2021-07-12T00:48:20,867 Created temporary directory: /tmp/pip-ephem-wheel-cache-a291am3z 2021-07-12T00:48:20,869 Created temporary directory: /tmp/pip-req-tracker-ce8_wa4t 2021-07-12T00:48:20,870 Initialized build tracking at /tmp/pip-req-tracker-ce8_wa4t 2021-07-12T00:48:20,870 Created build tracker: /tmp/pip-req-tracker-ce8_wa4t 2021-07-12T00:48:20,870 Entered build tracker: /tmp/pip-req-tracker-ce8_wa4t 2021-07-12T00:48:20,871 Created temporary directory: /tmp/pip-wheel-117kyw_o 2021-07-12T00:48:20,900 1 location(s) to search for versions of cykdtree: 2021-07-12T00:48:20,900 * https://pypi.org/simple/cykdtree/ 2021-07-12T00:48:20,900 Fetching project page and analyzing links: https://pypi.org/simple/cykdtree/ 2021-07-12T00:48:20,901 Getting page https://pypi.org/simple/cykdtree/ 2021-07-12T00:48:20,902 Found index url https://pypi.org/simple 2021-07-12T00:48:20,995 Found link https://files.pythonhosted.org/packages/c9/74/10e226e9feced8587ace70e47df6bf422612e3f3f6571f7c23c45f55a96c/cykdtree-0.1.tar.gz#sha256=b1030df1e8d0e23f1e43ccb6e319812fa1bc011f674a6843c025a466d9631244 (from https://pypi.org/simple/cykdtree/), version: 0.1 2021-07-12T00:48:20,996 Found link https://files.pythonhosted.org/packages/df/64/2f4da2007ae5ae3b51d8363e51d2d1e96ca274d46ff19c3556b0b78e31c7/cykdtree-0.1.1b0.tar.gz#sha256=b034746e108e6c49f25c159dc19b79107869576f8803079cc0d966e893dfd822 (from https://pypi.org/simple/cykdtree/), version: 0.1.1b0 2021-07-12T00:48:20,996 Found link https://files.pythonhosted.org/packages/e6/ca/45a859ee36bd13db5607b2cf9ae5c495862554f173a9dbd5a5d7c1afe72b/cykdtree-0.1.1.tar.gz#sha256=04f2d876d3c12026e760ee33000bb4a1f33ad2552a5ad2cfde95997e8942e1f2 (from https://pypi.org/simple/cykdtree/), version: 0.1.1 2021-07-12T00:48:20,996 Found link https://files.pythonhosted.org/packages/55/45/841495daa4c0fef6de4494a17095da4966a16e71f11666415d41ca640c34/cykdtree-0.1.2.tar.gz#sha256=1dd776487bdfcb183daef519e187ed1ecd71d3024df5b5d3133db5b7085fd28a (from https://pypi.org/simple/cykdtree/), version: 0.1.2 2021-07-12T00:48:20,997 Found link https://files.pythonhosted.org/packages/57/30/42fea8a1888cf655433e20a2cf504a1998c335f4be4bac8e62211bd0ce56/cykdtree-0.1.3.tar.gz#sha256=b3a4c295645cbe9f42dddebf3d081d4c5081b512677d1c468e9e02f1dc62bfe7 (from https://pypi.org/simple/cykdtree/), version: 0.1.3 2021-07-12T00:48:20,997 Found link https://files.pythonhosted.org/packages/40/a2/2741a9d8cfa09e1a240eae4ad1d19bb11d16fc97190d765a65346b55e2bc/cykdtree-0.1.4.tar.gz#sha256=0dceeaed450eef996b3a37cf1dd1116475aa14517b9e1e392baf45f05fbf29de (from https://pypi.org/simple/cykdtree/), version: 0.1.4 2021-07-12T00:48:20,997 Found link https://files.pythonhosted.org/packages/32/38/7c7c72d01df0075d1043c763fbe6241be5481b282016f31419b0d30029cb/cykdtree-0.1.5.tar.gz#sha256=ed21e1225c3ba3a223f34955fc1d3cf03ebeb10fb0aaa95ad90a1b49fde765f7 (from https://pypi.org/simple/cykdtree/), version: 0.1.5 2021-07-12T00:48:20,998 Found link https://files.pythonhosted.org/packages/25/87/bd0567123648ef4fe3283b243245e2d0509d8d4449e09d976505afa8fa11/cykdtree-0.1.6.tar.gz#sha256=93022f8cbc9b3d5c869bd06d60d6d7d8cef143ce55d8cbb5396b912002b3134b (from https://pypi.org/simple/cykdtree/), version: 0.1.6 2021-07-12T00:48:20,998 Found link https://files.pythonhosted.org/packages/c8/fd/b0c0b9db5a16705022b7e6728d5b2b2818626b4df83440a0698ddb260638/cykdtree-0.1.7.tar.gz#sha256=e059f7080cab2de61cc4c4aa1e216e0d5e434f1d530090b03422c11badaf1256 (from https://pypi.org/simple/cykdtree/), version: 0.1.7 2021-07-12T00:48:20,998 Found link https://files.pythonhosted.org/packages/3b/e5/0cb550e1b0fe1e085b17f5cb00d53e46df274a61eefe0a790e472a497309/cykdtree-0.1.8.tar.gz#sha256=79e19f4a0474d563c33d33ccb3cd73e07469d5556cf4d06b0e0ecd3e1cbe9afc (from https://pypi.org/simple/cykdtree/), version: 0.1.8 2021-07-12T00:48:20,998 Found link https://files.pythonhosted.org/packages/95/82/df2975b2978456075942c7ca3091b7b8ec93aa974a22a6f5ab7101482a48/cykdtree-0.1.9.tar.gz#sha256=17a4ea482e6d2df3c16a2ed0cb55e964f1280ebed93cbcfb094d7661658e961f (from https://pypi.org/simple/cykdtree/), version: 0.1.9 2021-07-12T00:48:20,999 Found link https://files.pythonhosted.org/packages/11/45/c113637e23967a5393415eb22e3a6bb2842f84cbe29025554b77c62b7019/cykdtree-0.2-0.tar.gz#sha256=807c05497aad089d4ce94a1cd923c5f3d0a9c6136ce089a4bb437fd60389864b (from https://pypi.org/simple/cykdtree/), version: 0.2-0 2021-07-12T00:48:20,999 Found link https://files.pythonhosted.org/packages/5d/24/0a6cc2b9aab74ba8d5aaab539423a2584fd9067b4c34b0e346035349e72a/cykdtree-0.2.1.tar.gz#sha256=1d14d21b46c7b74fd708762a972c563bd424fe9e1bed2d85ef8c685affd6b485 (from https://pypi.org/simple/cykdtree/), version: 0.2.1 2021-07-12T00:48:20,999 Found link https://files.pythonhosted.org/packages/cd/c1/d7230a47fc43ac5c9151f42443cf64912fe446425ec005b8da6a02274114/cykdtree-0.2.2.tar.gz#sha256=4dced6e8c25fff81b887f407590b28b097e4dfc76f94723d115b3fa6c7b69602 (from https://pypi.org/simple/cykdtree/), version: 0.2.2 2021-07-12T00:48:21,000 Found link https://files.pythonhosted.org/packages/4a/53/560e107859bdba0c096218b7a195982eb6571f8e7f833a5229a8e11ea51d/cykdtree-0.2.3.tar.gz#sha256=77c82504ff4c130f81d65e5f7f7d0ccd405fe60efbb0688ad88f277836621c27 (from https://pypi.org/simple/cykdtree/), version: 0.2.3 2021-07-12T00:48:21,000 Found link https://files.pythonhosted.org/packages/95/b4/d607852a54695537241406ab93a8ea7607c21e3aec7309921b786e8b7fc3/cykdtree-0.2.4.tar.gz#sha256=e58104def3f030dc9bd73e4b9a1575cedafec78354d3d37fa455f3478a3200f2 (from https://pypi.org/simple/cykdtree/), version: 0.2.4 2021-07-12T00:48:21,000 Skipping link: not a file: https://pypi.org/simple/cykdtree/ 2021-07-12T00:48:21,020 Given no hashes to check 1 links for project 'cykdtree': discarding no candidates 2021-07-12T00:48:21,039 Collecting cykdtree==0.2-0 2021-07-12T00:48:21,041 Created temporary directory: /tmp/pip-unpack-29tgr6nw 2021-07-12T00:48:21,704 Downloading cykdtree-0.2-0.tar.gz (740 kB) 2021-07-12T00:48:22,151 Added cykdtree==0.2-0 from https://files.pythonhosted.org/packages/11/45/c113637e23967a5393415eb22e3a6bb2842f84cbe29025554b77c62b7019/cykdtree-0.2-0.tar.gz#sha256=807c05497aad089d4ce94a1cd923c5f3d0a9c6136ce089a4bb437fd60389864b to build tracker '/tmp/pip-req-tracker-ce8_wa4t' 2021-07-12T00:48:22,152 Running setup.py (path:/tmp/pip-wheel-117kyw_o/cykdtree_0f485d81035b494f89071d1a4f4bc25f/setup.py) egg_info for package cykdtree 2021-07-12T00:48:22,153 Created temporary directory: /tmp/pip-pip-egg-info-llpew5l5 2021-07-12T00:48:22,153 Running command python setup.py egg_info 2021-07-12T00:48:23,649 g++: error: unrecognized command-line option ‘-compile_info’ 2021-07-12T00:48:23,650 g++: fatal error: no input files 2021-07-12T00:48:23,650 compilation terminated. 