2021-07-10T13:05:38,118 Created temporary directory: /tmp/pip-ephem-wheel-cache-jdwrvars 2021-07-10T13:05:38,121 Created temporary directory: /tmp/pip-req-tracker-i454c_58 2021-07-10T13:05:38,121 Initialized build tracking at /tmp/pip-req-tracker-i454c_58 2021-07-10T13:05:38,121 Created build tracker: /tmp/pip-req-tracker-i454c_58 2021-07-10T13:05:38,122 Entered build tracker: /tmp/pip-req-tracker-i454c_58 2021-07-10T13:05:38,123 Created temporary directory: /tmp/pip-wheel-pyl88dze 2021-07-10T13:05:38,151 1 location(s) to search for versions of moira: 2021-07-10T13:05:38,151 * https://pypi.org/simple/moira/ 2021-07-10T13:05:38,152 Fetching project page and analyzing links: https://pypi.org/simple/moira/ 2021-07-10T13:05:38,152 Getting page https://pypi.org/simple/moira/ 2021-07-10T13:05:38,154 Found index url https://pypi.org/simple 2021-07-10T13:05:38,247 Found link https://files.pythonhosted.org/packages/50/c8/214268f5af1be0fadd0b993d96f3b3f5def49c1c9a693a695ab688bcb45c/moira-v1.0.0.tar.gz#sha256=cd1e465608b5d346f1a8b204fd9bb8c1634bf3db9ad3adc89ddafe3c569feb37 (from https://pypi.org/simple/moira/), version: v1.0.0 2021-07-10T13:05:38,248 Found link https://files.pythonhosted.org/packages/94/d3/a532237a3588536bb514272150200dd1e107b138813cfa2cd1bd8ec66876/moira-v1.0.1.tar.gz#sha256=d0b617e57cdea9013dc09b08ab62977cac3ae4268f40dfca663460903f179bd8 (from https://pypi.org/simple/moira/), version: v1.0.1 2021-07-10T13:05:38,248 Found link https://files.pythonhosted.org/packages/92/f5/5af7667b9d4930d27b24597643d88b8c76ce715351ee59be3d1d128cf0ed/moira-v1.0.2b.tar.gz#sha256=c25307bfd838eea95d74f16d4a270be8c63b477b72957123a460b7b79088f34a (from https://pypi.org/simple/moira/), version: v1.0.2b 2021-07-10T13:05:38,248 Found link https://files.pythonhosted.org/packages/fd/42/e43dd8004e8330c625482ac2563222b7e780dd9c951543b7e0d9e20d5482/moira-v1.0.2.tar.gz#sha256=210485455aba232fc7625974ce026ae00e864c4a746739adf24701219f36730d (from https://pypi.org/simple/moira/), version: v1.0.2 2021-07-10T13:05:38,249 Found link https://files.pythonhosted.org/packages/45/82/2488293a6de58d96101ed49993a83cef82ed27b8b94683f0b48b3053d03c/moira-v1.1.0.tar.gz#sha256=284d89790de1de877ef78ab6a3604d57cf3a6c16a8132354986dfa81c38184ca (from https://pypi.org/simple/moira/), version: v1.1.0 2021-07-10T13:05:38,249 Found link https://files.pythonhosted.org/packages/7e/70/3f9ca73321fd8e7403a4673d2f66ce4a31cdc5007b6cf261a2767218dd8c/moira-v1.2.0.tar.gz#sha256=a47396bc7ea1fcda373613a773b8aeacb8f0db55d87a4302ead78f72755fb73d (from https://pypi.org/simple/moira/), version: v1.2.0 2021-07-10T13:05:38,249 Found link https://files.pythonhosted.org/packages/51/3b/500c09bd64d7dcf6e50516e5f91e9b121a4bd0dfbce255c066f77bf7d5de/moira-v1.2.1.tar.gz#sha256=404d6557cfbcaca85b5e6c8d0c2df1094d4bf7f69e9976c5bfb7625d1ad518d1 (from https://pypi.org/simple/moira/), version: v1.2.1 2021-07-10T13:05:38,250 Found link https://files.pythonhosted.org/packages/60/c5/d34cb2fdc1304e5bcd74488164543d51788f9d43a4fb6db89c4dd7397ab5/moira-v1.3.0.tar.gz#sha256=77f68974a17d928449055696632ced9ac56530bcb5abaddd4df88e445d6f497f (from https://pypi.org/simple/moira/), version: v1.3.0 2021-07-10T13:05:38,250 Found link https://files.pythonhosted.org/packages/2d/b0/6e752f6fd0423ed624387c94d5fcabaa6eef234b3cbd12d0db607af477bf/moira-v1.3.2.tar.gz#sha256=6b00b7d0e0e37724fc23ed03bf1ec3d5d2fcf7ec51a769967f729d68b014e00c (from https://pypi.org/simple/moira/), version: v1.3.2 2021-07-10T13:05:38,250 Skipping link: not a file: https://pypi.org/simple/moira/ 2021-07-10T13:05:38,269 Given no hashes to check 1 links for project 