2021-07-12T13:51:55,329 Created temporary directory: /tmp/pip-ephem-wheel-cache-jvtilm5m 2021-07-12T13:51:55,332 Created temporary directory: /tmp/pip-req-tracker-skcbpllf 2021-07-12T13:51:55,332 Initialized build tracking at /tmp/pip-req-tracker-skcbpllf 2021-07-12T13:51:55,333 Created build tracker: /tmp/pip-req-tracker-skcbpllf 2021-07-12T13:51:55,333 Entered build tracker: /tmp/pip-req-tracker-skcbpllf 2021-07-12T13:51:55,333 Created temporary directory: /tmp/pip-wheel-jy2mfay5 2021-07-12T13:51:55,363 1 location(s) to search for versions of pyproct: 2021-07-12T13:51:55,363 * https://pypi.org/simple/pyproct/ 2021-07-12T13:51:55,364 Fetching project page and analyzing links: https://pypi.org/simple/pyproct/ 2021-07-12T13:51:55,364 Getting page https://pypi.org/simple/pyproct/ 2021-07-12T13:51:55,366 Found index url https://pypi.org/simple 2021-07-12T13:51:55,577 Found link https://files.pythonhosted.org/packages/52/1c/b4088ebb3c8ef5dae5a9fbf2780c32949f850f13210d441f0af834c10dc4/pyProCT-1.4.3.tar.gz#sha256=2554d1ce27e6cb5b056d33af63500463e1517fb1dc6e06aab0ba41f1afa2674b (from https://pypi.org/simple/pyproct/), version: 1.4.3 2021-07-12T13:51:55,578 Found link https://files.pythonhosted.org/packages/4d/01/69b5080ed36e50232cc14cf2f249efe052aea5b7ad07a9de32ff7d1f0637/pyProCT-1.5.1.tar.gz#sha256=127f30d231224c2a4179ade5402f1b29ea0ae7a57751bd5668e9b4b4b5057631 (from https://pypi.org/simple/pyproct/), version: 1.5.1 2021-07-12T13:51:55,578 Found link https://files.pythonhosted.org/packages/9b/3b/66b340743ed770d82f2bfc801d0cc962e6a21e7198d6f4b36f08556d5d7f/pyProCT-1.6.0.tar.gz#sha256=40b7f4b3e2f490cceaa42894de8dfbac17e36582e5dd6e11ecbd1682f7b99eaf (from https://pypi.org/simple/pyproct/), version: 1.6.0 2021-07-12T13:51:55,578 Found link https://files.pythonhosted.org/packages/2b/fc/a8bdf108133f848f24205b9ac98797fa553cbab59ab4dbd9392dfbcac130/pyProCT-1.7.0.tar.gz#sha256=8538ac78a014cb46bbe8b6df7b7810db729a0ebb2f2888f21f836af571ea2170 (from https://pypi.org/simple/pyproct/), version: 1.7.0 2021-07-12T13:51:55,578 Found link https://files.pythonhosted.org/packages/8c/64/691788ea3373605021028c9a320de36c42b371e2dd13dacf490d9bfd0ce8/pyProCT-1.7.1.tar.gz#sha256=5b2787f96cf0cc681cc84c3f4f2fb2be45780f9561c1d3c2a18612e7e6c67128 (from https://pypi.org/simple/pyproct/), version: 1.7.1 2021-07-12T13:51:55,579 Found link https://files.pythonhosted.org/packages/33/b3/e22e8fbacd034685cba0a1b33660d529d11a97e55a1894cbbe44afe2386c/pyProCT-1.7.2.tar.gz#sha256=806ca0fec13967b6bcc55305079a528ad4288a6a9528d5eb79dffc1869bd05d2 (from https://pypi.org/simple/pyproct/), version: 1.7.2 2021-07-12T13:51:55,579 Found link https://files.pythonhosted.org/packages/86/61/ac027e48e1feef08f5cf6e2752f1c67c4a6130de550c515dc62a03eceeb7/pyProCT-1.7.3.tar.gz#sha256=dbd5a6e834256977f1f0a8861765e6aa366166212b045c8afde89196cb5e908b (from https://pypi.org/simple/pyproct/), version: 1.7.3 2021-07-12T13:51:55,579 Skipping link: not a file: https://pypi.org/simple/pyproct/ 2021-07-12T13:51:55,597 Given no hashes to check 1 links for project 'pyproct': discarding no candidates 2021-07-12T13:51:55,616 Collecting pyproct==1.7.3 2021-07-12T13:51:55,618 Created temporary directory: /tmp/pip-unpack-qwofi3fy 2021-07-12T13:51:56,040 Downloading pyProCT-1.7.3.tar.gz (364 kB) 2021-07-12T13:51:56,486 Added pyproct==1.7.3 from https://files.pythonhosted.org/packages/86/61/ac027e48e1feef08f5cf6e2752f1c67c4a6130de550c515dc62a03eceeb7/pyProCT-1.7.3.tar.gz#sha256=dbd5a6e834256977f1f0a8861765e6aa366166212b045c8afde89196cb5e908b to build tracker '/tmp/pip-req-tracker-skcbpllf' 2021-07-12T13:51:56,487 Running setup.py (path:/tmp/pip-wheel-jy2mfay5/pyproct_cd8a2f6ee3c6463d849f3253ec0fe5b6/setup.py) egg_info for package pyproct 2021-07-12T13:51:56,487 Created temporary