2021-07-12T09:29:22,114 Created temporary directory: /tmp/pip-ephem-wheel-cache-gqitjzp7 2021-07-12T09:29:22,118 Created temporary directory: /tmp/pip-req-tracker-e0g55jbo 2021-07-12T09:29:22,118 Initialized build tracking at /tmp/pip-req-tracker-e0g55jbo 2021-07-12T09:29:22,118 Created build tracker: /tmp/pip-req-tracker-e0g55jbo 2021-07-12T09:29:22,118 Entered build tracker: /tmp/pip-req-tracker-e0g55jbo 2021-07-12T09:29:22,119 Created temporary directory: /tmp/pip-wheel-sekj8kcq 2021-07-12T09:29:22,148 1 location(s) to search for versions of classylss: 2021-07-12T09:29:22,148 * https://pypi.org/simple/classylss/ 2021-07-12T09:29:22,149 Fetching project page and analyzing links: https://pypi.org/simple/classylss/ 2021-07-12T09:29:22,149 Getting page https://pypi.org/simple/classylss/ 2021-07-12T09:29:22,151 Found index url https://pypi.org/simple 2021-07-12T09:29:22,253 Found link 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project 'classylss': discarding no candidates 2021-07-12T09:29:22,303 Collecting classylss==0.1.18 2021-07-12T09:29:22,304 Created temporary directory: /tmp/pip-unpack-6llzyby7 2021-07-12T09:29:25,694 Downloading classylss-0.1.18.tar.gz (10.8 MB) 2021-07-12T09:29:27,216 Added classylss==0.1.18 from https://files.pythonhosted.org/packages/7c/ce/90612e7d2b028bb2da13b009ac6820604a0a395ab1326454dc15cdabb55a/classylss-0.1.18.tar.gz#sha256=30e904b9d98e0074c86ed9897d05736936964675e356c5d8b1d1d4934a90791d to build tracker '/tmp/pip-req-tracker-e0g55jbo' 2021-07-12T09:29:27,217 Running setup.py (path:/tmp/pip-wheel-sekj8kcq/classylss_93ac2547ff954650be491b91f3914d36/setup.py) egg_info for package classylss 2021-07-12T09:29:27,218 Created temporary directory: /tmp/pip-pip-egg-info-iobknoo4 2021-07-12T09:29:27,218 Running command python setup.py egg_info 2021-07-12T09:29:29,509 /usr/local/lib/python3.9/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-sekj8kcq/classylss_93ac2547ff954650be491b91f3914d36/classylss/binding.pyx 2021-07-12T09:29:29,510 tree = Parsing.p_module(s, pxd, full_module_name) 2021-07-12T09:29:31,189 Error compiling Cython file: 2021-07-12T09:29:31,189 ------------------------------------------------------------ 2021-07-12T09:29:31,189 ... 2021-07-12T09:29:31,189 from classylss import get_data_files 2021-07-12T09:29:31,190 _DATA_FILES = get_data_files() 2021-07-12T09:29:31,190 from cclassy cimport * 2021-07-12T09:29:31,190 ^ 2021-07-12T09:29:31,190 ------------------------------------------------------------ 2021-07-12T09:29:31,190 classylss/binding.pyx:12:0: 'cclassy.pxd' not found 2021-07-12T09:29:31,191 Error compiling Cython file: 2021-07-12T09:29:31,191 ------------------------------------------------------------ 2021-07-12T09:29:31,191 ... 2021-07-12T09:29:31,191 unlikely value to this point 2021-07-12T09:29:31,191 """ 2021-07-12T09:29:31,191 pass 2021-07-12T09:29:31,192 cdef int _build_file_content(pars, file_content * fc) except -1: 2021-07-12T09:29:31,192 ^ 2021-07-12T09:29:31,192 ------------------------------------------------------------ 2021-07-12T09:29:31,192 classylss/binding.pyx:33:35: 'file_content' is not a type identifier 2021-07-12T09:29:31,192 Error compiling Cython file: 2021-07-12T09:29:31,193 ------------------------------------------------------------ 2021-07-12T09:29:31,193 ... 2021-07-12T09:29:31,193 int le 2021-07-12T09:29:31,193 cdef class ClassEngine: 2021-07-12T09:29:31,193 cdef precision pr 2021-07-12T09:29:31,193 ^ 2021-07-12T09:29:31,194 ------------------------------------------------------------ 2021-07-12T09:29:31,194 classylss/binding.pyx:140:9: 'precision' is not a type identifier 2021-07-12T09:29:31,194 Error compiling Cython file: 2021-07-12T09:29:31,194 ------------------------------------------------------------ 2021-07-12T09:29:31,194 ... 2021-07-12T09:29:31,195 cdef class ClassEngine: 2021-07-12T09:29:31,195 cdef precision pr 2021-07-12T09:29:31,195 cdef background ba 2021-07-12T09:29:31,195 ^ 2021-07-12T09:29:31,195 ------------------------------------------------------------ 2021-07-12T09:29:31,196 classylss/binding.pyx:141:9: 'background' is not a type identifier 2021-07-12T09:29:31,196 Error compiling Cython file: 2021-07-12T09:29:31,196 ------------------------------------------------------------ 2021-07-12T09:29:31,196 ... 2021-07-12T09:29:31,196 cdef class ClassEngine: 2021-07-12T09:29:31,197 cdef precision pr 2021-07-12T09:29:31,197 cdef background ba 2021-07-12T09:29:31,197 cdef thermo th 2021-07-12T09:29:31,197 ^ 2021-07-12T09:29:31,197 ------------------------------------------------------------ 2021-07-12T09:29:31,197 classylss/binding.pyx:142:9: 'thermo' is not a type identifier 2021-07-12T09:29:31,198 Error compiling Cython file: 2021-07-12T09:29:31,198 ------------------------------------------------------------ 2021-07-12T09:29:31,198 ... 2021-07-12T09:29:31,198 cdef class ClassEngine: 2021-07-12T09:29:31,198 cdef precision pr 2021-07-12T09:29:31,198 cdef background ba 2021-07-12T09:29:31,198 cdef thermo th 2021-07-12T09:29:31,198 cdef perturbs pt 2021-07-12T09:29:31,199 ^ 2021-07-12T09:29:31,199 ------------------------------------------------------------ 2021-07-12T09:29:31,199 classylss/binding.pyx:143:9: 'perturbs' is not a type identifier 2021-07-12T09:29:31,199 Error compiling Cython file: 2021-07-12T09:29:31,199 ------------------------------------------------------------ 2021-07-12T09:29:31,199 ... 2021-07-12T09:29:31,200 cdef precision pr 2021-07-12T09:29:31,200 cdef background ba 2021-07-12T09:29:31,200 cdef thermo th 2021-07-12T09:29:31,200 cdef perturbs pt 2021-07-12T09:29:31,200 cdef primordial pm 2021-07-12T09:29:31,200 ^ 2021-07-12T09:29:31,200 ------------------------------------------------------------ 2021-07-12T09:29:31,201 classylss/binding.pyx:144:9: 'primordial' is not a type identifier 2021-07-12T09:29:31,201 Error compiling Cython file: 2021-07-12T09:29:31,201 ------------------------------------------------------------ 2021-07-12T09:29:31,201 ... 2021-07-12T09:29:31,201 cdef precision pr 2021-07-12T09:29:31,201 cdef background ba 2021-07-12T09:29:31,201 cdef thermo th 2021-07-12T09:29:31,202 cdef perturbs pt 2021-07-12T09:29:31,202 cdef primordial pm 2021-07-12T09:29:31,202 cdef nonlinear nl 2021-07-12T09:29:31,202 ^ 2021-07-12T09:29:31,202 ------------------------------------------------------------ 2021-07-12T09:29:31,202 classylss/binding.pyx:145:9: 'nonlinear' is not a type identifier 2021-07-12T09:29:31,202 Error compiling Cython file: 2021-07-12T09:29:31,203 ------------------------------------------------------------ 2021-07-12T09:29:31,203 ... 2021-07-12T09:29:31,203 cdef background ba 2021-07-12T09:29:31,203 cdef thermo th 2021-07-12T09:29:31,203 cdef perturbs pt 2021-07-12T09:29:31,203 cdef primordial pm 2021-07-12T09:29:31,203 cdef nonlinear nl 2021-07-12T09:29:31,203 cdef transfers tr 2021-07-12T09:29:31,204 ^ 2021-07-12T09:29:31,204 ------------------------------------------------------------ 2021-07-12T09:29:31,204 classylss/binding.pyx:146:9: 'transfers' is not a type identifier 2021-07-12T09:29:31,204 Error compiling Cython file: 2021-07-12T09:29:31,204 ------------------------------------------------------------ 2021-07-12T09:29:31,204 ... 