2021-07-10T11:24:49,742 Created temporary directory: /tmp/pip-ephem-wheel-cache-xdaahg5s
2021-07-10T11:24:49,745 Created temporary directory: /tmp/pip-req-tracker-k25_qbjq
2021-07-10T11:24:49,746 Initialized build tracking at /tmp/pip-req-tracker-k25_qbjq
2021-07-10T11:24:49,746 Created build tracker: /tmp/pip-req-tracker-k25_qbjq
2021-07-10T11:24:49,746 Entered build tracker: /tmp/pip-req-tracker-k25_qbjq
2021-07-10T11:24:49,747 Created temporary directory: /tmp/pip-wheel-99szp_ch
2021-07-10T11:24:49,783 1 location(s) to search for versions of bhmm:
2021-07-10T11:24:49,783 * https://pypi.org/simple/bhmm/
2021-07-10T11:24:49,783 Fetching project page and analyzing links: https://pypi.org/simple/bhmm/
2021-07-10T11:24:49,784 Getting page https://pypi.org/simple/bhmm/
2021-07-10T11:24:49,785 Found index url https://pypi.org/simple
2021-07-10T11:24:49,879   Found link https://files.pythonhosted.org/packages/61/56/3de716dfa04d42acf328f665889a2ac487421543ad38ad44f4e55f8155d6/bhmm-0.3.0.tar.gz#sha256=d84fd39fcfc0b933fb835cd4af69f61fd704347e01c5eb2a3e7ce6579c184122 (from https://pypi.org/simple/bhmm/), version: 0.3.0
2021-07-10T11:24:49,879   Found link https://files.pythonhosted.org/packages/b3/52/116bf9a87fb6d56bca3d8d0c87bef8597b43e6cf0a6f2bf4aca530e4ce7f/bhmm-0.4.2.tar.gz#sha256=1bc7a713bbda2c81878d0d798d51692fedfa18707543095e2b9584989cf432b3 (from https://pypi.org/simple/bhmm/), version: 0.4.2
2021-07-10T11:24:49,879   Found link https://files.pythonhosted.org/packages/ca/58/c0eb124efbdf18cb62675a16788ec84b541a4358ebf46e1add74284c9f02/bhmm-0.5.0.tar.gz#sha256=4c094c054646e8baf850699aab398d385a79cf51d91d15f715e6c5d69d74b198 (from https://pypi.org/simple/bhmm/), version: 0.5.0
2021-07-10T11:24:49,880   Found link https://files.pythonhosted.org/packages/91/b4/c01c15efdab2a542db8cae6d49ab860644eea174a3822685cef3a3ed93ac/bhmm-0.5.1.tar.gz#sha256=7bae6d51ddfc88c2cec84ce408a2792f91bfef353621798c597773b8daab487e (from https://pypi.org/simple/bhmm/), version: 0.5.1
2021-07-10T11:24:49,880   Found link https://files.pythonhosted.org/packages/14/17/9043b8dfb2d04ab7de09b3057d37c1385056d63702e4cca539b121e806e6/bhmm-0.5.2.tar.gz#sha256=c2848188a73e7da6735ac7a636f8892f2dd939a6148437cc8fd84c4d2f5b21fb (from https://pypi.org/simple/bhmm/), version: 0.5.2
2021-07-10T11:24:49,880   Found link https://files.pythonhosted.org/packages/ee/78/d607b2d74022a4146c5d1940f9e78ffaaabc55c1defdbe9ddcba92ba08a4/bhmm-0.5.3.tar.gz#sha256=77d4e4ad546537a0f0efd78b3180a7d0d0836e92d9d5efc698fcd7740da46d6f (from https://pypi.org/simple/bhmm/), version: 0.5.3
2021-07-10T11:24:49,880   Found link https://files.pythonhosted.org/packages/a0/16/4ab0903a8a3a9ae3337193221d223b8e2fe8701960b680018bbec5342a03/bhmm-0.6.tar.gz#sha256=a5b0609801d9a61cf36892f975c67294dc24ccef8d1906031c065ec286d56fae (from https://pypi.org/simple/bhmm/), version: 0.6
2021-07-10T11:24:49,881   Found link https://files.pythonhosted.org/packages/b9/6c/552b35b4765fadfcfe796b2b6d28fe38d622a28b74dd882f7980a4acb699/bhmm-0.6.1.tar.gz#sha256=eb5a1d93d7c46f6d2ffcb6901d2bdf3297dcbd4b8835a9da1cbd98c9567f265e (from https://pypi.org/simple/bhmm/), version: 0.6.1
2021-07-10T11:24:49,881   Found link https://files.pythonhosted.org/packages/10/9c/abea596a522277674836b8ec398a30092933826cffc04ad1823be0f06b5c/bhmm-0.6.2.tar.gz#sha256=c2709c101c0e3921aac992b7b24d279f24c1455313b4eae90da83b6332cfa464 (from https://pypi.org/simple/bhmm/), version: 0.6.2
2021-07-10T11:24:49,881   Found link https://files.pythonhosted.org/packages/ac/91/27b35bfc73cfe529ed9d4133b2fa20180ccaa2c6c9f55e49779f1319ecf0/bhmm-0.6.3.tar.gz#sha256=f7a920542a18e65debb894e4287990255e32306f026892fa3b82e902d45e5dd2 (from https://pypi.org/simple/bhmm/), version: 0.6.3
2021-07-10T11:24:49,882 Skipping link: not a file: https://pypi.org/simple/bhmm/
2021-07-10T11:24:49,900 Given no hashes to check 1 links for project 'bhmm': discarding no candidates
2021-07-10T11:24:49,919 Collecting bhmm==0.5.3
2021-07-10T11:24:49,921   Created temporary directory: /tmp/pip-unpack-9aiw0yej
2021-07-10T11:24:50,359   Downloading bhmm-0.5.3.tar.gz (281 kB)
2021-07-10T11:24:50,653   Added bhmm==0.5.3 from https://files.pythonhosted.org/packages/ee/78/d607b2d74022a4146c5d1940f9e78ffaaabc55c1defdbe9ddcba92ba08a4/bhmm-0.5.3.tar.gz#sha256=77d4e4ad546537a0f0efd78b3180a7d0d0836e92d9d5efc698fcd7740da46d6f to build tracker '/tmp/pip-req-tracker-k25_qbjq'
2021-07-10T11:24:50,654     Running setup.py (path:/tmp/pip-wheel-99szp_ch/bhmm_0fc2e042b75841ab8df887efb1b934a7/setup.py) egg_info for package bhmm
2021-07-10T11:24:50,655     Created temporary directory: /tmp/pip-pip-egg-info-pro7t7mh
2021-07-10T11:24:50,655     Running command python setup.py egg_info
2021-07-10T11:24:51,770     running egg_info
2021-07-10T11:24:51,772     creating /tmp/pip-pip-egg-info-pro7t7mh/bhmm.egg-info
2021-07-10T11:24:51,773     writing /tmp/pip-pip-egg-info-pro7t7mh/bhmm.egg-info/PKG-INFO
2021-07-10T11:24:51,776     writing dependency_links to /tmp/pip-pip-egg-info-pro7t7mh/bhmm.egg-info/dependency_links.txt