directory: /tmp/pip-pip-egg-info-8za2ns41 2021-07-12T13:51:56,488 Running command python setup.py egg_info 2021-07-12T13:51:57,821 running egg_info 2021-07-12T13:51:57,823 creating /tmp/pip-pip-egg-info-8za2ns41/pyProCT.egg-info 2021-07-12T13:51:57,825 writing /tmp/pip-pip-egg-info-8za2ns41/pyProCT.egg-info/PKG-INFO 2021-07-12T13:51:57,828 writing dependency_links to /tmp/pip-pip-egg-info-8za2ns41/pyProCT.egg-info/dependency_links.txt 2021-07-12T13:51:57,830 writing requirements to /tmp/pip-pip-egg-info-8za2ns41/pyProCT.egg-info/requires.txt 2021-07-12T13:51:57,831 writing top-level names to /tmp/pip-pip-egg-info-8za2ns41/pyProCT.egg-info/top_level.txt 2021-07-12T13:51:57,832 writing manifest file '/tmp/pip-pip-egg-info-8za2ns41/pyProCT.egg-info/SOURCES.txt' 2021-07-12T13:51:58,233 reading manifest file '/tmp/pip-pip-egg-info-8za2ns41/pyProCT.egg-info/SOURCES.txt' 2021-07-12T13:51:58,235 adding license file 'LICENSE' 2021-07-12T13:51:58,242 writing manifest file '/tmp/pip-pip-egg-info-8za2ns41/pyProCT.egg-info/SOURCES.txt' 2021-07-12T13:51:58,346 Source in /tmp/pip-wheel-jy2mfay5/pyproct_cd8a2f6ee3c6463d849f3253ec0fe5b6 has version 1.7.3, which satisfies requirement pyproct==1.7.3 from https://files.pythonhosted.org/packages/86/61/ac027e48e1feef08f5cf6e2752f1c67c4a6130de550c515dc62a03eceeb7/pyProCT-1.7.3.tar.gz#sha256=dbd5a6e834256977f1f0a8861765e6aa366166212b045c8afde89196cb5e908b 2021-07-12T13:51:58,347 Removed pyproct==1.7.3 from https://files.pythonhosted.org/packages/86/61/ac027e48e1feef08f5cf6e2752f1c67c4a6130de550c515dc62a03eceeb7/pyProCT-1.7.3.tar.gz#sha256=dbd5a6e834256977f1f0a8861765e6aa366166212b045c8afde89196cb5e908b from build tracker '/tmp/pip-req-tracker-skcbpllf' 2021-07-12T13:51:58,353 Created temporary directory: /tmp/pip-unpack-cn3a8fmr 2021-07-12T13:51:58,353 Building wheels for collected packages: pyproct 2021-07-12T13:51:58,358 Created temporary directory: /tmp/pip-wheel-zxy03o_i 2021-07-12T13:51:58,358 Building wheel for pyproct (setup.py): started 2021-07-12T13:51:58,358 Destination directory: /tmp/pip-wheel-zxy03o_i 2021-07-12T13:51:58,359 Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-jy2mfay5/pyproct_cd8a2f6ee3c6463d849f3253ec0fe5b6/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-jy2mfay5/pyproct_cd8a2f6ee3c6463d849f3253ec0fe5b6/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-zxy03o_i 2021-07-12T13:51:59,855 running bdist_wheel 2021-07-12T13:52:00,058 running build 2021-07-12T13:52:00,058 running build_py 2021-07-12T13:52:00,192 creating build 2021-07-12T13:52:00,192 creating build/lib.linux-armv7l-3.9 2021-07-12T13:52:00,193 creating build/lib.linux-armv7l-3.9/pyproct 2021-07-12T13:52:00,194 copying pyproct/main.py -> build/lib.linux-armv7l-3.9/pyproct 2021-07-12T13:52:00,196 copying pyproct/__init__.py -> build/lib.linux-armv7l-3.9/pyproct 2021-07-12T13:52:00,198 creating build/lib.linux-armv7l-3.9/pyproct/clustering 2021-07-12T13:52:00,199 copying pyproct/clustering/cluster.py -> build/lib.linux-armv7l-3.9/pyproct/clustering 2021-07-12T13:52:00,201 copying pyproct/clustering/__init__.py -> build/lib.linux-armv7l-3.9/pyproct/clustering 2021-07-12T13:52:00,203 copying pyproct/clustering/clustering.py -> build/lib.linux-armv7l-3.9/pyproct/clustering 2021-07-12T13:52:00,206 creating build/lib.linux-armv7l-3.9/pyproct/clustering/algorithms 2021-07-12T13:52:00,206 copying pyproct/clustering/algorithms/__init__.py -> build/lib.linux-armv7l-3.9/pyproct/clustering/algorithms 2021-07-12T13:52:00,209 creating build/lib.linux-armv7l-3.9/pyproct/clustering/algorithms/dbscan 2021-07-12T13:52:00,210 copying pyproct/clustering/algorithms/dbscan/__init__.py -> build/lib.linux-armv7l-3.9/pyproct/clustering/algorithms/dbscan 2021-07-12T13:52:00,211 copying