2021-07-12T09:29:31,205 cdef thermo th 2021-07-12T09:29:31,205 cdef perturbs pt 2021-07-12T09:29:31,205 cdef primordial pm 2021-07-12T09:29:31,205 cdef nonlinear nl 2021-07-12T09:29:31,205 cdef transfers tr 2021-07-12T09:29:31,205 cdef spectra sp 2021-07-12T09:29:31,205 ^ 2021-07-12T09:29:31,205 ------------------------------------------------------------ 2021-07-12T09:29:31,206 classylss/binding.pyx:147:9: 'spectra' is not a type identifier 2021-07-12T09:29:31,206 Error compiling Cython file: 2021-07-12T09:29:31,206 ------------------------------------------------------------ 2021-07-12T09:29:31,206 ... 2021-07-12T09:29:31,206 cdef perturbs pt 2021-07-12T09:29:31,206 cdef primordial pm 2021-07-12T09:29:31,206 cdef nonlinear nl 2021-07-12T09:29:31,206 cdef transfers tr 2021-07-12T09:29:31,207 cdef spectra sp 2021-07-12T09:29:31,207 cdef output op 2021-07-12T09:29:31,207 ^ 2021-07-12T09:29:31,207 ------------------------------------------------------------ 2021-07-12T09:29:31,207 classylss/binding.pyx:148:9: 'output' is not a type identifier 2021-07-12T09:29:31,207 Error compiling Cython file: 2021-07-12T09:29:31,207 ------------------------------------------------------------ 2021-07-12T09:29:31,208 ... 2021-07-12T09:29:31,208 cdef primordial pm 2021-07-12T09:29:31,208 cdef nonlinear nl 2021-07-12T09:29:31,208 cdef transfers tr 2021-07-12T09:29:31,208 cdef spectra sp 2021-07-12T09:29:31,208 cdef output op 2021-07-12T09:29:31,208 cdef lensing le 2021-07-12T09:29:31,208 ^ 2021-07-12T09:29:31,208 ------------------------------------------------------------ 2021-07-12T09:29:31,209 classylss/binding.pyx:149:9: 'lensing' is not a type identifier 2021-07-12T09:29:31,209 Error compiling Cython file: 2021-07-12T09:29:31,209 ------------------------------------------------------------ 2021-07-12T09:29:31,209 ... 2021-07-12T09:29:31,209 cdef transfers tr 2021-07-12T09:29:31,209 cdef spectra sp 2021-07-12T09:29:31,209 cdef output op 2021-07-12T09:29:31,210 cdef lensing le 2021-07-12T09:29:31,210 cdef ready_flags ready 2021-07-12T09:29:31,210 cdef file_content fc 2021-07-12T09:29:31,210 ^ 2021-07-12T09:29:31,210 ------------------------------------------------------------ 2021-07-12T09:29:31,210 classylss/binding.pyx:151:9: 'file_content' is not a type identifier 2021-07-12T09:29:31,211 Error compiling Cython file: 2021-07-12T09:29:31,211 ------------------------------------------------------------ 2021-07-12T09:29:31,211 ... 2021-07-12T09:29:31,211 self = cls(pars) 2021-07-12T09:29:31,211 return self 2021-07-12T09:29:31,211 cdef class Background: 2021-07-12T09:29:31,211 cdef ClassEngine engine 2021-07-12T09:29:31,211 cdef background * ba 2021-07-12T09:29:31,212 ^ 2021-07-12T09:29:31,212 ------------------------------------------------------------ 2021-07-12T09:29:31,212 classylss/binding.pyx:349:9: 'background' is not a type identifier 2021-07-12T09:29:31,212 Error compiling Cython file: 2021-07-12T09:29:31,212 ------------------------------------------------------------ 2021-07-12T09:29:31,212 ... 2021-07-12T09:29:31,212 """ 2021-07-12T09:29:31,213 return self.compute_for_z(z, self.ba.index_bg_f) 2021-07-12T09:29:31,213 cdef class Primordial: 2021-07-12T09:29:31,213 cdef ClassEngine engine 2021-07-12T09:29:31,213 cdef perturbs * pt 2021-07-12T09:29:31,213 ^ 2021-07-12T09:29:31,213 ------------------------------------------------------------ 2021-07-12T09:29:31,213 classylss/binding.pyx:487:9: 'perturbs' is not a type identifier 2021-07-12T09:29:31,214 Error compiling Cython file: 2021-07-12T09:29:31,214 ------------------------------------------------------------ 2021-07-12T09:29:31,214 ... 2021-07-12T09:29:31,214 return self.compute_for_z(z, self.ba.index_bg_f) 2021-07-12T09:29:31,214 cdef class Primordial: 2021-07-12T09:29:31,214 cdef ClassEngine engine 2021-07-12T09:29:31,214 cdef perturbs * pt 2021-07-12T09:29:31,215 cdef primordial * pm 2021-07-12T09:29:31,215 ^ 2021-07-12T09:29:31,215 ------------------------------------------------------------ 2021-07-12T09:29:31,215 classylss/binding.pyx:488:9: 'primordial' is not a type identifier 2021-07-12T09:29:31,215 Error compiling Cython file: 2021-07-12T09:29:31,215 ------------------------------------------------------------ 2021-07-12T09:29:31,215 ... 2021-07-12T09:29:31,216 cdef class Primordial: 2021-07-12T09:29:31,216 cdef ClassEngine engine 2021-07-12T09:29:31,216 cdef perturbs * pt 2021-07-12T09:29:31,216 cdef primordial * pm 2021-07-12T09:29:31,216 cdef background * ba 2021-07-12T09:29:31,216 ^ 2021-07-12T09:29:31,216 ------------------------------------------------------------ 2021-07-12T09:29:31,217 classylss/binding.pyx:489:9: 'background' is not a type identifier 2021-07-12T09:29:31,217 Error compiling Cython file: 2021-07-12T09:29:31,217 ------------------------------------------------------------ 2021-07-12T09:29:31,217 ... 2021-07-12T09:29:31,217 return data 2021-07-12T09:29:31,217 cdef class Spectra: 2021-07-12T09:29:31,217 cdef ClassEngine engine 2021-07-12T09:29:31,218 cdef spectra * sp 2021-07-12T09:29:31,218 ^ 2021-07-12T09:29:31,218 ------------------------------------------------------------ 2021-07-12T09:29:31,218 classylss/binding.pyx:572:9: 'spectra' is not a type identifier 2021-07-12T09:29:31,218 Error compiling Cython file: 2021-07-12T09:29:31,218 ------------------------------------------------------------ 2021-07-12T09:29:31,218 ... 2021-07-12T09:29:31,219 return data 2021-07-12T09:29:31,219 cdef class Spectra: 2021-07-12T09:29:31,219 cdef ClassEngine engine 2021-07-12T09:29:31,219 cdef spectra * sp 2021-07-12T09:29:31,219 cdef background * ba 2021-07-12T09:29:31,219 ^ 2021-07-12T09:29:31,219 ------------------------------------------------------------ 2021-07-12T09:29:31,220 classylss/binding.pyx:573:9: 'background' is not a type identifier 2021-07-12T09:29:31,220 Error compiling Cython file: 2021-07-12T09:29:31,220 ------------------------------------------------------------ 2021-07-12T09:29:31,220 ... 2021-07-12T09:29:31,220 cdef class Spectra: 2021-07-12T09:29:31,220 cdef ClassEngine engine 2021-07-12T09:29:31,221 cdef spectra * sp 2021-07-12T09:29:31,221 cdef background * ba 2021-07-12T09:29:31,221 cdef perturbs * pt 2021-07-12T09:29:31,221 ^ 2021-07-12T09:29:31,221 ------------------------------------------------------------ 2021-07-12T09:29:31,221 classylss/binding.pyx:574:9: 'perturbs' is not a type identifier 2021-07-12T09:29:31,222 Error compiling Cython file: 2021-07-12T09:29:31,222 ------------------------------------------------------------ 2021-07-12T09:29:31,222 ... 2021-07-12T09:29:31,222 cdef class Spectra: 2021-07-12T09:29:31,222 cdef ClassEngine engine 2021-07-12T09:29:31,222 cdef spectra * sp 2021-07-12T09:29:31,222 cdef background * ba 2021-07-12T09:29:31,222 cdef perturbs * pt 2021-07-12T09:29:31,223 cdef primordial * pm 2021-07-12T09:29:31,223 ^ 2021-07-12T09:29:31,223 ------------------------------------------------------------ 2021-07-12T09:29:31,223 classylss/binding.pyx:575:9: 'primordial' is not a type identifier 2021-07-12T09:29:31,223 Error compiling Cython file: 2021-07-12T09:29:31,223 ------------------------------------------------------------ 2021-07-12T09:29:31,223 ... 