2021-07-11T21:20:09,024 Created temporary directory: /tmp/pip-ephem-wheel-cache-utnswdxh 2021-07-11T21:20:09,027 Created temporary directory: /tmp/pip-req-tracker-yr06w5dk 2021-07-11T21:20:09,028 Initialized build tracking at /tmp/pip-req-tracker-yr06w5dk 2021-07-11T21:20:09,028 Created build tracker: /tmp/pip-req-tracker-yr06w5dk 2021-07-11T21:20:09,028 Entered build tracker: /tmp/pip-req-tracker-yr06w5dk 2021-07-11T21:20:09,029 Created temporary directory: /tmp/pip-wheel-8ysfpkab 2021-07-11T21:20:09,058 1 location(s) to search for versions of scikit-bio: 2021-07-11T21:20:09,058 * https://pypi.org/simple/scikit-bio/ 2021-07-11T21:20:09,058 Fetching project page and analyzing links: https://pypi.org/simple/scikit-bio/ 2021-07-11T21:20:09,059 Getting page https://pypi.org/simple/scikit-bio/ 2021-07-11T21:20:09,061 Found index url https://pypi.org/simple 2021-07-11T21:20:09,252 Found link https://files.pythonhosted.org/packages/e0/4f/9e53704ce04a5e60511449a5e16511c6e20219ed0932e4aeea84fe2189fd/scikit-bio-0.1.0.tar.gz#sha256=e68193db29015e8f861b7d548f432384aa1741575028ce9a138b39ebee66e1ed (from https://pypi.org/simple/scikit-bio/), version: 0.1.0 2021-07-11T21:20:09,252 Found link https://files.pythonhosted.org/packages/91/8b/ea20137d6b84808b3dd6a7ad162dd80dcda40934428824d1ce87b8983b81/scikit-bio-0.1.1.tar.gz#sha256=f758a5136a211cba16c8e6f1ed250f0fadb27fab436c5b7a73902dbb114618df (from https://pypi.org/simple/scikit-bio/), version: 0.1.1 2021-07-11T21:20:09,253 Found link https://files.pythonhosted.org/packages/5f/6e/adc704fa25e9789bfc17882261010320ea9c6148d9d2e28083a5e57a3e9f/scikit-bio-0.1.2.tar.gz#sha256=bdd9cb68dcc5e3ffc00fa5ae21e9e0f92f1f9c2e5a24a671596bb39d0d3e02a7 (from https://pypi.org/simple/scikit-bio/), version: 0.1.2 2021-07-11T21:20:09,253 Found link https://files.pythonhosted.org/packages/da/03/82ad31dc38265135b432b34b2cec0680fee841e0bdc5f90b5a4596beafb3/scikit-bio-0.1.3.tar.gz#sha256=11af62a5d8302da204c004b16bc625cc055e7322633b289353929ccc4b872e74 (from https://pypi.org/simple/scikit-bio/), version: 0.1.3 2021-07-11T21:20:09,253 Found link https://files.pythonhosted.org/packages/b0/70/92b5bb9fc66ef4d54e1bf67626bda04a41ed723b5eb25c018154728e2b26/scikit-bio-0.1.4.tar.gz#sha256=466d50ced117dafe24f734eb6afd2ec0465caebe5d3e775402582ac77eecc2a8 (from https://pypi.org/simple/scikit-bio/), version: 0.1.4 2021-07-11T21:20:09,254 Found link https://files.pythonhosted.org/packages/5f/21/c6879978a222a04f1ac1b0a535a18111c84367ee22a5c93e6c0503f57e01/scikit-bio-0.1.5.tar.gz#sha256=f136639c66f48d1e83b9799e044c49f0febefa4ead4b4fb7c88ec503147bdb03 (from https://pypi.org/simple/scikit-bio/), version: 0.1.5 2021-07-11T21:20:09,254 Found link https://files.pythonhosted.org/packages/99/76/0c0bd2d6d9973a001477535c68772ff35f543324e36afe21c4f7d6721327/scikit-bio-0.2.0.tar.gz#sha256=348687b973be55505ec7e90c40a21921533d3b5021599705922b8c730cb8c872 (from https://pypi.org/simple/scikit-bio/), version: 0.2.0 2021-07-11T21:20:09,254 Found link https://files.pythonhosted.org/packages/7b/74/77cf9b45ea0df4d3b8c3adcbd6f59e0b0603d1a3a2fed1b1ae6365232ac6/scikit-bio-0.2.1.tar.gz#sha256=adc7a3aa93ca7a3f642531e2cf64778ae243087fd6279d5354fdf157943f41cb (from https://pypi.org/simple/scikit-bio/), version: 0.2.1 2021-07-11T21:20:09,255 Found link https://files.pythonhosted.org/packages/bd/0a/6a5906fd53616c0763c5f445b5dc42907720f344318a1f07627986d22f33/scikit-bio-0.2.2.tar.gz#sha256=6c5fb4b6baec0abde209d33e86e95ff4a776f653a6c3916aa95831eafe03472a (from https://pypi.org/simple/scikit-bio/), version: 0.2.2 2021-07-11T21:20:09,255 Found link https://files.pythonhosted.org/packages/8e/70/559566c9dbde9435360058c420a819b4e8ce844f7ebd94daec9836f4be24/scikit-bio-0.2.3.tar.gz#sha256=5feec63b49249360d2bb55d0163d7066f530d163b5474a3319ec197e7e74c683 (from https://pypi.org/simple/scikit-bio/), version: 0.2.3 2021-07-11T21:20:09,255 Found link https://files.pythonhosted.org/packages/d9/cb/c4684ce5c521de96411c2b88255feb45077e0b2df7ebbdf946abe5caaf25/scikit-bio-0.4.0.tar.gz#sha256=90a3f1ffd9401d8a8f8c1ba8fdd1ea63577fb2063209440d27e8e0834322a1e3 (from https://pypi.org/simple/scikit-bio/), version: 0.4.0 2021-07-11T21:20:09,255 Found link https://files.pythonhosted.org/packages/12/02/81edd2941d892cb4d0144be716c341b9a6fd255046c08d1b7bd6c70a0112/scikit-bio-0.4.1.tar.gz#sha256=66e755b6c7d5b861c7eb63aeb46f4d9afe74ee0ac93c1215e0aa57003e573b0b (from https://pypi.org/simple/scikit-bio/), version: 0.4.1 2021-07-11T21:20:09,256 Found link https://files.pythonhosted.org/packages/a8/87/23635a6a9b6a1abdf78ccfc1e71929570be4c4ab4004eab66da9dd4a5c6a/scikit-bio-0.4.2.tar.gz#sha256=fe33a6cd7e6eb3fd8c088491422e499cfb36fab63c38659b587230f3dd63d91a (from https://pypi.org/simple/scikit-bio/), version: 0.4.2 2021-07-11T21:20:09,256 Found link https://files.pythonhosted.org/packages/95/60/f4c269a6dfaf9d027adba6a81497e5d238cf5e604f53206b4ea50ed1145f/scikit-bio-0.5.0.zip#sha256=482194dd827b86fdf340d1576b07d70f8c62158d471d733fa3e73fe316afaa3a (from https://pypi.org/simple/scikit-bio/), version: 0.5.0 2021-07-11T21:20:09,256 Found link https://files.pythonhosted.org/packages/e5/7e/cf03a7e53da18ae6a847894384838e9a36a98b48909a3f347ff6077c7304/scikit-bio-0.5.1.tar.gz#sha256=2d606f0bbd50df3e5814c10260d0e1a35484ecf141e5e5c809d9c9dbf87a3655 (from https://pypi.org/simple/scikit-bio/), version: 0.5.1 2021-07-11T21:20:09,257 Found link https://files.pythonhosted.org/packages/98/ee/08995b89efccf2bf8a0307a1eb7825dceb199e64a3db24cec832c0ca0baf/scikit-bio-0.5.2.tar.gz#sha256=566c83249d2d338104d106c3a8ba36fa1afeabf10ead8e95b84605b71c65b743 (from https://pypi.org/simple/scikit-bio/), version: 0.5.2 2021-07-11T21:20:09,257 Found link https://files.pythonhosted.org/packages/39/07/4e3bcf7a7c254154ac445684d5f646ccc4a6ce6bfc3b0cc8030136215b8a/scikit-bio-0.5.3.tar.gz#sha256=fbeebe39b0026601fa0f641fdad45abc7c2810fa75d43142f3c5473aff07ff59 (from https://pypi.org/simple/scikit-bio/), version: 0.5.3 2021-07-11T21:20:09,257 Found link https://files.pythonhosted.org/packages/ed/e0/3ae790c5c260be0968a6d41108e35f327365e5460c9d8672714fd136817d/scikit-bio-0.5.4.tar.gz#sha256=3243f1995ef24643c09ff4d9391a79528aadd8232e5aa5d66c38d7b2e0c92f24 (from https://pypi.org/simple/scikit-bio/), version: 0.5.4 2021-07-11T21:20:09,257 Found link https://files.pythonhosted.org/packages/2d/ff/3a909ae8c212305846f7e87f86f3902408b55b958eccedf5d4349e76c671/scikit-bio-0.5.5.tar.gz#sha256=9fa813be66e88a994f7b7a68b8ba2216e205c525caa8585386ebdeebed6428df (from https://pypi.org/simple/scikit-bio/), version: 0.5.5 2021-07-11T21:20:09,258 Found link https://files.pythonhosted.org/packages/66/b0/054ef21e024d24422882958072973cd192b492e004a3ce4e9614ef173d9b/scikit-bio-0.5.6.tar.gz#sha256=48b73ec53ce0ff2c2e3e05f3cfcf93527c1525a8d3e9dd4ae317b4219c37f0ea (from https://pypi.org/simple/scikit-bio/), version: 0.5.6 2021-07-11T21:20:09,258 Skipping link: not a file: https://pypi.org/simple/scikit-bio/ 2021-07-11T21:20:09,278 Given no hashes to check 1 links for project 'scikit-bio': discarding no candidates 2021-07-11T21:20:09,298 Collecting scikit-bio==0.5.1 2021-07-11T21:20:09,300 Created temporary directory: /tmp/pip-unpack-jt16mql7 2021-07-11T21:20:09,339 Downloading scikit-bio-0.5.1.tar.gz (8.2 MB) 2021-07-11T21:20:12,007 Added scikit-bio==0.5.1 from https://files.pythonhosted.org/packages/e5/7e/cf03a7e53da18ae6a847894384838e9a36a98b48909a3f347ff6077c7304/scikit-bio-0.5.1.tar.gz#sha256=2d606f0bbd50df3e5814c10260d0e1a35484ecf141e5e5c809d9c9dbf87a3655 to build tracker '/tmp/pip-req-tracker-yr06w5dk' 2021-07-11T21:20:12,008 Running setup.py (path:/tmp/pip-wheel-8ysfpkab/scikit-bio_c1e8119acaf542c19ef892551d157c50/setup.py) egg_info for package scikit-bio 2021-07-11T21:20:12,009 Created temporary directory: /tmp/pip-pip-egg-info-bf_t0sqi 2021-07-11T21:20:12,009 Running command python setup.py egg_info 2021-07-11T21:20:13,271 running egg_info 2021-07-11T21:20:13,273 creating /tmp/pip-pip-egg-info-bf_t0sqi/scikit_bio.egg-info 2021-07-11T21:20:13,274 writing /tmp/pip-pip-egg-info-bf_t0sqi/scikit_bio.egg-info/PKG-INFO 2021-07-11T21:20:13,277 writing dependency_links to /tmp/pip-pip-egg-info-bf_t0sqi/scikit_bio.egg-info/dependency_links.txt 2021-07-11T21:20:13,279 writing requirements to /tmp/pip-pip-egg-info-bf_t0sqi/scikit_bio.egg-info/requires.txt 2021-07-11T21:20:13,280 writing top-level names to /tmp/pip-pip-egg-info-bf_t0sqi/scikit_bio.egg-info/top_level.txt 2021-07-11T21:20:13,282 writing manifest file '/tmp/pip-pip-egg-info-bf_t0sqi/scikit_bio.egg-info/SOURCES.txt' 2021-07-11T21:20:13,724 reading manifest file '/tmp/pip-pip-egg-info-bf_t0sqi/scikit_bio.egg-info/SOURCES.txt' 2021-07-11T21:20:13,725 reading manifest template 'MANIFEST.in' 2021-07-11T21:20:13,776 no previously-included directories found matching 'doc/build' 2021-07-11T21:20:13,778 no previously-included directories found matching 'doc/source/generated' 2021-07-11T21:20:13,781 warning: no previously-included files matching '*.pyc' found anywhere in distribution 2021-07-11T21:20:13,785 warning: no previously-included files matching '*.pyo' found anywhere in distribution 2021-07-11T21:20:13,788 warning: no previously-included files matching '*.so' found anywhere in distribution 2021-07-11T21:20:13,791 warning: no previously-included files matching '.*.swp' found anywhere in distribution 2021-07-11T21:20:13,791 adding license file 'COPYING.txt' 2021-07-11T21:20:13,825 writing manifest file '/tmp/pip-pip-egg-info-bf_t0sqi/scikit_bio.egg-info/SOURCES.txt' 2021-07-11T21:20:13,933 Source in /tmp/pip-wheel-8ysfpkab/scikit-bio_c1e8119acaf542c19ef892551d157c50 has version 0.5.1, which satisfies requirement scikit-bio==0.5.1 from https://files.pythonhosted.org/packages/e5/7e/cf03a7e53da18ae6a847894384838e9a36a98b48909a3f347ff6077c7304/scikit-bio-0.5.1.tar.gz#sha256=2d606f0bbd50df3e5814c10260d0e1a35484ecf141e5e5c809d9c9dbf87a3655 2021-07-11T21:20:13,934 Removed scikit-bio==0.5.1 from https://files.pythonhosted.org/packages/e5/7e/cf03a7e53da18ae6a847894384838e9a36a98b48909a3f347ff6077c7304/scikit-bio-0.5.1.tar.gz#sha256=2d606f0bbd50df3e5814c10260d0e1a35484ecf141e5e5c809d9c9dbf87a3655 from build tracker '/tmp/pip-req-tracker-yr06w5dk' 2021-07-11T21:20:13,939 Created temporary directory: /tmp/pip-unpack-a_3xnrq1 2021-07-11T21:20:13,939 Building wheels for collected packages: scikit-bio 2021-07-11T21:20:13,943 Created temporary directory: /tmp/pip-wheel-o2drivk9 2021-07-11T21:20:13,944 Building wheel for scikit-bio (setup.py): started 2021-07-11T21:20:13,944 Destination directory: /tmp/pip-wheel-o2drivk9 2021-07-11T21:20:13,945 Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-8ysfpkab/scikit-bio_c1e8119acaf542c19ef892551d157c50/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-8ysfpkab/scikit-bio_c1e8119acaf542c19ef892551d157c50/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-o2drivk9 2021-07-11T21:20:15,222 running bdist_wheel 2021-07-11T21:20:15,415 running build 2021-07-11T21:20:15,415 running build_py 2021-07-11T21:20:15,551 creating build 2021-07-11T21:20:15,551 creating build/lib.linux-armv7l-3.9 2021-07-11T21:20:15,552 creating build/lib.linux-armv7l-3.9/skbio 2021-07-11T21:20:15,553 copying skbio/_base.py -> build/lib.linux-armv7l-3.9/skbio 2021-07-11T21:20:15,555 copying skbio/workflow.py -> build/lib.linux-armv7l-3.9/skbio 2021-07-11T21:20:15,558 copying skbio/__init__.py -> build/lib.linux-armv7l-3.9/skbio 2021-07-11T21:20:15,559 copying skbio/test.py -> build/lib.linux-armv7l-3.9/skbio 2021-07-11T21:20:15,561 creating build/lib.linux-armv7l-3.9/benchmarks 2021-07-11T21:20:15,562 copying benchmarks/__init__.py -> build/lib.linux-armv7l-3.9/benchmarks 2021-07-11T21:20:15,564 copying benchmarks/benchmarks.py -> build/lib.linux-armv7l-3.9/benchmarks 2021-07-11T21:20:15,566 creating build/lib.linux-armv7l-3.9/skbio/diversity 2021-07-11T21:20:15,567 copying