pyproct/clustering/algorithms/dbscan/parametersGeneration.py -> build/lib.linux-armv7l-3.9/pyproct/clustering/algorithms/dbscan 2021-07-12T13:52:00,213 copying pyproct/clustering/algorithms/dbscan/dbscanAlgorithm.py -> build/lib.linux-armv7l-3.9/pyproct/clustering/algorithms/dbscan 2021-07-12T13:52:00,215 copying pyproct/clustering/algorithms/dbscan/dbscanTools.py -> build/lib.linux-armv7l-3.9/pyproct/clustering/algorithms/dbscan 2021-07-12T13:52:00,217 creating build/lib.linux-armv7l-3.9/pyproct/clustering/algorithms/dbscan/cython 2021-07-12T13:52:00,218 copying pyproct/clustering/algorithms/dbscan/cython/__init__.py -> build/lib.linux-armv7l-3.9/pyproct/clustering/algorithms/dbscan/cython 2021-07-12T13:52:00,219 copying pyproct/clustering/algorithms/dbscan/cython/setup.py -> build/lib.linux-armv7l-3.9/pyproct/clustering/algorithms/dbscan/cython 2021-07-12T13:52:00,222 creating build/lib.linux-armv7l-3.9/pyproct/clustering/algorithms/gromos 2021-07-12T13:52:00,223 copying pyproct/clustering/algorithms/gromos/__init__.py -> build/lib.linux-armv7l-3.9/pyproct/clustering/algorithms/gromos 2021-07-12T13:52:00,224 copying pyproct/clustering/algorithms/gromos/parametersGeneration.py -> build/lib.linux-armv7l-3.9/pyproct/clustering/algorithms/gromos 2021-07-12T13:52:00,226 copying pyproct/clustering/algorithms/gromos/gromosAlgorithm.py -> build/lib.linux-armv7l-3.9/pyproct/clustering/algorithms/gromos 2021-07-12T13:52:00,228 copying pyproct/clustering/algorithms/gromos/gromosAlgorithmTools.py -> build/lib.linux-armv7l-3.9/pyproct/clustering/algorithms/gromos 2021-07-12T13:52:00,231 creating build/lib.linux-armv7l-3.9/pyproct/clustering/algorithms/hierarchical 2021-07-12T13:52:00,231 copying pyproct/clustering/algorithms/hierarchical/hierarchicalAlgorithm.py -> build/lib.linux-armv7l-3.9/pyproct/clustering/algorithms/hierarchical 2021-07-12T13:52:00,233 copying pyproct/clustering/algorithms/hierarchical/__init__.py -> build/lib.linux-armv7l-3.9/pyproct/clustering/algorithms/hierarchical 2021-07-12T13:52:00,235 copying pyproct/clustering/algorithms/hierarchical/parametersGeneration.py -> build/lib.linux-armv7l-3.9/pyproct/clustering/algorithms/hierarchical 2021-07-12T13:52:00,237 copying pyproct/clustering/algorithms/hierarchical/hierarchicalTools.py -> build/lib.linux-armv7l-3.9/pyproct/clustering/algorithms/hierarchical 2021-07-12T13:52:00,240 creating build/lib.linux-armv7l-3.9/pyproct/clustering/algorithms/kmedoids 2021-07-12T13:52:00,240 copying pyproct/clustering/algorithms/kmedoids/kMedoidsAlgorithm.py -> build/lib.linux-armv7l-3.9/pyproct/clustering/algorithms/kmedoids 2021-07-12T13:52:00,243 copying pyproct/clustering/algorithms/kmedoids/__init__.py -> build/lib.linux-armv7l-3.9/pyproct/clustering/algorithms/kmedoids 2021-07-12T13:52:00,245 copying pyproct/clustering/algorithms/kmedoids/parametersGeneration.py -> build/lib.linux-armv7l-3.9/pyproct/clustering/algorithms/kmedoids 2021-07-12T13:52:00,247 creating build/lib.linux-armv7l-3.9/pyproct/clustering/algorithms/random 2021-07-12T13:52:00,248 copying pyproct/clustering/algorithms/random/RandomAlgorithm.py -> build/lib.linux-armv7l-3.9/pyproct/clustering/algorithms/random 2021-07-12T13:52:00,250 copying pyproct/clustering/algorithms/random/__init__.py -> build/lib.linux-armv7l-3.9/pyproct/clustering/algorithms/random 2021-07-12T13:52:00,252 copying pyproct/clustering/algorithms/random/parametersGeneration.py -> build/lib.linux-armv7l-3.9/pyproct/clustering/algorithms/random 2021-07-12T13:52:00,253 copying pyproct/clustering/algorithms/random/FakeDistributionRandomAlgorithm.py -> build/lib.linux-armv7l-3.9/pyproct/clustering/algorithms/random 2021-07-12T13:52:00,256 creating build/lib.linux-armv7l-3.9/pyproct/clustering/algorithms/spectral 2021-07-12T13:52:00,257 