2021-07-10T11:24:51,778     writing requirements to /tmp/pip-pip-egg-info-pro7t7mh/bhmm.egg-info/requires.txt
2021-07-10T11:24:52,959     /usr/local/lib/python3.9/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-99szp_ch/bhmm_0fc2e042b75841ab8df887efb1b934a7/bhmm/hidden/impl_c/hidden.pyx
2021-07-10T11:24:52,960       tree = Parsing.p_module(s, pxd, full_module_name)
2021-07-10T11:24:54,599     /usr/local/lib/python3.9/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-99szp_ch/bhmm_0fc2e042b75841ab8df887efb1b934a7/bhmm/output_models/impl_c/discrete.pyx
2021-07-10T11:24:54,599       tree = Parsing.p_module(s, pxd, full_module_name)
2021-07-10T11:24:55,909     /usr/local/lib/python3.9/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-99szp_ch/bhmm_0fc2e042b75841ab8df887efb1b934a7/bhmm/output_models/impl_c/gaussian.pyx
2021-07-10T11:24:55,910       tree = Parsing.p_module(s, pxd, full_module_name)
2021-07-10T11:24:57,333     Compiling ./bhmm/hidden/impl_c/hidden.pyx because it depends on /usr/local/lib/python3.9/dist-packages/Cython/Includes/libc/string.pxd.
2021-07-10T11:24:57,333     Compiling ./bhmm/output_models/impl_c/discrete.pyx because it depends on /usr/local/lib/python3.9/dist-packages/Cython/Includes/libc/string.pxd.
2021-07-10T11:24:57,334     Compiling ./bhmm/output_models/impl_c/gaussian.pyx because it depends on /usr/local/lib/python3.9/dist-packages/Cython/Includes/libc/string.pxd.
2021-07-10T11:24:57,334     [1/3] Cythonizing ./bhmm/hidden/impl_c/hidden.pyx
2021-07-10T11:24:57,334     [2/3] Cythonizing ./bhmm/output_models/impl_c/discrete.pyx
2021-07-10T11:24:57,334     [3/3] Cythonizing ./bhmm/output_models/impl_c/gaussian.pyx
2021-07-10T11:24:57,334     writing top-level names to /tmp/pip-pip-egg-info-pro7t7mh/bhmm.egg-info/top_level.txt
2021-07-10T11:24:57,336     writing manifest file '/tmp/pip-pip-egg-info-pro7t7mh/bhmm.egg-info/SOURCES.txt'
2021-07-10T11:24:57,408     reading manifest file '/tmp/pip-pip-egg-info-pro7t7mh/bhmm.egg-info/SOURCES.txt'
2021-07-10T11:24:57,412     reading manifest template 'MANIFEST.in'
2021-07-10T11:24:57,549     writing manifest file '/tmp/pip-pip-egg-info-pro7t7mh/bhmm.egg-info/SOURCES.txt'
2021-07-10T11:24:57,786   Source in /tmp/pip-wheel-99szp_ch/bhmm_0fc2e042b75841ab8df887efb1b934a7 has version 0.5.3, which satisfies requirement bhmm==0.5.3 from https://files.pythonhosted.org/packages/ee/78/d607b2d74022a4146c5d1940f9e78ffaaabc55c1defdbe9ddcba92ba08a4/bhmm-0.5.3.tar.gz#sha256=77d4e4ad546537a0f0efd78b3180a7d0d0836e92d9d5efc698fcd7740da46d6f
2021-07-10T11:24:57,787   Removed bhmm==0.5.3 from https://files.pythonhosted.org/packages/ee/78/d607b2d74022a4146c5d1940f9e78ffaaabc55c1defdbe9ddcba92ba08a4/bhmm-0.5.3.tar.gz#sha256=77d4e4ad546537a0f0efd78b3180a7d0d0836e92d9d5efc698fcd7740da46d6f from build tracker '/tmp/pip-req-tracker-k25_qbjq'
2021-07-10T11:24:57,791 Created temporary directory: /tmp/pip-unpack-13hcmntm
2021-07-10T11:24:57,792 Building wheels for collected packages: bhmm
2021-07-10T11:24:57,796   Created temporary directory: /tmp/pip-wheel-_1hzpqz8
2021-07-10T11:24:57,797   Building wheel for bhmm (setup.py): started
2021-07-10T11:24:57,797   Destination directory: /tmp/pip-wheel-_1hzpqz8
2021-07-10T11:24:57,797   Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-99szp_ch/bhmm_0fc2e042b75841ab8df887efb1b934a7/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-99szp_ch/bhmm_0fc2e042b75841ab8df887efb1b934a7/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-_1hzpqz8
2021-07-10T11:24:58,675   running bdist_wheel
2021-07-10T11:24:59,641   running build
2021-07-10T11:24:59,642   running build_py
2021-07-10T11:24:59,647   creating build
2021-07-10T11:24:59,648   creating build/lib.linux-armv7l-3.9
2021-07-10T11:24:59,648   creating build/lib.linux-armv7l-3.9/bhmm
2021-07-10T11:24:59,649   copying bhmm/api.py -> build/lib.linux-armv7l-3.9/bhmm
2021-07-10T11:24:59,652   copying bhmm/version.py -> build/lib.linux-armv7l-3.9/bhmm
2021-07-10T11:24:59,653   copying bhmm/__init__.py -> build/lib.linux-armv7l-3.9/bhmm
2021-07-10T11:24:59,656   creating build/lib.linux-armv7l-3.9/bhmm/tests
2021-07-10T11:24:59,657   copying bhmm/tests/test_bhmm.py -> build/lib.linux-armv7l-3.9/bhmm/tests
2021-07-10T11:24:59,659   copying bhmm/tests/test_init.py -> build/lib.linux-armv7l-3.9/bhmm/tests
2021-07-10T11:24:59,661   copying bhmm/tests/benchmark_hidden.py -> build/lib.linux-armv7l-3.9/bhmm/tests
2021-07-10T11:24:59,663   copying bhmm/tests/test_mlhmm.py -> build/lib.linux-armv7l-3.9/bhmm/tests
2021-07-10T11:24:59,666   copying bhmm/tests/test_testsystems.py -> build/lib.linux-armv7l-3.9/bhmm/tests
2021-07-10T11:24:59,667   copying bhmm/tests/test_hidden.py -> build/lib.linux-armv7l-3.9/bhmm/tests
2021-07-10T11:24:59,670   copying bhmm/tests/test_hmm.py -> build/lib.linux-armv7l-3.9/bhmm/tests
2021-07-10T11:24:59,672   copying bhmm/tests/__init__.py -> build/lib.linux-armv7l-3.9/bhmm/tests
2021-07-10T11:24:59,674   copying bhmm/tests/test_output_gaussian.py -> build/lib.linux-armv7l-3.9/bhmm/tests