'moira': discarding no candidates 2021-07-10T13:05:38,287 Collecting moira==v1.1.0 2021-07-10T13:05:38,289 Created temporary directory: /tmp/pip-unpack-kh21z1e5 2021-07-10T13:05:38,688 Downloading moira-v1.1.0.tar.gz (616 kB) 2021-07-10T13:05:38,976 Added moira==v1.1.0 from https://files.pythonhosted.org/packages/45/82/2488293a6de58d96101ed49993a83cef82ed27b8b94683f0b48b3053d03c/moira-v1.1.0.tar.gz#sha256=284d89790de1de877ef78ab6a3604d57cf3a6c16a8132354986dfa81c38184ca to build tracker '/tmp/pip-req-tracker-i454c_58' 2021-07-10T13:05:38,977 Running setup.py (path:/tmp/pip-wheel-pyl88dze/moira_fbbf9193045846c2af59750fd40013b5/setup.py) egg_info for package moira 2021-07-10T13:05:38,978 Created temporary directory: /tmp/pip-pip-egg-info-wel3ia4u 2021-07-10T13:05:38,978 Running command python setup.py egg_info 2021-07-10T13:05:39,905 /usr/local/lib/python3.9/dist-packages/setuptools/dist.py:484: UserWarning: Normalizing 'v1.1.0' to '1.1.0' 2021-07-10T13:05:39,906 warnings.warn(tmpl.format(**locals())) 2021-07-10T13:05:39,907 /usr/local/lib/python3.9/dist-packages/setuptools/dist.py:697: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead 2021-07-10T13:05:39,908 warnings.warn( 2021-07-10T13:05:39,922 running egg_info 2021-07-10T13:05:39,924 creating /tmp/pip-pip-egg-info-wel3ia4u/moira.egg-info 2021-07-10T13:05:39,925 writing /tmp/pip-pip-egg-info-wel3ia4u/moira.egg-info/PKG-INFO 2021-07-10T13:05:39,927 writing dependency_links to /tmp/pip-pip-egg-info-wel3ia4u/moira.egg-info/dependency_links.txt 2021-07-10T13:05:39,930 writing top-level names to /tmp/pip-pip-egg-info-wel3ia4u/moira.egg-info/top_level.txt 2021-07-10T13:05:39,931 writing manifest file '/tmp/pip-pip-egg-info-wel3ia4u/moira.egg-info/SOURCES.txt' 2021-07-10T13:05:40,274 reading manifest file '/tmp/pip-pip-egg-info-wel3ia4u/moira.egg-info/SOURCES.txt' 2021-07-10T13:05:40,275 reading manifest template 'MANIFEST.in' 2021-07-10T13:05:40,280 adding license file 'LICENSE' 2021-07-10T13:05:40,284 writing manifest file '/tmp/pip-pip-egg-info-wel3ia4u/moira.egg-info/SOURCES.txt' 2021-07-10T13:05:40,374 Source in /tmp/pip-wheel-pyl88dze/moira_fbbf9193045846c2af59750fd40013b5 has version 1.1.0, which satisfies requirement moira==v1.1.0 from https://files.pythonhosted.org/packages/45/82/2488293a6de58d96101ed49993a83cef82ed27b8b94683f0b48b3053d03c/moira-v1.1.0.tar.gz#sha256=284d89790de1de877ef78ab6a3604d57cf3a6c16a8132354986dfa81c38184ca 2021-07-10T13:05:40,375 Removed moira==v1.1.0 from https://files.pythonhosted.org/packages/45/82/2488293a6de58d96101ed49993a83cef82ed27b8b94683f0b48b3053d03c/moira-v1.1.0.tar.gz#sha256=284d89790de1de877ef78ab6a3604d57cf3a6c16a8132354986dfa81c38184ca from build tracker '/tmp/pip-req-tracker-i454c_58' 2021-07-10T13:05:40,379 Created temporary directory: /tmp/pip-unpack-syjeosxu 2021-07-10T13:05:40,380 Building wheels for collected packages: moira 2021-07-10T13:05:40,384 Created temporary directory: /tmp/pip-wheel-hpmtgolo 2021-07-10T13:05:40,384 Building wheel for moira (setup.py): started 2021-07-10T13:05:40,385 Destination directory: /tmp/pip-wheel-hpmtgolo 2021-07-10T13:05:40,385 Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-pyl88dze/moira_fbbf9193045846c2af59750fd40013b5/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-pyl88dze/moira_fbbf9193045846c2af59750fd40013b5/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-hpmtgolo 2021-07-10T13:05:41,323 /usr/local/lib/python3.9/dist-packages/setuptools/dist.py:484: UserWarning: Normalizing 'v1.1.0' to '1.1.0' 2021-07-10T13:05:41,324 warnings.warn(tmpl.format(**locals())) 2021-07-10T13:05:41,325 /usr/local/lib/python3.9/dist-packages/setuptools/dist.py:697: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead 2021-07-10T13:05:41,325 warnings.warn( 2021-07-10T13:05:41,365 running bdist_wheel 2021-07-10T13:05:41,535 running build 2021-07-10T13:05:41,535 running build_py 2021-07-10T13:05:41,674 creating build 2021-07-10T13:05:41,674 creating build/lib.linux-armv7l-3.9 2021-07-10T13:05:41,675 creating build/lib.linux-armv7l-3.9/moira 2021-07-10T13:05:41,676 copying moira/__init__.py -> build/lib.linux-armv7l-3.9/moira 2021-07-10T13:05:41,677 copying moira/moira.py -> build/lib.linux-armv7l-3.9/moira 2021-07-10T13:05:41,682 running build_ext 2021-07-10T13:05:41,688 building 'bernoulli' extension 2021-07-10T13:05:41,688 creating build/temp.linux-armv7l-3.9 2021-07-10T13:05:41,689 creating build/temp.linux-armv7l-3.9/moira 2021-07-10T13:05:41,689 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.9 -c moira/bernoullimodule.c -o build/temp.linux-armv7l-3.9/moira/bernoullimodule.o 2021-07-10T13:05:42,041 moira/bernoullimodule.c: In function ‘calculate_errors_PB’: 2021-07-10T13:05:42,041 moira/bernoullimodule.c:86:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 2021-07-10T13:05:42,041 86 | if (contig_quals_size != strlen(contig)) 2021-07-10T13:05:42,041 | ^~ 2021-07-10T13:05:42,047 moira/bernoullimodule.c:97:27: warning: implicit declaration of function ‘PyInt_AsLong’; did you mean ‘PyLong_AsLong’? [-Wimplicit-function-declaration] 2021-07-10T13:05:42,047 97 | contig_quals [i] = (int)PyInt_AsLong(intObj); //Since python integers are actually implemented as C long integers. 2021-07-10T13:05:42,047 | ^~~~~~~~~~~~ 2021-07-10T13:05:42,047 | PyLong_AsLong 2021-07-10T13:05:42,054 moira/bernoullimodule.c: In function ‘initbernoulli’: 2021-07-10T13:05:42,054 moira/bernoullimodule.c:124:9: warning: implicit declaration of function ‘Py_InitModule’ [-Wimplicit-function-declaration] 2021-07-10T13:05:42,054 124 | (void) Py_InitModule("bernoulli", module_methods); 2021-07-10T13:05:42,054 | ^~~~~~~~~~~~~ 2021-07-10T13:05:42,056 moira/bernoullimodule.c: In function ‘test’: 2021-07-10T13:05:42,056 moira/bernoullimodule.c:212:6: warning: unused variable ‘j’ [-Wunused-variable] 2021-07-10T13:05:42,057 212 | int j; 2021-07-10T13:05:42,058 | ^ 2021-07-10T13:05:42,060 moira/bernoullimodule.c: In function ‘initbernoulli’: 2021-07-10T13:05:42,060 moira/bernoullimodule.c:125:1: warning: control reaches end of non-void function [-Wreturn-type] 2021-07-10T13:05:42,061 125 | } 2021-07-10T13:05:42,061 | ^ 2021-07-10T13:05:42,063 At top level: 2021-07-10T13:05:42,063 moira/bernoullimodule.c:55:13: warning: ‘module_docstring’ defined but not used [-Wunused-variable] 2021-07-10T13:05:42,064 55 | static char module_docstring[] = "This module provides an interface for calculating the expected errors of a given sequence using a sum of Bernoulli random variables."; 2021-07-10T13:05:42,064 | ^~~~~~~~~~~~~~~~ 2021-07-10T13:05:42,269 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/moira/bernoullimodule.o -o build/lib.linux-armv7l-3.9/bernoulli.cpython-39-arm-linux-gnueabihf.so 2021-07-10T13:05:42,377 building 'nw_align' extension 2021-07-10T13:05:42,378 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.9 -c moira/nw_align.c -o build/temp.linux-armv7l-3.9/moira/nw_align.o 2021-07-10T13:05:42,797 moira/nw_align.c: In function ‘__Pyx_ParseOptionalKeywords’: 2021-07-10T13:05:42,799 moira/nw_align.c:3066:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-10T13:05:42,799 3066 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-10T13:05:42,799 | ^ 2021-07-10T13:05:42,800 