2021-07-11T19:07:46,392 Created temporary directory: /tmp/pip-ephem-wheel-cache-6a649j5z
2021-07-11T19:07:46,395 Created temporary directory: /tmp/pip-req-tracker-awhx8ad4
2021-07-11T19:07:46,396 Initialized build tracking at /tmp/pip-req-tracker-awhx8ad4
2021-07-11T19:07:46,396 Created build tracker: /tmp/pip-req-tracker-awhx8ad4
2021-07-11T19:07:46,396 Entered build tracker: /tmp/pip-req-tracker-awhx8ad4
2021-07-11T19:07:46,397 Created temporary directory: /tmp/pip-wheel-jnzevm7o
2021-07-11T19:07:46,427 1 location(s) to search for versions of automodel-server:
2021-07-11T19:07:46,427 * https://pypi.org/simple/automodel-server/
2021-07-11T19:07:46,427 Fetching project page and analyzing links: https://pypi.org/simple/automodel-server/
2021-07-11T19:07:46,428 Getting page https://pypi.org/simple/automodel-server/
2021-07-11T19:07:46,429 Found index url https://pypi.org/simple
2021-07-11T19:07:46,522   Found link https://files.pythonhosted.org/packages/0f/9b/c6cf333251d716acc3399bc9400798362b9b34daf6e4695cfe6d1a14027d/automodel-server-0.1.1.tar.gz#sha256=0e4db96f204bc1874cd999aec96775c3d2e070cf7a2dc466ef3ff32ab4378195 (from https://pypi.org/simple/automodel-server/), version: 0.1.1
2021-07-11T19:07:46,523   Found link https://files.pythonhosted.org/packages/cf/2b/1fc127f48213ea89a43e1be1b1ccc2b098d076acd7ef170d1058fdae9a53/automodel-server-0.1.2.tar.gz#sha256=c30b387a0e43ce504f7c793a13a57c73a3643b3a4c19f6cfbf23bec9d4d4a731 (from https://pypi.org/simple/automodel-server/), version: 0.1.2
2021-07-11T19:07:46,523   Found link https://files.pythonhosted.org/packages/48/28/6f7518b53df5a6a5b7712b9b259bb297ce52082370f197155f15cde8e563/automodel-server-0.1.3.tar.gz#sha256=3e8979a5abaa1e51fefb4aae023561d845e7fe277696cd16836ce271f5b650cc (from https://pypi.org/simple/automodel-server/), version: 0.1.3
2021-07-11T19:07:46,523   Found link https://files.pythonhosted.org/packages/d8/c5/59bcffd3533ae9a2c89ed42f75f112bd2d044a851782d336b9ccf141b0b6/automodel-server-0.1.4.tar.gz#sha256=7bd7f2c1418fa719715a63dc8438f02921fa546ccf5a24b1fd7ff19ee191e385 (from https://pypi.org/simple/automodel-server/), version: 0.1.4
2021-07-11T19:07:46,524   Found link https://files.pythonhosted.org/packages/9e/3f/b32282837d5127aa62678425b8cc75fa5ed0fe26a23e801d77ffa6c359b3/automodel-server-0.1.5.tar.gz#sha256=21e367f958698e7c0b58aae6b127bba5fc365d24faf1085f9460a26f726b2afd (from https://pypi.org/simple/automodel-server/), version: 0.1.5
2021-07-11T19:07:46,524   Found link https://files.pythonhosted.org/packages/ea/59/cfb16e504fd3e5019575175309d0449907151122f45df50b821695681aa1/automodel-server-0.1.6.tar.gz#sha256=732ff686c5edda63f6fb77232c989745d417f785f4695559639839e91f8484c0 (from https://pypi.org/simple/automodel-server/), version: 0.1.6
2021-07-11T19:07:46,524   Found link https://files.pythonhosted.org/packages/58/e0/e8b0a100b443bb1b401895fc164c3d9f86af71ac9f18fc105f88cdccd048/automodel-server-0.1.7.tar.gz#sha256=19c118489c55e9ad08edbcdf1a28e828db64ca668166f53096865049be94e73c (from https://pypi.org/simple/automodel-server/), version: 0.1.7
2021-07-11T19:07:46,524   Found link https://files.pythonhosted.org/packages/27/2c/b58af74d75b80ac21c838f14d375be44382f6044e3af31f0a2f468053140/automodel-server-0.1.8.tar.gz#sha256=9c3147b9dfa9543dfddffa6589a50578d1776373cd85098d4a1a4e40ae315f58 (from https://pypi.org/simple/automodel-server/), version: 0.1.8
2021-07-11T19:07:46,525   Found link https://files.pythonhosted.org/packages/0d/6f/4e354a315d688efaf2c5a4bf7b28faeedd7c4e2c8339957db784e1f4e5c5/automodel-server-0.1.10.tar.gz#sha256=e5f28d09aca3270b35805707f273ab80ab2add5e2392aa46dcf5ec9044ed6b80 (from https://pypi.org/simple/automodel-server/), version: 0.1.10