2021-07-10T11:24:59,676   creating build/lib.linux-armv7l-3.9/bhmm/hidden
2021-07-10T11:24:59,677   copying bhmm/hidden/api.py -> build/lib.linux-armv7l-3.9/bhmm/hidden
2021-07-10T11:24:59,680   copying bhmm/hidden/__init__.py -> build/lib.linux-armv7l-3.9/bhmm/hidden
2021-07-10T11:24:59,683   creating build/lib.linux-armv7l-3.9/bhmm/output_models
2021-07-10T11:24:59,684   copying bhmm/output_models/discrete.py -> build/lib.linux-armv7l-3.9/bhmm/output_models
2021-07-10T11:24:59,687   copying bhmm/output_models/gaussian.py -> build/lib.linux-armv7l-3.9/bhmm/output_models
2021-07-10T11:24:59,690   copying bhmm/output_models/outputmodel.py -> build/lib.linux-armv7l-3.9/bhmm/output_models
2021-07-10T11:24:59,692   copying bhmm/output_models/__init__.py -> build/lib.linux-armv7l-3.9/bhmm/output_models
2021-07-10T11:24:59,695   creating build/lib.linux-armv7l-3.9/bhmm/hmm
2021-07-10T11:24:59,696   copying bhmm/hmm/gaussian_hmm.py -> build/lib.linux-armv7l-3.9/bhmm/hmm
2021-07-10T11:24:59,698   copying bhmm/hmm/discrete_hmm.py -> build/lib.linux-armv7l-3.9/bhmm/hmm
2021-07-10T11:24:59,700   copying bhmm/hmm/generic_sampled_hmm.py -> build/lib.linux-armv7l-3.9/bhmm/hmm
2021-07-10T11:24:59,703   copying bhmm/hmm/generic_hmm.py -> build/lib.linux-armv7l-3.9/bhmm/hmm
2021-07-10T11:24:59,706   copying bhmm/hmm/__init__.py -> build/lib.linux-armv7l-3.9/bhmm/hmm
2021-07-10T11:24:59,709   creating build/lib.linux-armv7l-3.9/bhmm/util
2021-07-10T11:24:59,710   copying bhmm/util/logger.py -> build/lib.linux-armv7l-3.9/bhmm/util
2021-07-10T11:24:59,712   copying bhmm/util/config.py -> build/lib.linux-armv7l-3.9/bhmm/util
2021-07-10T11:24:59,715   copying bhmm/util/analysis.py -> build/lib.linux-armv7l-3.9/bhmm/util
2021-07-10T11:24:59,717   copying bhmm/util/types.py -> build/lib.linux-armv7l-3.9/bhmm/util
2021-07-10T11:24:59,720   copying bhmm/util/testsystems.py -> build/lib.linux-armv7l-3.9/bhmm/util
2021-07-10T11:24:59,723   copying bhmm/util/statistics.py -> build/lib.linux-armv7l-3.9/bhmm/util
2021-07-10T11:24:59,725   copying bhmm/util/__init__.py -> build/lib.linux-armv7l-3.9/bhmm/util
2021-07-10T11:24:59,728   creating build/lib.linux-armv7l-3.9/bhmm/_external
2021-07-10T11:24:59,729   copying bhmm/_external/__init__.py -> build/lib.linux-armv7l-3.9/bhmm/_external
2021-07-10T11:24:59,731   creating build/lib.linux-armv7l-3.9/bhmm/init
2021-07-10T11:24:59,732   copying bhmm/init/discrete.py -> build/lib.linux-armv7l-3.9/bhmm/init
2021-07-10T11:24:59,734   copying bhmm/init/gaussian.py -> build/lib.linux-armv7l-3.9/bhmm/init
2021-07-10T11:24:59,736   copying bhmm/init/__init__.py -> build/lib.linux-armv7l-3.9/bhmm/init
2021-07-10T11:24:59,739   creating build/lib.linux-armv7l-3.9/bhmm/estimators
2021-07-10T11:24:59,740   copying bhmm/estimators/maximum_likelihood.py -> build/lib.linux-armv7l-3.9/bhmm/estimators
2021-07-10T11:24:59,742   copying bhmm/estimators/bayesian_sampling.py -> build/lib.linux-armv7l-3.9/bhmm/estimators
2021-07-10T11:24:59,745   copying bhmm/estimators/_tmatrix_disconnected.py -> build/lib.linux-armv7l-3.9/bhmm/estimators
2021-07-10T11:24:59,747   copying bhmm/estimators/__init__.py -> build/lib.linux-armv7l-3.9/bhmm/estimators
2021-07-10T11:24:59,750   creating build/lib.linux-armv7l-3.9/bhmm/hidden/impl_python
2021-07-10T11:24:59,751   copying bhmm/hidden/impl_python/hidden.py -> build/lib.linux-armv7l-3.9/bhmm/hidden/impl_python
2021-07-10T11:24:59,753   copying bhmm/hidden/impl_python/__init__.py -> build/lib.linux-armv7l-3.9/bhmm/hidden/impl_python
2021-07-10T11:24:59,756   creating build/lib.linux-armv7l-3.9/bhmm/hidden/impl_c
2021-07-10T11:24:59,757   copying bhmm/hidden/impl_c/__init__.py -> build/lib.linux-armv7l-3.9/bhmm/hidden/impl_c
2021-07-10T11:24:59,760   creating build/lib.linux-armv7l-3.9/bhmm/output_models/impl_c
2021-07-10T11:24:59,760   copying bhmm/output_models/impl_c/__init__.py -> build/lib.linux-armv7l-3.9/bhmm/output_models/impl_c
2021-07-10T11:24:59,765   creating build/lib.linux-armv7l-3.9/bhmm/_external/clustering
2021-07-10T11:24:59,766   copying bhmm/_external/clustering/__init__.py -> build/lib.linux-armv7l-3.9/bhmm/_external/clustering
2021-07-10T11:24:59,769   creating build/lib.linux-armv7l-3.9/bhmm/_external/sklearn
2021-07-10T11:24:59,769   copying bhmm/_external/sklearn/base.py -> build/lib.linux-armv7l-3.9/bhmm/_external/sklearn
2021-07-10T11:24:59,772   copying bhmm/_external/sklearn/utils.py -> build/lib.linux-armv7l-3.9/bhmm/_external/sklearn
2021-07-10T11:24:59,775   copying bhmm/_external/sklearn/__init__.py -> build/lib.linux-armv7l-3.9/bhmm/_external/sklearn
2021-07-10T11:24:59,777   creating build/lib.linux-armv7l-3.9/bhmm/_external/sklearn/mixture
2021-07-10T11:24:59,778   copying bhmm/_external/sklearn/mixture/gmm.py -> build/lib.linux-armv7l-3.9/bhmm/_external/sklearn/mixture
2021-07-10T11:24:59,782   copying bhmm/_external/sklearn/mixture/__init__.py -> build/lib.linux-armv7l-3.9/bhmm/_external/sklearn/mixture