skbio/diversity/_block.py -> build/lib.linux-armv7l-3.9/skbio/diversity 2021-07-11T21:20:15,569 copying skbio/diversity/_util.py -> build/lib.linux-armv7l-3.9/skbio/diversity 2021-07-11T21:20:15,571 copying skbio/diversity/__init__.py -> build/lib.linux-armv7l-3.9/skbio/diversity 2021-07-11T21:20:15,574 copying skbio/diversity/_driver.py -> build/lib.linux-armv7l-3.9/skbio/diversity 2021-07-11T21:20:15,578 creating build/lib.linux-armv7l-3.9/skbio/tests 2021-07-11T21:20:15,579 copying skbio/tests/test_base.py -> build/lib.linux-armv7l-3.9/skbio/tests 2021-07-11T21:20:15,581 copying skbio/tests/__init__.py -> build/lib.linux-armv7l-3.9/skbio/tests 2021-07-11T21:20:15,583 copying skbio/tests/test_workflow.py -> build/lib.linux-armv7l-3.9/skbio/tests 2021-07-11T21:20:15,587 creating build/lib.linux-armv7l-3.9/skbio/sequence 2021-07-11T21:20:15,588 copying skbio/sequence/_rna.py -> build/lib.linux-armv7l-3.9/skbio/sequence 2021-07-11T21:20:15,591 copying skbio/sequence/_repr.py -> build/lib.linux-armv7l-3.9/skbio/sequence 2021-07-11T21:20:15,593 copying skbio/sequence/_genetic_code.py -> build/lib.linux-armv7l-3.9/skbio/sequence 2021-07-11T21:20:15,596 copying skbio/sequence/_sequence.py -> build/lib.linux-armv7l-3.9/skbio/sequence 2021-07-11T21:20:15,600 copying skbio/sequence/_grammared_sequence.py -> build/lib.linux-armv7l-3.9/skbio/sequence 2021-07-11T21:20:15,603 copying skbio/sequence/distance.py -> build/lib.linux-armv7l-3.9/skbio/sequence 2021-07-11T21:20:15,605 copying skbio/sequence/_protein.py -> build/lib.linux-armv7l-3.9/skbio/sequence 2021-07-11T21:20:15,607 copying skbio/sequence/_dna.py -> build/lib.linux-armv7l-3.9/skbio/sequence 2021-07-11T21:20:15,610 copying skbio/sequence/__init__.py -> build/lib.linux-armv7l-3.9/skbio/sequence 2021-07-11T21:20:15,612 copying skbio/sequence/_nucleotide_mixin.py -> build/lib.linux-armv7l-3.9/skbio/sequence 2021-07-11T21:20:15,616 creating build/lib.linux-armv7l-3.9/skbio/alignment 2021-07-11T21:20:15,616 copying skbio/alignment/_repr.py -> build/lib.linux-armv7l-3.9/skbio/alignment 2021-07-11T21:20:15,618 copying skbio/alignment/_indexing.py -> build/lib.linux-armv7l-3.9/skbio/alignment 2021-07-11T21:20:15,621 copying skbio/alignment/_pairwise.py -> build/lib.linux-armv7l-3.9/skbio/alignment 2021-07-11T21:20:15,624 copying skbio/alignment/__init__.py -> build/lib.linux-armv7l-3.9/skbio/alignment 2021-07-11T21:20:15,627 copying skbio/alignment/_tabular_msa.py -> build/lib.linux-armv7l-3.9/skbio/alignment 2021-07-11T21:20:15,633 creating build/lib.linux-armv7l-3.9/skbio/io 2021-07-11T21:20:15,633 copying skbio/io/registry.py -> build/lib.linux-armv7l-3.9/skbio/io 2021-07-11T21:20:15,637 copying skbio/io/_exception.py -> build/lib.linux-armv7l-3.9/skbio/io 2021-07-11T21:20:15,639 copying skbio/io/_warning.py -> build/lib.linux-armv7l-3.9/skbio/io 2021-07-11T21:20:15,641 copying skbio/io/__init__.py -> build/lib.linux-armv7l-3.9/skbio/io 2021-07-11T21:20:15,643 copying skbio/io/util.py -> build/lib.linux-armv7l-3.9/skbio/io 2021-07-11T21:20:15,645 copying skbio/io/_fileobject.py -> build/lib.linux-armv7l-3.9/skbio/io 2021-07-11T21:20:15,647 copying skbio/io/_iosources.py -> build/lib.linux-armv7l-3.9/skbio/io 2021-07-11T21:20:15,650 creating build/lib.linux-armv7l-3.9/skbio/metadata 2021-07-11T21:20:15,651 copying skbio/metadata/_interval.py -> build/lib.linux-armv7l-3.9/skbio/metadata 2021-07-11T21:20:15,654 copying skbio/metadata/_repr.py -> build/lib.linux-armv7l-3.9/skbio/metadata 2021-07-11T21:20:15,657 copying skbio/metadata/_mixin.py -> build/lib.linux-armv7l-3.9/skbio/metadata 2021-07-11T21:20:15,659 copying skbio/metadata/__init__.py -> build/lib.linux-armv7l-3.9/skbio/metadata 2021-07-11T21:20:15,661 copying skbio/metadata/_testing.py -> build/lib.linux-armv7l-3.9/skbio/metadata 2021-07-11T21:20:15,665 creating build/lib.linux-armv7l-3.9/skbio/tree 2021-07-11T21:20:15,666 copying skbio/tree/_tree.py -> build/lib.linux-armv7l-3.9/skbio/tree 2021-07-11T21:20:15,671 copying skbio/tree/_exception.py -> build/lib.linux-armv7l-3.9/skbio/tree 2021-07-11T21:20:15,672 copying skbio/tree/__init__.py -> build/lib.linux-armv7l-3.9/skbio/tree 2021-07-11T21:20:15,675 copying skbio/tree/_nj.py -> build/lib.linux-armv7l-3.9/skbio/tree 2021-07-11T21:20:15,677 copying skbio/tree/_majority_rule.py -> build/lib.linux-armv7l-3.9/skbio/tree 2021-07-11T21:20:15,680 creating build/lib.linux-armv7l-3.9/skbio/stats 2021-07-11T21:20:15,681 copying skbio/stats/_subsample.py -> build/lib.linux-armv7l-3.9/skbio/stats 2021-07-11T21:20:15,684 copying skbio/stats/_misc.py -> build/lib.linux-armv7l-3.9/skbio/stats 2021-07-11T21:20:15,685 copying skbio/stats/__init__.py -> build/lib.linux-armv7l-3.9/skbio/stats 2021-07-11T21:20:15,687 copying skbio/stats/power.py -> build/lib.linux-armv7l-3.9/skbio/stats 2021-07-11T21:20:15,691 copying skbio/stats/composition.py -> build/lib.linux-armv7l-3.9/skbio/stats 2021-07-11T21:20:15,694 copying skbio/stats/gradient.py -> build/lib.linux-armv7l-3.9/skbio/stats 2021-07-11T21:20:15,698 creating build/lib.linux-armv7l-3.9/skbio/util 2021-07-11T21:20:15,699 copying skbio/util/_decorator.py -> build/lib.linux-armv7l-3.9/skbio/util 2021-07-11T21:20:15,702 copying skbio/util/_exception.py -> build/lib.linux-armv7l-3.9/skbio/util 2021-07-11T21:20:15,704 copying skbio/util/_misc.py -> build/lib.linux-armv7l-3.9/skbio/util 2021-07-11T21:20:15,706 copying skbio/util/_warning.py -> build/lib.linux-armv7l-3.9/skbio/util 2021-07-11T21:20:15,708 copying skbio/util/__init__.py -> build/lib.linux-armv7l-3.9/skbio/util 2021-07-11T21:20:15,710 copying skbio/util/_testing.py -> build/lib.linux-armv7l-3.9/skbio/util 2021-07-11T21:20:15,714 creating build/lib.linux-armv7l-3.9/skbio/diversity/tests 2021-07-11T21:20:15,714 copying skbio/diversity/tests/test_block.py -> build/lib.linux-armv7l-3.9/skbio/diversity/tests 2021-07-11T21:20:15,717 copying skbio/diversity/tests/__init__.py -> build/lib.linux-armv7l-3.9/skbio/diversity/tests 2021-07-11T21:20:15,719 copying skbio/diversity/tests/test_driver.py -> build/lib.linux-armv7l-3.9/skbio/diversity/tests 2021-07-11T21:20:15,722 copying skbio/diversity/tests/test_util.py -> build/lib.linux-armv7l-3.9/skbio/diversity/tests 2021-07-11T21:20:15,726 creating build/lib.linux-armv7l-3.9/skbio/diversity/alpha 2021-07-11T21:20:15,726 copying skbio/diversity/alpha/_base.py -> build/lib.linux-armv7l-3.9/skbio/diversity/alpha 2021-07-11T21:20:15,729 copying skbio/diversity/alpha/_ace.py -> build/lib.linux-armv7l-3.9/skbio/diversity/alpha 2021-07-11T21:20:15,731 copying skbio/diversity/alpha/_faith_pd.py -> build/lib.linux-armv7l-3.9/skbio/diversity/alpha 2021-07-11T21:20:15,733 copying skbio/diversity/alpha/_lladser.py -> build/lib.linux-armv7l-3.9/skbio/diversity/alpha 2021-07-11T21:20:15,736 copying skbio/diversity/alpha/_chao1.py -> build/lib.linux-armv7l-3.9/skbio/diversity/alpha 2021-07-11T21:20:15,738 copying skbio/diversity/alpha/__init__.py -> build/lib.linux-armv7l-3.9/skbio/diversity/alpha 2021-07-11T21:20:15,740 copying skbio/diversity/alpha/_gini.py -> build/lib.linux-armv7l-3.9/skbio/diversity/alpha 2021-07-11T21:20:15,743 creating build/lib.linux-armv7l-3.9/skbio/diversity/beta 2021-07-11T21:20:15,744 copying skbio/diversity/beta/__init__.py -> build/lib.linux-armv7l-3.9/skbio/diversity/beta 2021-07-11T21:20:15,745 copying skbio/diversity/beta/_unifrac.py -> build/lib.linux-armv7l-3.9/skbio/diversity/beta 2021-07-11T21:20:15,749 creating build/lib.linux-armv7l-3.9/skbio/diversity/alpha/tests 2021-07-11T21:20:15,750 copying skbio/diversity/alpha/tests/test_base.py -> build/lib.linux-armv7l-3.9/skbio/diversity/alpha/tests 2021-07-11T21:20:15,753 copying skbio/diversity/alpha/tests/test_chao1.py -> build/lib.linux-armv7l-3.9/skbio/diversity/alpha/tests 2021-07-11T21:20:15,754 copying skbio/diversity/alpha/tests/test_faith_pd.py -> build/lib.linux-armv7l-3.9/skbio/diversity/alpha/tests 2021-07-11T21:20:15,757 copying skbio/diversity/alpha/tests/__init__.py -> build/lib.linux-armv7l-3.9/skbio/diversity/alpha/tests 2021-07-11T21:20:15,758 copying skbio/diversity/alpha/tests/test_gini.py -> build/lib.linux-armv7l-3.9/skbio/diversity/alpha/tests 2021-07-11T21:20:15,760 copying skbio/diversity/alpha/tests/test_lladser.py -> build/lib.linux-armv7l-3.9/skbio/diversity/alpha/tests 2021-07-11T21:20:15,762 copying skbio/diversity/alpha/tests/test_ace.py -> build/lib.linux-armv7l-3.9/skbio/diversity/alpha/tests 2021-07-11T21:20:15,765 creating build/lib.linux-armv7l-3.9/skbio/diversity/beta/tests 2021-07-11T21:20:15,766 copying skbio/diversity/beta/tests/test_unifrac.py -> build/lib.linux-armv7l-3.9/skbio/diversity/beta/tests 2021-07-11T21:20:15,769 copying skbio/diversity/beta/tests/__init__.py -> build/lib.linux-armv7l-3.9/skbio/diversity/beta/tests 2021-07-11T21:20:15,771 creating build/lib.linux-armv7l-3.9/skbio/sequence/tests 2021-07-11T21:20:15,772 copying skbio/sequence/tests/test_sequence.py -> build/lib.linux-armv7l-3.9/skbio/sequence/tests 2021-07-11T21:20:15,777 copying skbio/sequence/tests/test_protein.py -> build/lib.linux-armv7l-3.9/skbio/sequence/tests 2021-07-11T21:20:15,779 copying skbio/sequence/tests/test_dna.py -> build/lib.linux-armv7l-3.9/skbio/sequence/tests 2021-07-11T21:20:15,781 copying skbio/sequence/tests/test_nucleotide_sequences.py -> build/lib.linux-armv7l-3.9/skbio/sequence/tests 2021-07-11T21:20:15,784 copying skbio/sequence/tests/test_genetic_code.py -> build/lib.linux-armv7l-3.9/skbio/sequence/tests 2021-07-11T21:20:15,787 copying skbio/sequence/tests/__init__.py -> build/lib.linux-armv7l-3.9/skbio/sequence/tests 2021-07-11T21:20:15,789 copying skbio/sequence/tests/test_rna.py -> build/lib.linux-armv7l-3.9/skbio/sequence/tests 2021-07-11T21:20:15,791 copying skbio/sequence/tests/test_grammared_sequence.py -> build/lib.linux-armv7l-3.9/skbio/sequence/tests 2021-07-11T21:20:15,794 copying skbio/sequence/tests/test_distance.py -> build/lib.linux-armv7l-3.9/skbio/sequence/tests 2021-07-11T21:20:15,797 creating build/lib.linux-armv7l-3.9/skbio/alignment/tests 2021-07-11T21:20:15,798 copying skbio/alignment/tests/test_ssw.py -> build/lib.linux-armv7l-3.9/skbio/alignment/tests 2021-07-11T21:20:15,801 copying skbio/alignment/tests/test_tabular_msa.py -> build/lib.linux-armv7l-3.9/skbio/alignment/tests 2021-07-11T21:20:15,808 copying skbio/alignment/tests/__init__.py -> build/lib.linux-armv7l-3.9/skbio/alignment/tests 2021-07-11T21:20:15,810 copying skbio/alignment/tests/test_pairwise.py -> build/lib.linux-armv7l-3.9/skbio/alignment/tests 2021-07-11T21:20:15,815 creating build/lib.linux-armv7l-3.9/skbio/alignment/_lib 2021-07-11T21:20:15,815 copying skbio/alignment/_lib/__init__.py -> build/lib.linux-armv7l-3.9/skbio/alignment/_lib 2021-07-11T21:20:15,819 creating build/lib.linux-armv7l-3.9/skbio/io/format 2021-07-11T21:20:15,820 copying skbio/io/format/newick.py -> build/lib.linux-armv7l-3.9/skbio/io/format 2021-07-11T21:20:15,823 copying skbio/io/format/qseq.py -> build/lib.linux-armv7l-3.9/skbio/io/format 2021-07-11T21:20:15,825 copying skbio/io/format/_base.py -> build/lib.linux-armv7l-3.9/skbio/io/format 2021-07-11T21:20:15,828 copying skbio/io/format/phylip.py -> build/lib.linux-armv7l-3.9/skbio/io/format 2021-07-11T21:20:15,830 copying skbio/io/format/ordination.py -> build/lib.linux-armv7l-3.9/skbio/io/format 2021-07-11T21:20:15,833 copying skbio/io/format/blast6.py -> build/lib.linux-armv7l-3.9/skbio/io/format 2021-07-11T21:20:15,836 copying skbio/io/format/fasta.py -> build/lib.linux-armv7l-3.9/skbio/io/format 2021-07-11T21:20:15,839 copying skbio/io/format/__init__.py -> build/lib.linux-armv7l-3.9/skbio/io/format 2021-07-11T21:20:15,841 copying skbio/io/format/_blast.py -> build/lib.linux-armv7l-3.9/skbio/io/format 2021-07-11T21:20:15,843 copying skbio/io/format/genbank.py -> build/lib.linux-armv7l-3.9/skbio/io/format 2021-07-11T21:20:15,846 copying skbio/io/format/stockholm.py -> build/lib.linux-armv7l-3.9/skbio/io/format 2021-07-11T21:20:15,850 copying skbio/io/format/emptyfile.py -> build/lib.linux-armv7l-3.9/skbio/io/format 2021-07-11T21:20:15,852 copying skbio/io/format/fastq.py -> build/lib.linux-armv7l-3.9/skbio/io/format 2021-07-11T21:20:15,854 copying skbio/io/format/clustal.py -> build/lib.linux-armv7l-3.9/skbio/io/format 2021-07-11T21:20:15,857 copying skbio/io/format/lsmat.py -> build/lib.linux-armv7l-3.9/skbio/io/format 2021-07-11T21:20:15,859 copying skbio/io/format/blast7.py -> build/lib.linux-armv7l-3.9/skbio/io/format 2021-07-11T21:20:15,862 copying skbio/io/format/_sequence_feature_vocabulary.py -> build/lib.linux-armv7l-3.9/skbio/io/format 2021-07-11T21:20:15,865 creating build/lib.linux-armv7l-3.9/skbio/io/tests 2021-07-11T21:20:15,866 copying skbio/io/tests/test_registry.py -> build/lib.linux-armv7l-3.9/skbio/io/tests 2021-07-11T21:20:15,870 copying skbio/io/tests/__init__.py -> build/lib.linux-armv7l-3.9/skbio/io/tests 2021-07-11T21:20:15,872 copying skbio/io/tests/test_util.py -> build/lib.linux-armv7l-3.9/skbio/io/tests 2021-07-11T21:20:15,875 copying skbio/io/tests/test_iosources.py -> build/lib.linux-armv7l-3.9/skbio/io/tests 2021-07-11T21:20:15,878 creating build/lib.linux-armv7l-3.9/skbio/io/format/tests 2021-07-11T21:20:15,879 copying skbio/io/format/tests/test_base.py -> build/lib.linux-armv7l-3.9/skbio/io/format/tests 2021-07-11T21:20:15,882 copying skbio/io/format/tests/test_stockholm.py -> build/lib.linux-armv7l-3.9/skbio/io/format/tests 2021-07-11T21:20:15,885 copying skbio/io/format/tests/test_fasta.py -> build/lib.linux-armv7l-3.9/skbio/io/format/tests 2021-07-11T21:20:15,889 copying skbio/io/format/tests/test_genbank.py -> build/lib.linux-armv7l-3.9/skbio/io/format/tests 2021-07-11T21:20:15,892 copying skbio/io/format/tests/test_fastq.py -> build/lib.linux-armv7l-3.9/skbio/io/format/tests 2021-07-11T21:20:15,896 copying skbio/io/format/tests/test_newick.py -> build/lib.linux-armv7l-3.9/skbio/io/format/tests 2021-07-11T21:20:15,898 copying skbio/io/format/tests/__init__.py -> build/lib.linux-armv7l-3.9/skbio/io/format/tests 2021-07-11T21:20:15,900 copying skbio/io/format/tests/test_sequence_feature_vocabulary.py -> build/lib.linux-armv7l-3.9/skbio/io/format/tests 2021-07-11T21:20:15,902 copying skbio/io/format/tests/test_blast7.py -> build/lib.linux-armv7l-3.9/skbio/io/format/tests 2021-07-11T21:20:15,905 copying skbio/io/format/tests/test_emptyfile.py -> build/lib.linux-armv7l-3.9/skbio/io/format/tests 2021-07-11T21:20:15,907 copying skbio/io/format/tests/test_lsmat.py -> build/lib.linux-armv7l-3.9/skbio/io/format/tests 2021-07-11T21:20:15,909 copying skbio/io/format/tests/test_phylip.py -> build/lib.linux-armv7l-3.9/skbio/io/format/tests 2021-07-11T21:20:15,912 copying skbio/io/format/tests/test_qseq.py -> build/lib.linux-armv7l-3.9/skbio/io/format/tests 2021-07-11T21:20:15,915 copying skbio/io/format/tests/test_clustal.py -> build/lib.linux-armv7l-3.9/skbio/io/format/tests 2021-07-11T21:20:15,917 copying skbio/io/format/tests/test_blast6.py -> build/lib.linux-armv7l-3.9/skbio/io/format/tests 2021-07-11T21:20:15,919 copying skbio/io/format/tests/test_ordination.py -> build/lib.linux-armv7l-3.9/skbio/io/format/tests 2021-07-11T21:20:15,923 creating build/lib.linux-armv7l-3.9/skbio/metadata/tests 2021-07-11T21:20:15,924 copying skbio/metadata/tests/__init__.py -> build/lib.linux-armv7l-3.9/skbio/metadata/tests 2021-07-11T21:20:15,926 copying skbio/metadata/tests/test_mixin.py -> build/lib.linux-armv7l-3.9/skbio/metadata/tests 2021-07-11T21:20:15,928 copying skbio/metadata/tests/test_intersection.py -> build/lib.linux-armv7l-3.9/skbio/metadata/tests 2021-07-11T21:20:15,931 copying skbio/metadata/tests/test_interval.py -> build/lib.linux-armv7l-3.9/skbio/metadata/tests 2021-07-11T21:20:15,935 creating build/lib.linux-armv7l-3.9/skbio/tree/tests 2021-07-11T21:20:15,935 copying skbio/tree/tests/test_nj.py -> build/lib.linux-armv7l-3.9/skbio/tree/tests 2021-07-11T21:20:15,938 copying skbio/tree/tests/test_majority_rule.py -> build/lib.linux-armv7l-3.9/skbio/tree/tests 2021-07-11T21:20:15,941 copying skbio/tree/tests/__init__.py -> build/lib.linux-armv7l-3.9/skbio/tree/tests 2021-07-11T21:20:15,942 copying skbio/tree/tests/test_tree.py -> build/lib.linux-armv7l-3.9/skbio/tree/tests 2021-07-11T21:20:15,947 creating build/lib.linux-armv7l-3.9/skbio/stats/distance 2021-07-11T21:20:15,948 copying skbio/stats/distance/_base.py -> build/lib.linux-armv7l-3.9/skbio/stats/distance 2021-07-11T21:20:15,951 copying skbio/stats/distance/_anosim.py -> build/lib.linux-armv7l-3.9/skbio/stats/distance 2021-07-11T21:20:15,953 copying skbio/stats/distance/_bioenv.py -> build/lib.linux-armv7l-3.9/skbio/stats/distance 2021-07-11T21:20:15,956 copying skbio/stats/distance/_mantel.py -> build/lib.linux-armv7l-3.9/skbio/stats/distance 2021-07-11T21:20:15,960 copying skbio/stats/distance/__init__.py -> build/lib.linux-armv7l-3.9/skbio/stats/distance 2021-07-11T21:20:15,962 copying skbio/stats/distance/_permanova.py -> build/lib.linux-armv7l-3.9/skbio/stats/distance 2021-07-11T21:20:15,966 creating build/lib.linux-armv7l-3.9/skbio/stats/tests 2021-07-11T21:20:15,967 copying skbio/stats/tests/test_subsample.py -> build/lib.linux-armv7l-3.9/skbio/stats/tests 2021-07-11T21:20:15,969 copying skbio/stats/tests/test_power.py -> build/lib.linux-armv7l-3.9/skbio/stats/tests 2021-07-11T21:20:15,972 copying skbio/stats/tests/__init__.py -> build/lib.linux-armv7l-3.9/skbio/stats/tests 2021-07-11T21:20:15,974 copying skbio/stats/tests/test_composition.py -> build/lib.linux-armv7l-3.9/skbio/stats/tests 2021-07-11T21:20:15,977 copying skbio/stats/tests/test_misc.py -> build/lib.linux-armv7l-3.9/skbio/stats/tests 2021-07-11T21:20:15,979 copying skbio/stats/tests/test_gradient.py -> build/lib.linux-armv7l-3.9/skbio/stats/tests 2021-07-11T21:20:15,984 creating build/lib.linux-armv7l-3.9/skbio/stats/ordination 2021-07-11T21:20:15,985 copying skbio/stats/ordination/_utils.py -> build/lib.linux-armv7l-3.9/skbio/stats/ordination 2021-07-11T21:20:15,987 copying skbio/stats/ordination/_ordination_results.py -> build/lib.linux-armv7l-3.9/skbio/stats/ordination 2021-07-11T21:20:15,990 copying skbio/stats/ordination/_principal_coordinate_analysis.py -> build/lib.linux-armv7l-3.9/skbio/stats/ordination 2021-07-11T21:20:15,993 copying skbio/stats/ordination/_correspondence_analysis.py -> build/lib.linux-armv7l-3.9/skbio/stats/ordination 2021-07-11T21:20:15,995 copying skbio/stats/ordination/_canonical_correspondence_analysis.py -> build/lib.linux-armv7l-3.9/skbio/stats/ordination 2021-07-11T21:20:15,998 copying skbio/stats/ordination/_redundancy_analysis.py -> build/lib.linux-armv7l-3.9/skbio/stats/ordination 2021-07-11T21:20:16,000 copying skbio/stats/ordination/__init__.py -> build/lib.linux-armv7l-3.9/skbio/stats/ordination 2021-07-11T21:20:16,003 creating build/lib.linux-armv7l-3.9/skbio/stats/evolve 2021-07-11T21:20:16,004 copying skbio/stats/evolve/_hommola.py -> build/lib.linux-armv7l-3.9/skbio/stats/evolve 2021-07-11T21:20:16,007 copying skbio/stats/evolve/__init__.py -> build/lib.linux-armv7l-3.9/skbio/stats/evolve 2021-07-11T21:20:16,009 creating build/lib.linux-armv7l-3.9/skbio/stats/distance/tests 2021-07-11T21:20:16,010 copying skbio/stats/distance/tests/test_base.py -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests 2021-07-11T21:20:16,014 copying skbio/stats/distance/tests/test_mantel.py -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests 2021-07-11T21:20:16,017 copying skbio/stats/distance/tests/__init__.py -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests 2021-07-11T21:20:16,019 copying skbio/stats/distance/tests/test_bioenv.py -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests 2021-07-11T21:20:16,022 copying skbio/stats/distance/tests/test_anosim.py -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests 2021-07-11T21:20:16,024 copying skbio/stats/distance/tests/test_permanova.py -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests 2021-07-11T21:20:16,027 creating build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests 2021-07-11T21:20:16,028 copying skbio/stats/ordination/tests/test_redundancy_analysis.py -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests 2021-07-11T21:20:16,031 copying skbio/stats/ordination/tests/test_correspondence_analysis.py -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests 2021-07-11T21:20:16,033 copying skbio/stats/ordination/tests/test_canonical_correspondence_analysis.py -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests 2021-07-11T21:20:16,036 copying skbio/stats/ordination/tests/__init__.py -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests 2021-07-11T21:20:16,038 copying skbio/stats/ordination/tests/test_ordination_results.py -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests 2021-07-11T21:20:16,040 copying skbio/stats/ordination/tests/test_principal_coordinate_analysis.py -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests 2021-07-11T21:20:16,043 copying skbio/stats/ordination/tests/test_util.py -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests 2021-07-11T21:20:16,045 creating build/lib.linux-armv7l-3.9/skbio/stats/evolve/tests 2021-07-11T21:20:16,046 copying skbio/stats/evolve/tests/test_hommola.py -> build/lib.linux-armv7l-3.9/skbio/stats/evolve/tests 2021-07-11T21:20:16,049 copying skbio/stats/evolve/tests/__init__.py -> build/lib.linux-armv7l-3.9/skbio/stats/evolve/tests 2021-07-11T21:20:16,052 creating build/lib.linux-armv7l-3.9/skbio/util/tests 2021-07-11T21:20:16,052 copying skbio/util/tests/__init__.py -> build/lib.linux-armv7l-3.9/skbio/util/tests 2021-07-11T21:20:16,054 copying skbio/util/tests/test_testing.py -> build/lib.linux-armv7l-3.9/skbio/util/tests 2021-07-11T21:20:16,057 copying skbio/util/tests/test_misc.py -> build/lib.linux-armv7l-3.9/skbio/util/tests 2021-07-11T21:20:16,059 copying skbio/util/tests/test_decorator.py -> build/lib.linux-armv7l-3.9/skbio/util/tests 2021-07-11T21:20:16,110 creating build/lib.linux-armv7l-3.9/skbio/diversity/alpha/tests/data 2021-07-11T21:20:16,110 creating build/lib.linux-armv7l-3.9/skbio/diversity/alpha/tests/data/qiime-191-tt 2021-07-11T21:20:16,111 copying skbio/diversity/alpha/tests/data/qiime-191-tt/README.md -> build/lib.linux-armv7l-3.9/skbio/diversity/alpha/tests/data/qiime-191-tt 2021-07-11T21:20:16,113 copying skbio/diversity/alpha/tests/data/qiime-191-tt/tree.nwk -> build/lib.linux-armv7l-3.9/skbio/diversity/alpha/tests/data/qiime-191-tt 2021-07-11T21:20:16,115 copying skbio/diversity/alpha/tests/data/qiime-191-tt/faith-pd.txt -> build/lib.linux-armv7l-3.9/skbio/diversity/alpha/tests/data/qiime-191-tt 2021-07-11T21:20:16,117 copying skbio/diversity/alpha/tests/data/qiime-191-tt/otu-table.tsv -> build/lib.linux-armv7l-3.9/skbio/diversity/alpha/tests/data/qiime-191-tt 2021-07-11T21:20:16,119 creating build/lib.linux-armv7l-3.9/skbio/diversity/beta/tests/data 2021-07-11T21:20:16,119 creating build/lib.linux-armv7l-3.9/skbio/diversity/beta/tests/data/qiime-191-tt 2021-07-11T21:20:16,120 copying skbio/diversity/beta/tests/data/qiime-191-tt/README.md -> build/lib.linux-armv7l-3.9/skbio/diversity/beta/tests/data/qiime-191-tt 2021-07-11T21:20:16,123 copying skbio/diversity/beta/tests/data/qiime-191-tt/tree.nwk -> build/lib.linux-armv7l-3.9/skbio/diversity/beta/tests/data/qiime-191-tt 2021-07-11T21:20:16,125 copying skbio/diversity/beta/tests/data/qiime-191-tt/unweighted_unifrac_dm.txt -> build/lib.linux-armv7l-3.9/skbio/diversity/beta/tests/data/qiime-191-tt 2021-07-11T21:20:16,127 copying skbio/diversity/beta/tests/data/qiime-191-tt/weighted_unifrac_dm.txt -> build/lib.linux-armv7l-3.9/skbio/diversity/beta/tests/data/qiime-191-tt 2021-07-11T21:20:16,129 copying skbio/diversity/beta/tests/data/qiime-191-tt/otu-table.tsv -> build/lib.linux-armv7l-3.9/skbio/diversity/beta/tests/data/qiime-191-tt 2021-07-11T21:20:16,131 copying skbio/diversity/beta/tests/data/qiime-191-tt/weighted_normalized_unifrac_dm.txt -> build/lib.linux-armv7l-3.9/skbio/diversity/beta/tests/data/qiime-191-tt 2021-07-11T21:20:16,134 creating build/lib.linux-armv7l-3.9/skbio/io/tests/data 2021-07-11T21:20:16,134 copying skbio/io/tests/data/example_file.gz -> build/lib.linux-armv7l-3.9/skbio/io/tests/data 2021-07-11T21:20:16,137 copying skbio/io/tests/data/real_file_2 -> build/lib.linux-armv7l-3.9/skbio/io/tests/data 2021-07-11T21:20:16,139 copying skbio/io/tests/data/big5_file -> build/lib.linux-armv7l-3.9/skbio/io/tests/data 2021-07-11T21:20:16,141 copying skbio/io/tests/data/big5_file.bz2 -> build/lib.linux-armv7l-3.9/skbio/io/tests/data 2021-07-11T21:20:16,144 copying skbio/io/tests/data/example_file.bz2 -> build/lib.linux-armv7l-3.9/skbio/io/tests/data 2021-07-11T21:20:16,146 copying skbio/io/tests/data/example_file -> build/lib.linux-armv7l-3.9/skbio/io/tests/data 2021-07-11T21:20:16,148 copying skbio/io/tests/data/big5_file.gz -> build/lib.linux-armv7l-3.9/skbio/io/tests/data 2021-07-11T21:20:16,150 copying skbio/io/tests/data/real_file -> build/lib.linux-armv7l-3.9/skbio/io/tests/data 2021-07-11T21:20:16,153 creating build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,154 copying skbio/io/format/tests/data/error_trunc_at_qual.