2021-07-10T11:15:55,516 Created temporary directory: /tmp/pip-ephem-wheel-cache-tvg68b3l 2021-07-10T11:15:55,519 Created temporary directory: /tmp/pip-req-tracker-r1bz50zz 2021-07-10T11:15:55,520 Initialized build tracking at /tmp/pip-req-tracker-r1bz50zz 2021-07-10T11:15:55,520 Created build tracker: /tmp/pip-req-tracker-r1bz50zz 2021-07-10T11:15:55,520 Entered build tracker: /tmp/pip-req-tracker-r1bz50zz 2021-07-10T11:15:55,521 Created temporary directory: /tmp/pip-wheel-kl0_db8k 2021-07-10T11:15:55,554 1 location(s) to search for versions of pybigwig: 2021-07-10T11:15:55,554 * https://pypi.org/simple/pybigwig/ 2021-07-10T11:15:55,555 Fetching project page and analyzing links: https://pypi.org/simple/pybigwig/ 2021-07-10T11:15:55,555 Getting page https://pypi.org/simple/pybigwig/ 2021-07-10T11:15:55,557 Found index url https://pypi.org/simple 2021-07-10T11:15:55,753 Found link https://files.pythonhosted.org/packages/f5/9f/322e726df7cd381467361b2d0aa364a3d9cb7253bba91a9ea09f42515c7c/pyBigWig-0.1.9.tar.gz#sha256=c3cdc622f148209f33e6c1f74b7c265ede53525ee751f1a7c26915ee3f020124 (from https://pypi.org/simple/pybigwig/), version: 0.1.9 2021-07-10T11:15:55,753 Found link https://files.pythonhosted.org/packages/cb/73/673370f856225bc40566d96c68c250e4fdd01fb13624c0d7f8d6b0edf392/pyBigWig-0.1.10.tar.gz#sha256=864ab4c15117cc7216813408bd976cd35dc63df9859309a283035ee4c72830e3 (from https://pypi.org/simple/pybigwig/), version: 0.1.10 2021-07-10T11:15:55,754 Found link https://files.pythonhosted.org/packages/ec/2e/4acacf4077b7f9900a1b213c197e57c2c8ee44345ed95815aa73b6545a17/pyBigWig-0.1.11.tar.gz#sha256=6e243147558fdb7ac8f674599d0f83645153f526e415b6fe0896d8e734518667 (from https://pypi.org/simple/pybigwig/), version: 0.1.11 2021-07-10T11:15:55,754 Found link https://files.pythonhosted.org/packages/c9/1a/656e854a640b19e926becbb977a9eae2b7603d42c784a299f43f53444d75/pyBigWig-0.2.0.tar.gz#sha256=80f2de84cbc19829f57e2dfd907598e7775352c11b45a5cb9e38e4cf3895d064 (from https://pypi.org/simple/pybigwig/), version: 0.2.0 2021-07-10T11:15:55,754 Found link https://files.pythonhosted.org/packages/c7/93/b083cab6dcf79e5fc667eba2081ec2191cb0dd7801508eb377113479ce64/pyBigWig-0.2.1.tar.gz#sha256=80b434da547c87c54e4d8221bc2a26d490138dcb1148d50ec92129ca38b9ebcd (from https://pypi.org/simple/pybigwig/), version: 0.2.1 2021-07-10T11:15:55,755 Found link https://files.pythonhosted.org/packages/66/96/3e1db5ae2133d09ea5635b1b42757f7a0f9c648b1548eb858748a4b4ed62/pyBigWig-0.2.1b.tar.gz#sha256=8927da11cc0f46499e828070ce7812a23b755cb133d6911e262752a440c61563 (from https://pypi.org/simple/pybigwig/), version: 0.2.1b 2021-07-10T11:15:55,755 Found link https://files.pythonhosted.org/packages/26/f6/19b9a15bc707894cf3f4fb9486701f5db52c0e3d3008475525686426b3ff/pyBigWig-0.2.3.tar.gz#sha256=e459940634b54892784bf1e3a55627c3d0c503d74922d4049bd5af2021c95956 (from https://pypi.org/simple/pybigwig/), version: 0.2.3 2021-07-10T11:15:55,755 Found link https://files.pythonhosted.org/packages/cb/98/c174403162ae8e173bf8082cbe6dafaa633008a348a7728279acf3f52202/pyBigWig-0.2.4.tar.gz#sha256=e6515d3a2a127d1731fea83ebd81ba215ab9543f956ed0209e883c5d18dab73d (from https://pypi.org/simple/pybigwig/), version: 0.2.4 2021-07-10T11:15:55,755 Found link https://files.pythonhosted.org/packages/d9/d5/c24a149ac3c64b79e22d91b7ac106653fdd46e084ee531e04c78974e12c0/pyBigWig-0.2.5.tar.gz#sha256=ed3c08eea6937b08ee22f2bc2a31635f1e32c3a64270d28bf056033f5e6f377b (from