2021-07-10T11:24:59,783   creating build/lib.linux-armv7l-3.9/bhmm/tests/data
2021-07-10T11:24:59,784   copying bhmm/tests/data/2well_energy.dat -> build/lib.linux-armv7l-3.9/bhmm/tests/data
2021-07-10T11:24:59,787   copying bhmm/tests/data/2well_traj_100K.dat -> build/lib.linux-armv7l-3.9/bhmm/tests/data
2021-07-10T11:24:59,797   copying bhmm/tests/data/2well_P.dat -> build/lib.linux-armv7l-3.9/bhmm/tests/data
2021-07-10T11:24:59,809   running build_ext
2021-07-10T11:24:59,816   building 'bhmm.hidden.impl_c.hidden' extension
2021-07-10T11:24:59,817   creating build/temp.linux-armv7l-3.9
2021-07-10T11:24:59,817   creating build/temp.linux-armv7l-3.9/bhmm
2021-07-10T11:24:59,818   creating build/temp.linux-armv7l-3.9/bhmm/hidden
2021-07-10T11:24:59,818   creating build/temp.linux-armv7l-3.9/bhmm/hidden/impl_c
2021-07-10T11:24:59,819   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I./bhmm/hidden/impl_c -I/bhmm/hidden/impl_c/ -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c ./bhmm/hidden/impl_c/_hidden.c -o build/temp.linux-armv7l-3.9/./bhmm/hidden/impl_c/_hidden.o
2021-07-10T11:24:59,979   ./bhmm/hidden/impl_c/_hidden.c: In function ‘_compute_viterbi’:
2021-07-10T11:24:59,980   ./bhmm/hidden/impl_c/_hidden.c:207:26: warning: unused variable ‘p’ [-Wunused-variable]
2021-07-10T11:24:59,980     207 |     double sum, maxprod, p;
2021-07-10T11:24:59,980         |                          ^
2021-07-10T11:24:59,980   ./bhmm/hidden/impl_c/_hidden.c:207:17: warning: unused variable ‘maxprod’ [-Wunused-variable]
2021-07-10T11:24:59,980     207 |     double sum, maxprod, p;
2021-07-10T11:24:59,981         |                 ^~~~~~~
2021-07-10T11:25:00,440   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I./bhmm/hidden/impl_c -I/bhmm/hidden/impl_c/ -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c ./bhmm/hidden/impl_c/hidden.c -o build/temp.linux-armv7l-3.9/./bhmm/hidden/impl_c/hidden.o
2021-07-10T11:25:00,827   In file included from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1969,
2021-07-10T11:25:00,827                    from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2021-07-10T11:25:00,827                    from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
2021-07-10T11:25:00,827                    from ./bhmm/hidden/impl_c/hidden.c:638:
2021-07-10T11:25:00,828   /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2021-07-10T11:25:00,828      17 | #warning "Using deprecated NumPy API, disable it with " \
2021-07-10T11:25:00,828         |  ^~~~~~~
2021-07-10T11:25:07,216   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/./bhmm/hidden/impl_c/_hidden.o build/temp.linux-armv7l-3.9/./bhmm/hidden/impl_c/hidden.o -o build/lib.linux-armv7l-3.9/bhmm/hidden/impl_c/hidden.cpython-39-arm-linux-gnueabihf.so
2021-07-10T11:25:07,363   building 'bhmm.output_models.impl_c.discrete' extension
2021-07-10T11:25:07,363   creating build/temp.linux-armv7l-3.9/bhmm/output_models
2021-07-10T11:25:07,364   creating build/temp.linux-armv7l-3.9/bhmm/output_models/impl_c
2021-07-10T11:25:07,365   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I./bhmm/output_models/impl_c -I/bhmm/output_models/impl_c/ -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c ./bhmm/output_models/impl_c/_discrete.c -o build/temp.linux-armv7l-3.9/./bhmm/output_models/impl_c/_discrete.o
2021-07-10T11:25:07,420   ./bhmm/output_models/impl_c/_discrete.c: In function ‘_update_pout’:
2021-07-10T11:25:07,421   ./bhmm/output_models/impl_c/_discrete.c:22:12: warning: unused variable ‘j’ [-Wunused-variable]
2021-07-10T11:25:07,421      22 |     int i, j, t, o;
2021-07-10T11:25:07,422         |            ^
2021-07-10T11:25:07,477   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I./bhmm/output_models/impl_c -I/bhmm/output_models/impl_c/ -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c ./bhmm/output_models/impl_c/discrete.c -o build/temp.linux-armv7l-3.9/./bhmm/output_models/impl_c/discrete.o
2021-07-10T11:25:07,878   In file included from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1969,
2021-07-10T11:25:07,879                    from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2021-07-10T11:25:07,879                    from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
2021-07-10T11:25:07,879                    from ./bhmm/output_models/impl_c/discrete.c:638:
2021-07-10T11:25:07,879   /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2021-07-10T11:25:07,879      17 | #warning "Using deprecated NumPy API, disable it with " \
2021-07-10T11:25:07,879         |  ^~~~~~~
2021-07-10T11:25:10,519   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/./bhmm/output_models/impl_c/_discrete.o build/temp.linux-armv7l-3.9/./bhmm/output_models/impl_c/discrete.o -o build/lib.linux-armv7l-3.9/bhmm/output_models/impl_c/discrete.cpython-39-arm-linux-gnueabihf.so
2021-07-10T11:25:10,644   building 'bhmm.output_models.impl_c.gaussian' extension
