2021-07-10T11:25:35,276 Created temporary directory: /tmp/pip-ephem-wheel-cache-15lacdxw 2021-07-10T11:25:35,279 Created temporary directory: /tmp/pip-req-tracker-w4hr743t 2021-07-10T11:25:35,279 Initialized build tracking at /tmp/pip-req-tracker-w4hr743t 2021-07-10T11:25:35,279 Created build tracker: /tmp/pip-req-tracker-w4hr743t 2021-07-10T11:25:35,280 Entered build tracker: /tmp/pip-req-tracker-w4hr743t 2021-07-10T11:25:35,280 Created temporary directory: /tmp/pip-wheel-5cp5z00r 2021-07-10T11:25:35,309 1 location(s) to search for versions of moira: 2021-07-10T11:25:35,309 * https://pypi.org/simple/moira/ 2021-07-10T11:25:35,309 Fetching project page and analyzing links: https://pypi.org/simple/moira/ 2021-07-10T11:25:35,310 Getting page https://pypi.org/simple/moira/ 2021-07-10T11:25:35,312 Found index url https://pypi.org/simple 2021-07-10T11:25:35,403 Found link https://files.pythonhosted.org/packages/50/c8/214268f5af1be0fadd0b993d96f3b3f5def49c1c9a693a695ab688bcb45c/moira-v1.0.0.tar.gz#sha256=cd1e465608b5d346f1a8b204fd9bb8c1634bf3db9ad3adc89ddafe3c569feb37 (from https://pypi.org/simple/moira/), version: v1.0.0 2021-07-10T11:25:35,403 Found link https://files.pythonhosted.org/packages/94/d3/a532237a3588536bb514272150200dd1e107b138813cfa2cd1bd8ec66876/moira-v1.0.1.tar.gz#sha256=d0b617e57cdea9013dc09b08ab62977cac3ae4268f40dfca663460903f179bd8 (from https://pypi.org/simple/moira/), version: v1.0.1 2021-07-10T11:25:35,404 Found link https://files.pythonhosted.org/packages/92/f5/5af7667b9d4930d27b24597643d88b8c76ce715351ee59be3d1d128cf0ed/moira-v1.0.2b.tar.gz#sha256=c25307bfd838eea95d74f16d4a270be8c63b477b72957123a460b7b79088f34a (from https://pypi.org/simple/moira/), version: v1.0.2b 2021-07-10T11:25:35,404 Found link https://files.pythonhosted.org/packages/fd/42/e43dd8004e8330c625482ac2563222b7e780dd9c951543b7e0d9e20d5482/moira-v1.0.2.tar.gz#sha256=210485455aba232fc7625974ce026ae00e864c4a746739adf24701219f36730d (from https://pypi.org/simple/moira/), version: v1.0.2 2021-07-10T11:25:35,404 Found link https://files.pythonhosted.org/packages/45/82/2488293a6de58d96101ed49993a83cef82ed27b8b94683f0b48b3053d03c/moira-v1.1.0.tar.gz#sha256=284d89790de1de877ef78ab6a3604d57cf3a6c16a8132354986dfa81c38184ca (from https://pypi.org/simple/moira/), version: v1.1.0 2021-07-10T11:25:35,404 Found link https://files.pythonhosted.org/packages/7e/70/3f9ca73321fd8e7403a4673d2f66ce4a31cdc5007b6cf261a2767218dd8c/moira-v1.2.0.tar.gz#sha256=a47396bc7ea1fcda373613a773b8aeacb8f0db55d87a4302ead78f72755fb73d (from https://pypi.org/simple/moira/), version: v1.2.0 2021-07-10T11:25:35,405 Found link https://files.pythonhosted.org/packages/51/3b/500c09bd64d7dcf6e50516e5f91e9b121a4bd0dfbce255c066f77bf7d5de/moira-v1.2.1.tar.gz#sha256=404d6557cfbcaca85b5e6c8d0c2df1094d4bf7f69e9976c5bfb7625d1ad518d1 (from https://pypi.org/simple/moira/), version: v1.2.1 2021-07-10T11:25:35,405 Found link https://files.pythonhosted.org/packages/60/c5/d34cb2fdc1304e5bcd74488164543d51788f9d43a4fb6db89c4dd7397ab5/moira-v1.3.0.tar.gz#sha256=77f68974a17d928449055696632ced9ac56530bcb5abaddd4df88e445d6f497f (from https://pypi.org/simple/moira/), version: v1.3.0 2021-07-10T11:25:35,405 Found link https://files.pythonhosted.org/packages/2d/b0/6e752f6fd0423ed624387c94d5fcabaa6eef234b3cbd12d0db607af477bf/moira-v1.3.2.tar.gz#sha256=6b00b7d0e0e37724fc23ed03bf1ec3d5d2fcf7ec51a769967f729d68b014e00c (from https://pypi.org/simple/moira/), version: v1.3.2 2021-07-10T11:25:35,406 Skipping link: not a file: https://pypi.org/simple/moira/ 2021-07-10T11:25:35,424 