https://pypi.org/simple/pybigwig/), version: 0.2.5 2021-07-10T11:15:55,756 Found link https://files.pythonhosted.org/packages/0f/32/73ee29e671251a02a056b872c74acac1608a82ded6027c4bdaadc69c7ef3/pyBigWig-0.2.6.tar.gz#sha256=91ddb0aa18136bee9abfc409324b779c1a3397c6dda5066ab7cf32c716455b82 (from https://pypi.org/simple/pybigwig/), version: 0.2.6 2021-07-10T11:15:55,756 Found link https://files.pythonhosted.org/packages/dd/ea/d501603c1b148f00a3cdd77649a40093ea140aa89b30a6a56a4542452540/pyBigWig-0.2.7.tar.gz#sha256=42df36aaf3e1b335ea939cfcee7f1edfccd4d8f6059b12d95ff19f1e22a8e793 (from https://pypi.org/simple/pybigwig/), version: 0.2.7 2021-07-10T11:15:55,756 Found link https://files.pythonhosted.org/packages/8a/9e/795e371a5516086ae81d6f543cdd6491fb81988b327d75082bead0edb1d2/pyBigWig-0.2.8.tar.gz#sha256=f9262d406ee34aba46fc034bd7cfc45b0165de9c4f3c9959c289d9b7fdbcbea7 (from https://pypi.org/simple/pybigwig/), version: 0.2.8 2021-07-10T11:15:55,756 Found link https://files.pythonhosted.org/packages/59/23/5d77c02ea726c66963f5a38a7aa2a0620285f9f5ada441d09174153603e1/pyBigWig-0.3.0.tar.gz#sha256=03cebed08bc6d8b373e16f2dbe1c853c8d347f3d7ea284faedcd4c15ccf2bc36 (from https://pypi.org/simple/pybigwig/), version: 0.3.0 2021-07-10T11:15:55,757 Found link https://files.pythonhosted.org/packages/c2/fc/a25347e31f546331ad5ceff73997d4976844fff5448f4d7007eaa49a29b2/pyBigWig-0.3.1.tar.gz#sha256=1103dc64eb20bf02e72f2909471a38070bf000eab7206e0c2dd3e4f62b683254 (from https://pypi.org/simple/pybigwig/), version: 0.3.1 2021-07-10T11:15:55,757 Found link https://files.pythonhosted.org/packages/b6/14/2f258517f5d51a0298d536140d41278f912c84f45eb1b38a1c3b7c1703b7/pyBigWig-0.3.2.tar.gz#sha256=bf8f93547dc8e7155329b4cc7672fee74415368f0f833865d4342dc3fd6639ef (from https://pypi.org/simple/pybigwig/), version: 0.3.2 2021-07-10T11:15:55,757 Found link https://files.pythonhosted.org/packages/a0/a2/8a763d99a0e5dfce08193d7ec4a42c6253e585b13b0a7813f92ae489f395/pyBigWig-0.3.3.tar.gz#sha256=ab114abf948d8dcfa6741fab15d610a38db34d0534f446ce84c05d0795e87afc (from https://pypi.org/simple/pybigwig/), version: 0.3.3 2021-07-10T11:15:55,758 Found link https://files.pythonhosted.org/packages/4d/7c/911e92392cf2d70d1a0da8fbb95be1e203f3cf9f858e030e98d4882c9ec7/pyBigWig-0.3.4.tar.gz#sha256=8c97a19218023190041c0e426f1544f7a4944a7bb4568faca1d85f1975af9ee2 (from https://pypi.org/simple/pybigwig/), version: 0.3.4 2021-07-10T11:15:55,758 Found link https://files.pythonhosted.org/packages/02/15/fe19d36626ea7965dd1800db4d7ed20c91940fb8604683a85014495b5bf1/pyBigWig-0.3.5.tar.gz#sha256=12f06b03ff86dc37bf13b1e06f8dc742b005415b0918bd2d4e85d5c35dd8f8c7 (from https://pypi.org/simple/pybigwig/), version: 0.3.5 2021-07-10T11:15:55,758 Found link https://files.pythonhosted.org/packages/4e/ea/810a2c9741789538e5c77d6a10fcc367f08e7817d8bd7fa1c59e94fdc88d/pyBigWig-0.3.6.tar.gz#sha256=b56302b356c51987b734b26461f2d7e866fb07308d25be30a7b3c7fb4de5c272 (from https://pypi.org/simple/pybigwig/), version: 0.3.6 2021-07-10T11:15:55,758 Found link https://files.pythonhosted.org/packages/0e/d9/ce1a95e10627f25a1e511eae4ef074eba2af5d1e0c36537fa3d957c68535/pyBigWig-0.3.7.tar.gz#sha256=4f13fba8ec835fc868686e6aad420c8b6f0d3728c0fef19411e4dba8f084e268 (from https://pypi.org/simple/pybigwig/), version: 0.3.7 2021-07-10T11:15:55,759 Found link https://files.pythonhosted.org/packages/fd/9b/556012ec55fd075d2b7c38bb889c2d477fa6f491ae806f657d8ec47caf3d/pyBigWig-0.3.8.tar.gz#sha256=7b31228ddb22d3afe72e5f50283d8e59bcaa878adbf77a3337878f19ec48fa41 (from https://pypi.org/simple/pybigwig/), version: 0.3.8 2021-07-10T11:15:55,759 Found link https://files.pythonhosted.org/packages/48/f5/972aad9b52ed8b4d3e651d5b766a9aa29c62e7052919970e1b61b40fa9d7/pyBigWig-0.3.9.tar.gz#sha256=34306213414a8d8974c4ffaac153b3d0a67ce0183514a93aede6c3d33b6f7947 (from https://pypi.org/simple/pybigwig/), version: 0.3.9 2021-07-10T11:15:55,759 Found link https://files.pythonhosted.org/packages/9b/a2/322da414cdff7d3da7084388d2e65c6136722b744290619689d70e625058/pyBigWig-0.3.10.tar.gz#sha256=a409d67a744e099260c0d17c7b98a4250f41de0daa9ef32bf7512b0cd35f0039 (from https://pypi.org/simple/pybigwig/), version: 0.3.10 2021-07-10T11:15:55,760 Found link https://files.pythonhosted.org/packages/7b/b7/e135efa69cd146d22920c196e4575d2ff5a0b19c8f3a29634f5b4c639764/pyBigWig-0.3.11.tar.gz#sha256=408ebb40f01c72c77adde4d785a18dabc9abbe9020024e4296b8f6a51a662ae7 (from https://pypi.org/simple/pybigwig/), version: 0.3.11 2021-07-10T11:15:55,760 Found link https://files.pythonhosted.org/packages/d5/0d/8e2a1edb9524790c6a4d0b70bc800a8e4afee1bc7bdd048c54b8d9cf1c32/pyBigWig-0.3.12.tar.gz#sha256=e01991790ece496bf6d3f00778dcfb136dd9ca0fd28acc1b3fb43051ad9b8403 (from https://pypi.org/simple/pybigwig/), version: 0.3.12 2021-07-10T11:15:55,760 Found link https://files.pythonhosted.org/packages/5c/9c/2e01d04b6fd31c1e09537c8f51410123c087da4974bdb0fcdb7ec25dab62/pyBigWig-0.3.13.tar.gz#sha256=c65cb9ccd78a4ede00c3209579173e4f7e67598daf6dc079676a0e8982163f5b (from https://pypi.org/simple/pybigwig/), version: 0.3.13 2021-07-10T11:15:55,760 Found link https://files.pythonhosted.org/packages/b2/5f/31086a89f067e0f0ad3b5b039e1d99ed7f4e5e7bc0fe156aef724a45ed06/pyBigWig-0.3.14.tar.gz#sha256=28bed8b4491df8704d54247d5d6e2d77a9b6fe4be6a77b8246e0ee3fb531c206 (from https://pypi.org/simple/pybigwig/), version: 0.3.14 2021-07-10T11:15:55,761 Found link https://files.pythonhosted.org/packages/99/c0/c53056f4496b2bacfaa014f0f3fc74934827cd4ce933f94fe870eaf65181/pyBigWig-0.3.15.tar.gz#sha256=7e2c85b9ca826007a6c56907343b31fb86058a3b8d0bc9138c9de0a759d02e82 (from https://pypi.org/simple/pybigwig/), version: 0.3.15 2021-07-10T11:15:55,761 Found link https://files.pythonhosted.org/packages/67/c8/741cca63e6a8688ef22a605bb06cc849fc57df419027013f2d1181f184f8/pyBigWig-0.3.16.tar.gz#sha256=1ec93c67089147cc918c7dbd69ff3cfbe0648e5b7b2e809c51f70daf668215d1 (from https://pypi.org/simple/pybigwig/), version: 0.3.16 2021-07-10T11:15:55,761 Found link https://files.pythonhosted.org/packages/b0/e2/cf945d541a10bb9c675f986d5bf0b0268544721054d17cc6260cfcfb3685/pyBigWig-0.3.17.tar.gz#sha256=41f64f802689ed72e15296a21a4b7abd3904780b2e4f8146fd29098fc836fd94 (from https://pypi.org/simple/pybigwig/), version: 0.3.17 2021-07-10T11:15:55,761 Found link https://files.pythonhosted.org/packages/23/29/b51c3580427dd66dfecd63ffbe2dfa37175d3c898b289a3f27def1be34c0/pyBigWig-0.3.18.tar.gz#sha256=4c2a8c571b4100ad7c4c318c142eb48558646be52aaab28215a70426f5be31bc (from https://pypi.org/simple/pybigwig/), version: 0.3.18 2021-07-10T11:15:55,762 Skipping link: not a file: https://pypi.org/simple/pybigwig/ 2021-07-10T11:15:55,784 Given no hashes to check 1 links for project 'pybigwig': discarding no candidates 2021-07-10T11:15:55,802 Collecting pybigwig==0.2.0 2021-07-10T11:15:55,804 Created temporary directory: /tmp/pip-unpack-kjobypg9 2021-07-10T11:15:55,988 Downloading pyBigWig-0.2.0.tar.gz (47 kB) 2021-07-10T11:15:56,070 