copying pyproct/clustering/algorithms/spectral/__init__.py -> build/lib.linux-armv7l-3.9/pyproct/clustering/algorithms/spectral 2021-07-12T13:52:00,258 copying pyproct/clustering/algorithms/spectral/parametersGeneration.py -> build/lib.linux-armv7l-3.9/pyproct/clustering/algorithms/spectral 2021-07-12T13:52:00,260 copying pyproct/clustering/algorithms/spectral/spectralClusteringAlgorithm.py -> build/lib.linux-armv7l-3.9/pyproct/clustering/algorithms/spectral 2021-07-12T13:52:00,263 creating build/lib.linux-armv7l-3.9/pyproct/clustering/algorithms/spectral/cython 2021-07-12T13:52:00,264 copying pyproct/clustering/algorithms/spectral/cython/__init__.py -> build/lib.linux-armv7l-3.9/pyproct/clustering/algorithms/spectral/cython 2021-07-12T13:52:00,266 copying pyproct/clustering/algorithms/spectral/cython/setup.py -> build/lib.linux-armv7l-3.9/pyproct/clustering/algorithms/spectral/cython 2021-07-12T13:52:00,269 creating build/lib.linux-armv7l-3.9/pyproct/clustering/evaluation 2021-07-12T13:52:00,269 copying pyproct/clustering/evaluation/__init__.py -> build/lib.linux-armv7l-3.9/pyproct/clustering/evaluation 2021-07-12T13:52:00,272 creating build/lib.linux-armv7l-3.9/pyproct/clustering/evaluation/analysis 2021-07-12T13:52:00,273 copying pyproct/clustering/evaluation/analysis/analysis.py -> build/lib.linux-armv7l-3.9/pyproct/clustering/evaluation/analysis 2021-07-12T13:52:00,275 copying pyproct/clustering/evaluation/analysis/__init__.py -> build/lib.linux-armv7l-3.9/pyproct/clustering/evaluation/analysis 2021-07-12T13:52:00,277 copying pyproct/clustering/evaluation/analysis/analysisRunner.py -> build/lib.linux-armv7l-3.9/pyproct/clustering/evaluation/analysis 2021-07-12T13:52:00,279 copying pyproct/clustering/evaluation/analysis/analysisPopulator.py -> build/lib.linux-armv7l-3.9/pyproct/clustering/evaluation/analysis 2021-07-12T13:52:00,283 creating build/lib.linux-armv7l-3.9/pyproct/clustering/evaluation/metrics 2021-07-12T13:52:00,284 copying pyproct/clustering/evaluation/metrics/__init__.py -> build/lib.linux-armv7l-3.9/pyproct/clustering/evaluation/metrics 2021-07-12T13:52:00,285 copying pyproct/clustering/evaluation/metrics/common.py -> build/lib.linux-armv7l-3.9/pyproct/clustering/evaluation/metrics 2021-07-12T13:52:00,287 copying pyproct/clustering/evaluation/metrics/compactness.py -> build/lib.linux-armv7l-3.9/pyproct/clustering/evaluation/metrics 2021-07-12T13:52:00,289 copying pyproct/clustering/evaluation/metrics/dunn.py -> build/lib.linux-armv7l-3.9/pyproct/clustering/evaluation/metrics 2021-07-12T13:52:00,291 copying pyproct/clustering/evaluation/metrics/gaussianSeparation.py -> build/lib.linux-armv7l-3.9/pyproct/clustering/evaluation/metrics 2021-07-12T13:52:00,293 copying pyproct/clustering/evaluation/metrics/calinskiHarabasz.py -> build/lib.linux-armv7l-3.9/pyproct/clustering/evaluation/metrics 2021-07-12T13:52:00,297 copying pyproct/clustering/evaluation/metrics/pcaMetrics.py -> build/lib.linux-armv7l-3.9/pyproct/clustering/evaluation/metrics 2021-07-12T13:52:00,300 copying pyproct/clustering/evaluation/metrics/separation.py -> build/lib.linux-armv7l-3.9/pyproct/clustering/evaluation/metrics 2021-07-12T13:52:00,302 copying pyproct/clustering/evaluation/metrics/daviesBouldin.py -> build/lib.linux-armv7l-3.9/pyproct/clustering/evaluation/metrics 2021-07-12T13:52:00,306 creating build/lib.linux-armv7l-3.9/pyproct/clustering/evaluation/metrics/cython 2021-07-12T13:52:00,306 copying pyproct/clustering/evaluation/metrics/cython/__init__.py -> build/lib.linux-armv7l-3.9/pyproct/clustering/evaluation/metrics/cython 2021-07-12T13:52:00,308 copying pyproct/clustering/evaluation/metrics/cython/setup.py -> build/lib.linux-armv7l-3.9/pyproct/clustering/evaluation/metrics/cython 2021-07-12T13:52:00,311 