2021-07-10T11:25:10,645   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I./bhmm/output_models/impl_c -I/bhmm/output_models/impl_c/ -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c ./bhmm/output_models/impl_c/_gaussian.c -o build/temp.linux-armv7l-3.9/./bhmm/output_models/impl_c/_gaussian.o
2021-07-10T11:25:10,822   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I./bhmm/output_models/impl_c -I/bhmm/output_models/impl_c/ -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c ./bhmm/output_models/impl_c/gaussian.c -o build/temp.linux-armv7l-3.9/./bhmm/output_models/impl_c/gaussian.o
2021-07-10T11:25:11,210   In file included from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1969,
2021-07-10T11:25:11,210                    from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2021-07-10T11:25:11,211                    from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
2021-07-10T11:25:11,211                    from ./bhmm/output_models/impl_c/gaussian.c:638:
2021-07-10T11:25:11,211   /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2021-07-10T11:25:11,211      17 | #warning "Using deprecated NumPy API, disable it with " \
2021-07-10T11:25:11,211         |  ^~~~~~~
2021-07-10T11:25:16,010   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/./bhmm/output_models/impl_c/_gaussian.o build/temp.linux-armv7l-3.9/./bhmm/output_models/impl_c/gaussian.o -o build/lib.linux-armv7l-3.9/bhmm/output_models/impl_c/gaussian.cpython-39-arm-linux-gnueabihf.so
2021-07-10T11:25:16,152   building 'bhmm._external.clustering.kmeans_clustering' extension
2021-07-10T11:25:16,153   creating build/temp.linux-armv7l-3.9/bhmm/_external
2021-07-10T11:25:16,153   creating build/temp.linux-armv7l-3.9/bhmm/_external/clustering
2021-07-10T11:25:16,153   creating build/temp.linux-armv7l-3.9/bhmm/_external/clustering/src
2021-07-10T11:25:16,154   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I./bhmm/_external/clustering/include -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c ./bhmm/_external/clustering/src/clustering.c -o build/temp.linux-armv7l-3.9/./bhmm/_external/clustering/src/clustering.o -std=c99 -O3
2021-07-10T11:25:16,565   In file included from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1969,
2021-07-10T11:25:16,565                    from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2021-07-10T11:25:16,565                    from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
2021-07-10T11:25:16,566                    from ./bhmm/_external/clustering/include/clustering.h:34,
2021-07-10T11:25:16,566                    from ./bhmm/_external/clustering/src/clustering.c:27:
2021-07-10T11:25:16,566   /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2021-07-10T11:25:16,566      17 | #warning "Using deprecated NumPy API, disable it with " \
2021-07-10T11:25:16,566         |  ^~~~~~~
2021-07-10T11:25:16,767   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I./bhmm/_external/clustering/include -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c ./bhmm/_external/clustering/src/kmeans.c -o build/temp.linux-armv7l-3.9/./bhmm/_external/clustering/src/kmeans.o -std=c99 -O3
2021-07-10T11:25:17,072   In file included from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1969,
2021-07-10T11:25:17,072                    from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2021-07-10T11:25:17,073                    from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
2021-07-10T11:25:17,073                    from ./bhmm/_external/clustering/include/clustering.h:34,
2021-07-10T11:25:17,073                    from ./bhmm/_external/clustering/src/kmeans.c:27:
2021-07-10T11:25:17,073   /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2021-07-10T11:25:17,073      17 | #warning "Using deprecated NumPy API, disable it with " \
2021-07-10T11:25:17,073         |  ^~~~~~~
2021-07-10T11:25:17,097   ./bhmm/_external/clustering/src/kmeans.c: In function ‘cluster’:
2021-07-10T11:25:17,098   ./bhmm/_external/clustering/src/kmeans.c:58:38: warning: variable ‘py_res’ set but not used [-Wunused-but-set-variable]
2021-07-10T11:25:17,098      58 |     PyObject *py_centers, *py_item, *py_res;
2021-07-10T11:25:17,098         |                                      ^~~~~~
2021-07-10T11:25:17,114   At top level:
2021-07-10T11:25:17,115   ./bhmm/_external/clustering/src/kmeans.c:526:1: warning: ‘error_out’ defined but not used [-Wunused-function]
2021-07-10T11:25:17,115     526 | error_out(PyObject *m) {
2021-07-10T11:25:17,115         | ^~~~~~~~~
2021-07-10T11:25:17,229   ./bhmm/_external/clustering/src/kmeans.c: In function ‘cluster’:
2021-07-10T11:25:17,229   ./bhmm/_external/clustering/src/kmeans.c:178:50: warning: ‘closest_center_index’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2021-07-10T11:25:17,229     178 |          new_centers[closest_center_index*dim+j] += chunk[i*dim+j];
2021-07-10T11:25:17,229         |                                                  ^~