Added pybigwig==0.2.0 from https://files.pythonhosted.org/packages/c9/1a/656e854a640b19e926becbb977a9eae2b7603d42c784a299f43f53444d75/pyBigWig-0.2.0.tar.gz#sha256=80f2de84cbc19829f57e2dfd907598e7775352c11b45a5cb9e38e4cf3895d064 to build tracker '/tmp/pip-req-tracker-r1bz50zz' 2021-07-10T11:15:56,071 Running setup.py (path:/tmp/pip-wheel-kl0_db8k/pybigwig_adb55acdc612477bb5aee4b6be62d193/setup.py) egg_info for package pybigwig 2021-07-10T11:15:56,071 Created temporary directory: /tmp/pip-pip-egg-info-nnk8aqxv 2021-07-10T11:15:56,072 Running command python setup.py egg_info 2021-07-10T11:15:56,766 /usr/local/lib/python3.9/dist-packages/setuptools/dist.py:697: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead 2021-07-10T11:15:56,766 warnings.warn( 2021-07-10T11:15:56,880 running egg_info 2021-07-10T11:15:56,882 creating /tmp/pip-pip-egg-info-nnk8aqxv/pyBigWig.egg-info 2021-07-10T11:15:56,883 writing /tmp/pip-pip-egg-info-nnk8aqxv/pyBigWig.egg-info/PKG-INFO 2021-07-10T11:15:56,885 writing dependency_links to /tmp/pip-pip-egg-info-nnk8aqxv/pyBigWig.egg-info/dependency_links.txt 2021-07-10T11:15:56,888 writing top-level names to /tmp/pip-pip-egg-info-nnk8aqxv/pyBigWig.egg-info/top_level.txt 2021-07-10T11:15:56,889 writing manifest file '/tmp/pip-pip-egg-info-nnk8aqxv/pyBigWig.egg-info/SOURCES.txt' 2021-07-10T11:15:57,200 reading manifest file '/tmp/pip-pip-egg-info-nnk8aqxv/pyBigWig.egg-info/SOURCES.txt' 2021-07-10T11:15:57,201 reading manifest template 'MANIFEST.in' 2021-07-10T11:15:57,204 warning: no files found matching 'galaxy/*' 2021-07-10T11:15:57,205 warning: no previously-included files found matching 'pyBigWig.egg-info/*' 2021-07-10T11:15:57,206 adding license file 'LICENSE.txt' 2021-07-10T11:15:57,208 writing manifest file '/tmp/pip-pip-egg-info-nnk8aqxv/pyBigWig.egg-info/SOURCES.txt' 2021-07-10T11:15:57,282 Source in /tmp/pip-wheel-kl0_db8k/pybigwig_adb55acdc612477bb5aee4b6be62d193 has version 0.2.0, which satisfies requirement pybigwig==0.2.0 from https://files.pythonhosted.org/packages/c9/1a/656e854a640b19e926becbb977a9eae2b7603d42c784a299f43f53444d75/pyBigWig-0.2.0.tar.gz#sha256=80f2de84cbc19829f57e2dfd907598e7775352c11b45a5cb9e38e4cf3895d064 2021-07-10T11:15:57,283 Removed pybigwig==0.2.0 from https://files.pythonhosted.org/packages/c9/1a/656e854a640b19e926becbb977a9eae2b7603d42c784a299f43f53444d75/pyBigWig-0.2.0.tar.gz#sha256=80f2de84cbc19829f57e2dfd907598e7775352c11b45a5cb9e38e4cf3895d064 from build tracker '/tmp/pip-req-tracker-r1bz50zz' 2021-07-10T11:15:57,286 Created temporary directory: /tmp/pip-unpack-rt4d1mj_ 2021-07-10T11:15:57,287 Building wheels for collected packages: pybigwig 2021-07-10T11:15:57,291 Created temporary directory: /tmp/pip-wheel-xdclxz2l 2021-07-10T11:15:57,291 Building wheel for pybigwig (setup.py): started 2021-07-10T11:15:57,292 Destination directory: /tmp/pip-wheel-xdclxz2l 2021-07-10T11:15:57,292 Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-kl0_db8k/pybigwig_adb55acdc612477bb5aee4b6be62d193/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-kl0_db8k/pybigwig_adb55acdc612477bb5aee4b6be62d193/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-xdclxz2l 2021-07-10T11:15:57,988 /usr/local/lib/python3.9/dist-packages/setuptools/dist.py:697: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead 2021-07-10T11:15:57,988 warnings.warn( 2021-07-10T11:15:58,119 running bdist_wheel 2021-07-10T11:15:58,273 running build 2021-07-10T11:15:58,274 