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-10T13:05:42,800 from /usr/include/python3.9/Python.h:97, 2021-07-10T13:05:42,800 from moira/nw_align.c:16: 2021-07-10T13:05:42,800 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-10T13:05:42,800 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-10T13:05:42,800 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-10T13:05:42,802 moira/nw_align.c:3066:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-10T13:05:42,802 3066 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-10T13:05:42,802 | ^ 2021-07-10T13:05:42,802 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-10T13:05:42,803 from /usr/include/python3.9/Python.h:97, 2021-07-10T13:05:42,803 from moira/nw_align.c:16: 2021-07-10T13:05:42,803 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-10T13:05:42,803 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-10T13:05:42,803 | ^~~~~~~~~~~~~~~~~~~ 2021-07-10T13:05:42,804 moira/nw_align.c:3066:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-10T13:05:42,805 3066 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-10T13:05:42,805 | ^ 2021-07-10T13:05:42,805 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-10T13:05:42,805 from /usr/include/python3.9/Python.h:97, 2021-07-10T13:05:42,805 from moira/nw_align.c:16: 2021-07-10T13:05:42,805 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-10T13:05:42,805 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-10T13:05:42,805 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-10T13:05:42,807 moira/nw_align.c:3066:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-10T13:05:42,807 3066 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-10T13:05:42,807 | ^ 2021-07-10T13:05:42,807 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-10T13:05:42,807 from /usr/include/python3.9/Python.h:97, 2021-07-10T13:05:42,807 from moira/nw_align.c:16: 2021-07-10T13:05:42,807 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-10T13:05:42,808 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-10T13:05:42,808 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-10T13:05:42,809 moira/nw_align.c:3066:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-10T13:05:42,809 3066 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-10T13:05:42,809 | ^ 2021-07-10T13:05:42,809 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-10T13:05:42,809 from /usr/include/python3.9/Python.h:97, 2021-07-10T13:05:42,810 from moira/nw_align.c:16: 2021-07-10T13:05:42,810 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-10T13:05:42,810 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-10T13:05:42,810 | ^~~~~~~~~~~~~~~~~~~ 2021-07-10T13:05:42,811 moira/nw_align.c:3066:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-10T13:05:42,812 3066 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-10T13:05:42,812 | ^ 2021-07-10T13:05:42,812 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-10T13:05:42,812 from /usr/include/python3.9/Python.h:97, 2021-07-10T13:05:42,812 from moira/nw_align.c:16: 2021-07-10T13:05:42,812 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-10T13:05:42,812 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-10T13:05:42,812 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-10T13:05:42,815 moira/nw_align.c:3082:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-10T13:05:42,815 3082 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-10T13:05:42,815 | ^ 2021-07-10T13:05:42,815 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-10T13:05:42,815 from /usr/include/python3.9/Python.h:97, 