2021-07-10T06:45:23,393 Created temporary directory: /tmp/pip-ephem-wheel-cache-ck7yc4y8 2021-07-10T06:45:23,396 Created temporary directory: /tmp/pip-req-tracker-zo7lno_8 2021-07-10T06:45:23,397 Initialized build tracking at /tmp/pip-req-tracker-zo7lno_8 2021-07-10T06:45:23,397 Created build tracker: /tmp/pip-req-tracker-zo7lno_8 2021-07-10T06:45:23,397 Entered build tracker: /tmp/pip-req-tracker-zo7lno_8 2021-07-10T06:45:23,398 Created temporary directory: /tmp/pip-wheel-ayq1zcl0 2021-07-10T06:45:23,429 1 location(s) to search for versions of klustakwik2: 2021-07-10T06:45:23,429 * https://pypi.org/simple/klustakwik2/ 2021-07-10T06:45:23,430 Fetching project page and analyzing links: https://pypi.org/simple/klustakwik2/ 2021-07-10T06:45:23,430 Getting page https://pypi.org/simple/klustakwik2/ 2021-07-10T06:45:23,432 Found index url https://pypi.org/simple 2021-07-10T06:45:23,534 Found link https://files.pythonhosted.org/packages/1a/d6/c9974e8c616255af108f0d944a8f5ecf6d3546511e8804c3381c5577704a/klustakwik2-0.1.0b0.tar.bz2#sha256=36190f640cae42d9a4565b054ee7803b1fd7cd0d5f7e118e636c627ccd83c23d (from https://pypi.org/simple/klustakwik2/), version: 0.1.0b0 2021-07-10T06:45:23,535 Found link https://files.pythonhosted.org/packages/92/d6/a70199d4ba94ac3d18113cc615f9f95889a606638af61d501c3dc67e27ef/klustakwik2-0.1.0b0.tar.gz#sha256=e0b7638fc7dc24f7958cae9150d1587d3605aa26d38686d290ab483234d3740b (from https://pypi.org/simple/klustakwik2/), version: 0.1.0b0 2021-07-10T06:45:23,535 Found link https://files.pythonhosted.org/packages/67/ff/a61218f8963216650da5ee80c7ce41a1359e4ddfa67a99d1465cda1ed566/klustakwik2-0.1.0b0.zip#sha256=e0d0a0d49aadbcba24a5b7a1611d6c3e59649e7179838409cccfe93347b497c5 (from https://pypi.org/simple/klustakwik2/), version: 0.1.0b0 2021-07-10T06:45:23,535 Found link https://files.pythonhosted.org/packages/f7/e1/8d1f7c3e1c35cfa44178d4640d975527846bfcf41033d9c8fd4c736858b8/klustakwik2-0.1.0.tar.bz2#sha256=dd45c7a3d3540983c1f9ec2d9d733219df627be09e8878b10539db5e5c902e5c (from https://pypi.org/simple/klustakwik2/), version: 0.1.0 2021-07-10T06:45:23,535 Found link https://files.pythonhosted.org/packages/42/60/5650e90b5f10abcb632def27109eec5a07e0f7d9f4f6668b044228f4425e/klustakwik2-0.1.0.tar.gz#sha256=eb008772e88e920a775730d850234bc73877ce034d5b774bc7d79a69bee321bf (from https://pypi.org/simple/klustakwik2/), version: 0.1.0 2021-07-10T06:45:23,536 Found link https://files.pythonhosted.org/packages/10/40/65bb0d375a6bd5a3d16dd4de829748e0964b66e9e0ec41983c4eb3e7688c/klustakwik2-0.1.0.zip#sha256=ae033329ffa70206ec1922c9b4229c63efeec42410f02c537cf13888dee7ca8c (from https://pypi.org/simple/klustakwik2/), version: 0.1.0 2021-07-10T06:45:23,536 Found link https://files.pythonhosted.org/packages/1d/a3/0ae7f737ee55436826eb946e9112d926d8eb585c043c4c46018e426d2c96/klustakwik2-0.2.0.dev0.tar.bz2#sha256=a24f2eb7947d877cded15d6dfcb453452b61d4c944bee0f7c1904f399ba6be83 (from https://pypi.org/simple/klustakwik2/), version: 0.2.0.dev0 2021-07-10T06:45:23,536 Found link https://files.pythonhosted.org/packages/e8/22/58fa76b2af0b1ec5d002c825a054488a43e6bbfe57cb9770b179f92fb2c8/klustakwik2-0.2.0.dev0.tar.gz#sha256=67ad3a76da4eda184bfe5e5d90585e2bb05793515cdfa3e26d48bbd8fd1062ac (from https://pypi.org/simple/klustakwik2/), version: 0.2.0.dev0 2021-07-10T06:45:23,537 Found link https://files.pythonhosted.org/packages/17/5f/62f475d3df5478a036610fe2b731d5ae3e8e909429e0b9d2a9afa6cec3dd/klustakwik2-0.2.0.dev0.zip#sha256=844e20e921e6b9ce1b423a197488d404f294a8688113d015753c4c5a39772880 (from https://pypi.org/simple/klustakwik2/), version: 0.2.0.dev0 2021-07-10T06:45:23,537 Found link https://files.pythonhosted.org/packages/63/08/e757b5696add47bf7ab4862dbf4601049a364ef294fc32656ddc429e9595/klustakwik2-0.2.0.tar.bz2#sha256=783b87fc4d89816ea9d586171b2d9bc3026bee49a8f7cda407528747e383f746 (from https://pypi.org/simple/klustakwik2/), version: 0.2.0 2021-07-10T06:45:23,537 Found link https://files.pythonhosted.org/packages/28/eb/815bb83c5b164317f81dc5ab55c960517b84dfb601fc751cf30387080952/klustakwik2-0.2.0.tar.gz#sha256=3172b4a0756b5176d336af6e30a4c04a5dd27e39d8ecd0252e0008b0608847e0 (from https://pypi.org/simple/klustakwik2/), version: 0.2.0 2021-07-10T06:45:23,538 Found link https://files.pythonhosted.org/packages/7f/79/b506eaf810914722b74979b52d23b27ffd933c1e8ea7a5920240ffaa59eb/klustakwik2-0.2.0.zip#sha256=6e7b4227807baca9035ea87db5ef740a7247cc94cbcd0edf72fb4775db48fb79 (from https://pypi.org/simple/klustakwik2/), version: 0.2.0 2021-07-10T06:45:23,538 Found link https://files.pythonhosted.org/packages/3a/65/7f1597859f12bab5743ce39fc3bccffa895b499d56b76c80f67d686f9def/klustakwik2-0.2.1.tar.bz2#sha256=ffe4454baf70ae69476fbd3a70724605c74e29341c4559932f4e6f6ab2132a24 (from https://pypi.org/simple/klustakwik2/), version: 0.2.1 2021-07-10T06:45:23,538 Found link https://files.pythonhosted.org/packages/4e/4a/8ad93eda1789275fc2bd9793a2db6128e1aae7bdc8f1394271000e231ff4/klustakwik2-0.2.1.tar.gz#sha256=d3eb905aeca1127756d5babca411606acda70caddd65f0fdec75f5f85bdb05a0 (from https://pypi.org/simple/klustakwik2/), version: 0.2.1 2021-07-10T06:45:23,538 Found link https://files.pythonhosted.org/packages/bb/49/d2ce65bd43a1200ea59d0c9ec7dc4685961bf0c31bba895096e34d54267f/klustakwik2-0.2.1.zip#sha256=c7a3c4d078b1a7928d1449ab45b4848260bb7b020ec6d360662ef2fb04b74714 (from https://pypi.org/simple/klustakwik2/), version: 0.2.1 2021-07-10T06:45:23,539 Found link https://files.pythonhosted.org/packages/ec/a6/1fdd5fdae30662f38be1e2c1d3294694e3e31c573c5a9c142c6e3e09c5c6/klustakwik2-0.2.2.tar.bz2#sha256=54470d2f0c8b6c403d1011f0c36109125137ddb1d73a35aff8180a5cc816ceb9 (from https://pypi.org/simple/klustakwik2/), version: 0.2.2 2021-07-10T06:45:23,539 Found link https://files.pythonhosted.org/packages/68/45/6ec4583f79a6b4828390a85824c50473ebd9ffcaebb0c024e953ffb39ea2/klustakwik2-0.2.2.tar.gz#sha256=f825c55cdf2d3dab96ee1c0255ff78629c6f8a3dffd192a458a7fe93eda23957 (from https://pypi.org/simple/klustakwik2/), version: 0.2.2 2021-07-10T06:45:23,539 Found link https://files.pythonhosted.org/packages/e7/8c/a9f0f04b632db38004da1c9f20602388610e48fe142cbf9eb1e91626dd0f/klustakwik2-0.2.2.zip#sha256=f3489f7b0f7277b6017daf49cf500e700716b07ebd242f4f48b743faa43b377e (from https://pypi.org/simple/klustakwik2/), version: 0.2.2 2021-07-10T06:45:23,539 Found link https://files.pythonhosted.org/packages/da/c7/92e6d81a3b37f73384257723e81005ceb9ef51522167cf68efd04f0b9919/klustakwik2-0.2.3.tar.bz2#sha256=d1506e7607d0ed7a64fe829acd3328ddc640f402702f20f7ce3e29e37c407b26 (from https://pypi.org/simple/klustakwik2/), version: 0.2.3 2021-07-10T06:45:23,540 Found link https://files.pythonhosted.org/packages/44/02/5266a171217e49af76dfb8b98786f23fc3ffb0aa1019958c961969ae2043/klustakwik2-0.2.3.tar.gz#sha256=04d7166c3f364c2441c0312a892f152c436039f59f3a7fcefbc4cca10a160583 (from https://pypi.org/simple/klustakwik2/), version: 0.2.3 2021-07-10T06:45:23,540 Found link https://files.pythonhosted.org/packages/88/2c/b25b5efa3cc8167a28343d1cb80751761664b3c3b4cf8b398a3f616fb008/klustakwik2-0.2.3.zip#sha256=f53fb91310b0d47aaf0d1bc24690dd5dbe17c8e1c13f23cbb558d3fab127208d (from https://pypi.org/simple/klustakwik2/), version: 0.2.3 2021-07-10T06:45:23,540 Found link https://files.pythonhosted.org/packages/10/02/c786b26d177453450bd98f3608d5a7b7a08f6f3ff471114653829329b6e3/klustakwik2-0.2.4.tar.bz2#sha256=84acee4bb81418d9418791b282053e63aa2d2303e6bf1f54d53ca5a428da16b9 (from https://pypi.org/simple/klustakwik2/), version: 0.2.4 2021-07-10T06:45:23,541 Found link https://files.pythonhosted.org/packages/27/9b/39f9f939eef7492b936a1650056cb9bf3b925df4865ee51a3c615283c179/klustakwik2-0.2.4.tar.gz#sha256=fafcd4c8ec68fa4869c725c6f5ff14b3e3dde0686a875db53c699eb7d92d791a (from https://pypi.org/simple/klustakwik2/), version: 0.2.4 2021-07-10T06:45:23,541 Found link https://files.pythonhosted.org/packages/17/5e/e0cc4f3d7b0ef58e849e094f1ba6f93f1b8b9e4c2bdf6d6f3139046591aa/klustakwik2-0.2.4.zip#sha256=ba4c7412bceee00c946476f448cd6d46afcd55e2732f4797b84ab0697b253fe0 (from https://pypi.org/simple/klustakwik2/), version: 0.2.4 2021-07-10T06:45:23,558 Skipping link: none of the wheel's tags (cp35-cp35m-win_amd64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/9f/99/9374d711717c7ea4b4dbe7d069b3bf0c39ffd99dda9f728e756a22721ff7/klustakwik2-0.2.5-cp35-cp35m-win_amd64.whl#sha256=7bf7b1bce6350558803b8559495877cbd48833ef2e0098f11e134127ea347d1f (from https://pypi.org/simple/klustakwik2/) 2021-07-10T06:45:23,558 Found link https://files.pythonhosted.org/packages/5c/6d/b2d4c080aebafb6db4593fb468d71631bc4ca1e6a080f5c86d4b5a0aadfc/klustakwik2-0.2.5.tar.gz#sha256=60ea38620b2c7bd37df480f034f5b96837a907da709cf029db463f477e511a3f (from https://pypi.org/simple/klustakwik2/), version: 0.2.5 2021-07-10T06:45:23,559 Skipping link: none of the wheel's tags (cp27-cp27m-win_amd64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/cd/12/eb680c3ee6e3effba51a8539e90d1091edc260ecfbb71e5d5dd63537695f/klustakwik2-0.2.6-cp27-cp27m-win_amd64.whl#sha256=60c03fce4bb36425b3f69360d5b441048712d22d343ed98ea8cf609ec847ebb1 (from https://pypi.org/simple/klustakwik2/) 2021-07-10T06:45:23,559 Skipping link: none of the wheel's tags (cp35-cp35m-win_amd64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/ac/29/3964e52e5476c5912c52dd1c51979df0aad107efe2bbb8b9fe0bd362bdd2/klustakwik2-0.2.6-cp35-cp35m-win_amd64.whl#sha256=7e11788c1fe50078cfe563b26df630b5a1d09507fcdbedcc3d463958a09c7660 (from https://pypi.org/simple/klustakwik2/) 2021-07-10T06:45:23,560 Found link https://files.pythonhosted.org/packages/fc/65/d105474b087a7e4624e7200a753ec7b37b26d2f866e31b523ff24b366ec7/klustakwik2-0.2.6.zip#sha256=fa97e786dae2877da5a9ead6b5d3b6d63f93f67dc2113b7c13f7592df85eb062 (from https://pypi.org/simple/klustakwik2/), version: 0.2.6 2021-07-10T06:45:23,560 Skipping link: none of the wheel's tags (cp27-cp27m-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/1e/d2/85b391ecb17cfc75b2766aa3035b6b91cdd8ed3118676fa5f8cc46d8597d/klustakwik2-0.2.7-cp27-cp27m-manylinux1_x86_64.whl#sha256=2d9510048cc7b9cb5725ca8a2c44fdf5ad0db41fc96179a68314fe2b538caa24 (from https://pypi.org/simple/klustakwik2/) 2021-07-10T06:45:23,561 Skipping link: none of the wheel's tags (cp36-cp36m-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/6c/4d/840da8eb78038dec6c1b3ffdf02dfd30f02ad8c32ad64aae732c81df2f39/klustakwik2-0.2.7-cp36-cp36m-manylinux1_x86_64.whl#sha256=2c9821086513f4563446a0519181538aef08711a0a702a393ccacb7004244bcd (from https://pypi.org/simple/klustakwik2/) 2021-07-10T06:45:23,561 Skipping link: none of the wheel's tags (cp37-cp37m-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/ee/32/5c5d17c23af19bc85a7ad5a74d1a604d47de6761af88bcc2069eafb9b9c1/klustakwik2-0.2.7-cp37-cp37m-manylinux1_x86_64.whl#sha256=09c45022f11d5c6aaa1b05d43f6d32bfda1cf079fc38f0d18810d814914953f7 (from https://pypi.org/simple/klustakwik2/) 2021-07-10T06:45:23,561 Skipping link: not a file: https://pypi.org/simple/klustakwik2/ 2021-07-10T06:45:23,565 Given no hashes to check 3 links for project 'klustakwik2': discarding no candidates 2021-07-10T06:45:23,584 Collecting klustakwik2==0.2.4 2021-07-10T06:45:23,586 Created temporary directory: /tmp/pip-unpack-va4g0k86 2021-07-10T06:45:23,877 Downloading klustakwik2-0.2.4.zip (724 kB) 