creating build/lib.linux-armv7l-3.9/pyproct/clustering/evaluation/metrics/cython/graph 2021-07-12T13:52:00,311 copying pyproct/clustering/evaluation/metrics/cython/graph/__init__.py -> build/lib.linux-armv7l-3.9/pyproct/clustering/evaluation/metrics/cython/graph 2021-07-12T13:52:00,314 creating build/lib.linux-armv7l-3.9/pyproct/clustering/filtering 2021-07-12T13:52:00,315 copying pyproct/clustering/filtering/clusteringFilter.py -> build/lib.linux-armv7l-3.9/pyproct/clustering/filtering 2021-07-12T13:52:00,318 copying pyproct/clustering/filtering/__init__.py -> build/lib.linux-armv7l-3.9/pyproct/clustering/filtering 2021-07-12T13:52:00,320 creating build/lib.linux-armv7l-3.9/pyproct/clustering/protocol 2021-07-12T13:52:00,321 copying pyproct/clustering/protocol/__init__.py -> build/lib.linux-armv7l-3.9/pyproct/clustering/protocol 2021-07-12T13:52:00,324 copying pyproct/clustering/protocol/protocol.py -> build/lib.linux-armv7l-3.9/pyproct/clustering/protocol 2021-07-12T13:52:00,328 creating build/lib.linux-armv7l-3.9/pyproct/clustering/protocol/exploration 2021-07-12T13:52:00,329 copying pyproct/clustering/protocol/exploration/__init__.py -> build/lib.linux-armv7l-3.9/pyproct/clustering/protocol/exploration 2021-07-12T13:52:00,330 copying pyproct/clustering/protocol/exploration/clusteringExplorer.py -> build/lib.linux-armv7l-3.9/pyproct/clustering/protocol/exploration 2021-07-12T13:52:00,333 copying pyproct/clustering/protocol/exploration/algorithmRunParametersGenerator.py -> build/lib.linux-armv7l-3.9/pyproct/clustering/protocol/exploration 2021-07-12T13:52:00,336 creating build/lib.linux-armv7l-3.9/pyproct/clustering/protocol/refinement 2021-07-12T13:52:00,336 copying pyproct/clustering/protocol/refinement/__init__.py -> build/lib.linux-armv7l-3.9/pyproct/clustering/protocol/refinement 2021-07-12T13:52:00,338 copying pyproct/clustering/protocol/refinement/Refiner.py -> build/lib.linux-armv7l-3.9/pyproct/clustering/protocol/refinement 2021-07-12T13:52:00,341 creating build/lib.linux-armv7l-3.9/pyproct/clustering/selection 2021-07-12T13:52:00,342 copying pyproct/clustering/selection/__init__.py -> build/lib.linux-armv7l-3.9/pyproct/clustering/selection 2021-07-12T13:52:00,343 copying pyproct/clustering/selection/bestClusteringSelector.py -> build/lib.linux-armv7l-3.9/pyproct/clustering/selection 2021-07-12T13:52:00,346 creating build/lib.linux-armv7l-3.9/pyproct/data 2021-07-12T13:52:00,347 copying pyproct/data/MPIDataDriver.py -> build/lib.linux-armv7l-3.9/pyproct/data 2021-07-12T13:52:00,349 copying pyproct/data/__init__.py -> build/lib.linux-armv7l-3.9/pyproct/data 2021-07-12T13:52:00,350 copying pyproct/data/dataDriver.py -> build/lib.linux-armv7l-3.9/pyproct/data 2021-07-12T13:52:00,353 creating build/lib.linux-armv7l-3.9/pyproct/data/handler 2021-07-12T13:52:00,354 copying pyproct/data/handler/data.py -> build/lib.linux-armv7l-3.9/pyproct/data/handler 2021-07-12T13:52:00,356 copying pyproct/data/handler/dataSource.py -> build/lib.linux-armv7l-3.9/pyproct/data/handler 2021-07-12T13:52:00,358 copying pyproct/data/handler/sourceGenerator.py -> build/lib.linux-armv7l-3.9/pyproct/data/handler 2021-07-12T13:52:00,360 copying pyproct/data/handler/dataHandler.py -> build/lib.linux-armv7l-3.9/pyproct/data/handler 2021-07-12T13:52:00,362 copying pyproct/data/handler/__init__.py -> build/lib.linux-armv7l-3.9/pyproct/data/handler 2021-07-12T13:52:00,363 copying pyproct/data/handler/dataLoader.py -> build/lib.linux-armv7l-3.9/pyproct/data/handler 2021-07-12T13:52:00,365 copying pyproct/data/handler/elementRange.py -> build/lib.linux-armv7l-3.9/pyproct/data/handler 2021-07-12T13:52:00,367 creating build/lib.linux-armv7l-3.9/pyproct/data/handler/featurearray 2021-07-12T13:52:00,368 copying