running build_py 2021-07-10T11:15:58,412 creating build 2021-07-10T11:15:58,412 creating build/lib.linux-armv7l-3.9 2021-07-10T11:15:58,413 creating build/lib.linux-armv7l-3.9/pyBigWigTest 2021-07-10T11:15:58,414 copying pyBigWigTest/test.py -> build/lib.linux-armv7l-3.9/pyBigWigTest 2021-07-10T11:15:58,416 copying pyBigWigTest/__init__.py -> build/lib.linux-armv7l-3.9/pyBigWigTest 2021-07-10T11:15:58,417 running egg_info 2021-07-10T11:15:58,430 writing pyBigWig.egg-info/PKG-INFO 2021-07-10T11:15:58,432 writing dependency_links to pyBigWig.egg-info/dependency_links.txt 2021-07-10T11:15:58,434 writing top-level names to pyBigWig.egg-info/top_level.txt 2021-07-10T11:15:58,439 reading manifest file 'pyBigWig.egg-info/SOURCES.txt' 2021-07-10T11:15:58,441 reading manifest template 'MANIFEST.in' 2021-07-10T11:15:58,444 warning: no files found matching 'galaxy/*' 2021-07-10T11:15:58,445 adding license file 'LICENSE.txt' 2021-07-10T11:15:58,448 writing manifest file 'pyBigWig.egg-info/SOURCES.txt' 2021-07-10T11:15:58,450 copying pyBigWigTest/test.bw -> build/lib.linux-armv7l-3.9/pyBigWigTest 2021-07-10T11:15:58,453 running build_ext 2021-07-10T11:15:58,458 building 'pyBigWig' extension 2021-07-10T11:15:58,458 creating build/temp.linux-armv7l-3.9 2021-07-10T11:15:58,459 creating build/temp.linux-armv7l-3.9/libBigWig 2021-07-10T11:15:58,459 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IlibBigWig -I/usr/include/python3.9 -I/usr/include/python3.9 -c libBigWig/bwRead.c -o build/temp.linux-armv7l-3.9/libBigWig/bwRead.o 2021-07-10T11:15:59,113 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IlibBigWig -I/usr/include/python3.9 -I/usr/include/python3.9 -c libBigWig/bwStats.c -o build/temp.linux-armv7l-3.9/libBigWig/bwStats.o 2021-07-10T11:15:59,346 libBigWig/bwStats.c: In function ‘getVals’: 2021-07-10T11:15:59,347 libBigWig/bwStats.c:98:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uLongf’ {aka ‘long unsigned int’} [-Wsign-compare] 2021-07-10T11:15:59,347 98 | while((void*)p-buf < sz) { 2021-07-10T11:15:59,347 | ^ 2021-07-10T11:15:59,355 libBigWig/bwStats.c: In function ‘bwStats’: 2021-07-10T11:15:59,355 libBigWig/bwStats.c:479:12: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 2021-07-10T11:15:59,355 479 | if(tid == -1) return NULL; 2021-07-10T11:15:59,356 | ^~ 2021-07-10T11:15:59,941 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IlibBigWig -I/usr/include/python3.9 -I/usr/include/python3.9 -c libBigWig/bwValues.c -o build/temp.linux-armv7l-3.9/libBigWig/bwValues.o 2021-07-10T11:16:00,140 libBigWig/bwValues.c: In function ‘bwGetOverlappingBlocks’: 2021-07-10T11:16:00,140 libBigWig/bwValues.c:291:12: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 2021-07-10T11:16:00,140 291 | if(tid == -1) { 2021-07-10T11:16:00,140 | ^~ 2021-07-10T11:16:00,144 libBigWig/bwValues.c: In function ‘bwGetOverlappingIntervals’: 2021-07-10T11:16:00,144 libBigWig/bwValues.c:450:12: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 2021-07-10T11:16:00,145 450 | if(tid == -1) return NULL; 2021-07-10T11:16:00,145 | ^~ 2021-07-10T11:16:00,820 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IlibBigWig -I/usr/include/python3.9 -I/usr/include/python3.9 -c libBigWig/bwWrite.c -o build/temp.linux-armv7l-3.9/libBigWig/bwWrite.o 2021-07-10T11:16:01,041 libBigWig/bwWrite.c: In function ‘writeChromList’: 2021-07-10T11:16:01,041 libBigWig/bwWrite.c:105:15: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long