Given no hashes to check 1 links for project 'moira': discarding no candidates 2021-07-10T11:25:35,443 Collecting moira==v1.0.2b 2021-07-10T11:25:35,445 Created temporary directory: /tmp/pip-unpack-4l55hj1y 2021-07-10T11:25:35,621 Downloading moira-v1.0.2b.tar.gz (45 kB) 2021-07-10T11:25:35,674 Added moira==v1.0.2b from https://files.pythonhosted.org/packages/92/f5/5af7667b9d4930d27b24597643d88b8c76ce715351ee59be3d1d128cf0ed/moira-v1.0.2b.tar.gz#sha256=c25307bfd838eea95d74f16d4a270be8c63b477b72957123a460b7b79088f34a to build tracker '/tmp/pip-req-tracker-w4hr743t' 2021-07-10T11:25:35,675 Running setup.py (path:/tmp/pip-wheel-5cp5z00r/moira_edfd6d95b410402daa886d11d684ffd1/setup.py) egg_info for package moira 2021-07-10T11:25:35,676 Created temporary directory: /tmp/pip-pip-egg-info-due3jp4x 2021-07-10T11:25:35,676 Running command python setup.py egg_info 2021-07-10T11:25:36,502 /usr/local/lib/python3.9/dist-packages/setuptools/dist.py:484: UserWarning: Normalizing 'v1.0.2b' to '1.0.2b0' 2021-07-10T11:25:36,503 warnings.warn(tmpl.format(**locals())) 2021-07-10T11:25:36,505 /usr/local/lib/python3.9/dist-packages/setuptools/dist.py:697: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead 2021-07-10T11:25:36,505 warnings.warn( 2021-07-10T11:25:36,520 running egg_info 2021-07-10T11:25:36,523 creating /tmp/pip-pip-egg-info-due3jp4x/moira.egg-info 2021-07-10T11:25:36,524 writing /tmp/pip-pip-egg-info-due3jp4x/moira.egg-info/PKG-INFO 2021-07-10T11:25:36,526 writing dependency_links to /tmp/pip-pip-egg-info-due3jp4x/moira.egg-info/dependency_links.txt 2021-07-10T11:25:36,529 writing top-level names to /tmp/pip-pip-egg-info-due3jp4x/moira.egg-info/top_level.txt 2021-07-10T11:25:36,531 writing manifest file '/tmp/pip-pip-egg-info-due3jp4x/moira.egg-info/SOURCES.txt' 2021-07-10T11:25:36,898 reading manifest file '/tmp/pip-pip-egg-info-due3jp4x/moira.egg-info/SOURCES.txt' 2021-07-10T11:25:36,905 writing manifest file '/tmp/pip-pip-egg-info-due3jp4x/moira.egg-info/SOURCES.txt' 2021-07-10T11:25:36,990 Source in /tmp/pip-wheel-5cp5z00r/moira_edfd6d95b410402daa886d11d684ffd1 has version 1.0.2b0, which satisfies requirement moira==v1.0.2b from https://files.pythonhosted.org/packages/92/f5/5af7667b9d4930d27b24597643d88b8c76ce715351ee59be3d1d128cf0ed/moira-v1.0.2b.tar.gz#sha256=c25307bfd838eea95d74f16d4a270be8c63b477b72957123a460b7b79088f34a 2021-07-10T11:25:36,992 Removed moira==v1.0.2b from https://files.pythonhosted.org/packages/92/f5/5af7667b9d4930d27b24597643d88b8c76ce715351ee59be3d1d128cf0ed/moira-v1.0.2b.tar.gz#sha256=c25307bfd838eea95d74f16d4a270be8c63b477b72957123a460b7b79088f34a from build tracker '/tmp/pip-req-tracker-w4hr743t' 2021-07-10T11:25:36,997 Created temporary directory: /tmp/pip-unpack-f_6_ywu6 2021-07-10T11:25:36,997 Building wheels for collected packages: moira 2021-07-10T11:25:37,004 Created temporary directory: /tmp/pip-wheel-j8rqo8gg 2021-07-10T11:25:37,004 Building wheel for moira (setup.py): started 2021-07-10T11:25:37,005 Destination directory: /tmp/pip-wheel-j8rqo8gg 2021-07-10T11:25:37,005 Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-5cp5z00r/moira_edfd6d95b410402daa886d11d684ffd1/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-5cp5z00r/moira_edfd6d95b410402daa886d11d684ffd1/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-j8rqo8gg 2021-07-10T11:25:37,806 /usr/local/lib/python3.9/dist-packages/setuptools/dist.py:484: UserWarning: Normalizing 'v1.0.2b' to '1.0.2b0' 2021-07-10T11:25:37,806 warnings.warn(tmpl.format(**locals())) 2021-07-10T11:25:37,808 /usr/local/lib/python3.9/dist-packages/setuptools/dist.py:697: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead 2021-07-10T11:25:37,808 warnings.warn( 2021-07-10T11:25:37,846 running bdist_wheel 2021-07-10T11:25:38,003 running build 2021-07-10T11:25:38,003 running build_py 2021-07-10T11:25:38,145 creating build 2021-07-10T11:25:38,145 creating build/lib.linux-armv7l-3.9 2021-07-10T11:25:38,146 creating build/lib.linux-armv7l-3.9/moira 2021-07-10T11:25:38,147 copying moira/__init__.py -> build/lib.linux-armv7l-3.9/moira 2021-07-10T11:25:38,148 copying moira/moira.py -> build/lib.linux-armv7l-3.9/moira 2021-07-10T11:25:38,152 running build_ext 2021-07-10T11:25:38,158 building 'bernoulli' extension 2021-07-10T11:25:38,158 creating build/temp.linux-armv7l-3.9 2021-07-10T11:25:38,158 creating build/temp.linux-armv7l-3.9/moira 2021-07-10T11:25:38,159 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.9 -c moira/bernoullimodule.c -o build/temp.linux-armv7l-3.9/moira/bernoullimodule.o 2021-07-10T11:25:38,501 moira/bernoullimodule.c: In function ‘calculate_errors_PB’: 2021-07-10T11:25:38,501 moira/bernoullimodule.c:86:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 2021-07-10T11:25:38,501 86 | if (contig_quals_size != strlen(contig)) 2021-07-10T11:25:38,502 | ^~ 2021-07-10T11:25:38,507 moira/bernoullimodule.c:97:27: warning: implicit declaration of function ‘PyInt_AsLong’; did you mean ‘PyLong_AsLong’? [-Wimplicit-function-declaration] 2021-07-10T11:25:38,507 97 | contig_quals [i] = (int)PyInt_AsLong(intObj); //Since python integers are actually implemented as C long integers. 2021-07-10T11:25:38,507 | ^~~~~~~~~~~~ 2021-07-10T11:25:38,507 | PyLong_AsLong 2021-07-10T11:25:38,513 moira/bernoullimodule.c: In function ‘initbernoulli’: 2021-07-10T11:25:38,514 moira/bernoullimodule.c:124:9: warning: implicit declaration of function ‘Py_InitModule’ [-Wimplicit-function-declaration] 2021-07-10T11:25:38,514 124 | (void) Py_InitModule("bernoulli", module_methods); 2021-07-10T11:25:38,514 | ^~~~~~~~~~~~~ 2021-07-10T11:25:38,515 moira/bernoullimodule.c: In function ‘test’: 2021-07-10T11:25:38,516 moira/bernoullimodule.c:212:6: warning: unused variable ‘j’ [-Wunused-variable] 2021-07-10T11:25:38,517 212 | int j; 2021-07-10T11:25:38,517 | ^ 2021-07-10T11:25:38,520 moira/bernoullimodule.c: In function ‘initbernoulli’: 2021-07-10T11:25:38,520 moira/bernoullimodule.c:125:1: warning: control reaches end of non-void function [-Wreturn-type] 2021-07-10T11:25:38,520 125 | } 2021-07-10T11:25:38,520 | ^ 2021-07-10T11:25:38,522 At top level: 2021-07-10T11:25:38,523 moira/bernoullimodule.c:55:13: warning: ‘module_docstring’ defined but not used [-Wunused-variable] 2021-07-10T11:25:38,523 55 | static char module_docstring[] = "This module provides an interface for calculating the expected errors of a given sequence using a sum of Bernoulli random variables."; 2021-07-10T11:25:38,523 | ^~~~~~~~~~~~~~~~ 2021-07-10T11:25:38,726 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/moira/bernoullimodule.o -o build/lib.linux-armv7l-3.9/bernoulli.cpython-39-arm-linux-gnueabihf.so 2021-07-10T11:25:38,833 building 'nw_align' extension 2021-07-10T11:25:38,833 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.9 -c moira/nw_align.c -o build/temp.linux-armv7l-3.9/moira/nw_align.o 2021-07-10T11:25:39,253 moira/nw_align.c: In function ‘__Pyx_ParseOptionalKeywords’: 2021-07-10T11:25:39,255 moira/nw_align.c:3066:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-10T11:25:39,255 3066 