2021-07-10T11:25:17,741   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/./bhmm/_external/clustering/src/clustering.o build/temp.linux-armv7l-3.9/./bhmm/_external/clustering/src/kmeans.o -o build/lib.linux-armv7l-3.9/bhmm/_external/clustering/kmeans_clustering.cpython-39-arm-linux-gnueabihf.so
2021-07-10T11:25:17,861   installing to build/bdist.linux-armv7l/wheel
2021-07-10T11:25:17,862   running install
2021-07-10T11:25:17,863   running install_lib
2021-07-10T11:25:17,871   creating build/bdist.linux-armv7l
2021-07-10T11:25:17,871   creating build/bdist.linux-armv7l/wheel
2021-07-10T11:25:17,873   creating build/bdist.linux-armv7l/wheel/bhmm
2021-07-10T11:25:17,875   creating build/bdist.linux-armv7l/wheel/bhmm/tests
2021-07-10T11:25:17,876   copying build/lib.linux-armv7l-3.9/bhmm/tests/test_bhmm.py -> build/bdist.linux-armv7l/wheel/bhmm/tests
2021-07-10T11:25:17,879   copying build/lib.linux-armv7l-3.9/bhmm/tests/test_init.py -> build/bdist.linux-armv7l/wheel/bhmm/tests
2021-07-10T11:25:17,881   copying build/lib.linux-armv7l-3.9/bhmm/tests/benchmark_hidden.py -> build/bdist.linux-armv7l/wheel/bhmm/tests
2021-07-10T11:25:17,884   copying build/lib.linux-armv7l-3.9/bhmm/tests/test_mlhmm.py -> build/bdist.linux-armv7l/wheel/bhmm/tests
2021-07-10T11:25:17,886   copying build/lib.linux-armv7l-3.9/bhmm/tests/test_testsystems.py -> build/bdist.linux-armv7l/wheel/bhmm/tests
2021-07-10T11:25:17,889   creating build/bdist.linux-armv7l/wheel/bhmm/tests/data
2021-07-10T11:25:17,890   copying build/lib.linux-armv7l-3.9/bhmm/tests/data/2well_energy.dat -> build/bdist.linux-armv7l/wheel/bhmm/tests/data
2021-07-10T11:25:17,892   copying build/lib.linux-armv7l-3.9/bhmm/tests/data/2well_traj_100K.dat -> build/bdist.linux-armv7l/wheel/bhmm/tests/data
2021-07-10T11:25:17,905   copying build/lib.linux-armv7l-3.9/bhmm/tests/data/2well_P.dat -> build/bdist.linux-armv7l/wheel/bhmm/tests/data
2021-07-10T11:25:17,907   copying build/lib.linux-armv7l-3.9/bhmm/tests/test_hidden.py -> build/bdist.linux-armv7l/wheel/bhmm/tests
2021-07-10T11:25:17,910   copying build/lib.linux-armv7l-3.9/bhmm/tests/test_hmm.py -> build/bdist.linux-armv7l/wheel/bhmm/tests
2021-07-10T11:25:17,912   copying build/lib.linux-armv7l-3.9/bhmm/tests/__init__.py -> build/bdist.linux-armv7l/wheel/bhmm/tests
2021-07-10T11:25:17,914   copying build/lib.linux-armv7l-3.9/bhmm/tests/test_output_gaussian.py -> build/bdist.linux-armv7l/wheel/bhmm/tests
2021-07-10T11:25:17,916   creating build/bdist.linux-armv7l/wheel/bhmm/hidden
2021-07-10T11:25:17,917   creating build/bdist.linux-armv7l/wheel/bhmm/hidden/impl_python
2021-07-10T11:25:17,918   copying build/lib.linux-armv7l-3.9/bhmm/hidden/impl_python/hidden.py -> build/bdist.linux-armv7l/wheel/bhmm/hidden/impl_python
2021-07-10T11:25:17,921   copying build/lib.linux-armv7l-3.9/bhmm/hidden/impl_python/__init__.py -> build/bdist.linux-armv7l/wheel/bhmm/hidden/impl_python
2021-07-10T11:25:17,923   copying build/lib.linux-armv7l-3.9/bhmm/hidden/api.py -> build/bdist.linux-armv7l/wheel/bhmm/hidden
2021-07-10T11:25:17,926   creating build/bdist.linux-armv7l/wheel/bhmm/hidden/impl_c
2021-07-10T11:25:17,927   copying build/lib.linux-armv7l-3.9/bhmm/hidden/impl_c/hidden.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/bhmm/hidden/impl_c
2021-07-10T11:25:17,943   copying build/lib.linux-armv7l-3.9/bhmm/hidden/impl_c/__init__.py -> build/bdist.linux-armv7l/wheel/bhmm/hidden/impl_c
2021-07-10T11:25:17,945   copying build/lib.linux-armv7l-3.9/bhmm/hidden/__init__.py -> build/bdist.linux-armv7l/wheel/bhmm/hidden
2021-07-10T11:25:17,947   creating build/bdist.linux-armv7l/wheel/bhmm/output_models
2021-07-10T11:25:17,948   copying build/lib.linux-armv7l-3.9/bhmm/output_models/discrete.py -> build/bdist.linux-armv7l/wheel/bhmm/output_models
2021-07-10T11:25:17,951   copying build/lib.linux-armv7l-3.9/bhmm/output_models/gaussian.py -> build/bdist.linux-armv7l/wheel/bhmm/output_models
2021-07-10T11:25:17,954   copying build/lib.linux-armv7l-3.9/bhmm/output_models/outputmodel.py -> build/bdist.linux-armv7l/wheel/bhmm/output_models
2021-07-10T11:25:17,956   creating build/bdist.linux-armv7l/wheel/bhmm/output_models/impl_c
2021-07-10T11:25:17,957   copying build/lib.linux-armv7l-3.9/bhmm/output_models/impl_c/discrete.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/bhmm/output_models/impl_c
2021-07-10T11:25:17,965   copying build/lib.linux-armv7l-3.9/bhmm/output_models/impl_c/gaussian.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/bhmm/output_models/impl_c
2021-07-10T11:25:17,977   copying build/lib.linux-armv7l-3.9/bhmm/output_models/impl_c/__init__.py -> build/bdist.linux-armv7l/wheel/bhmm/output_models/impl_c
2021-07-10T11:25:17,979   copying build/lib.linux-armv7l-3.9/bhmm/output_models/__init__.py -> build/bdist.linux-armv7l/wheel/bhmm/output_models
2021-07-10T11:25:17,982   creating build/bdist.linux-armv7l/wheel/bhmm/hmm
2021-07-10T11:25:17,983   copying build/lib.linux-armv7l-3.9/bhmm/hmm/gaussian_hmm.py -> build/bdist.linux-armv7l/wheel/bhmm/hmm
2021-07-10T11:25:17,985   copying build/lib.linux-armv7l-3.9/bhmm/hmm/discrete_hmm.py -> build/bdist.linux-armv7l/wheel/bhmm/hmm