2021-07-12T00:48:23,706 /usr/bin/ld: cannot find -link_info 2021-07-12T00:48:23,774 collect2: error: ld returned 1 exit status 2021-07-12T00:48:24,719 /usr/local/lib/python3.9/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-117kyw_o/cykdtree_0f485d81035b494f89071d1a4f4bc25f/cykdtree/utils.pxd 2021-07-12T00:48:24,719 tree = Parsing.p_module(s, pxd, full_module_name) 2021-07-12T00:48:26,492 /usr/local/lib/python3.9/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-117kyw_o/cykdtree_0f485d81035b494f89071d1a4f4bc25f/cykdtree/kdtree.pxd 2021-07-12T00:48:26,492 tree = Parsing.p_module(s, pxd, full_module_name) 2021-07-12T00:48:34,804 /usr/local/lib/python3.9/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-117kyw_o/cykdtree_0f485d81035b494f89071d1a4f4bc25f/cykdtree/parallel_kdtree.pxd 2021-07-12T00:48:34,805 tree = Parsing.p_module(s, pxd, full_module_name) 2021-07-12T00:48:37,673 Compiling cykdtree/kdtree.pyx because it depends on /usr/local/lib/python3.9/dist-packages/Cython/Includes/libcpp/vector.pxd. 2021-07-12T00:48:37,674 Compiling cykdtree/utils.pyx because it depends on /usr/local/lib/python3.9/dist-packages/Cython/Includes/libcpp/vector.pxd. 2021-07-12T00:48:37,674 Compiling cykdtree/parallel_kdtree.pyx because it depends on /usr/local/lib/python3.9/dist-packages/Cython/Includes/libcpp/vector.pxd. 2021-07-12T00:48:37,674 [1/3] Cythonizing cykdtree/utils.pyx 2021-07-12T00:48:37,674 [2/3] Cythonizing cykdtree/kdtree.pyx 2021-07-12T00:48:37,674 [3/3] Cythonizing cykdtree/parallel_kdtree.pyx 2021-07-12T00:48:37,809 /usr/local/lib/python3.9/dist-packages/setuptools/dist.py:498: UserWarning: The version specified ('0.2,0') is an invalid version, this may not work as expected with newer versions of setuptools, pip, and PyPI. Please see PEP 440 for more details. 2021-07-12T00:48:37,809 warnings.warn( 2021-07-12T00:48:37,812 /usr/local/lib/python3.9/dist-packages/setuptools/dist.py:697: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead 2021-07-12T00:48:37,812 warnings.warn( 2021-07-12T00:48:37,834 running egg_info 2021-07-12T00:48:37,836 creating /tmp/pip-pip-egg-info-llpew5l5/cykdtree.egg-info 2021-07-12T00:48:37,838 writing /tmp/pip-pip-egg-info-llpew5l5/cykdtree.egg-info/PKG-INFO 2021-07-12T00:48:37,840 writing dependency_links to /tmp/pip-pip-egg-info-llpew5l5/cykdtree.egg-info/dependency_links.txt 2021-07-12T00:48:37,843 writing top-level names to /tmp/pip-pip-egg-info-llpew5l5/cykdtree.egg-info/top_level.txt 2021-07-12T00:48:37,844 writing manifest file '/tmp/pip-pip-egg-info-llpew5l5/cykdtree.egg-info/SOURCES.txt' 2021-07-12T00:48:38,003 reading manifest file '/tmp/pip-pip-egg-info-llpew5l5/cykdtree.egg-info/SOURCES.txt' 2021-07-12T00:48:38,004 reading manifest template 'MANIFEST.in' 2021-07-12T00:48:38,060 adding license file 'LICENSE.txt' 2021-07-12T00:48:38,065 writing manifest file '/tmp/pip-pip-egg-info-llpew5l5/cykdtree.egg-info/SOURCES.txt' 2021-07-12T00:48:38,523 Source in /tmp/pip-wheel-117kyw_o/cykdtree_0f485d81035b494f89071d1a4f4bc25f has version 0.2-0, which satisfies requirement cykdtree==0.2-0 from https://files.pythonhosted.org/packages/11/45/c113637e23967a5393415eb22e3a6bb2842f84cbe29025554b77c62b7019/cykdtree-0.2-0.tar.gz#sha256=807c05497aad089d4ce94a1cd923c5f3d0a9c6136ce089a4bb437fd60389864b 2021-07-12T00:48:38,524 Removed cykdtree==0.2-0 from