2021-07-12T09:29:31,224 cdef ClassEngine engine 2021-07-12T09:29:31,224 cdef spectra * sp 2021-07-12T09:29:31,224 cdef background * ba 2021-07-12T09:29:31,224 cdef perturbs * pt 2021-07-12T09:29:31,224 cdef primordial * pm 2021-07-12T09:29:31,224 cdef nonlinear * nl 2021-07-12T09:29:31,224 ^ 2021-07-12T09:29:31,224 ------------------------------------------------------------ 2021-07-12T09:29:31,225 classylss/binding.pyx:576:9: 'nonlinear' is not a type identifier 2021-07-12T09:29:31,225 Error compiling Cython file: 2021-07-12T09:29:31,225 ------------------------------------------------------------ 2021-07-12T09:29:31,225 ... 2021-07-12T09:29:31,225 ---------- 2021-07-12T09:29:31,225 level : level of modules to arrive. 2021-07-12T09:29:31,226 """ 2021-07-12T09:29:31,226 cdef file_content * fc = &self.fc 2021-07-12T09:29:31,226 ^ 2021-07-12T09:29:31,226 ------------------------------------------------------------ 2021-07-12T09:29:31,226 classylss/binding.pyx:184:13: 'file_content' is not a type identifier 2021-07-12T09:29:31,226 Error compiling Cython file: 2021-07-12T09:29:31,227 ------------------------------------------------------------ 2021-07-12T09:29:31,227 ... 2021-07-12T09:29:31,227 level : level of modules to arrive. 2021-07-12T09:29:31,227 """ 2021-07-12T09:29:31,227 cdef file_content * fc = &self.fc 2021-07-12T09:29:31,227 cdef ErrorMsg errmsg 2021-07-12T09:29:31,227 ^ 2021-07-12T09:29:31,228 ------------------------------------------------------------ 2021-07-12T09:29:31,228 classylss/binding.pyx:185:13: 'ErrorMsg' is not a type identifier 2021-07-12T09:29:33,659 Error compiling Cython file: 2021-07-12T09:29:33,659 ------------------------------------------------------------ 2021-07-12T09:29:33,659 ... 2021-07-12T09:29:33,659 out = np.empty(np.broadcast(k).shape, np.float64) 2021-07-12T09:29:33,659 #generate the iterator over the input and output arrays, does the same thing as 2021-07-12T09:29:33,659 cdef np.broadcast it = np.broadcast(k, out) 2021-07-12T09:29:33,660 cdef int index_md = 0 2021-07-12T09:29:33,660 cdef linear_or_logarithmic modeval 2021-07-12T09:29:33,660 ^ 2021-07-12T09:29:33,660 ------------------------------------------------------------ 2021-07-12T09:29:33,660 classylss/binding.pyx:520:13: 'linear_or_logarithmic' is not a type identifier 2021-07-12T09:29:33,668 Error compiling Cython file: 2021-07-12T09:29:33,669 ------------------------------------------------------------ 2021-07-12T09:29:33,669 ... 2021-07-12T09:29:33,669 """ 2021-07-12T09:29:33,669 if (not self.pt.has_density_transfers) and (not self.pt.has_velocity_transfers): 2021-07-12T09:29:33,669 raise RuntimeError("Perturbation is not computed") 2021-07-12T09:29:33,669 cdef FileName ic_suffix 2021-07-12T09:29:33,670 ^ 2021-07-12T09:29:33,670 ------------------------------------------------------------ 2021-07-12T09:29:33,670 classylss/binding.pyx:622:13: 'FileName' is not a type identifier 2021-07-12T09:29:33,935 Error compiling Cython file: 2021-07-12T09:29:33,935 ------------------------------------------------------------ 2021-07-12T09:29:33,935 ... 2021-07-12T09:29:33,936 cdef int _build_file_content(pars, file_content * fc) except -1: 2021-07-12T09:29:33,936 fc.size = 0 2021-07-12T09:29:33,936 fc.filename = malloc(sizeof(FileArg)) 2021-07-12T09:29:33,936 ^ 2021-07-12T09:29:33,936 ------------------------------------------------------------ 2021-07-12T09:29:33,936 classylss/binding.pyx:36:46: undeclared name not builtin: FileArg 2021-07-12T09:29:33,937 Error compiling Cython file: 2021-07-12T09:29:33,937 ------------------------------------------------------------ 2021-07-12T09:29:33,937 ... 2021-07-12T09:29:33,937 _pars.update(pars) 2021-07-12T09:29:33,937 pars = _pars 2021-07-12T09:29:33,938 fc.size = len(pars) 2021-07-12T09:29:33,938 fc.name = malloc(sizeof(FileArg)*len(pars)) 2021-07-12T09:29:33,938 ^ 2021-07-12T09:29:33,938 ------------------------------------------------------------ 2021-07-12T09:29:33,938 classylss/binding.pyx:51:15: 'FileArg' is not a type identifier 2021-07-12T09:29:33,938 Error compiling Cython file: 2021-07-12T09:29:33,939 ------------------------------------------------------------ 2021-07-12T09:29:33,939 ... 2021-07-12T09:29:33,939 _pars.update(pars) 2021-07-12T09:29:33,939 pars = _pars 2021-07-12T09:29:33,939 fc.size = len(pars) 2021-07-12T09:29:33,939 fc.name = malloc(sizeof(FileArg)*len(pars)) 2021-07-12T09:29:33,939 assert(fc.name!=NULL) 2021-07-12T09:29:33,939 ^ 2021-07-12T09:29:33,940 ------------------------------------------------------------ 2021-07-12T09:29:33,940 classylss/binding.pyx:52:18: Invalid types for '!=' (Python object, void *) 2021-07-12T09:29:33,940 Error compiling Cython file: 2021-07-12T09:29:33,940 ------------------------------------------------------------ 2021-07-12T09:29:33,940 ... 2021-07-12T09:29:33,941 fc.size = len(pars) 2021-07-12T09:29:33,941 fc.name = malloc(sizeof(FileArg)*len(pars)) 2021-07-12T09:29:33,941 assert(fc.name!=NULL) 2021-07-12T09:29:33,941 fc.value = malloc(sizeof(FileArg)*len(pars)) 2021-07-12T09:29:33,941 ^ 2021-07-12T09:29:33,941 ------------------------------------------------------------ 2021-07-12T09:29:33,942 classylss/binding.pyx:54:16: 'FileArg' is not a type identifier 2021-07-12T09:29:33,942 Error compiling Cython file: 2021-07-12T09:29:33,942 ------------------------------------------------------------ 2021-07-12T09:29:33,942 ... 2021-07-12T09:29:33,942 fc.size = len(pars) 2021-07-12T09:29:33,942 fc.name = malloc(sizeof(FileArg)*len(pars)) 2021-07-12T09:29:33,943 assert(fc.name!=NULL) 2021-07-12T09:29:33,943 fc.value = malloc(sizeof(FileArg)*len(pars)) 2021-07-12T09:29:33,943 assert(fc.value!=NULL) 2021-07-12T09:29:33,943 ^ 2021-07-12T09:29:33,943 ------------------------------------------------------------ 2021-07-12T09:29:33,943 classylss/binding.pyx:55:19: Invalid types for '!=' (Python object, void *) 2021-07-12T09:29:33,944 Error compiling Cython file: 2021-07-12T09:29:33,944 ------------------------------------------------------------ 2021-07-12T09:29:33,944 ... 2021-07-12T09:29:33,944 assert(fc.name!=NULL) 2021-07-12T09:29:33,944 fc.value = malloc(sizeof(FileArg)*len(pars)) 2021-07-12T09:29:33,944 assert(fc.value!=NULL) 2021-07-12T09:29:33,945 fc.read = malloc(sizeof(short)*len(pars)) 2021-07-12T09:29:33,945 ^ 2021-07-12T09:29:33,945 ------------------------------------------------------------ 2021-07-12T09:29:33,945 classylss/binding.pyx:57:14: Cannot convert 'short *' to Python object 2021-07-12T09:29:33,945 Error compiling Cython file: 2021-07-12T09:29:33,945 ------------------------------------------------------------ 2021-07-12T09:29:33,945 ... 2021-07-12T09:29:33,946 fc.value = malloc(sizeof(FileArg)*len(pars)) 2021-07-12T09:29:33,946 assert(fc.value!