long unsigned int’} and ‘int64_t’ {aka ‘long long int’} [-Wsign-compare] 2021-07-10T11:16:01,042 105 | for(i=0; inKeys; i++) { 2021-07-10T11:16:01,042 | ^ 2021-07-10T11:16:01,050 libBigWig/bwWrite.c: In function ‘bwAddIntervals’: 2021-07-10T11:16:01,050 libBigWig/bwWrite.c:359:12: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 2021-07-10T11:16:01,050 359 | if(tid == -1) return 5; 2021-07-10T11:16:01,050 | ^~ 2021-07-10T11:16:01,051 libBigWig/bwWrite.c:386:20: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 2021-07-10T11:16:01,051 386 | if(tid == -1) return 10; 2021-07-10T11:16:01,051 | ^~ 2021-07-10T11:16:01,054 libBigWig/bwWrite.c: In function ‘bwAddIntervalSpans’: 2021-07-10T11:16:01,054 libBigWig/bwWrite.c:444:12: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 2021-07-10T11:16:01,054 444 | if(tid == -1) return 5; 2021-07-10T11:16:01,054 | ^~ 2021-07-10T11:16:01,056 libBigWig/bwWrite.c: In function ‘bwAddIntervalSpanSteps’: 2021-07-10T11:16:01,057 libBigWig/bwWrite.c:500:12: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 2021-07-10T11:16:01,057 500 | if(tid == -1) return 4; 2021-07-10T11:16:01,057 | ^~ 2021-07-10T11:16:02,789 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IlibBigWig -I/usr/include/python3.9 -I/usr/include/python3.9 -c libBigWig/io.c -o build/temp.linux-armv7l-3.9/libBigWig/io.o 2021-07-10T11:16:02,977 libBigWig/io.c: In function ‘urlFetchData’: 2021-07-10T11:16:02,977 libBigWig/io.c:25:21: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 2021-07-10T11:16:02,978 25 | if(URL->filePos != -1) URL->filePos += URL->bufLen; 2021-07-10T11:16:02,978 | ^~ 2021-07-10T11:16:02,978 libBigWig/io.c:29:22: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 3 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 2021-07-10T11:16:02,979 29 | sprintf(range,"%lu-%lu", URL->filePos, URL->filePos+bufSize-1); 2021-07-10T11:16:02,979 | ~~^ ~~~~~~~~~~~~ 2021-07-10T11:16:02,979 | | | 2021-07-10T11:16:02,979 | | size_t {aka unsigned int} 2021-07-10T11:16:02,979 | long unsigned int 2021-07-10T11:16:02,979 | %u 2021-07-10T11:16:02,986 libBigWig/io.c: In function ‘urlSeek’: 2021-07-10T11:16:02,987 libBigWig/io.c:121:30: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 3 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 2021-07-10T11:16:02,987 121 | sprintf(range,"%lu-%lu", pos, pos+URL->bufSize-1); 2021-07-10T11:16:02,987 | ~~^ ~~~ 2021-07-10T11:16:02,987 | | | 2021-07-10T11:16:02,987 | | size_t {aka unsigned int} 2021-07-10T11:16:02,988 | long unsigned int 2021-07-10T11:16:02,988 | %u 2021-07-10T11:16:02,988 libBigWig/io.c:121:34: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 4 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 2021-07-10T11:16:02,988 121 | sprintf(range,"%lu-%lu", pos, pos+URL->bufSize-1); 2021-07-10T11:16:02,988 | ~~^ ~~~~~~~~~~~~~~~~~~ 2021-07-10T11:16:02,989 | | | 2021-07-10T11:16:02,989 | long unsigned int size_t {aka unsigned int} 2021-07-10T11:16:02,989 | %u 2021-07-10T11:16:03,006 libBigWig/io.c: In function ‘urlOpen’: 2021-07-10T11:16:03,006 libBigWig/io.c:189:33: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 3 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 2021-07-10T11:16:03,006 189 | sprintf(range, "0-%lu", URL->bufSize-1); 2021-07-10T11:16:03,006 | ~~^ ~~~~~~~~~~~~~~ 2021-07-10T11:16:03,007 | | | 2021-07-10T11:16:03,007 | | size_t {aka unsigned int} 2021-07-10T11:16:03,007 | long unsigned int 