https://files.pythonhosted.org/packages/11/45/c113637e23967a5393415eb22e3a6bb2842f84cbe29025554b77c62b7019/cykdtree-0.2-0.tar.gz#sha256=807c05497aad089d4ce94a1cd923c5f3d0a9c6136ce089a4bb437fd60389864b from build tracker '/tmp/pip-req-tracker-ce8_wa4t' 2021-07-12T00:48:38,528 Created temporary directory: /tmp/pip-unpack-gdxwf87r 2021-07-12T00:48:38,529 Building wheels for collected packages: cykdtree 2021-07-12T00:48:38,533 Created temporary directory: /tmp/pip-wheel-uexi6ft5 2021-07-12T00:48:38,534 Building wheel for cykdtree (setup.py): started 2021-07-12T00:48:38,534 Destination directory: /tmp/pip-wheel-uexi6ft5 2021-07-12T00:48:38,534 Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-117kyw_o/cykdtree_0f485d81035b494f89071d1a4f4bc25f/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-117kyw_o/cykdtree_0f485d81035b494f89071d1a4f4bc25f/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-uexi6ft5 2021-07-12T00:48:39,912 g++: error: unrecognized command-line option ‘-compile_info’ 2021-07-12T00:48:39,913 g++: fatal error: no input files 2021-07-12T00:48:39,913 compilation terminated. 2021-07-12T00:48:39,975 /usr/bin/ld: cannot find -link_info 2021-07-12T00:48:40,041 collect2: error: ld returned 1 exit status 2021-07-12T00:48:40,889 /usr/local/lib/python3.9/dist-packages/setuptools/dist.py:498: UserWarning: The version specified ('0.2,0') is an invalid version, this may not work as expected with newer versions of setuptools, pip, and PyPI. Please see PEP 440 for more details. 2021-07-12T00:48:40,889 warnings.warn( 2021-07-12T00:48:40,891 /usr/local/lib/python3.9/dist-packages/setuptools/dist.py:697: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead 2021-07-12T00:48:40,892 warnings.warn( 2021-07-12T00:48:40,925 running bdist_wheel 2021-07-12T00:48:40,930 running build 2021-07-12T00:48:40,931 running build_py 2021-07-12T00:48:41,067 creating build 2021-07-12T00:48:41,067 creating build/lib.linux-armv7l-3.9 2021-07-12T00:48:41,068 creating build/lib.linux-armv7l-3.9/cykdtree 2021-07-12T00:48:41,070 copying cykdtree/__init__.py -> build/lib.linux-armv7l-3.9/cykdtree 2021-07-12T00:48:41,072 creating build/lib.linux-armv7l-3.9/cykdtree/tests 2021-07-12T00:48:41,073 copying cykdtree/tests/test_parallel_kdtree.py -> build/lib.linux-armv7l-3.9/cykdtree/tests 2021-07-12T00:48:41,076 copying cykdtree/tests/run_yt.py -> build/lib.linux-armv7l-3.9/cykdtree/tests 2021-07-12T00:48:41,078 copying cykdtree/tests/test_utils.py -> build/lib.linux-armv7l-3.9/cykdtree/tests 2021-07-12T00:48:41,081 copying cykdtree/tests/__init__.py -> build/lib.linux-armv7l-3.9/cykdtree/tests 2021-07-12T00:48:41,082 copying cykdtree/tests/test_kdtree.py -> build/lib.linux-armv7l-3.9/cykdtree/tests 2021-07-12T00:48:41,086 running build_ext 2021-07-12T00:48:41,093 building 'cykdtree.kdtree' extension 2021-07-12T00:48:41,094 creating build/temp.linux-armv7l-3.9 2021-07-12T00:48:41,094 creating build/temp.linux-armv7l-3.9/cykdtree 2021-07-12T00:48:41,095 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Icykdtree -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c cykdtree/c_kdtree.cpp -o build/temp.linux-armv7l-3.9/cykdtree/c_kdtree.o -std=gnu++11 2021-07-12T00:48:41,187 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Icykdtree -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c cykdtree/c_utils.cpp -o build/temp.linux-armv7l-3.9/cykdtree/c_utils.o -std=gnu++11 2021-07-12T00:48:42,784 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Icykdtree -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c cykdtree/kdtree.cpp -o build/temp.linux-armv7l-3.9/cykdtree/kdtree.o -std=gnu++11 2021-07-12T00:48:43,093 In file included from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1969, 2021-07-12T00:48:43,093 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2021-07-12T00:48:43,093 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/arrayobject.h:4, 2021-07-12T00:48:43,093 from cykdtree/kdtree.cpp:656: 2021-07-12T00:48:43,094 /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2021-07-12T00:48:43,094 17 | #warning "Using deprecated NumPy API, disable it with " \ 2021-07-12T00:48:43,094 | ^~~~~~~ 2021-07-12T00:49:04,190 arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/cykdtree/c_kdtree.o build/temp.linux-armv7l-3.9/cykdtree/c_utils.o build/temp.linux-armv7l-3.9/cykdtree/kdtree.o -o build/lib.linux-armv7l-3.9/cykdtree/kdtree.cpython-39-arm-linux-gnueabihf.so 2021-07-12T00:49:04,559 building 'cykdtree.utils' extension 2021-07-12T00:49:04,560 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Icykdtree -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c cykdtree/c_utils.cpp -o build/temp.linux-armv7l-3.9/cykdtree/c_utils.o -std=gnu++11 2021-07-12T00:49:06,077 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Icykdtree -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c cykdtree/utils.cpp -o build/temp.linux-armv7l-3.9/cykdtree/utils.o -std=gnu++11 2021-07-12T00:49:06,364 In file included from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1969, 2021-07-12T00:49:06,364 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2021-07-12T00:49:06,364 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/arrayobject.h:4, 2021-07-12T00:49:06,364 from cykdtree/utils.cpp:655: 2021-07-12T00:49:06,365 /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2021-07-12T00:49:06,365 17 | #warning "Using deprecated NumPy API, disable it with " \ 2021-07-12T00:49:06,365 | ^~~~~~~ 2021-07-12T00:49:13,117 arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/cykdtree/c_utils.o build/temp.linux-armv7l-3.9/cykdtree/utils.o -o build/lib.linux-armv7l-3.9/cykdtree/utils.cpython-39-arm-linux-gnueabihf.so 2021-07-12T00:49:13,405 building 'cykdtree.parallel_kdtree' extension 2021-07-12T00:49:13,405 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Icykdtree -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c cykdtree/c_kdtree.cpp -o build/temp.linux-armv7l-3.9/cykdtree/c_kdtree.o -std=gnu++11 -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -pthread 2021-07-12T00:49:13,491 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Icykdtree -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c cykdtree/c_parallel_kdtree.cpp -o build/temp.linux-armv7l-3.9/cykdtree/c_parallel_kdtree.o -std=gnu++11 -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -pthread 2021-07-12T00:49:13,578 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Icykdtree -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c cykdtree/parallel_kdtree.cpp -o build/temp.linux-armv7l-3.9/cykdtree/parallel_kdtree.o -std=gnu++11 -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -pthread 2021-07-12T00:49:13,893 In file included from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1969, 