=NULL) 2021-07-12T09:29:33,946 fc.read = malloc(sizeof(short)*len(pars)) 2021-07-12T09:29:33,946 assert(fc.read!=NULL) 2021-07-12T09:29:33,946 ^ 2021-07-12T09:29:33,946 ------------------------------------------------------------ 2021-07-12T09:29:33,947 classylss/binding.pyx:58:18: Invalid types for '!=' (Python object, void *) 2021-07-12T09:29:33,947 Error compiling Cython file: 2021-07-12T09:29:33,947 ------------------------------------------------------------ 2021-07-12T09:29:33,947 ... 2021-07-12T09:29:33,947 dumcp = kk.encode() 2021-07-12T09:29:33,947 strncpy(fc.name[i], dumcp[:sizeof(FileArg)-1], sizeof(FileArg)) 2021-07-12T09:29:33,948 dumcp = str(pars[kk]).encode() 2021-07-12T09:29:33,948 strncpy(fc.value[i], dumcp[:sizeof(FileArg)-1], sizeof(FileArg)) 2021-07-12T09:29:33,948 fc.read[i] = _FALSE_ 2021-07-12T09:29:33,948 ^ 2021-07-12T09:29:33,948 ------------------------------------------------------------ 2021-07-12T09:29:33,948 classylss/binding.pyx:68:21: undeclared name not builtin: _FALSE_ 2021-07-12T09:29:33,952 Error compiling Cython file: 2021-07-12T09:29:33,953 ------------------------------------------------------------ 2021-07-12T09:29:33,953 ... 2021-07-12T09:29:33,953 def __init__(self, object pars={}): 2021-07-12T09:29:33,953 _build_file_content(pars, &self.fc) 2021-07-12T09:29:33,953 self.ready.fc = True 2021-07-12T09:29:33,953 def __dealloc__(self): 2021-07-12T09:29:33,953 if self.ready.fc: parser_free(&self.fc) 2021-07-12T09:29:33,954 ^ 2021-07-12T09:29:33,954 ------------------------------------------------------------ 2021-07-12T09:29:33,954 classylss/binding.pyx:161:26: undeclared name not builtin: parser_free 2021-07-12T09:29:33,954 Error compiling Cython file: 2021-07-12T09:29:33,954 ------------------------------------------------------------ 2021-07-12T09:29:33,954 ... 2021-07-12T09:29:33,955 _build_file_content(pars, &self.fc) 2021-07-12T09:29:33,955 self.ready.fc = True 2021-07-12T09:29:33,955 def __dealloc__(self): 2021-07-12T09:29:33,955 if self.ready.fc: parser_free(&self.fc) 2021-07-12T09:29:33,955 if self.ready.le: lensing_free(&self.le) 2021-07-12T09:29:33,955 ^ 2021-07-12T09:29:33,955 ------------------------------------------------------------ 2021-07-12T09:29:33,956 classylss/binding.pyx:162:26: undeclared name not builtin: lensing_free 2021-07-12T09:29:33,956 Error compiling Cython file: 2021-07-12T09:29:33,956 ------------------------------------------------------------ 2021-07-12T09:29:33,956 ... 2021-07-12T09:29:33,956 self.ready.fc = True 2021-07-12T09:29:33,956 def __dealloc__(self): 2021-07-12T09:29:33,957 if self.ready.fc: parser_free(&self.fc) 2021-07-12T09:29:33,957 if self.ready.le: lensing_free(&self.le) 2021-07-12T09:29:33,957 if self.ready.sp: spectra_free(&self.sp) 2021-07-12T09:29:33,957 ^ 2021-07-12T09:29:33,957 ------------------------------------------------------------ 2021-07-12T09:29:33,957 classylss/binding.pyx:163:26: undeclared name not builtin: spectra_free 2021-07-12T09:29:33,957 Error compiling Cython file: 2021-07-12T09:29:33,958 ------------------------------------------------------------ 2021-07-12T09:29:33,958 ... 2021-07-12T09:29:33,958 def __dealloc__(self): 2021-07-12T09:29:33,958 if self.ready.fc: parser_free(&self.fc) 2021-07-12T09:29:33,958 if self.ready.le: lensing_free(&self.le) 2021-07-12T09:29:33,958 if self.ready.sp: spectra_free(&self.sp) 2021-07-12T09:29:33,958 if self.ready.tr: transfer_free(&self.tr) 2021-07-12T09:29:33,959 ^ 2021-07-12T09:29:33,959 ------------------------------------------------------------ 2021-07-12T09:29:33,959 classylss/binding.pyx:164:26: undeclared name not builtin: transfer_free 2021-07-12T09:29:33,959 Error compiling Cython file: 2021-07-12T09:29:33,959 ------------------------------------------------------------ 2021-07-12T09:29:33,959 ... 2021-07-12T09:29:33,959 def __dealloc__(self): 2021-07-12T09:29:33,960 if self.ready.fc: parser_free(&self.fc) 2021-07-12T09:29:33,960 if self.ready.le: lensing_free(&self.le) 2021-07-12T09:29:33,960 if self.ready.sp: spectra_free(&self.sp) 2021-07-12T09:29:33,960 if self.ready.tr: transfer_free(&self.tr) 2021-07-12T09:29:33,960 if self.ready.nl: nonlinear_free(&self.nl) 2021-07-12T09:29:33,960 ^ 2021-07-12T09:29:33,960 ------------------------------------------------------------ 2021-07-12T09:29:33,960 classylss/binding.pyx:165:26: undeclared name not builtin: nonlinear_free 2021-07-12T09:29:33,961 Error compiling Cython file: 2021-07-12T09:29:33,961 ------------------------------------------------------------ 2021-07-12T09:29:33,961 ... 2021-07-12T09:29:33,961 if self.ready.fc: parser_free(&self.fc) 2021-07-12T09:29:33,961 if self.ready.le: lensing_free(&self.le) 2021-07-12T09:29:33,961 if self.ready.sp: spectra_free(&self.sp) 2021-07-12T09:29:33,961 if self.ready.tr: transfer_free(&self.tr) 2021-07-12T09:29:33,962 if self.ready.nl: nonlinear_free(&self.nl) 2021-07-12T09:29:33,962 if self.ready.pm: primordial_free(&self.pm) 2021-07-12T09:29:33,962 ^ 2021-07-12T09:29:33,962 ------------------------------------------------------------ 2021-07-12T09:29:33,962 classylss/binding.pyx:166:26: undeclared name not builtin: primordial_free 2021-07-12T09:29:33,962 Error compiling Cython file: 2021-07-12T09:29:33,962 ------------------------------------------------------------ 2021-07-12T09:29:33,963 ... 2021-07-12T09:29:33,963 if self.ready.le: lensing_free(&self.le) 2021-07-12T09:29:33,963 if self.ready.sp: spectra_free(&self.sp) 2021-07-12T09:29:33,963 if self.ready.tr: transfer_free(&self.tr) 2021-07-12T09:29:33,963 if self.ready.nl: nonlinear_free(&self.nl) 2021-07-12T09:29:33,963 if self.ready.pm: primordial_free(&self.pm) 2021-07-12T09:29:33,963 if self.ready.pt: perturb_free(&self.pt) 2021-07-12T09:29:33,963 ^ 2021-07-12T09:29:33,964 ------------------------------------------------------------ 2021-07-12T09:29:33,964 classylss/binding.pyx:167:26: undeclared name not builtin: perturb_free 2021-07-12T09:29:33,964 Error compiling Cython file: 2021-07-12T09:29:33,964 ------------------------------------------------------------ 2021-07-12T09:29:33,964 ... 2021-07-12T09:29:33,964 if self.ready.sp: spectra_free(&self.sp) 2021-07-12T09:29:33,964 if self.ready.tr: transfer_free(&self.tr) 2021-07-12T09:29:33,965 if self.ready.nl: nonlinear_free(&self.nl) 2021-07-12T09:29:33,965 if self.ready.pm: primordial_free(&self.pm) 2021-07-12T09:29:33,965 if self.ready.pt: perturb_free(&self.pt) 2021-07-12T09:29:33,965 if self.ready.th: thermodynamics_free(&self.th) 2021-07-12T09:29:33,965 ^ 2021-07-12T09:29:33,965 ------------------------------------------------------------ 2021-07-12T09:29:33,965 classylss/binding.pyx:168:26: undeclared name not builtin: thermodynamics_free 2021-07-12T09:29:33,966 Error compiling Cython file: 2021-07-12T09:29:33,966 ------------------------------------------------------------ 2021-07-12T09:29:33,966 ... 