2021-07-11T17:26:28,283 DEPRECATION: Python 3.5 reached the end of its life on September 13th, 2020. Please upgrade your Python as Python 3.5 is no longer maintained. pip 21.0 will drop support for Python 3.5 in January 2021. pip 21.0 will remove support for this functionality. 2021-07-11T17:26:28,834 Created temporary directory: /tmp/pip-ephem-wheel-cache-unhmxucj 2021-07-11T17:26:28,838 Created temporary directory: /tmp/pip-req-tracker-u8ff7qzx 2021-07-11T17:26:28,839 Initialized build tracking at /tmp/pip-req-tracker-u8ff7qzx 2021-07-11T17:26:28,839 Created build tracker: /tmp/pip-req-tracker-u8ff7qzx 2021-07-11T17:26:28,839 Entered build tracker: /tmp/pip-req-tracker-u8ff7qzx 2021-07-11T17:26:28,840 Created temporary directory: /tmp/pip-wheel-_rg04h9j 2021-07-11T17:26:28,894 1 location(s) to search for versions of rcsb-utils-seqalign: 2021-07-11T17:26:28,894 * https://pypi.org/simple/rcsb-utils-seqalign/ 2021-07-11T17:26:28,894 Fetching project page and analyzing links: https://pypi.org/simple/rcsb-utils-seqalign/ 2021-07-11T17:26:28,896 Getting page https://pypi.org/simple/rcsb-utils-seqalign/ 2021-07-11T17:26:28,900 Found index url https://pypi.org/simple 2021-07-11T17:26:29,195 Found link https://files.pythonhosted.org/packages/c8/dc/20ee48aa2b8d5b8f7ba02d87a4702ef388ad2c394a4215c83100d4c896c9/rcsb.utils.seqalign-0.11.tar.gz#sha256=1d467855fd6c304f2946bf763f2f0a4b19a4ed95fa044d0412607694ae03756e (from https://pypi.org/simple/rcsb-utils-seqalign/), version: 0.11 2021-07-11T17:26:29,196 Found link https://files.pythonhosted.org/packages/c9/bf/b407af97089162727da9b2ad2871bbdbe45107c9c29c9115bad99bef81ad/rcsb.utils.seqalign-0.12.tar.gz#sha256=43fa21ed04ba740aabfb0ef041ed764fc8eb3524e6a60bdc64d8102e0f088164 (from https://pypi.org/simple/rcsb-utils-seqalign/), version: 0.12 2021-07-11T17:26:29,197 Found link https://files.pythonhosted.org/packages/ba/ee/e9c40273994fc159b3052f1841017bea6688345570f6977b40f842dd771b/rcsb.utils.seqalign-0.13.tar.gz#sha256=30164c3691c515cc3f3699f5ff8aa9bcc3ae442c993c5429e96024676f73b6b9 (from https://pypi.org/simple/rcsb-utils-seqalign/), version: 0.13 2021-07-11T17:26:29,198 Found link https://files.pythonhosted.org/packages/b8/5e/8b841436c6f45b2aebfccdfc731284020c6b41acd51aecc64ffb692b6fb3/rcsb.utils.seqalign-0.14.tar.gz#sha256=5435ee3a0ec96207abb0c027d4b30d507a55ff8a1bf63be33c6ac7bd5eca213c (from https://pypi.org/simple/rcsb-utils-seqalign/), version: 0.14 2021-07-11T17:26:29,198 Found link https://files.pythonhosted.org/packages/c7/6e/f1d99bf9d5c440c2b934974a877d4723ac36aec74475a0c6e3c52960e26d/rcsb.utils.seqalign-0.15.tar.gz#sha256=458262b66bb5be466819c42a675555da1e5e8156c6e965a1e2f21b8ea4f4745f (from https://pypi.org/simple/rcsb-utils-seqalign/), version: 0.15 2021-07-11T17:26:29,199 Found link https://files.pythonhosted.org/packages/79/d7/ecbd243f562aed1033c4a4c94dd1ba02fa8d7ec842d851fc65bf7bfdaf46/rcsb.utils.seqalign-0.17.tar.gz#sha256=d1951d0329408164e64a5084bb1e2db3621b1df64973b7a7e8f5db7ceca351da (from https://pypi.org/simple/rcsb-utils-seqalign/), version: 0.17 2021-07-11T17:26:29,200 Found link https://files.pythonhosted.org/packages/98/aa/ec849950c70868494833ffc665ef630810feaaa266acacc144681bde332b/rcsb.utils.seqalign-0.18.tar.gz#sha256=e96cebf4825f5be972d79f16ddeba4d39d6d899be78a50d12d7da731ec3dbf2e (from https://pypi.org/simple/rcsb-utils-seqalign/), version: 0.18 2021-07-11T17:26:29,201 Found link https://files.pythonhosted.org/packages/fe/34/13d85fee3efba8eb55ecf2d89346adb66e0f1f9df648652aa7ba778e036c/rcsb.utils.seqalign-0.19.tar.gz#sha256=fda962daec584032135049a6f92cdc2386cc545e9e4228b0b2af6a483435c386 (from https://pypi.org/simple/rcsb-utils-seqalign/), version: 0.19 2021-07-11T17:26:29,202 Found link https://files.pythonhosted.org/packages/e5/24/2e485fac2c0eb10c48b2125f74722c70d5e9d74848eed06ea140adfbc32a/rcsb.utils.seqalign-0.20.tar.gz#sha256=6263947f1e88379e6203a25be788e87847c5804672cc41fdc10b404feb15b588 (from https://pypi.org/simple/rcsb-utils-seqalign/), version: 0.20 2021-07-11T17:26:29,202 Found link https://files.pythonhosted.org/packages/ec/5a/d5075f7487653f07d5f325077d356237678dcd36021b53e08d2f5e89b16d/rcsb.utils.seqalign-0.21.tar.gz#sha256=516b39748ad27d15015de8d8fcddd017e830a68b37c1cf05a3074a735af9afdd (from https://pypi.org/simple/rcsb-utils-seqalign/), version: 0.21 2021-07-11T17:26:29,203 Found link https://files.pythonhosted.org/packages/5a/aa/d02365da467b9a1b099f621669851c79d7b2d6b0d0252b3f825ce02440f7/rcsb.utils.seqalign-0.22.tar.gz#sha256=ddef9014f13f9f2ba6c2237e45ad361b318c4ccb319a40fb1d4450bd389f0ad9 (from https://pypi.org/simple/rcsb-utils-seqalign/), version: 0.22 2021-07-11T17:26:29,204 Found link https://files.pythonhosted.org/packages/1b/e1/c07bd19eb9ed86f294f3ca710e9d64de3488e758ffcff19db51837f943a5/rcsb.utils.seqalign-0.23.tar.gz#sha256=cbde32b9c2efb609633b2b9cfad4648e2392d8f6ba3275cbee039aaedcbf148a (from https://pypi.org/simple/rcsb-utils-seqalign/), version: 0.23 2021-07-11T17:26:29,233 Given no hashes to check 1 links for project 'rcsb-utils-seqalign': discarding no candidates 2021-07-11T17:26:29,262 Collecting rcsb-utils-seqalign==0.23 2021-07-11T17:26:29,265 Created temporary directory: /tmp/pip-unpack-40936moy 2021-07-11T17:26:29,473 Downloading rcsb.utils.seqalign-0.23.tar.gz (10 kB) 2021-07-11T17:26:29,567 Added rcsb-utils-seqalign==0.23 from https://files.pythonhosted.org/packages/1b/e1/c07bd19eb9ed86f294f3ca710e9d64de3488e758ffcff19db51837f943a5/rcsb.utils.seqalign-0.23.tar.gz#sha256=cbde32b9c2efb609633b2b9cfad4648e2392d8f6ba3275cbee039aaedcbf148a to build tracker '/tmp/pip-req-tracker-u8ff7qzx' 2021-07-11T17:26:29,569 Running setup.py (path:/tmp/pip-wheel-_rg04h9j/rcsb-utils-seqalign_16e3d63e99a0409fbfbe00dc066e462d/setup.py) egg_info for package rcsb-utils-seqalign 2021-07-11T17:26:29,570 Created temporary directory: /tmp/pip-pip-egg-info-_1f_8r7m 2021-07-11T17:26:29,570 Running command python setup.py egg_info 2021-07-11T17:26:31,549 