2021-07-12T00:49:13,893 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2021-07-12T00:49:13,893 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/arrayobject.h:4, 2021-07-12T00:49:13,893 from cykdtree/parallel_kdtree.cpp:665: 2021-07-12T00:49:13,893 /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2021-07-12T00:49:13,894 17 | #warning "Using deprecated NumPy API, disable it with " \ 2021-07-12T00:49:13,894 | ^~~~~~~ 2021-07-12T00:49:23,750 arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/cykdtree/c_kdtree.o build/temp.linux-armv7l-3.9/cykdtree/c_parallel_kdtree.o build/temp.linux-armv7l-3.9/cykdtree/parallel_kdtree.o -o build/lib.linux-armv7l-3.9/cykdtree/parallel_kdtree.cpython-39-arm-linux-gnueabihf.so -pthread -L/usr/lib/arm-linux-gnueabihf/openmpi/lib -lmpi_cxx -lmpi 2021-07-12T00:49:24,126 installing to build/bdist.linux-armv7l/wheel 2021-07-12T00:49:24,127 running install 2021-07-12T00:49:24,129 running install_lib 2021-07-12T00:49:24,135 creating build/bdist.linux-armv7l 2021-07-12T00:49:24,135 creating build/bdist.linux-armv7l/wheel 2021-07-12T00:49:24,138 creating build/bdist.linux-armv7l/wheel/cykdtree 2021-07-12T00:49:24,139 copying build/lib.linux-armv7l-3.9/cykdtree/parallel_kdtree.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/cykdtree 2021-07-12T00:49:24,158 copying build/lib.linux-armv7l-3.9/cykdtree/__init__.py -> build/bdist.linux-armv7l/wheel/cykdtree 2021-07-12T00:49:24,161 copying build/lib.linux-armv7l-3.9/cykdtree/utils.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/cykdtree 2021-07-12T00:49:24,174 creating build/bdist.linux-armv7l/wheel/cykdtree/tests 2021-07-12T00:49:24,175 copying build/lib.linux-armv7l-3.9/cykdtree/tests/test_parallel_kdtree.py -> build/bdist.linux-armv7l/wheel/cykdtree/tests 2021-07-12T00:49:24,178 copying build/lib.linux-armv7l-3.9/cykdtree/tests/run_yt.py -> build/bdist.linux-armv7l/wheel/cykdtree/tests 2021-07-12T00:49:24,180 copying build/lib.linux-armv7l-3.9/cykdtree/tests/test_utils.py -> build/bdist.linux-armv7l/wheel/cykdtree/tests 2021-07-12T00:49:24,183 copying build/lib.linux-armv7l-3.9/cykdtree/tests/__init__.py -> build/bdist.linux-armv7l/wheel/cykdtree/tests 2021-07-12T00:49:24,186 copying build/lib.linux-armv7l-3.9/cykdtree/tests/test_kdtree.py -> build/bdist.linux-armv7l/wheel/cykdtree/tests 2021-07-12T00:49:24,189 copying build/lib.linux-armv7l-3.9/cykdtree/kdtree.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/cykdtree 2021-07-12T00:49:24,227 running install_data 2021-07-12T00:49:24,230 creating build/bdist.linux-armv7l/wheel/cykdtree-0.2_0.data 2021-07-12T00:49:24,231 creating build/bdist.linux-armv7l/wheel/cykdtree-0.2_0.data/data 2021-07-12T00:49:24,232 creating build/bdist.linux-armv7l/wheel/cykdtree-0.2_0.data/data/cykdtree 2021-07-12T00:49:24,233 copying cykdtree/kdtree.pyx -> build/bdist.linux-armv7l/wheel/cykdtree-0.2_0.data/data/cykdtree 2021-07-12T00:49:24,236 copying cykdtree/c_kdtree.hpp -> build/bdist.linux-armv7l/wheel/cykdtree-0.2_0.data/data/cykdtree 2021-07-12T00:49:24,238 copying cykdtree/utils.pyx -> build/bdist.linux-armv7l/wheel/cykdtree-0.2_0.data/data/cykdtree 2021-07-12T00:49:24,241 copying cykdtree/c_utils.hpp -> build/bdist.linux-armv7l/wheel/cykdtree-0.2_0.data/data/cykdtree 2021-07-12T00:49:24,243 copying cykdtree/parallel_kdtree.pyx -> build/bdist.linux-armv7l/wheel/cykdtree-0.2_0.data/data/cykdtree 2021-07-12T00:49:24,245 copying cykdtree/c_parallel_kdtree.hpp -> build/bdist.linux-armv7l/wheel/cykdtree-0.2_0.data/data/cykdtree 2021-07-12T00:49:24,247 running install_egg_info 2021-07-12T00:49:24,271 running egg_info 2021-07-12T00:49:24,272 writing cykdtree.egg-info/PKG-INFO 2021-07-12T00:49:24,274 writing dependency_links to cykdtree.egg-info/dependency_links.txt 2021-07-12T00:49:24,276 writing top-level names to cykdtree.egg-info/top_level.txt 2021-07-12T00:49:24,283 reading manifest file 'cykdtree.egg-info/SOURCES.txt' 2021-07-12T00:49:24,294 reading manifest template 'MANIFEST.in' 2021-07-12T00:49:24,337 adding license file 'LICENSE.txt' 2021-07-12T00:49:24,344 writing manifest file 'cykdtree.egg-info/SOURCES.txt' 2021-07-12T00:49:24,346 Copying cykdtree.egg-info to build/bdist.linux-armv7l/wheel/cykdtree-0.2.post0-py3.9.egg-info 2021-07-12T00:49:24,357 running install_scripts 2021-07-12T00:49:24,395 adding license file "LICENSE.txt" (matched pattern "LICEN[CS]E*") 2021-07-12T00:49:24,399 creating build/bdist.linux-armv7l/wheel/cykdtree-0.2.post0.dist-info/WHEEL 2021-07-12T00:49:24,402 creating '/tmp/pip-wheel-uexi6ft5/cykdtree-0.2.post0-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2021-07-12T00:49:24,405 adding 'cykdtree/__init__.py' 2021-07-12T00:49:24,710 adding 'cykdtree/kdtree.cpython-39-arm-linux-gnueabihf.so' 2021-07-12T00:49:24,866 adding 'cykdtree/parallel_kdtree.cpython-39-arm-linux-gnueabihf.so' 2021-07-12T00:49:24,953 adding 'cykdtree/utils.cpython-39-arm-linux-gnueabihf.so' 2021-07-12T00:49:24,958 adding 'cykdtree/tests/__init__.py' 2021-07-12T00:49:24,959 adding 'cykdtree/tests/run_yt.py' 2021-07-12T00:49:24,961 adding 'cykdtree/tests/test_kdtree.py' 2021-07-12T00:49:24,963 adding 'cykdtree/tests/test_parallel_kdtree.py' 2021-07-12T00:49:24,964 adding 'cykdtree/tests/test_utils.py' 2021-07-12T00:49:24,969 adding 'cykdtree-0.2_0.data/data/cykdtree/c_kdtree.hpp' 2021-07-12T00:49:24,972 adding 'cykdtree-0.2_0.data/data/cykdtree/c_parallel_kdtree.hpp' 2021-07-12T00:49:24,974 adding 'cykdtree-0.2_0.data/data/cykdtree/c_utils.hpp' 2021-07-12T00:49:24,976 adding 'cykdtree-0.2_0.data/data/cykdtree/kdtree.pyx' 2021-07-12T00:49:24,978 adding 'cykdtree-0.2_0.data/data/cykdtree/parallel_kdtree.pyx' 2021-07-12T00:49:24,980 adding 'cykdtree-0.2_0.data/data/cykdtree/utils.pyx' 2021-07-12T00:49:24,981 adding 'cykdtree-0.2.post0.dist-info/LICENSE.txt' 2021-07-12T00:49:24,983 adding 'cykdtree-0.2.post0.dist-info/METADATA' 2021-07-12T00:49:24,984 adding 'cykdtree-0.2.post0.dist-info/WHEEL' 2021-07-12T00:49:24,985 adding 'cykdtree-0.2.post0.dist-info/top_level.txt' 2021-07-12T00:49:24,986 adding 'cykdtree-0.2.post0.dist-info/RECORD' 2021-07-12T00:49:25,004 removing build/bdist.linux-armv7l/wheel 2021-07-12T00:49:25,161 Building wheel for cykdtree (setup.py): finished with status 'done' 2021-07-12T00:49:25,181 Created wheel for cykdtree: filename=cykdtree-0.2.post0-cp39-cp39-linux_armv7l.whl size=990334 sha256=e69ae398562505650c7dc62561f61e5e1a0c322428fe642ccbaa92603e984e72 2021-07-12T00:49:25,181 Stored in directory: /tmp/pip-ephem-wheel-cache-a291am3z/wheels/e6/e7/94/4ebc2b98d755675ba265311f1c6972babe87d3d15c97d8f2f4 2021-07-12T00:49:25,192 Successfully built cykdtree 2021-07-12T00:49:25,240 Removed build tracker: '/tmp/pip-req-tracker-ce8_wa4t'