2021-07-10T13:05:42,815 from moira/nw_align.c:16: 2021-07-10T13:05:42,815 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-10T13:05:42,815 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-10T13:05:42,815 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-10T13:05:42,817 moira/nw_align.c:3082:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-10T13:05:42,817 3082 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-10T13:05:42,817 | ^ 2021-07-10T13:05:42,817 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-10T13:05:42,817 from /usr/include/python3.9/Python.h:97, 2021-07-10T13:05:42,817 from moira/nw_align.c:16: 2021-07-10T13:05:42,818 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-10T13:05:42,818 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-10T13:05:42,818 | ^~~~~~~~~~~~~~~~~~~ 2021-07-10T13:05:42,819 moira/nw_align.c:3082:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-10T13:05:42,819 3082 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-10T13:05:42,819 | ^ 2021-07-10T13:05:42,820 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-10T13:05:42,820 from /usr/include/python3.9/Python.h:97, 2021-07-10T13:05:42,820 from moira/nw_align.c:16: 2021-07-10T13:05:42,820 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-10T13:05:42,820 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-10T13:05:42,820 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-10T13:05:42,822 moira/nw_align.c:3082:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-10T13:05:42,822 3082 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-10T13:05:42,822 | ^ 2021-07-10T13:05:42,822 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-10T13:05:42,822 from /usr/include/python3.9/Python.h:97, 2021-07-10T13:05:42,822 from moira/nw_align.c:16: 2021-07-10T13:05:42,822 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-10T13:05:42,822 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-10T13:05:42,822 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-10T13:05:42,824 moira/nw_align.c:3082:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-10T13:05:42,824 3082 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-10T13:05:42,824 | ^ 2021-07-10T13:05:42,824 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-10T13:05:42,824 from /usr/include/python3.9/Python.h:97, 2021-07-10T13:05:42,824 from moira/nw_align.c:16: 2021-07-10T13:05:42,825 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-10T13:05:42,825 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-10T13:05:42,825 | ^~~~~~~~~~~~~~~~~~~ 2021-07-10T13:05:42,826 moira/nw_align.c:3082:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-10T13:05:42,826 3082 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-10T13:05:42,826 | ^ 2021-07-10T13:05:42,827 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-10T13:05:42,827 from /usr/include/python3.9/Python.h:97, 2021-07-10T13:05:42,827 from moira/nw_align.c:16: 2021-07-10T13:05:42,827 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-10T13:05:42,827 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-10T13:05:42,827 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-10T13:05:45,728 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/moira/nw_align.o -o build/lib.linux-armv7l-3.9/nw_align.cpython-39-arm-linux-gnueabihf.so 2021-07-10T13:05:45,844 running build_scripts 2021-07-10T13:05:45,845 creating build/scripts-3.9 2021-07-10T13:05:45,846 copying and adjusting moira/moira.py -> build/scripts-3.9 2021-07-10T13:05:45,850 changing mode of build/scripts-3.9/moira.py from 644 to 755 2021-07-10T13:05:45,860 installing to build/bdist.linux-armv7l/wheel 2021-07-10T13:05:45,861 running install 2021-07-10T13:05:45,862 running install_lib 2021-07-10T13:05:45,867 creating build/bdist.linux-armv7l 2021-07-10T13:05:45,867 creating build/bdist.linux-armv7l/wheel 2021-07-10T13:05:45,869 copying build/lib.linux-armv7l-3.9/nw_align.