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,156 copying skbio/io/format/tests/data/fasta_5_blanks_start_of_file -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,158 copying skbio/io/format/tests/data/fastq_multi_ws_lines_between_records -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,161 copying skbio/io/format/tests/data/qual_id_whitespace_replacement_multi_char -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,163 copying skbio/io/format/tests/data/fastq_invalid_blank_within_seq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,165 copying skbio/io/format/tests/data/error_no_qual.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,168 copying skbio/io/format/tests/data/ordination_error3 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,171 copying skbio/io/format/tests/data/phylip_invalid_header_too_short -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,173 copying skbio/io/format/tests/data/stockholm_runon_references_mixed -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,175 copying skbio/io/format/tests/data/ordination_error10 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,177 copying skbio/io/format/tests/data/fasta_3_seqs_non_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,180 copying skbio/io/format/tests/data/fasta_invalid_blank_line_within_sequence -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,182 copying skbio/io/format/tests/data/longreads_as_sanger.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,185 copying skbio/io/format/tests/data/fasta_single_seq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,187 copying skbio/io/format/tests/data/blast7_custom_mixed_nans -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,190 copying skbio/io/format/tests/data/ordination_error1 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,192 copying skbio/io/format/tests/data/stockholm_single_tree_without_id -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,195 copying skbio/io/format/tests/data/qual_6_blanks_start_of_file -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,197 copying skbio/io/format/tests/data/qseq_multi_seq_illumina1.3 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,199 copying skbio/io/format/tests/data/ordination_error13 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,202 copying skbio/io/format/tests/data/error_qual_vtab.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,204 copying skbio/io/format/tests/data/stockholm_runon_gs_with_whitespace -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,206 copying skbio/io/format/tests/data/fasta_multi_seq_roundtrip -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,209 copying skbio/io/format/tests/data/error_short_qual.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,211 copying skbio/io/format/tests/data/qual_single_nuc_seq_non_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,213 copying skbio/io/format/tests/data/phylip_invalid_empty_line_before_header -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,215 copying skbio/io/format/tests/data/ordination_error12 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,218 copying skbio/io/format/tests/data/ordination_L&L_CA_data_scores -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,220 copying skbio/io/format/tests/data/fasta_blanks_end_of_file -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,222 copying skbio/io/format/tests/data/qseq_invalid_lane -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,225 copying skbio/io/format/tests/data/qual_invalid_qual_scores_over_255 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,227 copying skbio/io/format/tests/data/phylip_two_chunks -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,229 copying skbio/io/format/tests/data/longreads_original_sanger.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,232 copying skbio/io/format/tests/data/fasta_invalid_missing_seq_data_middle -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,234 copying skbio/io/format/tests/data/fasta_mixed_qual_scores -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,236 copying skbio/io/format/tests/data/error_diff_ids.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,239 copying skbio/io/format/tests/data/fastq_writer_sanger_non_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,241 copying skbio/io/format/tests/data/qual_invalid_qual_scores_float -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,243 copying skbio/io/format/tests/data/error_trunc_in_seq.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,246 copying skbio/io/format/tests/data/qual_3_seqs_non_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,248 copying skbio/io/format/tests/data/qual_max_width_5 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,250 copying skbio/io/format/tests/data/blast7_invalid_too_many_columns -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,253 copying skbio/io/format/tests/data/fasta_invalid_missing_seq_data_first -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,255 copying skbio/io/format/tests/data/error_qual_del.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,257 copying skbio/io/format/tests/data/ordination_error24 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,259 copying skbio/io/format/tests/data/qual_invalid_whitespace_only_sequence -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,262 copying skbio/io/format/tests/data/qual_invalid_blank_line_after_header -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,264 copying skbio/io/format/tests/data/stockholm_two_of_each_metadata -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,266 copying skbio/io/format/tests/data/fasta_id_whitespace_replacement_none -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,269 copying skbio/io/format/tests/data/fasta_invalid_whitespace_line_after_header -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,271 copying skbio/io/format/tests/data/stockholm_rna -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,273 copying skbio/io/format/tests/data/stockholm_whitespace_only_lines -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,276 copying skbio/io/format/tests/data/qual_5_ws_lines_start_of_file -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,278 copying skbio/io/format/tests/data/fastq_invalid_ws_line_after_header -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,280 copying skbio/io/format/tests/data/qual_invalid_blank_line_within_seq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,283 copying skbio/io/format/tests/data/stockholm_runon_gs_no_whitespace -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,285 copying skbio/io/format/tests/data/misc_dna_as_sanger.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,288 copying skbio/io/format/tests/data/stockholm_data_only -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,290 copying skbio/io/format/tests/data/illumina_full_range_original_illumina.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,293 copying skbio/io/format/tests/data/error_qual_tab.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,295 copying skbio/io/format/tests/data/fasta_single_bio_seq_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,297 copying skbio/io/format/tests/data/qual_3_seqs_defaults_extra -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,300 copying skbio/io/format/tests/data/ordination_error6 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,303 copying skbio/io/format/tests/data/fasta_5_ws_lines_start_of_file -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,305 copying skbio/io/format/tests/data/blast7_default_multi_line -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,308 copying skbio/io/format/tests/data/genbank_single_record -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,310 copying skbio/io/format/tests/data/genbank_5_blanks_start_of_file -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,313 copying skbio/io/format/tests/data/legacy9_mixed_nans -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,315 copying skbio/io/format/tests/data/stockholm_differing_gr_data_length -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,317 copying skbio/io/format/tests/data/fastq_multi_blank_start_of_file -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,320 copying skbio/io/format/tests/data/fastq_single_seq_illumina1.8 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,322 copying skbio/io/format/tests/data/phylip_invalid_zero_seq_len -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,325 copying skbio/io/format/tests/data/ordination_error7 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,327 copying skbio/io/format/tests/data/fastq_writer_illumina1.3_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,330 copying skbio/io/format/tests/data/fastq_multi_whitespace_stripping -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,332 copying skbio/io/format/tests/data/fasta_description_newline_replacement_multi_char -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,334 copying skbio/io/format/tests/data/phylip_whitespace_in_header_3 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,337 copying skbio/io/format/tests/data/fastq_writer_sanger_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,339 copying skbio/io/format/tests/data/ordination_error2 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,342 copying skbio/io/format/tests/data/fastq_invalid_ws_line_after_seq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,344 copying skbio/io/format/tests/data/blast7_invalid_no_data -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,346 copying skbio/io/format/tests/data/ordination_exp_Ordination_CCA_species -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,349 copying skbio/io/format/tests/data/sanger_full_range_as_sanger.