running egg_info 2021-07-11T17:26:31,554 creating /tmp/pip-pip-egg-info-_1f_8r7m/rcsb.utils.seqalign.egg-info 2021-07-11T17:26:31,556 writing entry points to /tmp/pip-pip-egg-info-_1f_8r7m/rcsb.utils.seqalign.egg-info/entry_points.txt 2021-07-11T17:26:31,558 writing dependency_links to /tmp/pip-pip-egg-info-_1f_8r7m/rcsb.utils.seqalign.egg-info/dependency_links.txt 2021-07-11T17:26:31,560 writing requirements to /tmp/pip-pip-egg-info-_1f_8r7m/rcsb.utils.seqalign.egg-info/requires.txt 2021-07-11T17:26:31,561 writing /tmp/pip-pip-egg-info-_1f_8r7m/rcsb.utils.seqalign.egg-info/PKG-INFO 2021-07-11T17:26:31,566 writing top-level names to /tmp/pip-pip-egg-info-_1f_8r7m/rcsb.utils.seqalign.egg-info/top_level.txt 2021-07-11T17:26:31,569 writing manifest file '/tmp/pip-pip-egg-info-_1f_8r7m/rcsb.utils.seqalign.egg-info/SOURCES.txt' 2021-07-11T17:26:31,877 reading manifest file '/tmp/pip-pip-egg-info-_1f_8r7m/rcsb.utils.seqalign.egg-info/SOURCES.txt' 2021-07-11T17:26:31,879 reading manifest template 'MANIFEST.in' 2021-07-11T17:26:31,885 writing manifest file '/tmp/pip-pip-egg-info-_1f_8r7m/rcsb.utils.seqalign.egg-info/SOURCES.txt' 2021-07-11T17:26:32,008 Source in /tmp/pip-wheel-_rg04h9j/rcsb-utils-seqalign_16e3d63e99a0409fbfbe00dc066e462d has version 0.23, which satisfies requirement rcsb-utils-seqalign==0.23 from https://files.pythonhosted.org/packages/1b/e1/c07bd19eb9ed86f294f3ca710e9d64de3488e758ffcff19db51837f943a5/rcsb.utils.seqalign-0.23.tar.gz#sha256=cbde32b9c2efb609633b2b9cfad4648e2392d8f6ba3275cbee039aaedcbf148a 2021-07-11T17:26:32,009 Removed rcsb-utils-seqalign==0.23 from https://files.pythonhosted.org/packages/1b/e1/c07bd19eb9ed86f294f3ca710e9d64de3488e758ffcff19db51837f943a5/rcsb.utils.seqalign-0.23.tar.gz#sha256=cbde32b9c2efb609633b2b9cfad4648e2392d8f6ba3275cbee039aaedcbf148a from build tracker '/tmp/pip-req-tracker-u8ff7qzx' 2021-07-11T17:26:32,017 Created temporary directory: /tmp/pip-unpack-w20azus7 2021-07-11T17:26:32,018 Building wheels for collected packages: rcsb-utils-seqalign 2021-07-11T17:26:32,023 Created temporary directory: /tmp/pip-wheel-1z7axi20 2021-07-11T17:26:32,024 Building wheel for rcsb-utils-seqalign (setup.py): started 2021-07-11T17:26:32,025 Destination directory: /tmp/pip-wheel-1z7axi20 2021-07-11T17:26:32,025 Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-_rg04h9j/rcsb-utils-seqalign_16e3d63e99a0409fbfbe00dc066e462d/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-_rg04h9j/rcsb-utils-seqalign_16e3d63e99a0409fbfbe00dc066e462d/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-1z7axi20 2021-07-11T17:26:33,882 running bdist_wheel 2021-07-11T17:26:33,895 running build 2021-07-11T17:26:33,896 running build_py 2021-07-11T17:26:34,185 creating build 2021-07-11T17:26:34,185 creating build/lib 2021-07-11T17:26:34,186 creating build/lib/rcsb 2021-07-11T17:26:34,188 copying rcsb/__init__.py -> build/lib/rcsb 2021-07-11T17:26:34,191 creating build/lib/rcsb/utils 2021-07-11T17:26:34,192 