2021-07-12T09:29:33,966 if self.ready.tr: transfer_free(&self.tr) 2021-07-12T09:29:33,966 if self.ready.nl: nonlinear_free(&self.nl) 2021-07-12T09:29:33,966 if self.ready.pm: primordial_free(&self.pm) 2021-07-12T09:29:33,966 if self.ready.pt: perturb_free(&self.pt) 2021-07-12T09:29:33,966 if self.ready.th: thermodynamics_free(&self.th) 2021-07-12T09:29:33,967 if self.ready.ba: background_free(&self.ba) 2021-07-12T09:29:33,967 ^ 2021-07-12T09:29:33,967 ------------------------------------------------------------ 2021-07-12T09:29:33,967 classylss/binding.pyx:169:26: undeclared name not builtin: background_free 2021-07-12T09:29:33,967 Error compiling Cython file: 2021-07-12T09:29:33,967 ------------------------------------------------------------ 2021-07-12T09:29:33,968 ... 2021-07-12T09:29:33,968 # -------------------------------------------------------------------- 2021-07-12T09:29:33,968 # The input module should raise a ClassRuntimeError, because 2021-07-12T09:29:33,968 # non-understood parameters asked to the wrapper is a problematic 2021-07-12T09:29:33,968 # situation. 2021-07-12T09:29:33,968 if "input" in tasks: 2021-07-12T09:29:33,968 if input_init(fc, &self.pr, &self.ba, &self.th, 2021-07-12T09:29:33,968 ^ 2021-07-12T09:29:33,969 ------------------------------------------------------------ 2021-07-12T09:29:33,969 classylss/binding.pyx:197:15: undeclared name not builtin: input_init 2021-07-12T09:29:33,969 Error compiling Cython file: 2021-07-12T09:29:33,969 ------------------------------------------------------------ 2021-07-12T09:29:33,969 ... 2021-07-12T09:29:33,969 # non-understood parameters asked to the wrapper is a problematic 2021-07-12T09:29:33,969 # situation. 2021-07-12T09:29:33,970 if "input" in tasks: 2021-07-12T09:29:33,970 if input_init(fc, &self.pr, &self.ba, &self.th, 2021-07-12T09:29:33,970 &self.pt, &self.tr, &self.pm, &self.sp, 2021-07-12T09:29:33,970 &self.nl, &self.le, &self.op, errmsg) == _FAILURE_: 2021-07-12T09:29:33,970 ^ 2021-07-12T09:29:33,970 ------------------------------------------------------------ 2021-07-12T09:29:33,970 classylss/binding.pyx:199:67: undeclared name not builtin: _FAILURE_ 2021-07-12T09:29:33,971 Error compiling Cython file: 2021-07-12T09:29:33,971 ------------------------------------------------------------ 2021-07-12T09:29:33,971 ... 2021-07-12T09:29:33,971 # The following list of computation is straightforward. If the "_init" 2021-07-12T09:29:33,971 # methods fail, call `struct_cleanup` and raise a ClassBadValueError 2021-07-12T09:29:33,971 # with the error message from the faulty module of CLASS. 2021-07-12T09:29:33,972 if "background" in tasks and not self.ready.ba: 2021-07-12T09:29:33,972 if background_init(&(self.pr), &(self.ba)) == _FAILURE_: 2021-07-12T09:29:33,972 ^ 2021-07-12T09:29:33,972 ------------------------------------------------------------ 2021-07-12T09:29:33,972 classylss/binding.pyx:219:15: undeclared name not builtin: background_init 2021-07-12T09:29:33,972 Error compiling Cython file: 2021-07-12T09:29:33,972 ------------------------------------------------------------ 2021-07-12T09:29:33,973 ... 2021-07-12T09:29:33,973 if background_init(&(self.pr), &(self.ba)) == _FAILURE_: 2021-07-12T09:29:33,973 raise ClassBadValueError(self.ba.error_message.decode()) 2021-07-12T09:29:33,973 self.ready.ba = True 2021-07-12T09:29:33,973 if "thermodynamics" in tasks and not self.ready.th: 2021-07-12T09:29:33,973 if thermodynamics_init(&(self.pr), &(self.ba), 2021-07-12T09:29:33,973 ^ 2021-07-12T09:29:33,974 ------------------------------------------------------------ 2021-07-12T09:29:33,974 classylss/binding.pyx:224:15: undeclared name not builtin: thermodynamics_init 2021-07-12T09:29:33,974 Error compiling Cython file: 2021-07-12T09:29:33,974 ------------------------------------------------------------ 2021-07-12T09:29:33,974 ... 2021-07-12T09:29:33,974 &(self.th)) == _FAILURE_: 2021-07-12T09:29:33,975 raise ClassBadValueError(self.th.error_message.decode()) 2021-07-12T09:29:33,975 self.ready.th = True 2021-07-12T09:29:33,975 if "perturb" in tasks and not self.ready.pt: 2021-07-12T09:29:33,975 if perturb_init(&(self.pr), &(self.ba), 2021-07-12T09:29:33,975 ^ 2021-07-12T09:29:33,975 ------------------------------------------------------------ 2021-07-12T09:29:33,976 classylss/binding.pyx:230:15: undeclared name not builtin: perturb_init 2021-07-12T09:29:33,976 Error compiling Cython file: 2021-07-12T09:29:33,976 ------------------------------------------------------------ 2021-07-12T09:29:33,976 ... 2021-07-12T09:29:33,976 &(self.th), &(self.pt)) == _FAILURE_: 2021-07-12T09:29:33,976 raise ClassBadValueError(self.pt.error_message.decode()) 2021-07-12T09:29:33,976 self.ready.pt = True 2021-07-12T09:29:33,977 if "primordial" in tasks and not self.ready.pm: 2021-07-12T09:29:33,977 if primordial_init(&(self.pr), &(self.pt), 2021-07-12T09:29:33,977 ^ 2021-07-12T09:29:33,977 ------------------------------------------------------------ 2021-07-12T09:29:33,977 classylss/binding.pyx:236:15: undeclared name not builtin: primordial_init 2021-07-12T09:29:33,977 Error compiling Cython file: 2021-07-12T09:29:33,977 ------------------------------------------------------------ 2021-07-12T09:29:33,978 ... 2021-07-12T09:29:33,978 &(self.pm)) == _FAILURE_: 2021-07-12T09:29:33,978 raise ClassBadValueError(self.pm.error_message.decode()) 2021-07-12T09:29:33,978 self.ready.pm = True 2021-07-12T09:29:33,978 if "nonlinear" in tasks and not self.ready.nl: 2021-07-12T09:29:33,978 if nonlinear_init(&self.pr, &self.ba, &self.th, 2021-07-12T09:29:33,978 ^ 2021-07-12T09:29:33,979 ------------------------------------------------------------ 2021-07-12T09:29:33,979 classylss/binding.pyx:242:15: undeclared name not builtin: nonlinear_init 2021-07-12T09:29:33,979 Error compiling Cython file: 2021-07-12T09:29:33,979 ------------------------------------------------------------ 2021-07-12T09:29:33,979 ... 2021-07-12T09:29:33,979 &self.pt, &self.pm, &self.nl) == _FAILURE_: 2021-07-12T09:29:33,979 raise ClassBadValueError(self.nl.error_message.decode()) 2021-07-12T09:29:33,980 self.ready.nl = True 2021-07-12T09:29:33,980 if "transfer" in tasks and not self.ready.tr: 2021-07-12T09:29:33,980 if transfer_init(&(self.pr), &(self.ba), &(self.th), 2021-07-12T09:29:33,980 ^ 2021-07-12T09:29:33,980 ------------------------------------------------------------ 2021-07-12T09:29:33,980 classylss/binding.pyx:248:15: undeclared name not builtin: transfer_init 2021-07-12T09:29:33,981 Error compiling Cython file: 2021-07-12T09:29:33,981 ------------------------------------------------------------ 2021-07-12T09:29:33,981 ... 2021-07-12T09:29:33,981 &(self.pt), &(self.nl), &(self.tr)) == _FAILURE_: 2021-07-12T09:29:33,981 raise ClassBadValueError(self.tr.error_message.decode()) 2021-07-12T09:29:33,981 self.ready.tr = True 2021-07-12T09:29:33,981 if "spectra" in tasks and not self.ready.sp: 2021-07-12T09:29:33,982 if spectra_init(&(self.pr), &(self.ba), &(self.pt), 2021-07-12T09:29:33,982 ^ 2021-07-12T09:29:33,982 ------------------------------------------------------------ 2021-07-12T09:29:33,982 classylss/binding.pyx:254:15: undeclared name not builtin: spectra_init 2021-07-12T09:29:33,982 Error compiling Cython file: 2021-07-12T09:29:33,982 ------------------------------------------------------------ 2021-07-12T09:29:33,982 ... 