2021-07-10T11:25:17,987   copying build/lib.linux-armv7l-3.9/bhmm/hmm/generic_sampled_hmm.py -> build/bdist.linux-armv7l/wheel/bhmm/hmm
2021-07-10T11:25:17,990   copying build/lib.linux-armv7l-3.9/bhmm/hmm/generic_hmm.py -> build/bdist.linux-armv7l/wheel/bhmm/hmm
2021-07-10T11:25:17,993   copying build/lib.linux-armv7l-3.9/bhmm/hmm/__init__.py -> build/bdist.linux-armv7l/wheel/bhmm/hmm
2021-07-10T11:25:17,995   copying build/lib.linux-armv7l-3.9/bhmm/api.py -> build/bdist.linux-armv7l/wheel/bhmm
2021-07-10T11:25:17,998   creating build/bdist.linux-armv7l/wheel/bhmm/util
2021-07-10T11:25:17,999   copying build/lib.linux-armv7l-3.9/bhmm/util/logger.py -> build/bdist.linux-armv7l/wheel/bhmm/util
2021-07-10T11:25:18,001   copying build/lib.linux-armv7l-3.9/bhmm/util/config.py -> build/bdist.linux-armv7l/wheel/bhmm/util
2021-07-10T11:25:18,003   copying build/lib.linux-armv7l-3.9/bhmm/util/analysis.py -> build/bdist.linux-armv7l/wheel/bhmm/util
2021-07-10T11:25:18,005   copying build/lib.linux-armv7l-3.9/bhmm/util/types.py -> build/bdist.linux-armv7l/wheel/bhmm/util
2021-07-10T11:25:18,008   copying build/lib.linux-armv7l-3.9/bhmm/util/testsystems.py -> build/bdist.linux-armv7l/wheel/bhmm/util
2021-07-10T11:25:18,010   copying build/lib.linux-armv7l-3.9/bhmm/util/statistics.py -> build/bdist.linux-armv7l/wheel/bhmm/util
2021-07-10T11:25:18,013   copying build/lib.linux-armv7l-3.9/bhmm/util/__init__.py -> build/bdist.linux-armv7l/wheel/bhmm/util
2021-07-10T11:25:18,015   copying build/lib.linux-armv7l-3.9/bhmm/version.py -> build/bdist.linux-armv7l/wheel/bhmm
2021-07-10T11:25:18,017   creating build/bdist.linux-armv7l/wheel/bhmm/_external
2021-07-10T11:25:18,019   creating build/bdist.linux-armv7l/wheel/bhmm/_external/clustering
2021-07-10T11:25:18,020   copying build/lib.linux-armv7l-3.9/bhmm/_external/clustering/kmeans_clustering.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/bhmm/_external/clustering
2021-07-10T11:25:18,025   copying build/lib.linux-armv7l-3.9/bhmm/_external/clustering/__init__.py -> build/bdist.linux-armv7l/wheel/bhmm/_external/clustering
2021-07-10T11:25:18,028   creating build/bdist.linux-armv7l/wheel/bhmm/_external/sklearn
2021-07-10T11:25:18,028   copying build/lib.linux-armv7l-3.9/bhmm/_external/sklearn/base.py -> build/bdist.linux-armv7l/wheel/bhmm/_external/sklearn
2021-07-10T11:25:18,032   creating build/bdist.linux-armv7l/wheel/bhmm/_external/sklearn/mixture
2021-07-10T11:25:18,033   copying build/lib.linux-armv7l-3.9/bhmm/_external/sklearn/mixture/gmm.py -> build/bdist.linux-armv7l/wheel/bhmm/_external/sklearn/mixture
2021-07-10T11:25:18,036   copying build/lib.linux-armv7l-3.9/bhmm/_external/sklearn/mixture/__init__.py -> build/bdist.linux-armv7l/wheel/bhmm/_external/sklearn/mixture
2021-07-10T11:25:18,038   copying build/lib.linux-armv7l-3.9/bhmm/_external/sklearn/utils.py -> build/bdist.linux-armv7l/wheel/bhmm/_external/sklearn
2021-07-10T11:25:18,041   copying build/lib.linux-armv7l-3.9/bhmm/_external/sklearn/__init__.py -> build/bdist.linux-armv7l/wheel/bhmm/_external/sklearn
2021-07-10T11:25:18,042   copying build/lib.linux-armv7l-3.9/bhmm/_external/__init__.py -> build/bdist.linux-armv7l/wheel/bhmm/_external
2021-07-10T11:25:18,044   creating build/bdist.linux-armv7l/wheel/bhmm/init
2021-07-10T11:25:18,045   copying build/lib.linux-armv7l-3.9/bhmm/init/discrete.py -> build/bdist.linux-armv7l/wheel/bhmm/init
2021-07-10T11:25:18,048   copying build/lib.linux-armv7l-3.9/bhmm/init/gaussian.py -> build/bdist.linux-armv7l/wheel/bhmm/init
2021-07-10T11:25:18,049   copying build/lib.linux-armv7l-3.9/bhmm/init/__init__.py -> build/bdist.linux-armv7l/wheel/bhmm/init
2021-07-10T11:25:18,052   creating build/bdist.linux-armv7l/wheel/bhmm/estimators
2021-07-10T11:25:18,053   copying build/lib.linux-armv7l-3.9/bhmm/estimators/maximum_likelihood.py -> build/bdist.linux-armv7l/wheel/bhmm/estimators
2021-07-10T11:25:18,056   copying build/lib.linux-armv7l-3.9/bhmm/estimators/bayesian_sampling.py -> build/bdist.linux-armv7l/wheel/bhmm/estimators
2021-07-10T11:25:18,059   copying build/lib.linux-armv7l-3.9/bhmm/estimators/_tmatrix_disconnected.py -> build/bdist.linux-armv7l/wheel/bhmm/estimators
2021-07-10T11:25:18,061   copying build/lib.linux-armv7l-3.9/bhmm/estimators/__init__.py -> build/bdist.linux-armv7l/wheel/bhmm/estimators
2021-07-10T11:25:18,063   copying build/lib.linux-armv7l-3.9/bhmm/__init__.py -> build/bdist.linux-armv7l/wheel/bhmm
2021-07-10T11:25:18,064   running install_egg_info
2021-07-10T11:25:18,091   running egg_info
2021-07-10T11:25:18,092   writing bhmm.egg-info/PKG-INFO
2021-07-10T11:25:18,094   writing dependency_links to bhmm.egg-info/dependency_links.txt
2021-07-10T11:25:18,096   writing requirements to bhmm.egg-info/requires.txt
2021-07-10T11:25:18,097   writing top-level names to bhmm.egg-info/top_level.txt
2021-07-10T11:25:18,153   reading manifest file 'bhmm.egg-info/SOURCES.txt'
2021-07-10T11:25:18,159   reading manifest template 'MANIFEST.in'