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,351 copying skbio/io/format/tests/data/genbank_6_blanks_start_of_file -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,353 copying skbio/io/format/tests/data/qual_invalid_qual_scores_negative -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,356 copying skbio/io/format/tests/data/fasta_invalid_legacy_format -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,358 copying skbio/io/format/tests/data/qual_max_width_1 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,360 copying skbio/io/format/tests/data/fastq_wrapping_as_illumina_no_description -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,363 copying skbio/io/format/tests/data/fasta_3_seqs_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,365 copying skbio/io/format/tests/data/qual_blanks_end_of_file -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,367 copying skbio/io/format/tests/data/qual_invalid_blank_sequence -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,370 copying skbio/io/format/tests/data/fastq_wrapping_original_sanger_no_description -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,372 copying skbio/io/format/tests/data/stockholm_blank_lines -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,374 copying skbio/io/format/tests/data/misc_rna_as_illumina.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,376 copying skbio/io/format/tests/data/qual_invalid_missing_qual_scores_middle -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,379 copying skbio/io/format/tests/data/stockholm_missing_header -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,381 copying skbio/io/format/tests/data/fastq_multi_blank_end_of_file -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,383 copying skbio/io/format/tests/data/qual_single_prot_seq_non_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,386 copying skbio/io/format/tests/data/stockholm_multiple_references -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,388 copying skbio/io/format/tests/data/sanger_full_range_as_illumina.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,390 copying skbio/io/format/tests/data/wrapping_as_illumina.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,393 copying skbio/io/format/tests/data/stockholm_missing_reference_items -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,395 copying skbio/io/format/tests/data/qseq_invalid_read -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,397 copying skbio/io/format/tests/data/fastq_invalid_blank_after_seq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,399 copying skbio/io/format/tests/data/qseq_invalid_filter -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,402 copying skbio/io/format/tests/data/qual_multi_seq_roundtrip -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,404 copying skbio/io/format/tests/data/error_double_seq.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,406 copying skbio/io/format/tests/data/fastq_invalid_blank_after_plus -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,409 copying skbio/io/format/tests/data/stockholm_metadata_only -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,411 copying skbio/io/format/tests/data/phylip_invalid_zero_seqs -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,413 copying skbio/io/format/tests/data/ordination_error17 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,416 copying skbio/io/format/tests/data/phylip_invalid_too_many_seqs -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,418 copying skbio/io/format/tests/data/ordination_error23 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,420 copying skbio/io/format/tests/data/fastq_wrapping_as_sanger_no_description -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,423 copying skbio/io/format/tests/data/blast6_custom_mixed_nans -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,425 copying skbio/io/format/tests/data/ordination_exp_Ordination_PCoA_site -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,427 copying skbio/io/format/tests/data/fasta_invalid_after_10_seqs -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,430 copying skbio/io/format/tests/data/stockholm_malformed_gc_line -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,432 copying skbio/io/format/tests/data/fastq_multi_blank_between_records -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,434 copying skbio/io/format/tests/data/solexa_full_range_original_solexa.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,437 copying skbio/io/format/tests/data/error_tabs.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,439 copying skbio/io/format/tests/data/ordination_error18 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,442 copying skbio/io/format/tests/data/qual_single_seq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,444 copying skbio/io/format/tests/data/fasta_single_rna_seq_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,447 copying skbio/io/format/tests/data/ordination_error15 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,449 copying skbio/io/format/tests/data/illumina_full_range_as_illumina.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,452 copying skbio/io/format/tests/data/error_qual_escape.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,454 copying skbio/io/format/tests/data/sanger_full_range_original_sanger.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,457 copying skbio/io/format/tests/data/fastq_invalid_ws_line_within_qual -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,459 copying skbio/io/format/tests/data/genbank_multi_records -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,462 copying skbio/io/format/tests/data/qual_id_whitespace_replacement_empty_str -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,464 copying skbio/io/format/tests/data/fastq_single_seq_illumina1.3 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,468 copying skbio/io/format/tests/data/fastq_invalid_missing_header -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,471 copying skbio/io/format/tests/data/stockholm_missing_footer -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,474 copying skbio/io/format/tests/data/stockholm_runon_gf_with_whitespace -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,476 copying skbio/io/format/tests/data/ordination_exp_Ordination_CCA_site -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,479 copying skbio/io/format/tests/data/genbank_w_beginning_whitespace -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,481 copying skbio/io/format/tests/data/qual_single_bio_seq_non_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,483 copying skbio/io/format/tests/data/phylip_invalid_no_header -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,486 copying skbio/io/format/tests/data/qual_ws_lines_between_records -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,488 copying skbio/io/format/tests/data/misc_dna_as_illumina.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,491 copying skbio/io/format/tests/data/legacy9_invalid_too_many_columns -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,493 copying skbio/io/format/tests/data/legacy9_invalid_differing_fields -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,496 copying skbio/io/format/tests/data/blast6_default_single_line -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,498 copying skbio/io/format/tests/data/fasta_max_width_1 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,501 copying skbio/io/format/tests/data/genbank_missing_locus_name -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,503 copying skbio/io/format/tests/data/fasta_single_dna_seq_non_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,506 copying skbio/io/format/tests/data/fasta_invalid_missing_header -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,508 copying skbio/io/format/tests/data/stockholm_different_padding -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,511 copying skbio/io/format/tests/data/qual_ws_lines_end_of_file -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,514 copying skbio/io/format/tests/data/error_qual_space.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,516 copying skbio/io/format/tests/data/qual_tabular_msa_different_type -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,519 copying skbio/io/format/tests/data/phylip_dna_3_seqs -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,522 copying skbio/io/format/tests/data/qual_description_newline_replacement_multi_char -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,524 copying skbio/io/format/tests/data/stockholm_multiple_trees -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,527 copying skbio/io/format/tests/data/wrapping_original_sanger.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,529 copying skbio/io/format/tests/data/fastq_multi_ws_lines_start_of_file -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,532 copying skbio/io/format/tests/data/blast7_custom_single_line -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,534 copying skbio/io/format/tests/data/phylip_invalid_empty_line_after_header -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,537 copying skbio/io/format/tests/data/ordination_exp_Ordination_RDA_species -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,539 copying skbio/io/format/tests/data/error_trunc_in_title.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,542 copying skbio/io/format/tests/data/stockholm_differing_seq_lengths -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,544 copying skbio/io/format/tests/data/phylip_invalid_too_few_seqs -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,547 copying skbio/io/format/tests/data/legacy9_single_line -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,550 copying skbio/io/format/tests/data/fastq_invalid_ws_line_within_seq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,552 copying skbio/io/format/tests/data/stockholm_extensive -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,555 copying skbio/io/format/tests/data/stockholm_multi_line_tree_no_id -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,557 copying skbio/io/format/tests/data/legacy9_multi_line -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,560 copying skbio/io/format/tests/data/qual_prot_seqs_odd_labels -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,562 copying skbio/io/format/tests/data/qual_3_seqs_defaults_id_mismatch -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,565 copying skbio/io/format/tests/data/qual_invalid_ws_line_after_header -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,568 copying skbio/io/format/tests/data/blast6_invalid_type_in_column -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,570 copying skbio/io/format/tests/data/fasta_single_dna_seq_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,573 copying skbio/io/format/tests/data/stockholm_single_reference -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,575 copying skbio/io/format/tests/data/fasta_description_newline_replacement_empty_str -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,577 copying skbio/io/format/tests/data/stockholm_duplicate_tree_ids -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,580 copying skbio/io/format/tests/data/blast6_custom_minimal -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,582 copying skbio/io/format/tests/data/qual_single_rna_seq_non_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,585 copying skbio/io/format/tests/data/ordination_error5 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,588 copying skbio/io/format/tests/data/fasta_6_ws_lines_start_of_file -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,591 copying skbio/io/format/tests/data/ordination_error21 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,593 copying skbio/io/format/tests/data/blast7_default_single_line -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,596 copying skbio/io/format/tests/data/stockholm_duplicate_gc -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,598 copying skbio/io/format/tests/data/ordination_example3_scores -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,601 copying skbio/io/format/tests/data/error_double_qual.