pyproct/data/handler/featurearray/__init__.py -> build/lib.linux-armv7l-3.9/pyproct/data/handler/featurearray 2021-07-12T13:52:00,370 copying pyproct/data/handler/featurearray/featureArrayData.py -> build/lib.linux-armv7l-3.9/pyproct/data/handler/featurearray 2021-07-12T13:52:00,371 copying pyproct/data/handler/featurearray/featureArrayDataLoader.py -> build/lib.linux-armv7l-3.9/pyproct/data/handler/featurearray 2021-07-12T13:52:00,374 creating build/lib.linux-armv7l-3.9/pyproct/data/handler/protein 2021-07-12T13:52:00,375 copying pyproct/data/handler/protein/proteinEnsembleData.py -> build/lib.linux-armv7l-3.9/pyproct/data/handler/protein 2021-07-12T13:52:00,377 copying pyproct/data/handler/protein/__init__.py -> build/lib.linux-armv7l-3.9/pyproct/data/handler/protein 2021-07-12T13:52:00,378 copying pyproct/data/handler/protein/proteinEnsembleDataLoader.py -> build/lib.linux-armv7l-3.9/pyproct/data/handler/protein 2021-07-12T13:52:00,381 creating build/lib.linux-armv7l-3.9/pyproct/data/matrix 2021-07-12T13:52:00,382 copying pyproct/data/matrix/loaderMatrixCalculator.py -> build/lib.linux-armv7l-3.9/pyproct/data/matrix 2021-07-12T13:52:00,384 copying pyproct/data/matrix/matrixCalculator.py -> build/lib.linux-armv7l-3.9/pyproct/data/matrix 2021-07-12T13:52:00,386 copying pyproct/data/matrix/__init__.py -> build/lib.linux-armv7l-3.9/pyproct/data/matrix 2021-07-12T13:52:00,388 copying pyproct/data/matrix/matrixHandler.py -> build/lib.linux-armv7l-3.9/pyproct/data/matrix 2021-07-12T13:52:00,390 creating build/lib.linux-armv7l-3.9/pyproct/data/matrix/featurearray 2021-07-12T13:52:00,391 copying pyproct/data/matrix/featurearray/euclideanMatrixCalculator.py -> build/lib.linux-armv7l-3.9/pyproct/data/matrix/featurearray 2021-07-12T13:52:00,393 copying pyproct/data/matrix/featurearray/__init__.py -> build/lib.linux-armv7l-3.9/pyproct/data/matrix/featurearray 2021-07-12T13:52:00,395 creating build/lib.linux-armv7l-3.9/pyproct/data/matrix/combination 2021-07-12T13:52:00,396 copying pyproct/data/matrix/combination/__init__.py -> build/lib.linux-armv7l-3.9/pyproct/data/matrix/combination 2021-07-12T13:52:00,398 copying pyproct/data/matrix/combination/combinationMatrixCalculator.py -> build/lib.linux-armv7l-3.9/pyproct/data/matrix/combination 2021-07-12T13:52:00,401 creating build/lib.linux-armv7l-3.9/pyproct/data/matrix/protein 2021-07-12T13:52:00,401 copying pyproct/data/matrix/protein/euclideanMatrixCalculator.py -> build/lib.linux-armv7l-3.9/pyproct/data/matrix/protein 2021-07-12T13:52:00,404 copying pyproct/data/matrix/protein/__init__.py -> build/lib.linux-armv7l-3.9/pyproct/data/matrix/protein 2021-07-12T13:52:00,405 copying pyproct/data/matrix/protein/rmsdMatrixCalculator.py -> build/lib.linux-armv7l-3.9/pyproct/data/matrix/protein 2021-07-12T13:52:00,408 creating build/lib.linux-armv7l-3.9/pyproct/data/matrix/protein/cases 2021-07-12T13:52:00,409 copying pyproct/data/matrix/protein/cases/__init__.py -> build/lib.linux-armv7l-3.9/pyproct/data/matrix/protein/cases 2021-07-12T13:52:00,411 creating build/lib.linux-armv7l-3.9/pyproct/data/matrix/protein/cases/rmsd 2021-07-12T13:52:00,412 copying pyproct/data/matrix/protein/cases/rmsd/__init__.py -> build/lib.linux-armv7l-3.9/pyproct/data/matrix/protein/cases/rmsd 2021-07-12T13:52:00,413 copying pyproct/data/matrix/protein/cases/rmsd/dihedralsCase.py -> build/lib.linux-armv7l-3.9/pyproct/data/matrix/protein/cases/rmsd 2021-07-12T13:52:00,415 copying pyproct/data/matrix/protein/cases/rmsd/autoChainMappingCase.py -> build/lib.linux-armv7l-3.9/pyproct/data/matrix/protein/cases/rmsd 2021-07-12T13:52:00,417 copying pyproct/data/matrix/protein/cases/rmsd/cartesiansCase.py -> build/lib.linux-armv7l-3.9/pyproct/data/matrix/protein/cases/rmsd 2021-07-12T13:52:00,420 creating