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-10T11:25:39,255 | ^ 2021-07-10T11:25:39,255 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-10T11:25:39,255 from /usr/include/python3.9/Python.h:97, 2021-07-10T11:25:39,255 from moira/nw_align.c:16: 2021-07-10T11:25:39,256 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-10T11:25:39,256 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-10T11:25:39,256 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-10T11:25:39,257 moira/nw_align.c:3066:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-10T11:25:39,257 3066 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-10T11:25:39,257 | ^ 2021-07-10T11:25:39,257 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-10T11:25:39,257 from /usr/include/python3.9/Python.h:97, 2021-07-10T11:25:39,258 from moira/nw_align.c:16: 2021-07-10T11:25:39,258 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-10T11:25:39,258 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-10T11:25:39,258 | ^~~~~~~~~~~~~~~~~~~ 2021-07-10T11:25:39,259 moira/nw_align.c:3066:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-10T11:25:39,259 3066 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-10T11:25:39,259 | ^ 2021-07-10T11:25:39,259 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-10T11:25:39,259 from /usr/include/python3.9/Python.h:97, 2021-07-10T11:25:39,259 from moira/nw_align.c:16: 2021-07-10T11:25:39,259 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-10T11:25:39,260 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-10T11:25:39,260 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-10T11:25:39,261 moira/nw_align.c:3066:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-10T11:25:39,261 3066 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-10T11:25:39,261 | ^ 2021-07-10T11:25:39,261 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-10T11:25:39,261 from /usr/include/python3.9/Python.h:97, 2021-07-10T11:25:39,261 from moira/nw_align.c:16: 2021-07-10T11:25:39,261 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-10T11:25:39,261 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-10T11:25:39,261 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-10T11:25:39,262 moira/nw_align.c:3066:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-10T11:25:39,262 3066 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-10T11:25:39,263 | ^ 2021-07-10T11:25:39,263 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-10T11:25:39,263 from /usr/include/python3.9/Python.h:97, 2021-07-10T11:25:39,263 from moira/nw_align.c:16: 2021-07-10T11:25:39,263 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-10T11:25:39,263 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-10T11:25:39,263 | ^~~~~~~~~~~~~~~~~~~ 2021-07-10T11:25:39,264 moira/nw_align.c:3066:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-10T11:25:39,264 3066 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-10T11:25:39,264 | ^ 2021-07-10T11:25:39,265 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-10T11:25:39,265 from /usr/include/python3.9/Python.h:97, 2021-07-10T11:25:39,265 from moira/nw_align.c:16: 2021-07-10T11:25:39,265 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-10T11:25:39,265 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-10T11:25:39,265 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-10T11:25:39,267 moira/nw_align.c:3082:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-10T11:25:39,267 3082 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-10T11:25:39,267 | ^ 2021-07-10T11:25:39,267 