2021-07-10T06:45:24,258 Added klustakwik2==0.2.4 from https://files.pythonhosted.org/packages/17/5e/e0cc4f3d7b0ef58e849e094f1ba6f93f1b8b9e4c2bdf6d6f3139046591aa/klustakwik2-0.2.4.zip#sha256=ba4c7412bceee00c946476f448cd6d46afcd55e2732f4797b84ab0697b253fe0 to build tracker '/tmp/pip-req-tracker-zo7lno_8' 2021-07-10T06:45:24,259 Running setup.py (path:/tmp/pip-wheel-ayq1zcl0/klustakwik2_37b37fb4498e44b2978ec7bfec30c0d0/setup.py) egg_info for package klustakwik2 2021-07-10T06:45:24,259 Created temporary directory: /tmp/pip-pip-egg-info-6yxdxdqb 2021-07-10T06:45:24,260 Running command python setup.py egg_info 2021-07-10T06:45:26,113 /usr/local/lib/python3.9/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-ayq1zcl0/klustakwik2_37b37fb4498e44b2978ec7bfec30c0d0/klustakwik2/numerics/cylib/compute_cluster_masks_cy.pyx 2021-07-10T06:45:26,113 tree = Parsing.p_module(s, pxd, full_module_name) 2021-07-10T06:45:33,134 /usr/local/lib/python3.9/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-ayq1zcl0/klustakwik2_37b37fb4498e44b2978ec7bfec30c0d0/klustakwik2/numerics/cylib/compute_cluster_penalties_cy.pyx 2021-07-10T06:45:33,135 tree = Parsing.p_module(s, pxd, full_module_name) 2021-07-10T06:45:40,315 /usr/local/lib/python3.9/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-ayq1zcl0/klustakwik2_37b37fb4498e44b2978ec7bfec30c0d0/klustakwik2/numerics/cylib/e_step_cy.pyx 2021-07-10T06:45:40,316 tree = Parsing.p_module(s, pxd, full_module_name) 2021-07-10T06:45:50,014 /usr/local/lib/python3.9/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-ayq1zcl0/klustakwik2_37b37fb4498e44b2978ec7bfec30c0d0/klustakwik2/numerics/cylib/m_step_cy.pyx 2021-07-10T06:45:50,015 tree = Parsing.p_module(s, pxd, full_module_name) 2021-07-10T06:46:00,606 /usr/local/lib/python3.9/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-ayq1zcl0/klustakwik2_37b37fb4498e44b2978ec7bfec30c0d0/klustakwik2/numerics/cylib/masks_cy.pyx 2021-07-10T06:46:00,606 tree = Parsing.p_module(s, pxd, full_module_name) 2021-07-10T06:46:08,059 Compiling klustakwik2/numerics/cylib/compute_cluster_masks_cy.pyx because it changed. 2021-07-10T06:46:08,060 Compiling klustakwik2/numerics/cylib/compute_cluster_penalties_cy.pyx because it changed. 2021-07-10T06:46:08,060 Compiling klustakwik2/numerics/cylib/e_step_cy.pyx because it changed. 2021-07-10T06:46:08,060 Compiling klustakwik2/numerics/cylib/m_step_cy.pyx because it changed. 2021-07-10T06:46:08,060 Compiling klustakwik2/numerics/cylib/masks_cy.pyx because it changed. 2021-07-10T06:46:08,060 [1/5] Cythonizing klustakwik2/numerics/cylib/compute_cluster_masks_cy.pyx 2021-07-10T06:46:08,061 [2/5] Cythonizing klustakwik2/numerics/cylib/compute_cluster_penalties_cy.pyx 2021-07-10T06:46:08,061 [3/5] Cythonizing klustakwik2/numerics/cylib/e_step_cy.pyx 2021-07-10T06:46:08,061 [4/5] Cythonizing klustakwik2/numerics/cylib/m_step_cy.pyx 2021-07-10T06:46:08,061 [5/5] Cythonizing klustakwik2/numerics/cylib/masks_cy.pyx 2021-07-10T06:46:08,224 running egg_info 2021-07-10T06:46:08,227 creating /tmp/pip-pip-egg-info-6yxdxdqb/klustakwik2.egg-info 2021-07-10T06:46:08,228 writing /tmp/pip-pip-egg-info-6yxdxdqb/klustakwik2.egg-info/PKG-INFO 2021-07-10T06:46:08,240 writing dependency_links to /tmp/pip-pip-egg-info-6yxdxdqb/klustakwik2.egg-info/dependency_links.txt 2021-07-10T06:46:08,244 writing entry points to /tmp/pip-pip-egg-info-6yxdxdqb/klustakwik2.egg-info/entry_points.txt 2021-07-10T06:46:08,245 writing top-level names to /tmp/pip-pip-egg-info-6yxdxdqb/klustakwik2.egg-info/top_level.txt 2021-07-10T06:46:08,247 writing manifest file '/tmp/pip-pip-egg-info-6yxdxdqb/klustakwik2.egg-info/SOURCES.txt' 2021-07-10T06:46:08,402 reading manifest file '/tmp/pip-pip-egg-info-6yxdxdqb/klustakwik2.egg-info/SOURCES.txt' 2021-07-10T06:46:08,403 reading manifest template 'MANIFEST.in' 2021-07-10T06:46:08,418 warning: no files found matching '*.pyxbld' under directory 'klustakwik2/numerics/cylib' 2021-07-10T06:46:08,419 warning: no previously-included files matching '__pycache__' found under directory '*' 2021-07-10T06:46:08,420 warning: no previously-included files matching '*.py[co]' found under directory '*' 2021-07-10T06:46:08,420 adding license file 'LICENSE' 2021-07-10T06:46:08,424 writing manifest file '/tmp/pip-pip-egg-info-6yxdxdqb/klustakwik2.egg-info/SOURCES.txt' 2021-07-10T06:46:08,852 Source in /tmp/pip-wheel-ayq1zcl0/klustakwik2_37b37fb4498e44b2978ec7bfec30c0d0 has version 0.2.4, which satisfies requirement klustakwik2==0.2.4 from https://files.pythonhosted.org/packages/17/5e/e0cc4f3d7b0ef58e849e094f1ba6f93f1b8b9e4c2bdf6d6f3139046591aa/klustakwik2-0.2.4.zip#sha256=ba4c7412bceee00c946476f448cd6d46afcd55e2732f4797b84ab0697b253fe0 2021-07-10T06:46:08,853 Removed klustakwik2==0.2.4 from https://files.pythonhosted.org/packages/17/5e/e0cc4f3d7b0ef58e849e094f1ba6f93f1b8b9e4c2bdf6d6f3139046591aa/klustakwik2-0.2.4.zip#sha256=ba4c7412bceee00c946476f448cd6d46afcd55e2732f4797b84ab0697b253fe0 from build tracker '/tmp/pip-req-tracker-zo7lno_8' 2021-07-10T06:46:08,858 Created temporary directory: /tmp/pip-unpack-wkxbb0b1 2021-07-10T06:46:08,858 Building wheels for collected packages: klustakwik2 2021-07-10T06:46:08,863 Created temporary directory: /tmp/pip-wheel-au75f_4b 2021-07-10T06:46:08,864 Building wheel for klustakwik2 (setup.py): started 2021-07-10T06:46:08,864 Destination directory: /tmp/pip-wheel-au75f_4b 2021-07-10T06:46:08,865 Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-ayq1zcl0/klustakwik2_37b37fb4498e44b2978ec7bfec30c0d0/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-ayq1zcl0/klustakwik2_37b37fb4498e44b2978ec7bfec30c0d0/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-au75f_4b 