build/lib.linux-armv7l-3.9/pyproct/data/matrix/protein/cases/euclidean 2021-07-12T13:52:00,421 copying pyproct/data/matrix/protein/cases/euclidean/__init__.py -> build/lib.linux-armv7l-3.9/pyproct/data/matrix/protein/cases/euclidean 2021-07-12T13:52:00,422 copying pyproct/data/matrix/protein/cases/euclidean/dihedralsCase.py -> build/lib.linux-armv7l-3.9/pyproct/data/matrix/protein/cases/euclidean 2021-07-12T13:52:00,424 copying pyproct/data/matrix/protein/cases/euclidean/cartesiansCase.py -> build/lib.linux-armv7l-3.9/pyproct/data/matrix/protein/cases/euclidean 2021-07-12T13:52:00,427 creating build/lib.linux-armv7l-3.9/pyproct/driver 2021-07-12T13:52:00,428 copying pyproct/driver/__init__.py -> build/lib.linux-armv7l-3.9/pyproct/driver 2021-07-12T13:52:00,429 copying pyproct/driver/driver.py -> build/lib.linux-armv7l-3.9/pyproct/driver 2021-07-12T13:52:00,431 copying pyproct/driver/parameters.py -> build/lib.linux-armv7l-3.9/pyproct/driver 2021-07-12T13:52:00,433 copying pyproct/driver/mpidriver.py -> build/lib.linux-armv7l-3.9/pyproct/driver 2021-07-12T13:52:00,436 creating build/lib.linux-armv7l-3.9/pyproct/driver/observer 2021-07-12T13:52:00,436 copying pyproct/driver/observer/meanObserver.py -> build/lib.linux-armv7l-3.9/pyproct/driver/observer 2021-07-12T13:52:00,438 copying pyproct/driver/observer/accumulativeObserver.py -> build/lib.linux-armv7l-3.9/pyproct/driver/observer 2021-07-12T13:52:00,440 copying pyproct/driver/observer/__init__.py -> build/lib.linux-armv7l-3.9/pyproct/driver/observer 2021-07-12T13:52:00,441 copying pyproct/driver/observer/MPIObserver.py -> build/lib.linux-armv7l-3.9/pyproct/driver/observer 2021-07-12T13:52:00,443 copying pyproct/driver/observer/observable.py -> build/lib.linux-armv7l-3.9/pyproct/driver/observer 2021-07-12T13:52:00,445 copying pyproct/driver/observer/observer.py -> build/lib.linux-armv7l-3.9/pyproct/driver/observer 2021-07-12T13:52:00,447 creating build/lib.linux-armv7l-3.9/pyproct/driver/results 2021-07-12T13:52:00,448 copying pyproct/driver/results/clusteringResultsGatherer.py -> build/lib.linux-armv7l-3.9/pyproct/driver/results 2021-07-12T13:52:00,450 copying pyproct/driver/results/__init__.py -> build/lib.linux-armv7l-3.9/pyproct/driver/results 2021-07-12T13:52:00,452 creating build/lib.linux-armv7l-3.9/pyproct/driver/scheduling 2021-07-12T13:52:00,453 copying pyproct/driver/scheduling/__init__.py -> build/lib.linux-armv7l-3.9/pyproct/driver/scheduling 2021-07-12T13:52:00,456 copying pyproct/driver/scheduling/tools.py -> build/lib.linux-armv7l-3.9/pyproct/driver/scheduling 2021-07-12T13:52:00,459 creating build/lib.linux-armv7l-3.9/pyproct/driver/time 2021-07-12T13:52:00,460 copying pyproct/driver/time/__init__.py -> build/lib.linux-armv7l-3.9/pyproct/driver/time 2021-07-12T13:52:00,462 copying pyproct/driver/time/timerHandler.py -> build/lib.linux-armv7l-3.9/pyproct/driver/time 2021-07-12T13:52:00,466 creating build/lib.linux-armv7l-3.9/pyproct/driver/workspace 2021-07-12T13:52:00,466 copying pyproct/driver/workspace/__init__.py -> build/lib.linux-armv7l-3.9/pyproct/driver/workspace 2021-07-12T13:52:00,468 copying pyproct/driver/workspace/MPIWorkspaceHandler.py -> build/lib.linux-armv7l-3.9/pyproct/driver/workspace 2021-07-12T13:52:00,470 copying pyproct/driver/workspace/workspaceHandler.py -> build/lib.linux-armv7l-3.9/pyproct/driver/workspace 2021-07-12T13:52:00,472 creating build/lib.linux-armv7l-3.9/pyproct/postprocess 2021-07-12T13:52:00,473 copying pyproct/postprocess/__init__.py -> build/lib.linux-armv7l-3.9/pyproct/postprocess 2021-07-12T13:52:00,475 copying pyproct/postprocess/postprocessingDriver.py -> build/lib.linux-armv7l-3.9/pyproct/postprocess 2021-07-12T13:52:00,478 creating build/lib.linux-armv7l-3.9/pyproct/postprocess/actions 