2021-07-12T12:15:06,563 Created temporary directory: /tmp/pip-ephem-wheel-cache-oq8x9oef
2021-07-12T12:15:06,566 Created temporary directory: /tmp/pip-req-tracker-gdoxo__d
2021-07-12T12:15:06,566 Initialized build tracking at /tmp/pip-req-tracker-gdoxo__d
2021-07-12T12:15:06,567 Created build tracker: /tmp/pip-req-tracker-gdoxo__d
2021-07-12T12:15:06,567 Entered build tracker: /tmp/pip-req-tracker-gdoxo__d
2021-07-12T12:15:06,567 Created temporary directory: /tmp/pip-wheel-d7fu7xxf
2021-07-12T12:15:06,599 1 location(s) to search for versions of seqlib:
2021-07-12T12:15:06,599 * https://pypi.org/simple/seqlib/
2021-07-12T12:15:06,599 Fetching project page and analyzing links: https://pypi.org/simple/seqlib/
2021-07-12T12:15:06,600 Getting page https://pypi.org/simple/seqlib/
2021-07-12T12:15:06,601 Found index url https://pypi.org/simple
2021-07-12T12:15:06,926   Found link https://files.pythonhosted.org/packages/f4/6d/d435e3b52eac85931b422fb91c0072499fd6bf2407113b678a1fc7b45af3/seqlib-0.0.2.tar.gz#sha256=8cdebb37cfb507352026b08d97c84ca044d968c09b3cbe4a2fcec7a75745d108 (from https://pypi.org/simple/seqlib/), version: 0.0.2
2021-07-12T12:15:06,926   Found link https://files.pythonhosted.org/packages/92/c5/5e920fe60a3122bcf29e71c61e829f4282a80dd74be60fd0d0d41b199403/seqlib-0.0.3.tar.gz#sha256=1ef7389d3a2bf74472b77d77c28b5dd4b1f48488bb1a3f2ff5e64ea481003789 (from https://pypi.org/simple/seqlib/), version: 0.0.3
2021-07-12T12:15:06,943   Skipping link: none of the wheel's tags (cp36-cp36m-macosx_10_9_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/f0/04/ff9d870e2c374d0fa0b8127b0ab225c241fa6cbe28cb9cc58ad901fa0dd5/seqlib-0.0.5-cp36-cp36m-macosx_10_9_x86_64.whl#sha256=81e611485e82d85a1bc6f3107fe5c0cb0e2646490b54e51c38af8174a23dfd45 (from https://pypi.org/simple/seqlib/)
2021-07-12T12:15:06,944   Found link https://files.pythonhosted.org/packages/98/24/83eecf315d536649ef65bfa3f99cf3115674f5ab46217e6a8126256d96a2/seqlib-0.0.5.tar.gz#sha256=894079eb3845d680ced3358150c872508943af7c67d589bd42bce2f1d4a88a22 (from https://pypi.org/simple/seqlib/), version: 0.0.5
2021-07-12T12:15:06,944   Skipping link: none of the wheel's tags (cp36-cp36m-macosx_10_9_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/07/06/4177555c0421661b1d3d8a6d60c25df7527a4653792f76f6077a217f9e2b/seqlib-0.0.6-cp36-cp36m-macosx_10_9_x86_64.whl#sha256=3d06a237f1573c6f6c6b8150997d712f7b3f8ed5fdfb867ebe627329c5eb1148 (from https://pypi.org/simple/seqlib/)
2021-07-12T12:15:06,945   Found link https://files.pythonhosted.org/packages/62/35/8b843ab21b0a4cd669088097615d2a4008d683137485825f925bb3cb753b/seqlib-0.0.6.tar.gz#sha256=aa802c120213cd5b4a035bc57683766d766267e82a0ce918e019bc896c28a97e (from https://pypi.org/simple/seqlib/), version: 0.0.6
2021-07-12T12:15:06,945 Skipping link: not a file: https://pypi.org/simple/seqlib/
2021-07-12T12:15:06,946 Given no hashes to check 1 links for project 'seqlib': discarding no candidates
2021-07-12T12:15:06,965 Collecting seqlib==0.0.2
2021-07-12T12:15:06,967   Created temporary directory: /tmp/pip-unpack-gr3woqmq
2021-07-12T12:15:07,145   Downloading seqlib-0.0.2.tar.gz (5.0 kB)
2021-07-12T12:15:07,183   Added seqlib==0.0.2 from https://files.pythonhosted.org/packages/f4/6d/d435e3b52eac85931b422fb91c0072499fd6bf2407113b678a1fc7b45af3/seqlib-0.0.2.tar.gz#sha256=8cdebb37cfb507352026b08d97c84ca044d968c09b3cbe4a2fcec7a75745d108 to build tracker '/tmp/pip-req-tracker-gdoxo__d'
2021-07-12T12:15:07,184     Running setup.py (path:/tmp/pip-wheel-d7fu7xxf/seqlib_6aabab55fda64b538d3e398e9989bf39/setup.py) egg_info for package seqlib
2021-07-12T12:15:07,185     Created temporary directory: /tmp/pip-pip-egg-info-8hmw3cvg
2021-07-12T12:15:07,185     Running command python setup.py egg_info
2021-07-12T12:15:08,439     running egg_info
2021-07-12T12:15:08,441     creating /tmp/pip-pip-egg-info-8hmw3cvg/seqlib.egg-info
2021-07-12T12:15:08,442     writing /tmp/pip-pip-egg-info-8hmw3cvg/seqlib.egg-info/PKG-INFO
2021-07-12T12:15:08,445     writing dependency_links to /tmp/pip-pip-egg-info-8hmw3cvg/seqlib.egg-info/dependency_links.txt
2021-07-12T12:15:08,446     writing requirements to /tmp/pip-pip-egg-info-8hmw3cvg/seqlib.egg-info/requires.txt
2021-07-12T12:15:08,447     writing top-level names to /tmp/pip-pip-egg-info-8hmw3cvg/seqlib.egg-info/top_level.txt