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel 2021-07-10T13:05:45,877 creating build/bdist.linux-armv7l/wheel/moira 2021-07-10T13:05:45,878 copying build/lib.linux-armv7l-3.9/moira/__init__.py -> build/bdist.linux-armv7l/wheel/moira 2021-07-10T13:05:45,880 copying build/lib.linux-armv7l-3.9/moira/moira.py -> build/bdist.linux-armv7l/wheel/moira 2021-07-10T13:05:45,885 copying build/lib.linux-armv7l-3.9/bernoulli.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel 2021-07-10T13:05:45,888 running install_egg_info 2021-07-10T13:05:45,913 running egg_info 2021-07-10T13:05:45,914 creating moira.egg-info 2021-07-10T13:05:45,915 writing moira.egg-info/PKG-INFO 2021-07-10T13:05:45,917 writing dependency_links to moira.egg-info/dependency_links.txt 2021-07-10T13:05:45,919 writing top-level names to moira.egg-info/top_level.txt 2021-07-10T13:05:45,921 writing manifest file 'moira.egg-info/SOURCES.txt' 2021-07-10T13:05:45,948 reading manifest file 'moira.egg-info/SOURCES.txt' 2021-07-10T13:05:45,950 reading manifest template 'MANIFEST.in' 2021-07-10T13:05:45,957 adding license file 'LICENSE' 2021-07-10T13:05:45,961 writing manifest file 'moira.egg-info/SOURCES.txt' 2021-07-10T13:05:45,963 Copying moira.egg-info to build/bdist.linux-armv7l/wheel/moira-1.1.0-py3.9.egg-info 2021-07-10T13:05:45,972 running install_scripts 2021-07-10T13:05:46,035 creating build/bdist.linux-armv7l/wheel/moira-1.1.0.data 2021-07-10T13:05:46,035 creating build/bdist.linux-armv7l/wheel/moira-1.1.0.data/scripts 2021-07-10T13:05:46,036 copying build/scripts-3.9/moira.py -> build/bdist.linux-armv7l/wheel/moira-1.1.0.data/scripts 2021-07-10T13:05:46,040 changing mode of build/bdist.linux-armv7l/wheel/moira-1.1.0.data/scripts/moira.py to 755 2021-07-10T13:05:46,054 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2021-07-10T13:05:46,058 creating build/bdist.linux-armv7l/wheel/moira-1.1.0.dist-info/WHEEL 2021-07-10T13:05:46,060 creating '/tmp/pip-wheel-hpmtgolo/moira-1.1.0-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2021-07-10T13:05:46,067 adding 'bernoulli.cpython-39-arm-linux-gnueabihf.so' 2021-07-10T13:05:46,110 adding 'nw_align.cpython-39-arm-linux-gnueabihf.so' 2021-07-10T13:05:46,114 adding 'moira/__init__.py' 2021-07-10T13:05:46,122 adding 'moira/moira.py' 2021-07-10T13:05:46,132 adding 'moira-1.1.0.data/scripts/moira.py' 2021-07-10T13:05:46,134 adding 'moira-1.1.0.dist-info/LICENSE' 2021-07-10T13:05:46,135 adding 'moira-1.1.0.dist-info/METADATA' 2021-07-10T13:05:46,136 adding 'moira-1.1.0.dist-info/WHEEL' 2021-07-10T13:05:46,137 adding 'moira-1.1.0.dist-info/top_level.txt' 2021-07-10T13:05:46,137 adding 'moira-1.1.0.dist-info/RECORD' 2021-07-10T13:05:46,141 removing build/bdist.linux-armv7l/wheel 2021-07-10T13:05:46,237 Building wheel for moira (setup.py): finished with status 'done' 2021-07-10T13:05:46,241 Created wheel for moira: filename=moira-1.1.0-cp39-cp39-linux_armv7l.whl size=122843 sha256=6564ba8d5a08d16aa769dbaf7a8f188b4df4d7a8ee0b83fb3598cb83a14a2a03 2021-07-10T13:05:46,241 Stored in directory: /tmp/pip-ephem-wheel-cache-jdwrvars/wheels/4a/3b/43/d8db1750040542e84c240a34f182de2d5b845da8fe75af8877 2021-07-10T13:05:46,250 Successfully built moira 2021-07-10T13:05:46,257 Removed build tracker: '/tmp/pip-req-tracker-i454c_58'