2021-07-10T11:16:03,007 | %u 2021-07-10T11:16:03,339 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IlibBigWig -I/usr/include/python3.9 -I/usr/include/python3.9 -c pyBigWig.c -o build/temp.linux-armv7l-3.9/pyBigWig.o 2021-07-10T11:16:03,740 pyBigWig.c: In function ‘pyBwGetStats’: 2021-07-10T11:16:03,741 pyBigWig.c:151:13: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘int’ [-Wsign-compare] 2021-07-10T11:16:03,741 151 | if(endl == -1 && tid != -1) endl = bw->cl->len[tid]; 2021-07-10T11:16:03,741 | ^~ 2021-07-10T11:16:03,741 pyBigWig.c:151:26: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 2021-07-10T11:16:03,741 151 | if(endl == -1 && tid != -1) endl = bw->cl->len[tid]; 2021-07-10T11:16:03,741 | ^~ 2021-07-10T11:16:03,742 pyBigWig.c:152:12: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 2021-07-10T11:16:03,742 152 | if(tid == -1 || startl > end || endl > end) { 2021-07-10T11:16:03,742 | ^~ 2021-07-10T11:16:03,742 pyBigWig.c: In function ‘pyBwGetValues’: 2021-07-10T11:16:03,742 pyBigWig.c:199:13: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘int’ [-Wsign-compare] 2021-07-10T11:16:03,742 199 | if(endl == -1 && tid != -1) endl = bw->cl->len[tid]; 2021-07-10T11:16:03,742 | ^~ 2021-07-10T11:16:03,743 pyBigWig.c:199:26: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 2021-07-10T11:16:03,743 199 | if(endl == -1 && tid != -1) endl = bw->cl->len[tid]; 2021-07-10T11:16:03,743 | ^~ 2021-07-10T11:16:03,743 pyBigWig.c:200:12: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 2021-07-10T11:16:03,743 200 | if(tid == -1 || startl > end || endl > end) { 2021-07-10T11:16:03,743 | ^~ 2021-07-10T11:16:03,743 pyBigWig.c:218:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 2021-07-10T11:16:03,744 218 | for(i=0; il; i++) PyList_SetItem(ret, i, PyFloat_FromDouble(o->value[i])); 2021-07-10T11:16:03,744 | ^ 2021-07-10T11:16:03,744 pyBigWig.c: In function ‘pyBwGetIntervals’: 2021-07-10T11:16:03,744 pyBigWig.c:240:13: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘int’ [-Wsign-compare] 2021-07-10T11:16:03,744 240 | if(endl == -1 && tid != -1) endl = bw->cl->len[tid]; 2021-07-10T11:16:03,744 | ^~ 2021-07-10T11:16:03,744 pyBigWig.c:240:26: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 2021-07-10T11:16:03,745 240 | if(endl == -1 && tid != -1) endl = bw->cl->len[tid]; 2021-07-10T11:16:03,745 | ^~ 2021-07-10T11:16:03,745 pyBigWig.c:241:12: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 2021-07-10T11:16:03,745 241 | if(tid == -1 || startl > end || endl > end) { 2021-07-10T11:16:03,745 | ^~ 2021-07-10T11:16:03,745 pyBigWig.c: In function ‘Numeric2Uint’: 2021-07-10T11:16:03,746 pyBigWig.c:310:10: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘unsigned int’ [-Wsign-compare] 2021-07-10T11:16:03,746 310 | if(l > 0xFFFFFFFF) { 2021-07-10T11:16:03,746 | ^ 2021-07-10T11:16:03,747 pyBigWig.c: In function ‘pyBwAddHeader’: 2021-07-10T11:16:03,747 pyBigWig.c:390:20: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘unsigned int’ [-Wsign-compare] 2021-07-10T11:16:03,748 390 | if(zoomTmp > 0xFFFFFFFF) { 2021-07-10T11:16:03,748 | ^ 2021-07-10T11:16:03,752 pyBigWig.c: In function ‘canAppend’: 2021-07-10T11:16:03,753 pyBigWig.c:531:20: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int32_t’ {aka ‘int’} [-Wsign-compare] 2021-07-10T11:16:03,753 531 | if(tid != self->lastTid) return 0; 2021-07-10T11:16:03,753 | ^~ 2021-07-10T11:16:03,754 