2021-07-12T12:15:08,449     writing manifest file '/tmp/pip-pip-egg-info-8hmw3cvg/seqlib.egg-info/SOURCES.txt'
2021-07-12T12:15:08,626     reading manifest file '/tmp/pip-pip-egg-info-8hmw3cvg/seqlib.egg-info/SOURCES.txt'
2021-07-12T12:15:08,631     writing manifest file '/tmp/pip-pip-egg-info-8hmw3cvg/seqlib.egg-info/SOURCES.txt'
2021-07-12T12:15:08,721   Source in /tmp/pip-wheel-d7fu7xxf/seqlib_6aabab55fda64b538d3e398e9989bf39 has version 0.0.2, which satisfies requirement seqlib==0.0.2 from https://files.pythonhosted.org/packages/f4/6d/d435e3b52eac85931b422fb91c0072499fd6bf2407113b678a1fc7b45af3/seqlib-0.0.2.tar.gz#sha256=8cdebb37cfb507352026b08d97c84ca044d968c09b3cbe4a2fcec7a75745d108
2021-07-12T12:15:08,722   Removed seqlib==0.0.2 from https://files.pythonhosted.org/packages/f4/6d/d435e3b52eac85931b422fb91c0072499fd6bf2407113b678a1fc7b45af3/seqlib-0.0.2.tar.gz#sha256=8cdebb37cfb507352026b08d97c84ca044d968c09b3cbe4a2fcec7a75745d108 from build tracker '/tmp/pip-req-tracker-gdoxo__d'
2021-07-12T12:15:08,726 Created temporary directory: /tmp/pip-unpack-gsaubg6l
2021-07-12T12:15:08,726 Building wheels for collected packages: seqlib
2021-07-12T12:15:08,730   Created temporary directory: /tmp/pip-wheel-fqpn8n2p
2021-07-12T12:15:08,730   Building wheel for seqlib (setup.py): started
2021-07-12T12:15:08,731   Destination directory: /tmp/pip-wheel-fqpn8n2p
2021-07-12T12:15:08,731   Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-d7fu7xxf/seqlib_6aabab55fda64b538d3e398e9989bf39/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-d7fu7xxf/seqlib_6aabab55fda64b538d3e398e9989bf39/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-fqpn8n2p
2021-07-12T12:15:09,980   running bdist_wheel
2021-07-12T12:15:09,985   running build
2021-07-12T12:15:09,985   running build_py
2021-07-12T12:15:10,127   creating build
2021-07-12T12:15:10,127   creating build/lib.linux-armv7l-3.9
2021-07-12T12:15:10,128   creating build/lib.linux-armv7l-3.9/seqlib
2021-07-12T12:15:10,129   copying src/seqlib/__init__.py -> build/lib.linux-armv7l-3.9/seqlib
2021-07-12T12:15:10,131   running build_ext
2021-07-12T12:15:10,139   creating tmp
2021-07-12T12:15:10,139   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.9 -c /tmp/tmpj_7wakt3.cpp -o tmp/tmpj_7wakt3.o -std=c++14
2021-07-12T12:15:10,220   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.9 -c /tmp/tmp2shpd8q_.cpp -o tmp/tmp2shpd8q_.o -fvisibility=hidden
2021-07-12T12:15:10,304   error: [Errno 2] No such file or directory: '/tmp/pip-wheel-d7fu7xxf/seqlib_6aabab55fda64b538d3e398e9989bf39/lib/SeqLib/htslib/Makefile'
2021-07-12T12:15:10,389   Building wheel for seqlib (setup.py): finished with status 'error'
2021-07-12T12:15:10,390   ERROR: Failed building wheel for seqlib
2021-07-12T12:15:10,391   Running setup.py clean for seqlib
2021-07-12T12:15:10,391   Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-d7fu7xxf/seqlib_6aabab55fda64b538d3e398e9989bf39/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-d7fu7xxf/seqlib_6aabab55fda64b538d3e398e9989bf39/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' clean --all
2021-07-12T12:15:11,634   running clean
2021-07-12T12:15:11,636   removing 'build/lib.linux-armv7l-3.9' (and everything under it)
2021-07-12T12:15:11,638   'build/bdist.linux-armv7l' does not exist -- can't clean it
2021-07-12T12:15:11,639   'build/scripts-3.9' does not exist -- can't clean it
2021-07-12T12:15:11,639   removing 'build'
2021-07-12T12:15:11,708 Failed to build seqlib
2021-07-12T12:15:11,708 ERROR: Failed to build one or more wheels
2021-07-12T12:15:11,713 Exception information:
2021-07-12T12:15:11,713 Traceback (most recent call last):
2021-07-12T12:15:11,713   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/cli/base_command.py", line 180, in _main
2021-07-12T12:15:11,713     status = self.run(options, args)
2021-07-12T12:15:11,713   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/cli/req_command.py", line 205, in wrapper
2021-07-12T12:15:11,713     return func(self, options, args)
2021-07-12T12:15:11,713   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/commands/wheel.py", line 174, in run
2021-07-12T12:15:11,713     raise CommandError(
2021-07-12T12:15:11,713 pip._internal.exceptions.CommandError: Failed to build one or more wheels
2021-07-12T12:15:11,715 Removed build tracker: '/tmp/pip-req-tracker-gdoxo__d'