2021-07-10T11:25:18,281   writing manifest file 'bhmm.egg-info/SOURCES.txt'
2021-07-10T11:25:18,283   Copying bhmm.egg-info to build/bdist.linux-armv7l/wheel/bhmm-0.5.3-py3.9.egg-info
2021-07-10T11:25:18,300   running install_scripts
2021-07-10T11:25:18,352   creating build/bdist.linux-armv7l/wheel/bhmm-0.5.3.dist-info/WHEEL
2021-07-10T11:25:18,355   creating '/tmp/pip-wheel-_1hzpqz8/bhmm-0.5.3-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2021-07-10T11:25:18,358   adding 'bhmm/__init__.py'
2021-07-10T11:25:18,360   adding 'bhmm/api.py'
2021-07-10T11:25:18,362   adding 'bhmm/version.py'
2021-07-10T11:25:18,363   adding 'bhmm/_external/__init__.py'
2021-07-10T11:25:18,365   adding 'bhmm/_external/clustering/__init__.py'
2021-07-10T11:25:18,380   adding 'bhmm/_external/clustering/kmeans_clustering.cpython-39-arm-linux-gnueabihf.so'
2021-07-10T11:25:18,382   adding 'bhmm/_external/sklearn/__init__.py'
2021-07-10T11:25:18,384   adding 'bhmm/_external/sklearn/base.py'
2021-07-10T11:25:18,386   adding 'bhmm/_external/sklearn/utils.py'
2021-07-10T11:25:18,388   adding 'bhmm/_external/sklearn/mixture/__init__.py'
2021-07-10T11:25:18,391   adding 'bhmm/_external/sklearn/mixture/gmm.py'
2021-07-10T11:25:18,393   adding 'bhmm/estimators/__init__.py'
2021-07-10T11:25:18,395   adding 'bhmm/estimators/_tmatrix_disconnected.py'
2021-07-10T11:25:18,397   adding 'bhmm/estimators/bayesian_sampling.py'
2021-07-10T11:25:18,399   adding 'bhmm/estimators/maximum_likelihood.py'
2021-07-10T11:25:18,401   adding 'bhmm/hidden/__init__.py'
2021-07-10T11:25:18,403   adding 'bhmm/hidden/api.py'
2021-07-10T11:25:18,405   adding 'bhmm/hidden/impl_c/__init__.py'
2021-07-10T11:25:18,494   adding 'bhmm/hidden/impl_c/hidden.cpython-39-arm-linux-gnueabihf.so'
2021-07-10T11:25:18,500   adding 'bhmm/hidden/impl_python/__init__.py'
2021-07-10T11:25:18,502   adding 'bhmm/hidden/impl_python/hidden.py'
2021-07-10T11:25:18,503   adding 'bhmm/hmm/__init__.py'
2021-07-10T11:25:18,505   adding 'bhmm/hmm/discrete_hmm.py'
2021-07-10T11:25:18,506   adding 'bhmm/hmm/gaussian_hmm.py'
2021-07-10T11:25:18,509   adding 'bhmm/hmm/generic_hmm.py'
2021-07-10T11:25:18,510   adding 'bhmm/hmm/generic_sampled_hmm.py'
2021-07-10T11:25:18,512   adding 'bhmm/init/__init__.py'
2021-07-10T11:25:18,513   adding 'bhmm/init/discrete.py'
2021-07-10T11:25:18,515   adding 'bhmm/init/gaussian.py'
2021-07-10T11:25:18,517   adding 'bhmm/output_models/__init__.py'
2021-07-10T11:25:18,519   adding 'bhmm/output_models/discrete.py'
2021-07-10T11:25:18,522   adding 'bhmm/output_models/gaussian.py'
2021-07-10T11:25:18,524   adding 'bhmm/output_models/outputmodel.py'
2021-07-10T11:25:18,526   adding 'bhmm/output_models/impl_c/__init__.py'
2021-07-10T11:25:18,557   adding 'bhmm/output_models/impl_c/discrete.cpython-39-arm-linux-gnueabihf.so'
2021-07-10T11:25:18,629   adding 'bhmm/output_models/impl_c/gaussian.cpython-39-arm-linux-gnueabihf.so'
2021-07-10T11:25:18,634   adding 'bhmm/tests/__init__.py'
2021-07-10T11:25:18,635   adding 'bhmm/tests/benchmark_hidden.py'
2021-07-10T11:25:18,637   adding 'bhmm/tests/test_bhmm.py'
2021-07-10T11:25:18,638   adding 'bhmm/tests/test_hidden.py'
2021-07-10T11:25:18,640   adding 'bhmm/tests/test_hmm.py'
2021-07-10T11:25:18,641   adding 'bhmm/tests/test_init.py'
2021-07-10T11:25:18,643   adding 'bhmm/tests/test_mlhmm.py'
2021-07-10T11:25:18,644   adding 'bhmm/tests/test_output_gaussian.py'
2021-07-10T11:25:18,645   adding 'bhmm/tests/test_testsystems.py'
2021-07-10T11:25:18,648   adding 'bhmm/tests/data/2well_P.dat'
2021-07-10T11:25:18,649   adding 'bhmm/tests/data/2well_energy.dat'
2021-07-10T11:25:18,727   adding 'bhmm/tests/data/2well_traj_100K.dat'
2021-07-10T11:25:18,731   adding 'bhmm/util/__init__.py'
2021-07-10T11:25:18,733   adding 'bhmm/util/analysis.py'
2021-07-10T11:25:18,734   adding 'bhmm/util/config.py'
2021-07-10T11:25:18,735   adding 'bhmm/util/logger.py'
2021-07-10T11:25:18,737   adding 'bhmm/util/statistics.py'
2021-07-10T11:25:18,739   adding 'bhmm/util/testsystems.py'
2021-07-10T11:25:18,741   adding 'bhmm/util/types.py'
2021-07-10T11:25:18,743   adding 'bhmm-0.5.3.dist-info/METADATA'
2021-07-10T11:25:18,744   adding 'bhmm-0.5.3.dist-info/WHEEL'
2021-07-10T11:25:18,745   adding 'bhmm-0.5.3.dist-info/pbr.json'
2021-07-10T11:25:18,746   adding 'bhmm-0.5.3.dist-info/top_level.txt'
2021-07-10T11:25:18,748   adding 'bhmm-0.5.3.dist-info/RECORD'
2021-07-10T11:25:18,760   removing build/bdist.linux-armv7l/wheel
2021-07-10T11:25:18,931   Building wheel for bhmm (setup.py): finished with status 'done'
2021-07-10T11:25:18,940   Created wheel for bhmm: filename=bhmm-0.5.3-cp39-cp39-linux_armv7l.whl size=525925 sha256=c1af27a33547e53d7864ba10d1a89fd712a119fb74d98b620e6655dc3db5527d
2021-07-10T11:25:18,941   Stored in directory: /tmp/pip-ephem-wheel-cache-xdaahg5s/wheels/e3/07/cf/9ee4f21185774af54737a26491827b1fb3e2a8495a6bdd3f9d
2021-07-10T11:25:18,954 Successfully built bhmm
2021-07-10T11:25:18,979 Removed build tracker: '/tmp/pip-req-tracker-k25_qbjq'