/numerics/cylib/masks_cy.pyx'
2021-07-10T06:47:56,211   adding 'klustakwik2/numerics/numbalib/__init__.py'
2021-07-10T06:47:56,213   adding 'klustakwik2/numerics/numbalib/m_step.py'
2021-07-10T06:47:56,215   adding 'klustakwik2/scripts/__init__.py'
2021-07-10T06:47:56,216   adding 'klustakwik2/scripts/kk2_legacy.py'
2021-07-10T06:47:56,217   adding 'klustakwik2/scripts/tools.py'
2021-07-10T06:47:56,219   adding 'klustakwik2/tests/__init__.py'
2021-07-10T06:47:56,220   adding 'klustakwik2/tests/test_compute_cluster_masks.py'
2021-07-10T06:47:56,222   adding 'klustakwik2/tests/test_compute_covariance_matrix.py'
2021-07-10T06:47:56,223   adding 'klustakwik2/tests/test_io.py'
2021-07-10T06:47:56,225   adding 'klustakwik2/tests/test_linear_algebra.py'
2021-07-10T06:47:56,226   adding 'klustakwik2/tests/test_mask_starts.py'
2021-07-10T06:47:56,228   adding 'klustakwik2/tests/test_partitioning.py'
2021-07-10T06:47:56,229   adding 'klustakwik2/tests/test_synthetic_data.py'
2021-07-10T06:47:56,232   adding 'klustakwik2-0.2.3.dist-info/LICENSE'
2021-07-10T06:47:56,234   adding 'klustakwik2-0.2.3.dist-info/METADATA'
2021-07-10T06:47:56,235   adding 'klustakwik2-0.2.3.dist-info/WHEEL'
2021-07-10T06:47:56,236   adding 'klustakwik2-0.2.3.dist-info/entry_points.txt'
2021-07-10T06:47:56,237   adding 'klustakwik2-0.2.3.dist-info/top_level.txt'
2021-07-10T06:47:56,238   adding 'klustakwik2-0.2.3.dist-info/RECORD'
2021-07-10T06:47:56,287   removing build/bdist.linux-armv7l/wheel
2021-07-10T06:47:56,460   Building wheel for klustakwik2 (setup.py): finished with status 'done'
2021-07-10T06:47:56,501   Created wheel for klustakwik2: filename=klustakwik2-0.2.3-cp39-cp39-linux_armv7l.whl size=3064177 sha256=e8e62f82890e693af6c39bcdd0de6d9aab666b79e18ebe195a213a4c70239029
2021-07-10T06:47:56,501   Stored in directory: /tmp/pip-ephem-wheel-cache-oc4bres3/wheels/f6/f4/98/b2455fbb0fe003d1b43955fbf38e69e33d36ef4a18d148ed8b
2021-07-10T06:47:56,512 Successfully built klustakwik2
2021-07-10T06:47:56,612 Removed build tracker: '/tmp/pip-req-tracker-zeb6s59j'