pyBigWig.c:544:16: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int32_t’ {aka ‘int’} [-Wsign-compare] 2021-07-10T11:16:03,754 544 | if(tid != self->lastTid) return 0; 2021-07-10T11:16:03,754 | ^~ 2021-07-10T11:16:03,754 pyBigWig.c:553:16: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int32_t’ {aka ‘int’} [-Wsign-compare] 2021-07-10T11:16:03,755 553 | if(tid != self->lastTid) return 0; 2021-07-10T11:16:03,755 | ^~ 2021-07-10T11:16:04,798 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/libBigWig/bwRead.o build/temp.linux-armv7l-3.9/libBigWig/bwStats.o build/temp.linux-armv7l-3.9/libBigWig/bwValues.o build/temp.linux-armv7l-3.9/libBigWig/bwWrite.o build/temp.linux-armv7l-3.9/libBigWig/io.o build/temp.linux-armv7l-3.9/pyBigWig.o -L/usr/lib/python3.9/config-3.9-arm-linux-gnueabihf -lm -lz -lcurl -lpython3.9 -o build/lib.linux-armv7l-3.9/pyBigWig.cpython-39-arm-linux-gnueabihf.so 2021-07-10T11:16:04,992 installing to build/bdist.linux-armv7l/wheel 2021-07-10T11:16:04,992 running install 2021-07-10T11:16:04,993 running install_lib 2021-07-10T11:16:04,997 creating build/bdist.linux-armv7l 2021-07-10T11:16:04,997 creating build/bdist.linux-armv7l/wheel 2021-07-10T11:16:04,999 creating build/bdist.linux-armv7l/wheel/pyBigWigTest 2021-07-10T11:16:05,000 copying build/lib.linux-armv7l-3.9/pyBigWigTest/test.py -> build/bdist.linux-armv7l/wheel/pyBigWigTest 2021-07-10T11:16:05,003 copying build/lib.linux-armv7l-3.9/pyBigWigTest/test.bw -> build/bdist.linux-armv7l/wheel/pyBigWigTest 2021-07-10T11:16:05,006 copying build/lib.linux-armv7l-3.9/pyBigWigTest/__init__.py -> build/bdist.linux-armv7l/wheel/pyBigWigTest 2021-07-10T11:16:05,007 copying build/lib.linux-armv7l-3.9/pyBigWig.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel 2021-07-10T11:16:05,017 running install_egg_info 2021-07-10T11:16:05,026 Copying pyBigWig.egg-info to build/bdist.linux-armv7l/wheel/pyBigWig-0.2.0-py3.9.egg-info 2021-07-10T11:16:05,036 running install_scripts 2021-07-10T11:16:05,107 adding license file "LICENSE.txt" (matched pattern "LICEN[CS]E*") 2021-07-10T11:16:05,112 creating build/bdist.linux-armv7l/wheel/pyBigWig-0.2.0.dist-info/WHEEL 2021-07-10T11:16:05,114 creating '/tmp/pip-wheel-xdclxz2l/pyBigWig-0.2.0-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2021-07-10T11:16:05,178 adding 'pyBigWig.cpython-39-arm-linux-gnueabihf.so' 2021-07-10T11:16:05,183 adding 'pyBigWigTest/__init__.py' 2021-07-10T11:16:05,184 adding 'pyBigWigTest/test.bw' 2021-07-10T11:16:05,186 adding 'pyBigWigTest/test.py' 2021-07-10T11:16:05,187 adding 'pyBigWig-0.2.0.dist-info/LICENSE.txt' 2021-07-10T11:16:05,188 adding 'pyBigWig-0.2.0.dist-info/METADATA' 2021-07-10T11:16:05,189 adding 'pyBigWig-0.2.0.dist-info/WHEEL' 2021-07-10T11:16:05,189 adding 'pyBigWig-0.2.0.dist-info/top_level.txt' 2021-07-10T11:16:05,190 adding 'pyBigWig-0.2.0.dist-info/RECORD' 2021-07-10T11:16:05,193 removing build/bdist.linux-armv7l/wheel 2021-07-10T11:16:05,283 Building wheel for pybigwig (setup.py): finished with status 'done' 2021-07-10T11:16:05,287 Created wheel for pybigwig: filename=pyBigWig-0.2.0-cp39-cp39-linux_armv7l.whl size=121151 sha256=834780f18dc7a2d64d89c5efa220d8488a49b40a414044990add6c428476b184 2021-07-10T11:16:05,287 Stored in directory: /tmp/pip-ephem-wheel-cache-tvg68b3l/wheels/4d/5d/d8/c5d362d689ffc3d1fe0220e5a88a1f8ad4137f249f637493d6 2021-07-10T11:16:05,296 Successfully built pybigwig 2021-07-10T11:16:05,302 Removed build tracker: '/tmp/pip-req-tracker-r1bz50zz'