2021-07-11T19:07:46,525   Found link https://files.pythonhosted.org/packages/9d/37/2a9fe029b405da92aab4afdcd1fc4ab06164a6dc8afa499b6d79254db2bc/automodel-server-0.1.12.tar.gz#sha256=e2fc0905620cefabd8057d565564f11fc08cb987ec88f9659c8930b5dd6a5eea (from https://pypi.org/simple/automodel-server/), version: 0.1.12
2021-07-11T19:07:46,525   Found link https://files.pythonhosted.org/packages/f1/ac/85842f4860094a5f133e41c94ce8b40b3714f13b1ff51e1efb07078fbd30/automodel-server-0.1.14.tar.gz#sha256=6b0fd005e46db07954ee00bc687613d626a19dfd430e6e66276ca93c0a401021 (from https://pypi.org/simple/automodel-server/), version: 0.1.14
2021-07-11T19:07:46,525   Found link https://files.pythonhosted.org/packages/98/b8/d4bfd4db05c52bf7f8c319a806a97183998844c38fe9718784c93e0924b1/automodel-server-0.1.15.tar.gz#sha256=f69b7fe57c00d1d3d62a6dbd797d294c7ac595bfc3f604a2fbafb214aeedcb13 (from https://pypi.org/simple/automodel-server/), version: 0.1.15
2021-07-11T19:07:46,526   Found link https://files.pythonhosted.org/packages/93/8c/d0f5ffbedf438a538402d45eb20bad789a2f6430865831e88bf085b37330/automodel-server-0.1.16.tar.gz#sha256=ea357cea3b57a7f999ad510bed3dd8f46515e4e6da6ed8f6674b8abadfa750b6 (from https://pypi.org/simple/automodel-server/), version: 0.1.16
2021-07-11T19:07:46,526 Skipping link: not a file: https://pypi.org/simple/automodel-server/
2021-07-11T19:07:46,545 Given no hashes to check 1 links for project 'automodel-server': discarding no candidates
2021-07-11T19:07:46,565 Collecting automodel-server==0.1.8
2021-07-11T19:07:46,566   Created temporary directory: /tmp/pip-unpack-qhk2y_5v
2021-07-11T19:07:46,618   Downloading automodel-server-0.1.8.tar.gz (3.5 MB)
2021-07-11T19:07:47,455   Added automodel-server==0.1.8 from https://files.pythonhosted.org/packages/27/2c/b58af74d75b80ac21c838f14d375be44382f6044e3af31f0a2f468053140/automodel-server-0.1.8.tar.gz#sha256=9c3147b9dfa9543dfddffa6589a50578d1776373cd85098d4a1a4e40ae315f58 to build tracker '/tmp/pip-req-tracker-awhx8ad4'
2021-07-11T19:07:47,456     Running setup.py (path:/tmp/pip-wheel-jnzevm7o/automodel-server_a1062463082343e1ba554e577cc91e26/setup.py) egg_info for package automodel-server
2021-07-11T19:07:47,456     Created temporary directory: /tmp/pip-pip-egg-info-7t13xoj4
2021-07-11T19:07:47,457     Running command python setup.py egg_info
2021-07-11T19:07:48,333     /usr/local/lib/python3.9/dist-packages/setuptools/dist.py:697: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
2021-07-11T19:07:48,334       warnings.warn(
2021-07-11T19:07:48,343     /usr/lib/python3.9/distutils/dist.py:274: UserWarning: Unknown distribution option: 'ext_packages'
2021-07-11T19:07:48,343       warnings.warn(msg)
2021-07-11T19:07:48,459     running egg_info
2021-07-11T19:07:48,461     creating /tmp/pip-pip-egg-info-7t13xoj4/automodel_server.egg-info
2021-07-11T19:07:48,462     writing /tmp/pip-pip-egg-info-7t13xoj4/automodel_server.egg-info/PKG-INFO
2021-07-11T19:07:48,464     writing dependency_links to /tmp/pip-pip-egg-info-7t13xoj4/automodel_server.egg-info/dependency_links.txt
2021-07-11T19:07:48,466     writing requirements to /tmp/pip-pip-egg-info-7t13xoj4/automodel_server.egg-info/requires.txt
2021-07-11T19:07:48,467     writing top-level names to /tmp/pip-pip-egg-info-7t13xoj4/automodel_server.egg-info/top_level.txt
2021-07-11T19:07:48,469     writing manifest file '/tmp/pip-pip-egg-info-7t13xoj4/automodel_server.egg-info/SOURCES.txt'
2021-07-11T19:07:48,801     reading manifest file '/tmp/pip-pip-egg-info-7t13xoj4/automodel_server.egg-info/SOURCES.txt'
2021-07-11T19:07:48,805     writing manifest file '/tmp/pip-pip-egg-info-7t13xoj4/automodel_server.egg-info/SOURCES.txt'
2021-07-11T19:07:48,882   Source in /tmp/pip-wheel-jnzevm7o/automodel-server_a1062463082343e1ba554e577cc91e26 has version 0.1.8, which satisfies requirement automodel-server==0.1.8 from https://files.pythonhosted.org/packages/27/2c/b58af74d75b80ac21c838f14d375be44382f6044e3af31f0a2f468053140/automodel-server-0.1.8.tar.gz#sha256=9c3147b9dfa9543dfddffa6589a50578d1776373cd85098d4a1a4e40ae315f58