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-10T11:25:39,267 from /usr/include/python3.9/Python.h:97, 2021-07-10T11:25:39,267 from moira/nw_align.c:16: 2021-07-10T11:25:39,267 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-10T11:25:39,268 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-10T11:25:39,268 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-10T11:25:39,268 moira/nw_align.c:3082:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-10T11:25:39,269 3082 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-10T11:25:39,269 | ^ 2021-07-10T11:25:39,269 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-10T11:25:39,269 from /usr/include/python3.9/Python.h:97, 2021-07-10T11:25:39,269 from moira/nw_align.c:16: 2021-07-10T11:25:39,269 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-10T11:25:39,269 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-10T11:25:39,269 | ^~~~~~~~~~~~~~~~~~~ 2021-07-10T11:25:39,270 moira/nw_align.c:3082:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-10T11:25:39,270 3082 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-10T11:25:39,271 | ^ 2021-07-10T11:25:39,271 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-10T11:25:39,271 from /usr/include/python3.9/Python.h:97, 2021-07-10T11:25:39,271 from moira/nw_align.c:16: 2021-07-10T11:25:39,271 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-10T11:25:39,271 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-10T11:25:39,271 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-10T11:25:39,272 moira/nw_align.c:3082:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-10T11:25:39,272 3082 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-10T11:25:39,272 | ^ 2021-07-10T11:25:39,272 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-10T11:25:39,273 from /usr/include/python3.9/Python.h:97, 2021-07-10T11:25:39,273 from moira/nw_align.c:16: 2021-07-10T11:25:39,273 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-10T11:25:39,273 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-10T11:25:39,273 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-10T11:25:39,274 moira/nw_align.c:3082:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-10T11:25:39,274 3082 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-10T11:25:39,274 | ^ 2021-07-10T11:25:39,274 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-10T11:25:39,274 from /usr/include/python3.9/Python.h:97, 2021-07-10T11:25:39,275 from moira/nw_align.c:16: 2021-07-10T11:25:39,275 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-10T11:25:39,275 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-10T11:25:39,275 | ^~~~~~~~~~~~~~~~~~~ 2021-07-10T11:25:39,276 moira/nw_align.c:3082:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-10T11:25:39,276 3082 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-10T11:25:39,276 | ^ 2021-07-10T11:25:39,276 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-10T11:25:39,276 from /usr/include/python3.9/Python.h:97, 2021-07-10T11:25:39,276 from moira/nw_align.c:16: 2021-07-10T11:25:39,276 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-10T11:25:39,277 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-10T11:25:39,277 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-10T11:25:42,135 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/moira/nw_align.o -o build/lib.linux-armv7l-3.9/nw_align.cpython-39-arm-linux-gnueabihf.so 2021-07-10T11:25:42,251 running build_scripts 2021-07-10T11:25:42,251 creating build/scripts-3.9 2021-07-10T11:25:42,252 copying and adjusting moira/moira.py -> build/scripts-3.9 2021-07-10T11:25:42,257 changing mode of build/scripts-3.9/moira.py from 644 to 755 2021-07-10T11:25:42,265 installing to build/bdist.linux-armv7l/wheel 2021-07-10T11:25:42,265 running install 2021-07-10T11:25:42,266 running install_lib 2021-07-10T11:25:42,270 creating build/bdist.linux-armv7l 2021-07-10T11:25:42,271 creating build/bdist.linux-armv7l/wheel 2021-07-10T11:25:42,272 copying build/lib.linux-armv7l-3.9/nw_align.