2021-07-10T06:46:10,722 running bdist_wheel 2021-07-10T06:46:10,727 running build 2021-07-10T06:46:10,727 running build_py 2021-07-10T06:46:10,862 creating build 2021-07-10T06:46:10,862 creating build/lib.linux-armv7l-3.9 2021-07-10T06:46:10,863 creating build/lib.linux-armv7l-3.9/klustakwik2 2021-07-10T06:46:10,864 copying klustakwik2/logger.py -> build/lib.linux-armv7l-3.9/klustakwik2 2021-07-10T06:46:10,866 copying klustakwik2/linear_algebra.py -> build/lib.linux-armv7l-3.9/klustakwik2 2021-07-10T06:46:10,868 copying klustakwik2/data.py -> build/lib.linux-armv7l-3.9/klustakwik2 2021-07-10T06:46:10,871 copying klustakwik2/clustering.py -> build/lib.linux-armv7l-3.9/klustakwik2 2021-07-10T06:46:10,873 copying klustakwik2/precomputations.py -> build/lib.linux-armv7l-3.9/klustakwik2 2021-07-10T06:46:10,875 copying klustakwik2/monitoring.py -> build/lib.linux-armv7l-3.9/klustakwik2 2021-07-10T06:46:10,878 copying klustakwik2/mask_starts.py -> build/lib.linux-armv7l-3.9/klustakwik2 2021-07-10T06:46:10,879 copying klustakwik2/default_parameters.py -> build/lib.linux-armv7l-3.9/klustakwik2 2021-07-10T06:46:10,881 copying klustakwik2/input_output.py -> build/lib.linux-armv7l-3.9/klustakwik2 2021-07-10T06:46:10,883 copying klustakwik2/debugtools.py -> build/lib.linux-armv7l-3.9/klustakwik2 2021-07-10T06:46:10,885 copying klustakwik2/__init__.py -> build/lib.linux-armv7l-3.9/klustakwik2 2021-07-10T06:46:10,888 creating build/lib.linux-armv7l-3.9/klustakwik2/numerics 2021-07-10T06:46:10,889 copying klustakwik2/numerics/__init__.py -> build/lib.linux-armv7l-3.9/klustakwik2/numerics 2021-07-10T06:46:10,892 creating build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib 2021-07-10T06:46:10,893 copying klustakwik2/numerics/cylib/compute_cluster_penalties.py -> build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib 2021-07-10T06:46:10,895 copying klustakwik2/numerics/cylib/compute_cluster_masks.py -> build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib 2021-07-10T06:46:10,897 copying klustakwik2/numerics/cylib/e_step.py -> build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib 2021-07-10T06:46:10,900 copying klustakwik2/numerics/cylib/masks.py -> build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib 2021-07-10T06:46:10,902 copying klustakwik2/numerics/cylib/__init__.py -> build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib 2021-07-10T06:46:10,904 copying klustakwik2/numerics/cylib/m_step.py -> build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib 2021-07-10T06:46:10,907 creating build/lib.linux-armv7l-3.9/klustakwik2/numerics/numbalib 2021-07-10T06:46:10,908 copying klustakwik2/numerics/numbalib/__init__.py -> build/lib.linux-armv7l-3.9/klustakwik2/numerics/numbalib 2021-07-10T06:46:10,910 copying klustakwik2/numerics/numbalib/m_step.py -> build/lib.linux-armv7l-3.9/klustakwik2/numerics/numbalib 2021-07-10T06:46:10,913 creating build/lib.linux-armv7l-3.9/klustakwik2/tests 2021-07-10T06:46:10,914 copying klustakwik2/tests/test_partitioning.py -> build/lib.linux-armv7l-3.9/klustakwik2/tests 2021-07-10T06:46:10,916 copying klustakwik2/tests/test_compute_cluster_masks.py -> build/lib.linux-armv7l-3.9/klustakwik2/tests 2021-07-10T06:46:10,918 copying klustakwik2/tests/test_compute_covariance_matrix.py -> build/lib.linux-armv7l-3.9/klustakwik2/tests 2021-07-10T06:46:10,920 copying klustakwik2/tests/test_io.py -> build/lib.linux-armv7l-3.9/klustakwik2/tests 2021-07-10T06:46:10,922 copying klustakwik2/tests/test_mask_starts.py -> build/lib.linux-armv7l-3.9/klustakwik2/tests 2021-07-10T06:46:10,924 copying klustakwik2/tests/test_synthetic_data.py -> build/lib.linux-armv7l-3.9/klustakwik2/tests 2021-07-10T06:46:10,927 copying klustakwik2/tests/test_linear_algebra.py -> build/lib.linux-armv7l-3.9/klustakwik2/tests 2021-07-10T06:46:10,929 copying klustakwik2/tests/__init__.py -> build/lib.linux-armv7l-3.9/klustakwik2/tests 2021-07-10T06:46:10,932 creating build/lib.linux-armv7l-3.9/klustakwik2/scripts 2021-07-10T06:46:10,933 copying klustakwik2/scripts/kk2_legacy.py -> build/lib.linux-armv7l-3.9/klustakwik2/scripts 2021-07-10T06:46:10,935 copying klustakwik2/scripts/tools.py -> build/lib.linux-armv7l-3.9/klustakwik2/scripts 2021-07-10T06:46:10,937 copying klustakwik2/scripts/__init__.py -> build/lib.linux-armv7l-3.9/klustakwik2/scripts 2021-07-10T06:46:10,939 running egg_info 2021-07-10T06:46:10,953 writing klustakwik2.egg-info/PKG-INFO 2021-07-10T06:46:10,955 writing dependency_links to klustakwik2.egg-info/dependency_links.txt 2021-07-10T06:46:10,957 writing entry points to klustakwik2.egg-info/entry_points.txt 2021-07-10T06:46:10,959 writing top-level names to klustakwik2.egg-info/top_level.txt 2021-07-10T06:46:10,969 reading manifest file 'klustakwik2.egg-info/SOURCES.txt' 2021-07-10T06:46:10,972 reading manifest template 'MANIFEST.in' 2021-07-10T06:46:10,986 warning: no files found matching '*.pyxbld' under directory 'klustakwik2/numerics/cylib' 2021-07-10T06:46:10,987 warning: no previously-included files matching '__pycache__' found under directory '*' 2021-07-10T06:46:10,988 warning: no previously-included files matching '*.py[co]' found under directory '*' 2021-07-10T06:46:10,988 adding license file 'LICENSE' 2021-07-10T06:46:10,992 writing manifest file 'klustakwik2.egg-info/SOURCES.txt' 2021-07-10T06:46:10,997 copying klustakwik2/numerics/cylib/compute_cluster_masks_cy.c -> build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib 2021-07-10T06:46:11,022 copying klustakwik2/numerics/cylib/compute_cluster_masks_cy.pyx -> build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib 2021-07-10T06:46:11,024 copying klustakwik2/numerics/cylib/compute_cluster_penalties_cy.c -> build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib 2021-07-10T06:46:11,051 copying klustakwik2/numerics/cylib/compute_cluster_penalties_cy.pyx -> build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib 2021-07-10T06:46:11,054 copying klustakwik2/numerics/cylib/e_step_cy.cpp -> build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib 2021-07-10T06:46:11,092 copying klustakwik2/numerics/cylib/e_step_cy.pyx -> build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib 2021-07-10T06:46:11,095 copying klustakwik2/numerics/cylib/m_step_cy.c -> build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib 2021-07-10T06:46:11,134 copying klustakwik2/numerics/cylib/m_step_cy.pyx -> build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib 2021-07-10T06:46:11,137 copying klustakwik2/numerics/cylib/masks_cy.cpp -> build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib 2021-07-10T06:46:11,166 copying klustakwik2/numerics/cylib/masks_cy.pyx -> build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib 2021-07-10T06:46:11,173 running build_ext 2021-07-10T06:46:11,179 building 'klustakwik2.numerics.cylib.compute_cluster_masks_cy' extension 2021-07-10T06:46:11,180 creating build/temp.linux-armv7l-3.9 2021-07-10T06:46:11,180 creating build/temp.linux-armv7l-3.9/klustakwik2 2021-07-10T06:46:11,181 creating build/temp.linux-armv7l-3.9/klustakwik2/numerics 2021-07-10T06:46:11,182 creating build/temp.linux-armv7l-3.9/klustakwik2/numerics/cylib 2021-07-10T06:46:11,182 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c klustakwik2/numerics/cylib/compute_cluster_masks_cy.c -o build/temp.linux-armv7l-3.9/klustakwik2/numerics/cylib/compute_cluster_masks_cy.o 2021-07-10T06:46:11,607 In file included from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1969, 2021-07-10T06:46:11,607 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2021-07-10T06:46:11,608 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/arrayobject.h:4, 2021-07-10T06:46:11,608 from klustakwik2/numerics/cylib/compute_cluster_masks_cy.c:625: 2021-07-10T06:46:11,608 /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2021-07-10T06:46:11,608 17 | #warning "Using deprecated NumPy API, disable it with " \ 2021-07-10T06:46:11,608 | ^~~~~~~ 2021-07-10T06:46:27,229 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/klustakwik2/numerics/cylib/compute_cluster_masks_cy.o -o build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib/compute_cluster_masks_cy.cpython-39-arm-linux-gnueabihf.so 2021-07-10T06:46:27,407 building 'klustakwik2.numerics.cylib.compute_cluster_penalties_cy' extension 2021-07-10T06:46:27,408 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c klustakwik2/numerics/cylib/compute_cluster_penalties_cy.c -o build/temp.linux-armv7l-3.9/klustakwik2/numerics/cylib/compute_cluster_penalties_cy.o 2021-07-10T06:46:27,778 In file included from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1969, 2021-07-10T06:46:27,778 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2021-07-10T06:46:27,778 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/arrayobject.h:4, 2021-07-10T06:46:27,778 from klustakwik2/numerics/cylib/compute_cluster_penalties_cy.c:625: 2021-07-10T06:46:27,778 /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2021-07-10T06:46:27,779 17 | #warning "Using deprecated NumPy API, disable it with " \ 2021-07-10T06:46:27,779 | ^~~~~~~ 2021-07-10T06:46:43,668 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/klustakwik2/numerics/cylib/compute_cluster_penalties_cy.o -o build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib/compute_cluster_penalties_cy.cpython-39-arm-linux-gnueabihf.so 2021-07-10T06:46:43,843 building 'klustakwik2.numerics.cylib.e_step_cy' extension 2021-07-10T06:46:43,843 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c klustakwik2/numerics/cylib/e_step_cy.cpp -o build/temp.linux-armv7l-3.9/klustakwik2/numerics/cylib/e_step_cy.o -fopenmp 2021-07-10T06:46:44,134 In file included from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1969, 2021-07-10T06:46:44,134 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2021-07-10T06:46:44,135 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/arrayobject.h:4, 2021-07-10T06:46:44,135 from klustakwik2/numerics/cylib/e_step_cy.cpp:640: 2021-07-10T06:46:44,135 /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2021-07-10T06:46:44,135 17 | #warning "Using deprecated NumPy API, disable it with " \ 2021-07-10T06:46:44,135 | ^~~~~~~ 2021-07-10T06:46:46,193 klustakwik2/numerics/cylib/e_step_cy.cpp: In function ‘int __Pyx_InitGlobals()’: 2021-07-10T06:46:46,194 klustakwik2/numerics/cylib/e_step_cy.cpp:29437:20: warning: ‘void PyEval_InitThreads()’ is deprecated [-Wdeprecated-declarations] 2021-07-10T06:46:46,194 29437 | PyEval_InitThreads(); 2021-07-10T06:46:46,194 | ^ 2021-07-10T06:46:46,194 In file included from /usr/include/python3.9/Python.h:145, 2021-07-10T06:46:46,194 from klustakwik2/numerics/cylib/e_step_cy.cpp:20: 2021-07-10T06:46:46,194 /usr/include/python3.9/ceval.h:130:37: note: declared here 2021-07-10T06:46:46,195 130 | Py_DEPRECATED(3.9) PyAPI_FUNC(void) PyEval_InitThreads(void); 2021-07-10T06:46:46,195 | ^~~~~~~~~~~~~~~~~~ 2021-07-10T06:47:15,089 arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/klustakwik2/numerics/cylib/e_step_cy.o -o build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib/e_step_cy.cpython-39-arm-linux-gnueabihf.so -fopenmp 2021-07-10T06:47:15,346 building 