2021-07-11T19:07:48,883   Removed automodel-server==0.1.8 from https://files.pythonhosted.org/packages/27/2c/b58af74d75b80ac21c838f14d375be44382f6044e3af31f0a2f468053140/automodel-server-0.1.8.tar.gz#sha256=9c3147b9dfa9543dfddffa6589a50578d1776373cd85098d4a1a4e40ae315f58 from build tracker '/tmp/pip-req-tracker-awhx8ad4'
2021-07-11T19:07:48,888 Created temporary directory: /tmp/pip-unpack-4dt57abk
2021-07-11T19:07:48,889 Building wheels for collected packages: automodel-server
2021-07-11T19:07:48,893   Created temporary directory: /tmp/pip-wheel-6hfhf6ta
2021-07-11T19:07:48,893   Building wheel for automodel-server (setup.py): started
2021-07-11T19:07:48,893   Destination directory: /tmp/pip-wheel-6hfhf6ta
2021-07-11T19:07:48,894   Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-jnzevm7o/automodel-server_a1062463082343e1ba554e577cc91e26/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-jnzevm7o/automodel-server_a1062463082343e1ba554e577cc91e26/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-6hfhf6ta
2021-07-11T19:07:49,743   /usr/local/lib/python3.9/dist-packages/setuptools/dist.py:697: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
2021-07-11T19:07:49,744     warnings.warn(
2021-07-11T19:07:49,752   /usr/lib/python3.9/distutils/dist.py:274: UserWarning: Unknown distribution option: 'ext_packages'
2021-07-11T19:07:49,752     warnings.warn(msg)
2021-07-11T19:07:49,890   running bdist_wheel
2021-07-11T19:07:50,052   running build
2021-07-11T19:07:50,052   running build_py
2021-07-11T19:07:50,192   creating build
2021-07-11T19:07:50,192   creating build/lib.linux-armv7l-3.9
2021-07-11T19:07:50,193   creating build/lib.linux-armv7l-3.9/AutomodelServerModules
2021-07-11T19:07:50,194   copying AutomodelServerModules/AlignFile.py -> build/lib.linux-armv7l-3.9/AutomodelServerModules
2021-07-11T19:07:50,196   copying AutomodelServerModules/pdb.py -> build/lib.linux-armv7l-3.9/AutomodelServerModules
2021-07-11T19:07:50,198   copying AutomodelServerModules/loader2.py -> build/lib.linux-armv7l-3.9/AutomodelServerModules
2021-07-11T19:07:50,200   copying AutomodelServerModules/pdb_test.py -> build/lib.linux-armv7l-3.9/AutomodelServerModules
2021-07-11T19:07:50,202   copying AutomodelServerModules/sequence.py -> build/lib.linux-armv7l-3.9/AutomodelServerModules
2021-07-11T19:07:50,204   copying AutomodelServerModules/AlignmentBuilder.py -> build/lib.linux-armv7l-3.9/AutomodelServerModules
2021-07-11T19:07:50,205   copying AutomodelServerModules/__init__.py -> build/lib.linux-armv7l-3.9/AutomodelServerModules
2021-07-11T19:07:50,207   copying AutomodelServerModules/file.py -> build/lib.linux-armv7l-3.9/AutomodelServerModules
2021-07-11T19:07:50,208   copying AutomodelServerModules/PirFile.py -> build/lib.linux-armv7l-3.9/AutomodelServerModules
2021-07-11T19:07:50,210   copying AutomodelServerModules/PirFormat.py -> build/lib.linux-armv7l-3.9/AutomodelServerModules
2021-07-11T19:07:50,212   copying AutomodelServerModules/fixpdb.py -> build/lib.linux-armv7l-3.9/AutomodelServerModules
2021-07-11T19:07:50,215   creating build/lib.linux-armv7l-3.9/modellerstep
2021-07-11T19:07:50,216   copying modellerstep/RunCommand.py -> build/lib.linux-armv7l-3.9/modellerstep
2021-07-11T19:07:50,218   copying modellerstep/MakeProfile.py -> build/lib.linux-armv7l-3.9/modellerstep
2021-07-11T19:07:50,220   copying modellerstep/Align.py -> build/lib.linux-armv7l-3.9/modellerstep
2021-07-11T19:07:50,223   copying modellerstep/Malign.py -> build/lib.linux-armv7l-3.9/modellerstep
2021-07-11T19:07:50,225   copying modellerstep/GetProt2.py -> build/lib.linux-armv7l-3.9/modellerstep