copying rcsb/utils/__init__.py -> build/lib/rcsb/utils 2021-07-11T17:26:34,196 creating build/lib/rcsb/utils/seqalign 2021-07-11T17:26:34,197 copying rcsb/utils/seqalign/__init__.py -> build/lib/rcsb/utils/seqalign 2021-07-11T17:26:34,200 copying rcsb/utils/seqalign/MMseqsUtils.py -> build/lib/rcsb/utils/seqalign 2021-07-11T17:26:34,218 installing to build/bdist.linux-armv7l/wheel 2021-07-11T17:26:34,219 running install 2021-07-11T17:26:34,220 running install_lib 2021-07-11T17:26:34,226 creating build/bdist.linux-armv7l 2021-07-11T17:26:34,227 creating build/bdist.linux-armv7l/wheel 2021-07-11T17:26:34,229 creating build/bdist.linux-armv7l/wheel/rcsb 2021-07-11T17:26:34,233 creating build/bdist.linux-armv7l/wheel/rcsb/utils 2021-07-11T17:26:34,235 creating build/bdist.linux-armv7l/wheel/rcsb/utils/seqalign 2021-07-11T17:26:34,236 copying build/lib/rcsb/utils/seqalign/__init__.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/seqalign 2021-07-11T17:26:34,239 copying build/lib/rcsb/utils/seqalign/MMseqsUtils.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/seqalign 2021-07-11T17:26:34,244 copying build/lib/rcsb/utils/__init__.py -> build/bdist.linux-armv7l/wheel/rcsb/utils 2021-07-11T17:26:34,247 copying build/lib/rcsb/__init__.py -> build/bdist.linux-armv7l/wheel/rcsb 2021-07-11T17:26:34,249 running install_egg_info 2021-07-11T17:26:34,285 running egg_info 2021-07-11T17:26:34,286 writing dependency_links to rcsb.utils.seqalign.egg-info/dependency_links.txt 2021-07-11T17:26:34,288 writing top-level names to rcsb.utils.seqalign.egg-info/top_level.txt 2021-07-11T17:26:34,290 writing entry points to rcsb.utils.seqalign.egg-info/entry_points.txt 2021-07-11T17:26:34,291 writing rcsb.utils.seqalign.egg-info/PKG-INFO 2021-07-11T17:26:34,295 writing requirements to rcsb.utils.seqalign.egg-info/requires.txt 2021-07-11T17:26:34,303 reading manifest file 'rcsb.utils.seqalign.egg-info/SOURCES.txt' 2021-07-11T17:26:34,306 reading manifest template 'MANIFEST.in' 2021-07-11T17:26:34,312 writing manifest file 'rcsb.utils.seqalign.egg-info/SOURCES.txt' 2021-07-11T17:26:34,314 Copying rcsb.utils.seqalign.egg-info to build/bdist.linux-armv7l/wheel/rcsb.utils.seqalign-0.23-py3.5.egg-info 2021-07-11T17:26:34,335 running install_scripts 2021-07-11T17:26:34,502 creating build/bdist.linux-armv7l/wheel/rcsb.utils.seqalign-0.23.dist-info/WHEEL 2021-07-11T17:26:34,696 Building wheel for rcsb-utils-seqalign (setup.py): finished with status 'done' 2021-07-11T17:26:34,699 Created wheel for rcsb-utils-seqalign: filename=rcsb.utils.seqalign-0.23-py2.py3-none-any.whl size=9958 sha256=8c821bbe5dc518bed27190c36d7426516824310ed68f446f416effe54c621cfd 2021-07-11T17:26:34,700 Stored in directory: /tmp/pip-ephem-wheel-cache-unhmxucj/wheels/04/16/da/7c0d3f2841647e3a3785b3a00b67e9a27f0861c26579f63fbe 2021-07-11T17:26:34,714 Successfully built rcsb-utils-seqalign 2021-07-11T17:26:34,718 Removed build tracker: '/tmp/pip-req-tracker-u8ff7qzx'