'klustakwik2.numerics.cylib.m_step_cy' extension 2021-07-10T06:47:15,346 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c klustakwik2/numerics/cylib/m_step_cy.c -o build/temp.linux-armv7l-3.9/klustakwik2/numerics/cylib/m_step_cy.o 2021-07-10T06:47:15,731 In file included from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1969, 2021-07-10T06:47:15,731 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2021-07-10T06:47:15,731 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/arrayobject.h:4, 2021-07-10T06:47:15,731 from klustakwik2/numerics/cylib/m_step_cy.c:625: 2021-07-10T06:47:15,731 /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2021-07-10T06:47:15,732 17 | #warning "Using deprecated NumPy API, disable it with " \ 2021-07-10T06:47:15,732 | ^~~~~~~ 2021-07-10T06:47:43,140 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/klustakwik2/numerics/cylib/m_step_cy.o -o build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib/m_step_cy.cpython-39-arm-linux-gnueabihf.so 2021-07-10T06:47:43,355 building 'klustakwik2.numerics.cylib.masks_cy' extension 2021-07-10T06:47:43,356 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c klustakwik2/numerics/cylib/masks_cy.cpp -o build/temp.linux-armv7l-3.9/klustakwik2/numerics/cylib/masks_cy.o 2021-07-10T06:47:43,638 In file included from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1969, 2021-07-10T06:47:43,639 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2021-07-10T06:47:43,639 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/arrayobject.h:4, 2021-07-10T06:47:43,639 from klustakwik2/numerics/cylib/masks_cy.cpp:640: 2021-07-10T06:47:43,639 /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2021-07-10T06:47:43,639 17 | #warning "Using deprecated NumPy API, disable it with " \ 2021-07-10T06:47:43,639 | ^~~~~~~ 2021-07-10T06:47:44,957 klustakwik2/numerics/cylib/masks_cy.cpp: In function ‘PyObject* __pyx_fuse_0__pyx_f_11klustakwik2_8numerics_5cylib_8masks_cy_do_mask_starts(__Pyx_memviewslice, __Pyx_memviewslice, __Pyx_memviewslice, __Pyx_memviewslice, __Pyx_memviewslice, short int, short int, int)’: 2021-07-10T06:47:44,957 klustakwik2/numerics/cylib/masks_cy.cpp:4649:39: warning: comparison of integer expressions of different signedness: ‘short int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2021-07-10T06:47:44,957 4649 | for (__pyx_t_9 = 0; __pyx_t_9 < __pyx_t_11; __pyx_t_9+=1) { 2021-07-10T06:47:44,958 | ~~~~~~~~~~^~~~~~~~~~~~ 2021-07-10T06:47:44,996 klustakwik2/numerics/cylib/masks_cy.cpp: In function ‘PyObject* __pyx_fuse_1__pyx_f_11klustakwik2_8numerics_5cylib_8masks_cy_do_mask_starts(__Pyx_memviewslice, __Pyx_memviewslice, __Pyx_memviewslice, __Pyx_memviewslice, __Pyx_memviewslice, int, int, int)’: 2021-07-10T06:47:44,997 klustakwik2/numerics/cylib/masks_cy.cpp:5310:39: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2021-07-10T06:47:44,997 5310 | for (__pyx_t_9 = 0; __pyx_t_9 < __pyx_t_11; __pyx_t_9+=1) { 2021-07-10T06:47:44,997 | ~~~~~~~~~~^~~~~~~~~~~~ 2021-07-10T06:47:45,034 klustakwik2/numerics/cylib/masks_cy.cpp: In function ‘PyObject* __pyx_fuse_2__pyx_f_11klustakwik2_8numerics_5cylib_8masks_cy_do_mask_starts(__Pyx_memviewslice, __Pyx_memviewslice, __Pyx_memviewslice, __Pyx_memviewslice, __Pyx_memviewslice, long int, long int, int)’: 2021-07-10T06:47:45,034 klustakwik2/numerics/cylib/masks_cy.cpp:5971:39: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2021-07-10T06:47:45,034 5971 | for (__pyx_t_9 = 0; __pyx_t_9 < __pyx_t_11; __pyx_t_9+=1) { 2021-07-10T06:47:45,035 | ~~~~~~~~~~^~~~~~~~~~~~ 2021-07-10T06:48:02,411 arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/klustakwik2/numerics/cylib/masks_cy.o -o build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib/masks_cy.cpython-39-arm-linux-gnueabihf.so 2021-07-10T06:48:02,756 installing to build/bdist.linux-armv7l/wheel 2021-07-10T06:48:02,757 running install 2021-07-10T06:48:02,758 running install_lib 2021-07-10T06:48:02,762 creating build/bdist.linux-armv7l 2021-07-10T06:48:02,762 creating build/bdist.linux-armv7l/wheel 2021-07-10T06:48:02,763 creating build/bdist.linux-armv7l/wheel/klustakwik2 2021-07-10T06:48:02,764 copying build/lib.linux-armv7l-3.9/klustakwik2/logger.py -> build/bdist.linux-armv7l/wheel/klustakwik2 2021-07-10T06:48:02,766 copying build/lib.linux-armv7l-3.9/klustakwik2/linear_algebra.py -> build/bdist.linux-armv7l/wheel/klustakwik2 2021-07-10T06:48:02,768 copying build/lib.linux-armv7l-3.9/klustakwik2/data.py -> build/bdist.linux-armv7l/wheel/klustakwik2 2021-07-10T06:48:02,770 copying build/lib.linux-armv7l-3.9/klustakwik2/clustering.py -> build/bdist.linux-armv7l/wheel/klustakwik2 2021-07-10T06:48:02,773 copying build/lib.linux-armv7l-3.9/klustakwik2/precomputations.py -> build/bdist.linux-armv7l/wheel/klustakwik2 2021-07-10T06:48:02,775 copying build/lib.linux-armv7l-3.9/klustakwik2/monitoring.py -> build/bdist.linux-armv7l/wheel/klustakwik2 2021-07-10T06:48:02,777 copying build/lib.linux-armv7l-3.9/klustakwik2/mask_starts.py -> build/bdist.linux-armv7l/wheel/klustakwik2 2021-07-10T06:48:02,780 creating build/bdist.linux-armv7l/wheel/klustakwik2/numerics 2021-07-10T06:48:02,781 creating build/bdist.linux-armv7l/wheel/klustakwik2/numerics/cylib 2021-07-10T06:48:02,782 copying build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib/compute_cluster_masks_cy.pyx -> build/bdist.linux-armv7l/wheel/klustakwik2/numerics/cylib 2021-07-10T06:48:02,784 copying build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib/compute_cluster_penalties_cy.c -> build/bdist.linux-armv7l/wheel/klustakwik2/numerics/cylib 2021-07-10T06:48:02,813 copying build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib/m_step_cy.