2021-07-11T19:07:50,227   copying modellerstep/GetProt.py -> build/lib.linux-armv7l-3.9/modellerstep
2021-07-11T19:07:50,229   copying modellerstep/Modeller_Caller.py -> build/lib.linux-armv7l-3.9/modellerstep
2021-07-11T19:07:50,231   copying modellerstep/__init__.py -> build/lib.linux-armv7l-3.9/modellerstep
2021-07-11T19:07:50,232   copying modellerstep/Loop_Refinement.py -> build/lib.linux-armv7l-3.9/modellerstep
2021-07-11T19:07:50,234   copying modellerstep/GetDataFromPDB.py -> build/lib.linux-armv7l-3.9/modellerstep
2021-07-11T19:07:50,236   copying modellerstep/Mold.py -> build/lib.linux-armv7l-3.9/modellerstep
2021-07-11T19:07:50,238   copying modellerstep/Modeller.py -> build/lib.linux-armv7l-3.9/modellerstep
2021-07-11T19:07:50,240   copying modellerstep/Malign2.py -> build/lib.linux-armv7l-3.9/modellerstep
2021-07-11T19:07:50,242   copying modellerstep/Procheck_Evaluate.py -> build/lib.linux-armv7l-3.9/modellerstep
2021-07-11T19:07:50,245   creating build/lib.linux-armv7l-3.9/modellingfile
2021-07-11T19:07:50,246   copying modellingfile/__init__.py -> build/lib.linux-armv7l-3.9/modellingfile
2021-07-11T19:07:50,248   copying modellingfile/PirSequence.py -> build/lib.linux-armv7l-3.9/modellingfile
2021-07-11T19:07:50,250   creating build/lib.linux-armv7l-3.9/tests
2021-07-11T19:07:50,251   copying tests/__init__.py -> build/lib.linux-armv7l-3.9/tests
2021-07-11T19:07:50,257   running build_ext
2021-07-11T19:07:50,263   building 'pdb' extension
2021-07-11T19:07:50,264   error: unknown file type '.bin' (from 'pdb/pdb_95.bin')
2021-07-11T19:07:50,341   Building wheel for automodel-server (setup.py): finished with status 'error'
2021-07-11T19:07:50,342   ERROR: Failed building wheel for automodel-server
2021-07-11T19:07:50,342   Running setup.py clean for automodel-server
2021-07-11T19:07:50,343   Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-jnzevm7o/automodel-server_a1062463082343e1ba554e577cc91e26/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-jnzevm7o/automodel-server_a1062463082343e1ba554e577cc91e26/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' clean --all
2021-07-11T19:07:51,192   /usr/local/lib/python3.9/dist-packages/setuptools/dist.py:697: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
2021-07-11T19:07:51,193     warnings.warn(
2021-07-11T19:07:51,201   /usr/lib/python3.9/distutils/dist.py:274: UserWarning: Unknown distribution option: 'ext_packages'
2021-07-11T19:07:51,202     warnings.warn(msg)
2021-07-11T19:07:51,308   running clean
2021-07-11T19:07:51,310   removing 'build/lib.linux-armv7l-3.9' (and everything under it)
2021-07-11T19:07:51,322   'build/bdist.linux-armv7l' does not exist -- can't clean it
2021-07-11T19:07:51,323   'build/scripts-3.9' does not exist -- can't clean it
2021-07-11T19:07:51,323   removing 'build'
2021-07-11T19:07:51,381 Failed to build automodel-server
2021-07-11T19:07:51,382 ERROR: Failed to build one or more wheels
2021-07-11T19:07:51,382 Exception information:
2021-07-11T19:07:51,382 Traceback (most recent call last):
2021-07-11T19:07:51,382   File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/cli/base_command.py", line 180, in _main
2021-07-11T19:07:51,382     status = self.run(options, args)
2021-07-11T19:07:51,382   File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/cli/req_command.py", line 205, in wrapper
2021-07-11T19:07:51,382     return func(self, options, args)
2021-07-11T19:07:51,382   File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/commands/wheel.py", line 174, in run
2021-07-11T19:07:51,382     raise CommandError(
2021-07-11T19:07:51,382 pip._internal.exceptions.CommandError: Failed to build one or more wheels
2021-07-11T19:07:51,385 Removed build tracker: '/tmp/pip-req-tracker-awhx8ad4'