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel 2021-07-10T11:25:42,280 creating build/bdist.linux-armv7l/wheel/moira 2021-07-10T11:25:42,281 copying build/lib.linux-armv7l-3.9/moira/__init__.py -> build/bdist.linux-armv7l/wheel/moira 2021-07-10T11:25:42,282 copying build/lib.linux-armv7l-3.9/moira/moira.py -> build/bdist.linux-armv7l/wheel/moira 2021-07-10T11:25:42,286 copying build/lib.linux-armv7l-3.9/bernoulli.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel 2021-07-10T11:25:42,289 running install_egg_info 2021-07-10T11:25:42,311 running egg_info 2021-07-10T11:25:42,312 creating moira.egg-info 2021-07-10T11:25:42,312 writing moira.egg-info/PKG-INFO 2021-07-10T11:25:42,315 writing dependency_links to moira.egg-info/dependency_links.txt 2021-07-10T11:25:42,317 writing top-level names to moira.egg-info/top_level.txt 2021-07-10T11:25:42,319 writing manifest file 'moira.egg-info/SOURCES.txt' 2021-07-10T11:25:42,323 reading manifest file 'moira.egg-info/SOURCES.txt' 2021-07-10T11:25:42,326 writing manifest file 'moira.egg-info/SOURCES.txt' 2021-07-10T11:25:42,327 Copying moira.egg-info to build/bdist.linux-armv7l/wheel/moira-1.0.2b0-py3.9.egg-info 2021-07-10T11:25:42,336 running install_scripts 2021-07-10T11:25:42,398 creating build/bdist.linux-armv7l/wheel/moira-1.0.2b0.data 2021-07-10T11:25:42,398 creating build/bdist.linux-armv7l/wheel/moira-1.0.2b0.data/scripts 2021-07-10T11:25:42,399 copying build/scripts-3.9/moira.py -> build/bdist.linux-armv7l/wheel/moira-1.0.2b0.data/scripts 2021-07-10T11:25:42,402 changing mode of build/bdist.linux-armv7l/wheel/moira-1.0.2b0.data/scripts/moira.py to 755 2021-07-10T11:25:42,419 creating build/bdist.linux-armv7l/wheel/moira-1.0.2b0.dist-info/WHEEL 2021-07-10T11:25:42,421 creating '/tmp/pip-wheel-j8rqo8gg/moira-1.0.2b0-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2021-07-10T11:25:42,427 adding 'bernoulli.cpython-39-arm-linux-gnueabihf.so' 2021-07-10T11:25:42,470 adding 'nw_align.cpython-39-arm-linux-gnueabihf.so' 2021-07-10T11:25:42,474 adding 'moira/__init__.py' 2021-07-10T11:25:42,481 adding 'moira/moira.py' 2021-07-10T11:25:42,490 adding 'moira-1.0.2b0.data/scripts/moira.py' 2021-07-10T11:25:42,493 adding 'moira-1.0.2b0.dist-info/METADATA' 2021-07-10T11:25:42,494 adding 'moira-1.0.2b0.dist-info/WHEEL' 2021-07-10T11:25:42,495 adding 'moira-1.0.2b0.dist-info/top_level.txt' 2021-07-10T11:25:42,495 adding 'moira-1.0.2b0.dist-info/RECORD' 2021-07-10T11:25:42,498 removing build/bdist.linux-armv7l/wheel 2021-07-10T11:25:42,592 Building wheel for moira (setup.py): finished with status 'done' 2021-07-10T11:25:42,596 Created wheel for moira: filename=moira-1.0.2b0-cp39-cp39-linux_armv7l.whl size=120174 sha256=c11a360aa8a1c2faf5e5d5de88be940e378edaeeba77af314b0e3f960ece7e86 2021-07-10T11:25:42,596 Stored in directory: /tmp/pip-ephem-wheel-cache-15lacdxw/wheels/cd/ab/58/26f901df991aefb8cc66e0c4df81f198a9357448701de84eea 2021-07-10T11:25:42,605 Successfully built moira 2021-07-10T11:25:42,612 Removed build tracker: '/tmp/pip-req-tracker-w4hr743t'