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/klustakwik2/numerics/cylib 2021-07-10T06:48:02,851 copying build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib/compute_cluster_penalties_cy.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/klustakwik2/numerics/cylib 2021-07-10T06:48:02,876 copying build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib/e_step_cy.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/klustakwik2/numerics/cylib 2021-07-10T06:48:02,913 copying build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib/compute_cluster_masks_cy.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/klustakwik2/numerics/cylib 2021-07-10T06:48:02,945 copying build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib/compute_cluster_penalties.py -> build/bdist.linux-armv7l/wheel/klustakwik2/numerics/cylib 2021-07-10T06:48:02,947 copying build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib/compute_cluster_penalties_cy.pyx -> build/bdist.linux-armv7l/wheel/klustakwik2/numerics/cylib 2021-07-10T06:48:02,949 copying build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib/compute_cluster_masks.py -> build/bdist.linux-armv7l/wheel/klustakwik2/numerics/cylib 2021-07-10T06:48:02,951 copying build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib/e_step_cy.pyx -> build/bdist.linux-armv7l/wheel/klustakwik2/numerics/cylib 2021-07-10T06:48:02,953 copying build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib/e_step.py -> build/bdist.linux-armv7l/wheel/klustakwik2/numerics/cylib 2021-07-10T06:48:02,955 copying build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib/masks_cy.cpp -> build/bdist.linux-armv7l/wheel/klustakwik2/numerics/cylib 2021-07-10T06:48:02,986 copying build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib/m_step_cy.pyx -> build/bdist.linux-armv7l/wheel/klustakwik2/numerics/cylib 2021-07-10T06:48:02,988 copying build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib/masks_cy.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/klustakwik2/numerics/cylib 2021-07-10T06:48:03,017 copying build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib/m_step_cy.c -> build/bdist.linux-armv7l/wheel/klustakwik2/numerics/cylib 2021-07-10T06:48:03,055 copying build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib/e_step_cy.cpp -> build/bdist.linux-armv7l/wheel/klustakwik2/numerics/cylib 2021-07-10T06:48:03,092 copying build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib/compute_cluster_masks_cy.c -> build/bdist.linux-armv7l/wheel/klustakwik2/numerics/cylib 2021-07-10T06:48:03,124 copying build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib/masks.py -> build/bdist.linux-armv7l/wheel/klustakwik2/numerics/cylib 2021-07-10T06:48:03,126 copying build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib/masks_cy.pyx -> build/bdist.linux-armv7l/wheel/klustakwik2/numerics/cylib 2021-07-10T06:48:03,128 copying build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib/__init__.py -> build/bdist.linux-armv7l/wheel/klustakwik2/numerics/cylib 2021-07-10T06:48:03,129 copying build/lib.linux-armv7l-3.9/klustakwik2/numerics/cylib/m_step.py -> build/bdist.linux-armv7l/wheel/klustakwik2/numerics/cylib 2021-07-10T06:48:03,132 creating build/bdist.linux-armv7l/wheel/klustakwik2/numerics/numbalib 2021-07-10T06:48:03,133 copying build/lib.linux-armv7l-3.9/klustakwik2/numerics/numbalib/__init__.py -> build/bdist.linux-armv7l/wheel/klustakwik2/numerics/numbalib 2021-07-10T06:48:03,134 copying build/lib.linux-armv7l-3.9/klustakwik2/numerics/numbalib/m_step.py -> build/bdist.linux-armv7l/wheel/klustakwik2/numerics/numbalib 2021-07-10T06:48:03,137 copying build/lib.linux-armv7l-3.9/klustakwik2/numerics/__init__.py -> build/bdist.linux-armv7l/wheel/klustakwik2/numerics 2021-07-10T06:48:03,138 copying build/lib.linux-armv7l-3.9/klustakwik2/default_parameters.py -> build/bdist.linux-armv7l/wheel/klustakwik2 2021-07-10T06:48:03,141 creating build/bdist.linux-armv7l/wheel/klustakwik2/tests 2021-07-10T06:48:03,142 copying build/lib.linux-armv7l-3.9/klustakwik2/tests/test_partitioning.py -> build/bdist.linux-armv7l/wheel/klustakwik2/tests 2021-07-10T06:48:03,144 copying build/lib.linux-armv7l-3.9/klustakwik2/tests/test_compute_cluster_masks.py -> build/bdist.linux-armv7l/wheel/klustakwik2/tests 2021-07-10T06:48:03,146 copying build/lib.linux-armv7l-3.9/klustakwik2/tests/test_compute_covariance_matrix.py -> build/bdist.linux-armv7l/wheel/klustakwik2/tests 2021-07-10T06:48:03,148 copying build/lib.linux-armv7l-3.9/klustakwik2/tests/test_io.py -> build/bdist.linux-armv7l/wheel/klustakwik2/tests 2021-07-10T06:48:03,151 copying build/lib.linux-armv7l-3.9/klustakwik2/tests/test_mask_starts.py -> build/bdist.linux-armv7l/wheel/klustakwik2/tests 2021-07-10T06:48:03,153 copying build/lib.linux-armv7l-3.9/klustakwik2/tests/test_synthetic_data.py -> build/bdist.linux-armv7l/wheel/klustakwik2/tests 2021-07-10T06:48:03,155 copying build/lib.linux-armv7l-3.9/klustakwik2/tests/test_linear_algebra.py -> build/bdist.linux-armv7l/wheel/klustakwik2/tests 2021-07-10T06:48:03,158 copying build/lib.linux-armv7l-3.9/klustakwik2/tests/__init__.py -> build/bdist.linux-armv7l/wheel/klustakwik2/tests 2021-07-10T06:48:03,160 copying build/lib.linux-armv7l-3.9/klustakwik2/input_output.py -> build/bdist.linux-armv7l/wheel/klustakwik2 2021-07-10T06:48:03,163 creating build/bdist.linux-armv7l/wheel/klustakwik2/scripts 2021-07-10T06:48:03,164 copying build/lib.linux-armv7l-3.9/klustakwik2/scripts/kk2_legacy.py -> build/bdist.linux-armv7l/wheel/klustakwik2/scripts 2021-07-10T06:48:03,166 copying build/lib.linux-armv7l-3.9/klustakwik2/scripts/tools.py -> build/bdist.linux-armv7l/wheel/klustakwik2/scripts 2021-07-10T06:48:03,168 copying build/lib.linux-armv7l-3.9/klustakwik2/scripts/__init__.py -> build/bdist.linux-armv7l/wheel/klustakwik2/scripts 2021-07-10T06:48:03,170 copying build/lib.linux-armv7l-3.9/klustakwik2/debugtools.py -> build/bdist.linux-armv7l/wheel/klustakwik2 2021-07-10T06:48:03,173 copying build/lib.linux-armv7l-3.9/klustakwik2/__init__.py -> build/bdist.linux-armv7l/wheel/klustakwik2 2021-07-10T06:48:03,175 running install_egg_info 2021-07-10T06:48:03,186 Copying klustakwik2.egg-info to build/bdist.linux-armv7l/wheel/klustakwik2-0.2.4-py3.9.egg-info 2021-07-10T06:48:03,202 running install_scripts 2021-07-10T06:48:03,246 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2021-07-10T06:48:03,250 creating build/bdist.linux-armv7l/wheel/klustakwik2-0.2.4.dist-info/WHEEL 2021-07-10T06:48:03,253 creating '/tmp/pip-wheel-au75f_4b/klustakwik2-0.2.4-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2021-07-10T06:48:03,256 adding 'klustakwik2/__init__.py' 2021-07-10T06:48:03,261 adding 'klustakwik2/clustering.py' 2021-07-10T06:48:03,264 adding 'klustakwik2/data.py' 2021-07-10T06:48:03,265 adding 'klustakwik2/debugtools.py' 2021-07-10T06:48:03,266 adding 'klustakwik2/default_parameters.py' 2021-07-10T06:48:03,268 adding 'klustakwik2/input_output.py' 2021-07-10T06:48:03,270 adding 'klustakwik2/linear_algebra.py' 2021-07-10T06:48:03,271 adding 'klustakwik2/logger.py' 2021-07-10T06:48:03,272 adding 'klustakwik2/mask_starts.py' 2021-07-10T06:48:03,274 adding 'klustakwik2/monitoring.py' 2021-07-10T06:48:03,275 adding 'klustakwik2/precomputations.py' 2021-07-10T06:48:03,277 adding 'klustakwik2/numerics/__init__.py' 2021-07-10T06:48:03,279 adding 'klustakwik2/numerics/cylib/__init__.py' 2021-07-10T06:48:03,280 adding 'klustakwik2/numerics/cylib/compute_cluster_masks.py' 2021-07-10T06:48:03,364 adding 'klustakwik2/numerics/cylib/compute_cluster_masks_cy.c' 2021-07-10T06:48:03,575 adding 'klustakwik2/numerics/cylib/compute_cluster_masks_cy.cpython-39-arm-linux-gnueabihf.so' 2021-07-10T06:48:03,584 adding 'klustakwik2/numerics/cylib/compute_cluster_masks_cy.pyx' 2021-07-10T06:48:03,585 adding 'klustakwik2/numerics/cylib/compute_cluster_penalties.py' 2021-07-10T06:48:03,665 adding 'klustakwik2/numerics/cylib/compute_cluster_penalties_cy.c' 2021-07-10T06:48:03,880 adding 'klustakwik2/numerics/cylib/compute_cluster_penalties_cy.cpython-39-arm-linux-gnueabihf.so' 2021-07-10T06:48:03,890 adding 'klustakwik2/numerics/cylib/compute_cluster_penalties_cy.pyx' 2021-07-10T06:48:03,891 adding 'klustakwik2/numerics/cylib/e_step.py' 2021-07-10T06:48:04,001 adding 'klustakwik2/numerics/cylib/e_step_cy.cpp' 2021-07-10T06:48:04,305 adding 'klustakwik2/numerics/cylib/e_step_cy.cpython-39-arm-linux-gnueabihf.so' 2021-07-10T06:48:04,320 adding 'klustakwik2/numerics/cylib/e_step_cy.pyx' 2021-07-10T06:48:04,321 adding 'klustakwik2/numerics/cylib/m_step.py' 2021-07-10T06:48:04,422 adding 'klustakwik2/numerics/cylib/m_step_cy.c' 2021-07-10T06:48:04,720 adding 'klustakwik2/numerics/cylib/m_step_cy.cpython-39-arm-linux-gnueabihf.so' 2021-07-10T06:48:04,735 adding 'klustakwik2/numerics/cylib/m_step_cy.pyx' 2021-07-10T06:48:04,736 adding 'klustakwik2/numerics/cylib/masks.py' 2021-07-10T06:48:04,817 adding 'klustakwik2/numerics/cylib/masks_cy.cpp' 2021-07-10T06:48:05,070 adding 'klustakwik2/numerics/cylib/masks_cy.cpython-39-arm-linux-gnueabihf.so' 2021-07-10T06:48:05,081 adding 'klustakwik2/numerics/cylib/masks_cy.pyx' 2021-07-10T06:48:05,082 adding 'klustakwik2/numerics/numbalib/__init__.py' 2021-07-10T06:48:05,084 adding 'klustakwik2/numerics/numbalib/m_step.py' 2021-07-10T06:48:05,085 adding 'klustakwik2/scripts/__init__.py' 2021-07-10T06:48:05,087 adding 'klustakwik2/scripts/kk2_legacy.py' 2021-07-10T06:48:05,088 adding 'klustakwik2/scripts/tools.py' 2021-07-10T06:48:05,090 adding 'klustakwik2/tests/__init__.py' 2021-07-10T06:48:05,091 adding 'klustakwik2/tests/test_compute_cluster_masks.py' 2021-07-10T06:48:05,092 adding 'klustakwik2/tests/test_compute_covariance_matrix.py' 2021-07-10T06:48:05,094 adding 'klustakwik2/tests/test_io.py' 2021-07-10T06:48:05,095 adding 'klustakwik2/tests/test_linear_algebra.py' 2021-07-10T06:48:05,097 adding 'klustakwik2/tests/test_mask_starts.py' 2021-07-10T06:48:05,098 adding 'klustakwik2/tests/test_partitioning.py' 2021-07-10T06:48:05,099 adding 'klustakwik2/tests/test_synthetic_data.py' 2021-07-10T06:48:05,102 adding 'klustakwik2-0.2.4.dist-info/LICENSE' 2021-07-10T06:48:05,103 adding 'klustakwik2-0.2.4.dist-info/METADATA' 2021-07-10T06:48:05,104 adding 'klustakwik2-0.2.4.dist-info/WHEEL' 2021-07-10T06:48:05,105 adding 'klustakwik2-0.2.4.dist-info/entry_points.txt' 2021-07-10T06:48:05,106 adding 'klustakwik2-0.2.4.dist-info/top_level.txt' 2021-07-10T06:48:05,107 adding 'klustakwik2-0.2.4.dist-info/RECORD' 2021-07-10T06:48:05,151 removing build/bdist.linux-armv7l/wheel 2021-07-10T06:48:05,318 Building wheel for klustakwik2 (setup.py): finished with status 'done' 2021-07-10T06:48:05,359 Created wheel for klustakwik2: filename=klustakwik2-0.2.4-cp39-cp39-linux_armv7l.whl size=3064228 sha256=b674c9f9b30fa298440fef133e414dfa371d7d4c219d140f994b36ba5a32c10e 2021-07-10T06:48:05,359 Stored in directory: /tmp/pip-ephem-wheel-cache-ck7yc4y8/wheels/cd/77/1e/b5e6a223d8de87beb173d63d2a20e68d7b8fb7a8b986339eb9 2021-07-10T06:48:05,369 Successfully built klustakwik2 2021-07-10T06:48:05,463 Removed build tracker: '/tmp/pip-req-tracker-zo7lno_8'