2021-07-12T09:29:33,983 &(self.sp)) == _FAILURE_: 2021-07-12T09:29:33,983 raise ClassBadValueError(self.sp.error_message.decode()) 2021-07-12T09:29:33,983 self.ready.sp = True 2021-07-12T09:29:33,983 if "lensing" in tasks and not self.ready.le: 2021-07-12T09:29:33,983 if lensing_init(&(self.pr), &(self.pt), &(self.sp), 2021-07-12T09:29:33,983 ^ 2021-07-12T09:29:33,983 ------------------------------------------------------------ 2021-07-12T09:29:33,983 classylss/binding.pyx:261:15: undeclared name not builtin: lensing_init 2021-07-12T09:29:34,001 Error compiling Cython file: 2021-07-12T09:29:34,001 ------------------------------------------------------------ 2021-07-12T09:29:34,001 ... 2021-07-12T09:29:34,001 while np.PyArray_MultiIter_NOTDONE(it): 2021-07-12T09:29:34,001 #PyArray_MultiIter_DATA is used to access the pointers the iterator points to 2021-07-12T09:29:34,001 aval = (np.PyArray_MultiIter_DATA(it, 0))[0] 2021-07-12T09:29:34,002 if background_tau_of_z(self.ba,aval, &tau)==_FAILURE_: 2021-07-12T09:29:34,002 ^ 2021-07-12T09:29:34,002 ------------------------------------------------------------ 2021-07-12T09:29:34,002 classylss/binding.pyx:412:15: undeclared name not builtin: background_tau_of_z 2021-07-12T09:29:34,002 Error compiling Cython file: 2021-07-12T09:29:34,002 ------------------------------------------------------------ 2021-07-12T09:29:34,002 ... 2021-07-12T09:29:34,003 while np.PyArray_MultiIter_NOTDONE(it): 2021-07-12T09:29:34,003 #PyArray_MultiIter_DATA is used to access the pointers the iterator points to 2021-07-12T09:29:34,003 aval = (np.PyArray_MultiIter_DATA(it, 0))[0] 2021-07-12T09:29:34,003 if background_tau_of_z(self.ba,aval, &tau)==_FAILURE_: 2021-07-12T09:29:34,003 ^ 2021-07-12T09:29:34,003 ------------------------------------------------------------ 2021-07-12T09:29:34,004 classylss/binding.pyx:412:49: Cannot convert 'double *' to Python object 2021-07-12T09:29:34,004 Error compiling Cython file: 2021-07-12T09:29:34,004 ------------------------------------------------------------ 2021-07-12T09:29:34,004 ... 2021-07-12T09:29:34,004 aval = (np.PyArray_MultiIter_DATA(it, 0))[0] 2021-07-12T09:29:34,004 if background_tau_of_z(self.ba,aval, &tau)==_FAILURE_: 2021-07-12T09:29:34,005 raise ClassRuntimeError(self.ba.error_message.decode()) 2021-07-12T09:29:34,005 if background_at_tau(self.ba,tau,self.ba.long_info,self.ba.inter_normal,&last_index, &pvecback[0])==_FAILURE_: 2021-07-12T09:29:34,005 ^ 2021-07-12T09:29:34,005 ------------------------------------------------------------ 2021-07-12T09:29:34,005 classylss/binding.pyx:415:15: undeclared name not builtin: background_at_tau 2021-07-12T09:29:34,006 Error compiling Cython file: 2021-07-12T09:29:34,006 ------------------------------------------------------------ 2021-07-12T09:29:34,006 ... 2021-07-12T09:29:34,006 aval = (np.PyArray_MultiIter_DATA(it, 0))[0] 2021-07-12T09:29:34,006 if background_tau_of_z(self.ba,aval, &tau)==_FAILURE_: 2021-07-12T09:29:34,006 raise ClassRuntimeError(self.ba.error_message.decode()) 2021-07-12T09:29:34,006 if background_at_tau(self.ba,tau,self.ba.long_info,self.ba.inter_normal,&last_index, &pvecback[0])==_FAILURE_: 2021-07-12T09:29:34,007 ^ 2021-07-12T09:29:34,007 ------------------------------------------------------------ 2021-07-12T09:29:34,007 classylss/binding.pyx:415:84: Cannot convert 'int *' to Python object 2021-07-12T09:29:34,007 Error compiling Cython file: 2021-07-12T09:29:34,007 ------------------------------------------------------------ 2021-07-12T09:29:34,007 ... 2021-07-12T09:29:34,007 aval = (np.PyArray_MultiIter_DATA(it, 0))[0] 2021-07-12T09:29:34,008 if background_tau_of_z(self.ba,aval, &tau)==_FAILURE_: 2021-07-12T09:29:34,008 raise ClassRuntimeError(self.ba.error_message.decode()) 2021-07-12T09:29:34,008 if background_at_tau(self.ba,tau,self.ba.long_info,self.ba.inter_normal,&last_index, &pvecback[0])==_FAILURE_: 2021-07-12T09:29:34,008 ^ 2021-07-12T09:29:34,008 ------------------------------------------------------------ 2021-07-12T09:29:34,008 classylss/binding.pyx:415:97: Cannot convert 'double *' to Python object 2021-07-12T09:29:34,013 Error compiling Cython file: 2021-07-12T09:29:34,013 ------------------------------------------------------------ 2021-07-12T09:29:34,014 ... 2021-07-12T09:29:34,014 cdef np.broadcast it = np.broadcast(k, out) 2021-07-12T09:29:34,014 cdef int index_md = 0 2021-07-12T09:29:34,014 cdef linear_or_logarithmic modeval 2021-07-12T09:29:34,014 if mode.startswith('lin'): 2021-07-12T09:29:34,014 modeval = linear 2021-07-12T09:29:34,014 ^ 2021-07-12T09:29:34,014 ------------------------------------------------------------ 2021-07-12T09:29:34,015 classylss/binding.pyx:523:22: undeclared name not builtin: linear 2021-07-12T09:29:34,015 Error compiling Cython file: 2021-07-12T09:29:34,015 ------------------------------------------------------------ 2021-07-12T09:29:34,015 ... 2021-07-12T09:29:34,015 cdef linear_or_logarithmic modeval 2021-07-12T09:29:34,016 if mode.startswith('lin'): 2021-07-12T09:29:34,016 modeval = linear 2021-07-12T09:29:34,016 elif mode.startswith('log'): 2021-07-12T09:29:34,016 modval = logarithmic 2021-07-12T09:29:34,016 ^ 2021-07-12T09:29:34,016 ------------------------------------------------------------ 2021-07-12T09:29:34,016 classylss/binding.pyx:525:21: undeclared name not builtin: logarithmic 2021-07-12T09:29:34,017 Error compiling Cython file: 2021-07-12T09:29:34,017 ------------------------------------------------------------ 2021-07-12T09:29:34,017 ... 2021-07-12T09:29:34,017 while np.PyArray_MultiIter_NOTDONE(it): 2021-07-12T09:29:34,017 #PyArray_MultiIter_DATA is used to access the pointers the iterator points to 2021-07-12T09:29:34,017 aval = (np.PyArray_MultiIter_DATA(it, 0))[0] 2021-07-12T09:29:34,017 if _FAILURE_ == primordial_spectrum_at_k(self.pm, index_md, modeval, aval, 2021-07-12T09:29:34,018 ^ 2021-07-12T09:29:34,018 ------------------------------------------------------------ 2021-07-12T09:29:34,018 classylss/binding.pyx:534:32: undeclared name not builtin: primordial_spectrum_at_k 2021-07-12T09:29:34,018 Error compiling Cython file: 2021-07-12T09:29:34,018 ------------------------------------------------------------ 2021-07-12T09:29:34,018 ... 2021-07-12T09:29:34,019 #PyArray_MultiIter_DATA is used to access the pointers the iterator points to 2021-07-12T09:29:34,019 aval = (np.PyArray_MultiIter_DATA(it, 0))[0] 2021-07-12T09:29:34,019 if _FAILURE_ == primordial_spectrum_at_k(self.pm, index_md, modeval, aval, 2021-07-12T09:29:34,019 (np.PyArray_MultiIter_DATA(it, 1))): 2021-07-12T09:29:34,019 ^ 2021-07-12T09:29:34,019 ------------------------------------------------------------ 2021-07-12T09:29:34,020 classylss/binding.pyx:535:20: Cannot convert 'double *' to Python object 2021-07-12T09:29:34,020 Error compiling Cython file: 2021-07-12T09:29:34,020 ------------------------------------------------------------ 2021-07-12T09:29:34,020 ... 