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,604 copying skbio/io/format/tests/data/blast7_invalid_differing_fields -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,607 copying skbio/io/format/tests/data/blast6_custom_single_line -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,609 copying skbio/io/format/tests/data/ordination_exp_Ordination_RDA_site -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,612 copying skbio/io/format/tests/data/fasta_single_prot_seq_non_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,614 copying skbio/io/format/tests/data/qual_5_blanks_start_of_file -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,617 copying skbio/io/format/tests/data/fastq_5_ws_lines_start_of_file -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,619 copying skbio/io/format/tests/data/fasta_invalid_whitespace_only_line_within_sequence -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,622 copying skbio/io/format/tests/data/qual_invalid_missing_qual_scores_last -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,624 copying skbio/io/format/tests/data/stockholm_missing_rn_tag -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,627 copying skbio/io/format/tests/data/fasta_id_whitespace_replacement_multi_char -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,629 copying skbio/io/format/tests/data/stockholm_extensive_mixed -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,632 copying skbio/io/format/tests/data/stockholm_invalid_data_type -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,634 copying skbio/io/format/tests/data/fasta_max_width_5 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,637 copying skbio/io/format/tests/data/fasta_invalid_whitespace_only_sequence -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,639 copying skbio/io/format/tests/data/fasta_description_newline_replacement_none -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,642 copying skbio/io/format/tests/data/qual_single_dna_seq_non_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,644 copying skbio/io/format/tests/data/genbank_single_record_upper -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,647 copying skbio/io/format/tests/data/stockholm_nonstring_labels -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,649 copying skbio/io/format/tests/data/fasta_id_whitespace_replacement_empty_str -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,652 copying skbio/io/format/tests/data/ordination_error22 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,654 copying skbio/io/format/tests/data/error_spaces.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,657 copying skbio/io/format/tests/data/phylip_invalid_seq_too_long -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,659 copying skbio/io/format/tests/data/ordination_example2_scores -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,662 copying skbio/io/format/tests/data/ordination_error8 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,664 copying skbio/io/format/tests/data/wrapping_as_sanger.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,667 copying skbio/io/format/tests/data/fasta_blank_lines_between_records -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,669 copying skbio/io/format/tests/data/qual_invalid_whitespace_line_in_seq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,672 copying skbio/io/format/tests/data/error_trunc_in_plus.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,674 copying skbio/io/format/tests/data/qseq_single_seq_sanger -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,677 copying skbio/io/format/tests/data/qual_blank_lines_between_records -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,679 copying skbio/io/format/tests/data/fasta_single_bio_seq_non_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,682 copying skbio/io/format/tests/data/error_trunc_in_qual.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,684 copying skbio/io/format/tests/data/blast6_custom_multi_line -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,687 copying skbio/io/format/tests/data/ordination_exp_Ordination_CCA_site_constraints -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,690 copying skbio/io/format/tests/data/phylip_invalid_empty_line_between_seqs -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,692 copying skbio/io/format/tests/data/ordination_error9 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,695 copying skbio/io/format/tests/data/fastq_multi_ws_lines_end_of_file -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,697 copying skbio/io/format/tests/data/phylip_whitespace_in_header_1 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,700 copying skbio/io/format/tests/data/error_qual_unit_sep.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,703 copying skbio/io/format/tests/data/fasta_invalid_blank_line_after_header -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,705 copying skbio/io/format/tests/data/tsv_8_fields -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,707 copying skbio/io/format/tests/data/fasta_ws_lines_between_records -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,710 copying skbio/io/format/tests/data/error_trunc_at_plus.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,712 copying skbio/io/format/tests/data/qseq_invalid_y -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,715 copying skbio/io/format/tests/data/qual_2_seqs_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,717 copying skbio/io/format/tests/data/fasta_multi_seq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,720 copying skbio/io/format/tests/data/fastq_invalid_missing_seq_data -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,723 copying skbio/io/format/tests/data/misc_rna_original_sanger.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,725 copying skbio/io/format/tests/data/fastq_5_blanks_start_of_file -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,728 copying skbio/io/format/tests/data/stockholm_runon_references -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,730 copying skbio/io/format/tests/data/genbank_single_record_lower -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,733 copying skbio/io/format/tests/data/fasta_prot_seqs_odd_labels -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,735 copying skbio/io/format/tests/data/ordination_error11 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,738 copying skbio/io/format/tests/data/fasta_invalid_missing_seq_data_last -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,741 copying skbio/io/format/tests/data/qseq_invalid_x -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,743 copying skbio/io/format/tests/data/fastq_multi_seq_sanger -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,745 copying skbio/io/format/tests/data/stockholm_malformed_gs_line -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,748 copying skbio/io/format/tests/data/stockholm_invalid_nonexistent_gr -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,750 copying skbio/io/format/tests/data/stockholm_invalid_nonexistent_gs -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,753 copying skbio/io/format/tests/data/error_long_qual.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,755 copying skbio/io/format/tests/data/stockholm_malformed_data_line -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,758 copying skbio/io/format/tests/data/fasta_single_prot_seq_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,760 copying skbio/io/format/tests/data/stockholm_multiple_msa -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,763 copying skbio/io/format/tests/data/ordination_exp_Ordination_RDA_site_constraints -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,765 copying skbio/io/format/tests/data/ordination_error14 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,768 copying skbio/io/format/tests/data/stockholm_multiple_multi_line_trees -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,770 copying skbio/io/format/tests/data/fasta_6_blanks_start_of_file -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,773 copying skbio/io/format/tests/data/blast7_invalid_unrecognized_field -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,776 copying skbio/io/format/tests/data/ordination_error19 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,778 copying skbio/io/format/tests/data/blast7_custom_multi_line -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,781 copying skbio/io/format/tests/data/stockholm_minimal -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,783 copying skbio/io/format/tests/data/phylip_whitespace_in_header_2 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,786 copying skbio/io/format/tests/data/stockholm_single_tree_with_id -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,788 copying skbio/io/format/tests/data/error_qual_null.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,791 copying skbio/io/format/tests/data/qual_invalid_missing_header -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,793 copying skbio/io/format/tests/data/misc_dna_original_sanger.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,796 copying skbio/io/format/tests/data/phylip_invalid_header_too_long -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,798 copying skbio/io/format/tests/data/fasta_single_rna_seq_non_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,801 copying skbio/io/format/tests/data/phylip_single_seq_short -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,803 copying skbio/io/format/tests/data/qual_invalid_missing_qual_scores_first -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,806 copying skbio/io/format/tests/data/fastq_invalid_blank_within_qual -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,808 copying skbio/io/format/tests/data/fasta_ws_lines_end_of_file -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,811 copying skbio/io/format/tests/data/phylip_single_seq_long -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,813 copying skbio/io/format/tests/data/qual_invalid_legacy_format -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,816 copying skbio/io/format/tests/data/longreads_as_illumina.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,819 copying skbio/io/format/tests/data/error_trunc_at_seq.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,821 copying skbio/io/format/tests/data/fasta_tabular_msa_different_type -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,824 copying skbio/io/format/tests/data/misc_rna_as_sanger.