2021-07-12T09:29:34,020 primordial = {} 2021-07-12T09:29:34,020 cdef char titles[_MAXTITLESTRINGLENGTH_] 2021-07-12T09:29:34,021 memset(titles, 0, _MAXTITLESTRINGLENGTH_) 2021-07-12T09:29:34,021 if primordial_output_titles(self.pt, self.pm, titles)==_FAILURE_: 2021-07-12T09:29:34,021 ^ 2021-07-12T09:29:34,021 ------------------------------------------------------------ 2021-07-12T09:29:34,021 classylss/binding.pyx:558:11: undeclared name not builtin: primordial_output_titles 2021-07-12T09:29:34,022 Error compiling Cython file: 2021-07-12T09:29:34,022 ------------------------------------------------------------ 2021-07-12T09:29:34,022 ... 2021-07-12T09:29:34,022 dtype = _titles_to_dtype(titles) 2021-07-12T09:29:34,022 cdef np.ndarray data = np.zeros(self.pm.lnk_size, dtype=dtype) 2021-07-12T09:29:34,023 if primordial_output_data(self.pt, self.pm, len(dtype.fields), data.data)==_FAILURE_: 2021-07-12T09:29:34,023 ^ 2021-07-12T09:29:34,023 ------------------------------------------------------------ 2021-07-12T09:29:34,023 classylss/binding.pyx:565:11: undeclared name not builtin: primordial_output_data 2021-07-12T09:29:34,023 Error compiling Cython file: 2021-07-12T09:29:34,023 ------------------------------------------------------------ 2021-07-12T09:29:34,023 ... 2021-07-12T09:29:34,024 dtype = _titles_to_dtype(titles) 2021-07-12T09:29:34,024 cdef np.ndarray data = np.zeros(self.pm.lnk_size, dtype=dtype) 2021-07-12T09:29:34,024 if primordial_output_data(self.pt, self.pm, len(dtype.fields), data.data)==_FAILURE_: 2021-07-12T09:29:34,024 ^ 2021-07-12T09:29:34,024 ------------------------------------------------------------ 2021-07-12T09:29:34,025 classylss/binding.pyx:565:71: Cannot convert 'double *' to Python object 2021-07-12T09:29:34,029 Error compiling Cython file: 2021-07-12T09:29:34,029 ------------------------------------------------------------ 2021-07-12T09:29:34,029 ... 2021-07-12T09:29:34,030 cdef char titles[_MAXTITLESTRINGLENGTH_] 2021-07-12T09:29:34,030 memset(titles, 0, _MAXTITLESTRINGLENGTH_) 2021-07-12T09:29:34,030 if output_format == 'camb': 2021-07-12T09:29:34,030 outf = camb_format 2021-07-12T09:29:34,030 ^ 2021-07-12T09:29:34,030 ------------------------------------------------------------ 2021-07-12T09:29:34,030 classylss/binding.pyx:630:19: undeclared name not builtin: camb_format 2021-07-12T09:29:34,031 Error compiling Cython file: 2021-07-12T09:29:34,031 ------------------------------------------------------------ 2021-07-12T09:29:34,031 ... 2021-07-12T09:29:34,031 memset(titles, 0, _MAXTITLESTRINGLENGTH_) 2021-07-12T09:29:34,031 if output_format == 'camb': 2021-07-12T09:29:34,032 outf = camb_format 2021-07-12T09:29:34,032 else: 2021-07-12T09:29:34,032 outf = class_format 2021-07-12T09:29:34,032 ^ 2021-07-12T09:29:34,032 ------------------------------------------------------------ 2021-07-12T09:29:34,032 classylss/binding.pyx:632:19: undeclared name not builtin: class_format 2021-07-12T09:29:34,033 Error compiling Cython file: 2021-07-12T09:29:34,033 ------------------------------------------------------------ 2021-07-12T09:29:34,033 ... 2021-07-12T09:29:34,033 if output_format == 'camb': 2021-07-12T09:29:34,033 outf = camb_format 2021-07-12T09:29:34,033 else: 2021-07-12T09:29:34,033 outf = class_format 2021-07-12T09:29:34,033 if spectra_output_tk_titles(self.ba, self.pt, outf, titles)==_FAILURE_: 2021-07-12T09:29:34,034 ^ 2021-07-12T09:29:34,034 ------------------------------------------------------------ 2021-07-12T09:29:34,034 classylss/binding.pyx:634:11: undeclared name not builtin: spectra_output_tk_titles 2021-07-12T09:29:34,034 Error compiling Cython file: 2021-07-12T09:29:34,034 ------------------------------------------------------------ 2021-07-12T09:29:34,035 ... 2021-07-12T09:29:34,035 index_md = 0 2021-07-12T09:29:34,035 ic_num = self.sp.ic_size[index_md] 2021-07-12T09:29:34,035 cdef np.ndarray data = np.zeros((ic_num, self.sp.ln_k_size), dtype=dtype) 2021-07-12T09:29:34,035 if spectra_output_tk_data(self.ba, self.pt, self.sp, outf, z, len(dtype.fields), data.data)==_FAILURE_: 2021-07-12T09:29:34,035 ^ 2021-07-12T09:29:34,036 ------------------------------------------------------------ 2021-07-12T09:29:34,036 classylss/binding.pyx:645:11: undeclared name not builtin: spectra_output_tk_data 2021-07-12T09:29:34,036 Error compiling Cython file: 2021-07-12T09:29:34,036 ------------------------------------------------------------ 2021-07-12T09:29:34,036 ... 2021-07-12T09:29:34,036 index_md = 0 2021-07-12T09:29:34,036 ic_num = self.sp.ic_size[index_md] 2021-07-12T09:29:34,037 cdef np.ndarray data = np.zeros((ic_num, self.sp.ln_k_size), dtype=dtype) 2021-07-12T09:29:34,037 if spectra_output_tk_data(self.ba, self.pt, self.sp, outf, z, len(dtype.fields), data.data)==_FAILURE_: 2021-07-12T09:29:34,037 ^ 2021-07-12T09:29:34,037 ------------------------------------------------------------ 2021-07-12T09:29:34,037 classylss/binding.pyx:645:98: Cannot convert 'double *' to Python object 2021-07-12T09:29:34,038 Error compiling Cython file: 2021-07-12T09:29:34,038 ------------------------------------------------------------ 2021-07-12T09:29:34,038 ... 2021-07-12T09:29:34,038 raise ClassRuntimeError(self.sp.error_message.decode()) 2021-07-12T09:29:34,038 ic_keys = [] 2021-07-12T09:29:34,038 if ic_num > 1: 2021-07-12T09:29:34,038 for index_ic in range(ic_num): 2021-07-12T09:29:34,039 if spectra_firstline_and_ic_suffix(self.pt, index_ic, ic_info, ic_suffix)==_FAILURE_: 2021-07-12T09:29:34,039 ^ 2021-07-12T09:29:34,039 ------------------------------------------------------------ 2021-07-12T09:29:34,039 classylss/binding.pyx:651:19: undeclared name not builtin: spectra_firstline_and_ic_suffix 2021-07-12T09:29:34,039 Error compiling Cython file: 2021-07-12T09:29:34,039 ------------------------------------------------------------ 2021-07-12T09:29:34,039 ... 2021-07-12T09:29:34,040 there is an additional check to verify if output contains `mPk`, 2021-07-12T09:29:34,040 because otherwise a segfault will occur 2021-07-12T09:29:34,040 """ 2021-07-12T09:29:34,040 if lin or self.nl.method == 0: 2021-07-12T09:29:34,040 if spectra_pk_at_k_and_z(self.ba,self.pm,self.sp,k,z,pk,pk_ic) == _FAILURE_: 2021-07-12T09:29:34,040 ^ 2021-07-12T09:29:34,040 ------------------------------------------------------------ 2021-07-12T09:29:34,041 classylss/binding.pyx:678:15: undeclared name not builtin: spectra_pk_at_k_and_z 2021-07-12T09:29:34,041 Error compiling Cython file: 2021-07-12T09:29:34,041 ------------------------------------------------------------ 2021-07-12T09:29:34,041 ... 2021-07-12T09:29:34,041 there is an additional check to verify if output contains `mPk`, 2021-07-12T09:29:34,041 because otherwise a segfault will occur 2021-07-12T09:29:34,042 """ 2021-07-12T09:29:34,042 if lin or self.nl.method == 0: 2021-07-12T09:29:34,042 if spectra_pk_at_k_and_z(self.ba,self.pm,self.sp,k,z,pk,pk_ic) == _FAILURE_: 2021-07-12T09:29:34,042 ^ 2021-07-12T09:29:34,042 ------------------------------------------------------------ 2021-07-12T09:29:34,042 classylss/binding.pyx:678:65: Cannot convert 'double *' to Python object 2021-07-12T09:29:34,043 Error compiling Cython file: 2021-07-12T09:29:34,043 ------------------------------------------------------------ 2021-07-12T09:29:34,043 ... 2021-07-12T09:29:34,043 there is an additional check to verify if output contains `mPk`, 2021-07-12T09:29:34,043 because otherwise a segfault will occur 2021-07-12T09:29:34,043 """ 2021-07-12T09:29:34,043 if lin or self.nl.method == 0: 2021-07-12T09:29:34,043 if spectra_pk_at_k_and_z(self.ba,self.pm,self.sp,k,z,pk,pk_ic) == _FAILURE_: 2021-07-12T09:29:34,044 ^ 2021-07-12T09:29:34,044 ------------------------------------------------------------ 2021-07-12T09:29:34,044 classylss/binding.pyx:678:68: Cannot convert 'double *' to Python object 2021-07-12T09:29:34,044 Error compiling Cython file: 2021-07-12T09:29:34,044 ------------------------------------------------------------ 2021-07-12T09:29:34,044 ... 2021-07-12T09:29:34,045 """ 2021-07-12T09:29:34,045 if lin or self.nl.method == 0: 2021-07-12T09:29:34,045 if spectra_pk_at_k_and_z(self.ba,self.pm,self.sp,k,z,pk,pk_ic) == _FAILURE_: 2021-07-12T09:29:34,045 raise ClassRuntimeError(self.sp.error_message.decode()) 2021-07-12T09:29:34,045 else: 2021-07-12T09:29:34,045 if spectra_pk_nl_at_k_and_z(self.ba,self.pm,self.sp,k,z,pk) ==_FAILURE_: 2021-07-12T09:29:34,045 ^ 2021-07-12T09:29:34,045 ------------------------------------------------------------ 2021-07-12T09:29:34,046 classylss/binding.pyx:681:15: undeclared name not builtin: spectra_pk_nl_at_k_and_z 2021-07-12T09:29:34,046 Error compiling Cython file: 2021-07-12T09:29:34,046 ------------------------------------------------------------ 2021-07-12T09:29:34,046 ... 2021-07-12T09:29:34,046 """ 2021-07-12T09:29:34,046 if lin or self.nl.method == 0: 2021-07-12T09:29:34,046 if spectra_pk_at_k_and_z(self.ba,self.pm,self.sp,k,z,pk,pk_ic) == _FAILURE_: 2021-07-12T09:29:34,046 raise ClassRuntimeError(self.sp.error_message.decode()) 2021-07-12T09:29:34,047 else: 2021-07-12T09:29:34,047 if spectra_pk_nl_at_k_and_z(self.ba,self.pm,self.sp,k,z,pk) ==_FAILURE_: 2021-07-12T09:29:34,047 ^ 2021-07-12T09:29:34,047 ------------------------------------------------------------ 2021-07-12T09:29:34,047 classylss/binding.pyx:681:68: Cannot convert 'double *' to Python object 2021-07-12T09:29:36,578 Traceback (most recent call last): 2021-07-12T09:29:36,578 File "", line 1, in 2021-07-12T09:29:36,578 File "/tmp/pip-wheel-sekj8kcq/classylss_93ac2547ff954650be491b91f3914d36/setup.py", line 244, in 2021-07-12T09:29:36,579 ext_modules = cythonize([ 2021-07-12T09:29:36,579 File "/usr/local/lib/python3.9/dist-packages/Cython/Build/Dependencies.py", line 1102, in cythonize 2021-07-12T09:29:36,580 cythonize_one(*args) 2021-07-12T09:29:36,580 File "/usr/local/lib/python3.9/dist-packages/Cython/Build/Dependencies.py", line 1225, in cythonize_one 2021-07-12T09:29:36,581 raise CompileError(None, pyx_file) 2021-07-12T09:29:36,581 Cython.Compiler.Errors.CompileError: classylss/binding.pyx 2021-07-12T09:29:36,581 Compiling classylss/binding.pyx because it depends on /usr/local/lib/python3.9/dist-packages/Cython/Includes/libc/string.pxd. 2021-07-12T09:29:36,582 [1/1] Cythonizing classylss/binding.pyx 2021-07-12T09:29:36,981 WARNING: Discarding https://files.pythonhosted.org/packages/7c/ce/90612e7d2b028bb2da13b009ac6820604a0a395ab1326454dc15cdabb55a/classylss-0.1.18.tar.gz#sha256=30e904b9d98e0074c86ed9897d05736936964675e356c5d8b1d1d4934a90791d (from https://pypi.org/simple/classylss/). Command errored out with exit status 1: python setup.py egg_info Check the logs for full command output. 2021-07-12T09:29:36,983 ERROR: Could not find a version that satisfies the requirement classylss==0.1.18 (from versions: 0.1.0, 0.1.1, 0.1.2.dev0, 0.1.2, 0.1.3, 0.1.4, 0.1.5, 0.1.7, 0.1.8, 0.1.9.dev0, 0.1.9, 0.1.10, 0.1.11, 0.1.12, 0.1.13, 0.1.14, 0.1.15, 0.1.17, 0.1.18, 0.1.19, 0.1.99, 0.2.1, 0.2.2, 0.2.3, 0.2.4, 0.2.5, 0.2.6, 0.2.7, 0.2.8, 0.2.9) 2021-07-12T09:29:36,983 ERROR: No matching distribution found for classylss==0.1.18 2021-07-12T09:29:36,984 Exception information: 2021-07-12T09:29:36,984 Traceback (most recent call last): 2021-07-12T09:29:36,984 File "/usr/local/lib/python3.9/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 341, in resolve 2021-07-12T09:29:36,984 name, crit = self._merge_into_criterion(r, parent=None) 2021-07-12T09:29:36,984 File "/usr/local/lib/python3.9/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 173, in _merge_into_criterion 2021-07-12T09:29:36,984 raise RequirementsConflicted(criterion) 2021-07-12T09:29:36,984 pip._vendor.resolvelib.resolvers.RequirementsConflicted: Requirements conflict: SpecifierRequirement('classylss==0.1.18') 2021-07-12T09:29:36,984 2021-07-12T09:29:36,984 During handling of the above exception, another exception occurred: 2021-07-12T09:29:36,984 2021-07-12T09:29:36,984 Traceback (most recent call last): 2021-07-12T09:29:36,984 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/resolution/resolvelib/resolver.py", line 127, in resolve 2021-07-12T09:29:36,984 result = self._result = resolver.resolve( 2021-07-12T09:29:36,984 File "/usr/local/lib/python3.9/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 473, in resolve 2021-07-12T09:29:36,984 state = resolution.resolve(requirements, max_rounds=max_rounds) 2021-07-12T09:29:36,984 File "/usr/local/lib/python3.9/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 343, in resolve 2021-07-12T09:29:36,984 raise ResolutionImpossible(e.criterion.information) 2021-07-12T09:29:36,984 pip._vendor.resolvelib.resolvers.ResolutionImpossible: [RequirementInformation(requirement=SpecifierRequirement('classylss==0.1.18'), parent=None)] 2021-07-12T09:29:36,984 2021-07-12T09:29:36,984 The above exception was the direct cause of the following exception: 2021-07-12T09:29:36,984 2021-07-12T09:29:36,984 Traceback (most recent call last): 2021-07-12T09:29:36,984 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/cli/base_command.py", line 180, in _main 2021-07-12T09:29:36,984 status = self.run(options, args) 2021-07-12T09:29:36,984 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/cli/req_command.py", line 205, in wrapper 2021-07-12T09:29:36,984 return func(self, options, args) 2021-07-12T09:29:36,984 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/commands/wheel.py", line 142, in run 2021-07-12T09:29:36,984 requirement_set = resolver.resolve( 2021-07-12T09:29:36,984 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/resolution/resolvelib/resolver.py", line 136, in resolve 2021-07-12T09:29:36,984 raise error from e 2021-07-12T09:29:36,984 pip._internal.exceptions.DistributionNotFound: No matching distribution found for classylss==0.1.18 2021-07-12T09:29:36,988 Removed classylss==0.1.18 from https://files.pythonhosted.org/packages/7c/ce/90612e7d2b028bb2da13b009ac6820604a0a395ab1326454dc15cdabb55a/classylss-0.1.18.tar.gz#sha256=30e904b9d98e0074c86ed9897d05736936964675e356c5d8b1d1d4934a90791d from build tracker '/tmp/pip-req-tracker-e0g55jbo' 2021-07-12T09:29:36,989 Removed build tracker: '/tmp/pip-req-tracker-e0g55jbo'