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,826 copying skbio/io/format/tests/data/blast7_invalid_for_sniffer_2 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,829 copying skbio/io/format/tests/data/empty -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,831 copying skbio/io/format/tests/data/whitespace_only -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,834 copying skbio/io/format/tests/data/blast6_default_multi_line -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,836 copying skbio/io/format/tests/data/phylip_varied_whitespace_in_seqs -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,839 copying skbio/io/format/tests/data/fastq_blank_lines -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,842 copying skbio/io/format/tests/data/stockholm_multi_line_tree_with_id -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,844 copying skbio/io/format/tests/data/blast7_invalid_for_sniffer -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,847 copying skbio/io/format/tests/data/qual_3_seqs_defaults_desc_mismatch -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,850 copying skbio/io/format/tests/data/stockholm_runon_gf_no_whitespace -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,852 copying skbio/io/format/tests/data/qual_invalid_qual_scores_string -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,855 copying skbio/io/format/tests/data/fastq_invalid_ws_line_after_plus -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,857 copying skbio/io/format/tests/data/qual_description_newline_replacement_empty_str -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,860 copying skbio/io/format/tests/data/blast7_custom_minimal -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,863 copying skbio/io/format/tests/data/stockholm_duplicate_gr -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,866 copying skbio/io/format/tests/data/ordination_error16 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,869 copying skbio/io/format/tests/data/blast6_invalid_column_types -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,871 copying skbio/io/format/tests/data/blast6_invalid_number_of_columns -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,874 copying skbio/io/format/tests/data/qual_multi_seq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,876 copying skbio/io/format/tests/data/qseq_invalid_tile -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,879 copying skbio/io/format/tests/data/stockholm_duplicate_sequence_names -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,881 copying skbio/io/format/tests/data/legacy9_and_blast7_default -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,884 copying skbio/io/format/tests/data/illumina_full_range_as_sanger.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,886 copying skbio/io/format/tests/data/fasta_invalid_blank_sequence -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,888 copying skbio/io/format/tests/data/qual_6_ws_lines_start_of_file -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,891 copying skbio/io/format/tests/data/qual_3_seqs_defaults_length_mismatch -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,893 copying skbio/io/format/tests/data/fastq_invalid_blank_in_seq_at_symbol -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,896 copying skbio/io/format/tests/data/stockholm_differing_gc_data_length -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,898 copying skbio/io/format/tests/data/tsv_10_fields -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,901 copying skbio/io/format/tests/data/stockholm_all_data_types -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,903 copying skbio/io/format/tests/data/stockholm_malformed_gf_line -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,906 copying skbio/io/format/tests/data/stockholm_no_data -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,908 copying skbio/io/format/tests/data/qual_id_whitespace_replacement_none -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,911 copying skbio/io/format/tests/data/phylip_variable_length_ids -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,913 copying skbio/io/format/tests/data/qual_description_newline_replacement_none -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,916 copying skbio/io/format/tests/data/blast7_invalid_gibberish -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,918 copying skbio/io/format/tests/data/ordination_error4 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,922 copying skbio/io/format/tests/data/fastq_whitespace_only_lines -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,924 copying skbio/io/format/tests/data/phylip_invalid_seq_too_short -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,927 copying skbio/io/format/tests/data/qual_3_seqs_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,929 copying skbio/io/format/tests/data/stockholm_malformed_gr_line -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,932 copying skbio/io/format/tests/data/fastq_invalid_blank_after_header -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,934 copying skbio/io/format/tests/data/ordination_PCoA_sample_data_3_scores -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,937 copying skbio/io/format/tests/data/fasta_10_seqs -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,939 copying skbio/io/format/tests/data/ordination_error20 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-11T21:20:16,942 creating build/lib.linux-armv7l-3.9/skbio/stats/tests/data 2021-07-11T21:20:16,943 copying skbio/stats/tests/data/cr_data_raw -> build/lib.linux-armv7l-3.9/skbio/stats/tests/data 2021-07-11T21:20:16,946 copying skbio/stats/tests/data/cr_no_data_out -> build/lib.linux-armv7l-3.9/skbio/stats/tests/data 2021-07-11T21:20:16,950 copying skbio/stats/tests/data/vr_out -> build/lib.linux-armv7l-3.9/skbio/stats/tests/data 2021-07-11T21:20:16,953 copying skbio/stats/tests/data/vr_real_raw -> build/lib.linux-armv7l-3.9/skbio/stats/tests/data 2021-07-11T21:20:16,955 copying skbio/stats/tests/data/cr_data_out -> build/lib.linux-armv7l-3.9/skbio/stats/tests/data 2021-07-11T21:20:16,957 copying skbio/stats/tests/data/gr_wo_msg_out -> build/lib.linux-armv7l-3.9/skbio/stats/tests/data 2021-07-11T21:20:16,960 copying skbio/stats/tests/data/gr_wo_msg_raw -> build/lib.linux-armv7l-3.9/skbio/stats/tests/data 2021-07-11T21:20:16,962 copying skbio/stats/tests/data/gr_w_msg_raw -> build/lib.linux-armv7l-3.9/skbio/stats/tests/data 2021-07-11T21:20:16,965 copying skbio/stats/tests/data/cr_no_data_raw -> build/lib.linux-armv7l-3.9/skbio/stats/tests/data 2021-07-11T21:20:16,967 copying skbio/stats/tests/data/vr_real_out -> build/lib.linux-armv7l-3.9/skbio/stats/tests/data 2021-07-11T21:20:16,969 copying skbio/stats/tests/data/vr_raw -> build/lib.linux-armv7l-3.9/skbio/stats/tests/data 2021-07-11T21:20:16,972 copying skbio/stats/tests/data/gr_w_msg_out -> build/lib.linux-armv7l-3.9/skbio/stats/tests/data 2021-07-11T21:20:16,974 creating build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2021-07-11T21:20:16,975 copying skbio/stats/distance/tests/data/bioenv_exp_results_vegan.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2021-07-11T21:20:16,978 copying skbio/stats/distance/tests/data/bioenv_dm_vegan.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2021-07-11T21:20:16,981 copying skbio/stats/distance/tests/data/dm.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2021-07-11T21:20:16,984 copying skbio/stats/distance/tests/data/dm2.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2021-07-11T21:20:16,986 copying skbio/stats/distance/tests/data/pwmantel_exp_results_dm_dm2.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2021-07-11T21:20:16,989 copying skbio/stats/distance/tests/data/bioenv_df_vegan.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2021-07-11T21:20:16,991 copying skbio/stats/distance/tests/data/exp_results.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2021-07-11T21:20:16,994 copying skbio/stats/distance/tests/data/pwmantel_exp_results_duplicate_dms.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2021-07-11T21:20:16,996 copying skbio/stats/distance/tests/data/pwmantel_exp_results_reordered_distance_matrices.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2021-07-11T21:20:16,999 copying skbio/stats/distance/tests/data/pwmantel_exp_results_all_dms.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2021-07-11T21:20:17,001 copying skbio/stats/distance/tests/data/pwmantel_exp_results_na_p_value.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2021-07-11T21:20:17,004 copying skbio/stats/distance/tests/data/exp_results_single_column.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2021-07-11T21:20:17,006 copying skbio/stats/distance/tests/data/pwmantel_exp_results_minimal_with_labels.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2021-07-11T21:20:17,009 copying skbio/stats/distance/tests/data/dm_reordered.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2021-07-11T21:20:17,011 copying skbio/stats/distance/tests/data/dm3.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2021-07-11T21:20:17,014 copying skbio/stats/distance/tests/data/mantel_env_dm_vegan.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2021-07-11T21:20:17,017 copying skbio/stats/distance/tests/data/mantel_veg_dm_vegan.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2021-07-11T21:20:17,021 copying skbio/stats/distance/tests/data/df_extra_column.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2021-07-11T21:20:17,023 copying skbio/stats/distance/tests/data/exp_results_different_column_order.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2021-07-11T21:20:17,026 copying skbio/stats/distance/tests/data/pwmantel_exp_results_minimal.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2021-07-11T21:20:17,028 copying skbio/stats/distance/tests/data/dm4.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2021-07-11T21:20:17,031 copying skbio/stats/distance/tests/data/df.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2021-07-11T21:20:17,033 creating build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-11T21:20:17,034 copying skbio/stats/ordination/tests/data/example2_species_scaling1_from_vegan -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-11T21:20:17,037 copying skbio/stats/ordination/tests/data/example2_species_scaling2_from_vegan -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-11T21:20:17,039 copying skbio/stats/ordination/tests/data/example2_sample_constraints_scaling1 -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-11T21:20:17,042 copying skbio/stats/ordination/tests/data/example3_species_scaling2_from_vegan -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-11T21:20:17,044 copying skbio/stats/ordination/tests/data/exp_PCoAzeros_site -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-11T21:20:17,047 copying skbio/stats/ordination/tests/data/example3_species_scaling1_from_vegan -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-11T21:20:17,050 copying skbio/stats/ordination/tests/data/example2_site_scaling1_from_vegan -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-11T21:20:17,052 copying skbio/stats/ordination/tests/data/example2_X -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-11T21:20:17,055 copying skbio/stats/ordination/tests/data/PCoA_sample_data_2 -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-11T21:20:17,057 copying skbio/stats/ordination/tests/data/PCoA_sample_data -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-11T21:20:17,060 copying skbio/stats/ordination/tests/data/example3_site_scaling1_from_vegan -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-11T21:20:17,062 copying skbio/stats/ordination/tests/data/L&L_CA_data -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-11T21:20:17,065 copying skbio/stats/ordination/tests/data/example2_site_scaling2_from_vegan -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-11T21:20:17,067 copying skbio/stats/ordination/tests/data/example2_biplot_scaling2 -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-11T21:20:17,070 copying skbio/stats/ordination/tests/data/example3_sample_constraints_scaling2 -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-11T21:20:17,072 copying skbio/stats/ordination/tests/data/example3_biplot_scaling1 -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-11T21:20:17,075 copying skbio/stats/ordination/tests/data/example3_Y -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-11T21:20:17,077 copying skbio/stats/ordination/tests/data/example2_Y -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-11T21:20:17,080 copying skbio/stats/ordination/tests/data/exp_PCoAEigenResults_site -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-11T21:20:17,082 copying skbio/stats/ordination/tests/data/example3_X -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-11T21:20:17,085 copying skbio/stats/ordination/tests/data/example3_site_scaling2_from_vegan -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-11T21:20:17,087 copying skbio/stats/ordination/tests/data/example2_biplot_scaling1 -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-11T21:20:17,090 copying skbio/stats/ordination/tests/data/example2_sample_constraints_scaling2 -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-11T21:20:17,092 copying skbio/stats/ordination/tests/data/example3_sample_constraints_scaling1 -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-11T21:20:17,095 copying skbio/stats/ordination/tests/data/PCoA_sample_data_3 -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-11T21:20:17,098 copying skbio/stats/ordination/tests/data/example3_biplot_scaling2 -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-11T21:20:17,126 running build_ext 2021-07-11T21:20:17,133 building 'skbio.metadata._intersection' extension 2021-07-11T21:20:17,133 creating build/temp.linux-armv7l-3.9 2021-07-11T21:20:17,133 creating build/temp.linux-armv7l-3.9/skbio 2021-07-11T21:20:17,134 creating build/temp.linux-armv7l-3.9/skbio/metadata 2021-07-11T21:20:17,135 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c skbio/metadata/_intersection.c -o build/temp.linux-armv7l-3.9/skbio/metadata/_intersection.o 2021-07-11T21:20:17,671 skbio/metadata/_intersection.c: In function ‘PyInit__intersection’: 2021-07-11T21:20:17,675 skbio/metadata/_intersection.c:8617:59: error: ‘PyTypeObject’ {aka ‘struct _typeobject’} has no member named ‘tp_print’ 2021-07-11T21:20:17,675 8617 | __pyx_type_5skbio_8metadata_13_intersection_IntervalNode.tp_print = 0; 2021-07-11T21:20:17,675 | ^ 2021-07-11T21:20:17,680 skbio/metadata/_intersection.c:8622:58: error: ‘PyTypeObject’ {aka ‘struct _typeobject’} has no member named ‘tp_print’ 2021-07-11T21:20:17,680 8622 | __pyx_type_5skbio_8metadata_13_intersection_IntervalObj.tp_print = 0; 2021-07-11T21:20:17,680 | ^ 2021-07-11T21:20:17,684 skbio/metadata/_intersection.c:8626:59: error: ‘PyTypeObject’ {aka ‘struct _typeobject’} has no member named ‘tp_print’ 2021-07-11T21:20:17,684 8626 | __pyx_type_5skbio_8metadata_13_intersection_IntervalTree.tp_print = 0; 2021-07-11T21:20:17,684 | ^ 2021-07-11T21:20:17,691 skbio/metadata/_intersection.c: In function ‘__Pyx_ParseOptionalKeywords’: 2021-07-11T21:20:17,696 skbio/metadata/_intersection.c:8877:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-11T21:20:17,696 8877 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-11T21:20:17,696 | ^ 2021-07-11T21:20:17,696 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-11T21:20:17,696 from /usr/include/python3.9/Python.h:97, 2021-07-11T21:20:17,697 from skbio/metadata/_intersection.c:4: 2021-07-11T21:20:17,697 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-11T21:20:17,697 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-11T21:20:17,697 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-11T21:20:17,702 skbio/metadata/_intersection.c:8877:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-11T21:20:17,702 8877 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-11T21:20:17,702 | ^ 2021-07-11T21:20:17,702 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-11T21:20:17,702 from /usr/include/python3.9/Python.h:97, 2021-07-11T21:20:17,702 from skbio/metadata/_intersection.c:4: 2021-07-11T21:20:17,702 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-11T21:20:17,703 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-11T21:20:17,703 | ^~~~~~~~~~~~~~~~~~~ 2021-07-11T21:20:17,707 skbio/metadata/_intersection.c:8877:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-11T21:20:17,707 8877 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-11T21:20:17,707 | ^ 2021-07-11T21:20:17,707 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-11T21:20:17,708 from /usr/include/python3.9/Python.h:97, 2021-07-11T21:20:17,708 from skbio/metadata/_intersection.c:4: 2021-07-11T21:20:17,708 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-11T21:20:17,708 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-11T21:20:17,708 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-11T21:20:17,712 skbio/metadata/_intersection.c:8877:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-11T21:20:17,713 8877 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-11T21:20:17,713 | ^ 2021-07-11T21:20:17,713 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-11T21:20:17,713 from /usr/include/python3.9/Python.h:97, 2021-07-11T21:20:17,713 from skbio/metadata/_intersection.c:4: 2021-07-11T21:20:17,713 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-11T21:20:17,713 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-11T21:20:17,713 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-11T21:20:17,718 skbio/metadata/_intersection.c:8877:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-11T21:20:17,718 8877 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-11T21:20:17,718 | ^ 2021-07-11T21:20:17,718 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-11T21:20:17,718 from /usr/include/python3.9/Python.h:97, 2021-07-11T21:20:17,718 from skbio/metadata/_intersection.c:4: 2021-07-11T21:20:17,718 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-11T21:20:17,719 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-11T21:20:17,719 | ^~~~~~~~~~~~~~~~~~~ 2021-07-11T21:20:17,723 skbio/metadata/_intersection.c:8877:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-11T21:20:17,723 8877 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-11T21:20:17,723 | ^ 2021-07-11T21:20:17,724 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-11T21:20:17,724 from /usr/include/python3.9/Python.h:97, 2021-07-11T21:20:17,724 from skbio/metadata/_intersection.c:4: 2021-07-11T21:20:17,724 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-11T21:20:17,724 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-11T21:20:17,724 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-11T21:20:17,730 skbio/metadata/_intersection.c:8893:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-11T21:20:17,730 8893 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-11T21:20:17,730 | ^ 2021-07-11T21:20:17,730 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-11T21:20:17,730 from /usr/include/python3.9/Python.h:97, 2021-07-11T21:20:17,730 from skbio/metadata/_intersection.c:4: 2021-07-11T21:20:17,731 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-11T21:20:17,731 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-11T21:20:17,731 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-11T21:20:17,735 skbio/metadata/_intersection.c:8893:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-11T21:20:17,735 8893 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-11T21:20:17,735 | ^ 2021-07-11T21:20:17,735 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-11T21:20:17,736 from /usr/include/python3.9/Python.h:97, 2021-07-11T21:20:17,736 from skbio/metadata/_intersection.c:4: 2021-07-11T21:20:17,736 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-11T21:20:17,736 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-11T21:20:17,736 | ^~~~~~~~~~~~~~~~~~~ 2021-07-11T21:20:17,740 skbio/metadata/_intersection.c:8893:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-11T21:20:17,741 8893 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-11T21:20:17,741 | ^ 2021-07-11T21:20:17,741 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-11T21:20:17,741 from /usr/include/python3.9/Python.h:97, 2021-07-11T21:20:17,741 from skbio/metadata/_intersection.c:4: 2021-07-11T21:20:17,741 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-11T21:20:17,741 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-11T21:20:17,741 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-11T21:20:17,746 skbio/metadata/_intersection.c:8893:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-11T21:20:17,746 8893 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-11T21:20:17,746 | ^ 2021-07-11T21:20:17,746 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-11T21:20:17,746 from /usr/include/python3.9/Python.h:97, 2021-07-11T21:20:17,746 from skbio/metadata/_intersection.c:4: 2021-07-11T21:20:17,746 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-11T21:20:17,747 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-11T21:20:17,747 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-11T21:20:17,751 skbio/metadata/_intersection.c:8893:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-11T21:20:17,751 8893 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-11T21:20:17,751 | ^ 2021-07-11T21:20:17,751 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-11T21:20:17,752 from /usr/include/python3.9/Python.h:97, 2021-07-11T21:20:17,752 from skbio/metadata/_intersection.c:4: 2021-07-11T21:20:17,752 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-11T21:20:17,752 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-11T21:20:17,752 | ^~~~~~~~~~~~~~~~~~~ 2021-07-11T21:20:17,756 skbio/metadata/_intersection.c:8893:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-11T21:20:17,757 8893 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-11T21:20:17,757 | ^ 2021-07-11T21:20:17,757 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-11T21:20:17,757 from /usr/include/python3.9/Python.h:97, 2021-07-11T21:20:17,757 from skbio/metadata/_intersection.c:4: 2021-07-11T21:20:17,757 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-11T21:20:17,757 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-11T21:20:17,757 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-11T21:20:17,971 error: command '/usr/bin/arm-linux-gnueabihf-gcc' failed with exit code 1 2021-07-11T21:20:18,089 Building wheel for scikit-bio (setup.py): finished with status 'error' 2021-07-11T21:20:18,090 ERROR: Failed building wheel for scikit-bio 2021-07-11T21:20:18,091 Running setup.py clean for scikit-bio 2021-07-11T21:20:18,091 Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-8ysfpkab/scikit-bio_c1e8119acaf542c19ef892551d157c50/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-8ysfpkab/scikit-bio_c1e8119acaf542c19ef892551d157c50/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' clean --all 2021-07-11T21:20:19,412 running clean 2021-07-11T21:20:19,415 removing 'build/temp.linux-armv7l-3.9' (and everything under it) 2021-07-11T21:20:19,418 removing 'build/lib.linux-armv7l-3.9' (and everything under it) 2021-07-11T21:20:19,712 'build/bdist.linux-armv7l' does not exist -- can't clean it 2021-07-11T21:20:19,712 'build/scripts-3.9' does not exist -- can't clean it 2021-07-11T21:20:19,712 removing 'build' 2021-07-11T21:20:19,802 Failed to build scikit-bio 2021-07-11T21:20:19,803 ERROR: Failed to build one or more wheels 2021-07-11T21:20:19,804 Exception information: 2021-07-11T21:20:19,804 Traceback (most recent call last): 2021-07-11T21:20:19,804 File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/cli/base_command.py", line 180, in _main 2021-07-11T21:20:19,804 status = self.run(options, args) 2021-07-11T21:20:19,804 File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/cli/req_command.py", line 205, in wrapper 2021-07-11T21:20:19,804 return func(self, options, args) 2021-07-11T21:20:19,804 File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/commands/wheel.py", line 174, in run 2021-07-11T21:20:19,804 raise CommandError( 2021-07-11T21:20:19,804 pip._internal.exceptions.CommandError: Failed to build one or more wheels 2021-07-11T21:20:19,806 Removed build tracker: '/tmp/pip-req-tracker-yr06w5dk'