2021-07-12T13:52:00,478 copying pyproct/postprocess/actions/__init__.py -> build/lib.linux-armv7l-3.9/pyproct/postprocess/actions 2021-07-12T13:52:00,480 copying pyproct/postprocess/actions/clusterStats.py -> build/lib.linux-armv7l-3.9/pyproct/postprocess/actions 2021-07-12T13:52:00,482 copying pyproct/postprocess/actions/centersAndTrace.py -> build/lib.linux-armv7l-3.9/pyproct/postprocess/actions 2021-07-12T13:52:00,484 copying pyproct/postprocess/actions/proteinAtomDistances.py -> build/lib.linux-armv7l-3.9/pyproct/postprocess/actions 2021-07-12T13:52:00,487 copying pyproct/postprocess/actions/representatives.py -> build/lib.linux-armv7l-3.9/pyproct/postprocess/actions 2021-07-12T13:52:00,489 copying pyproct/postprocess/actions/kullbackLiebler.py -> build/lib.linux-armv7l-3.9/pyproct/postprocess/actions 2021-07-12T13:52:00,492 copying pyproct/postprocess/actions/proteinDihedralPlot.py -> build/lib.linux-armv7l-3.9/pyproct/postprocess/actions 2021-07-12T13:52:00,494 copying pyproct/postprocess/actions/rmsf.py -> build/lib.linux-armv7l-3.9/pyproct/postprocess/actions 2021-07-12T13:52:00,496 copying pyproct/postprocess/actions/redundanceElimination.py -> build/lib.linux-armv7l-3.9/pyproct/postprocess/actions 2021-07-12T13:52:00,498 copying pyproct/postprocess/actions/clusters.py -> build/lib.linux-armv7l-3.9/pyproct/postprocess/actions 2021-07-12T13:52:00,501 creating build/lib.linux-armv7l-3.9/pyproct/postprocess/actions/confSpaceComparison 2021-07-12T13:52:00,501 copying pyproct/postprocess/actions/confSpaceComparison/confSpaceOverlap.py -> build/lib.linux-armv7l-3.9/pyproct/postprocess/actions/confSpaceComparison 2021-07-12T13:52:00,505 copying pyproct/postprocess/actions/confSpaceComparison/comparator.py -> build/lib.linux-armv7l-3.9/pyproct/postprocess/actions/confSpaceComparison 2021-07-12T13:52:00,507 copying pyproct/postprocess/actions/confSpaceComparison/__init__.py -> build/lib.linux-armv7l-3.9/pyproct/postprocess/actions/confSpaceComparison 2021-07-12T13:52:00,509 copying pyproct/postprocess/actions/confSpaceComparison/confSpaceComparison.py -> build/lib.linux-armv7l-3.9/pyproct/postprocess/actions/confSpaceComparison 2021-07-12T13:52:00,511 copying pyproct/postprocess/actions/confSpaceComparison/tools.py -> build/lib.linux-armv7l-3.9/pyproct/postprocess/actions/confSpaceComparison 2021-07-12T13:52:00,513 copying pyproct/postprocess/actions/confSpaceComparison/overlapCalculator.py -> build/lib.linux-armv7l-3.9/pyproct/postprocess/actions/confSpaceComparison 2021-07-12T13:52:00,516 creating build/lib.linux-armv7l-3.9/pyproct/tools 2021-07-12T13:52:00,516 copying pyproct/tools/mathTools.py -> build/lib.linux-armv7l-3.9/pyproct/tools 2021-07-12T13:52:00,518 copying pyproct/tools/matrixTools.py -> build/lib.linux-armv7l-3.9/pyproct/tools 2021-07-12T13:52:00,520 copying pyproct/tools/pdbTools.py -> build/lib.linux-armv7l-3.9/pyproct/tools 2021-07-12T13:52:00,523 copying pyproct/tools/__init__.py -> build/lib.linux-armv7l-3.9/pyproct/tools 2021-07-12T13:52:00,524 copying pyproct/tools/exceptions.py -> build/lib.linux-armv7l-3.9/pyproct/tools 2021-07-12T13:52:00,526 copying pyproct/tools/commonTools.py -> build/lib.linux-armv7l-3.9/pyproct/tools 2021-07-12T13:52:00,528 copying pyproct/tools/prodyTools.py -> build/lib.linux-armv7l-3.9/pyproct/tools 2021-07-12T13:52:00,530 copying pyproct/tools/plugins.py -> build/lib.linux-armv7l-3.9/pyproct/tools 2021-07-12T13:52:00,532 copying pyproct/tools/scriptTools.py -> build/lib.linux-armv7l-3.9/pyproct/tools 2021-07-12T13:52:00,534 copying pyproct/tools/plotTools.py -> build/lib.linux-armv7l-3.9/pyproct/tools 2021-07-12T13:52:00,537 copying pyproct/tools/stateGraphTools.py -> build/lib.linux-armv7l-3.9/pyproct/tools 2021-07-12T13:52:00,539 copying pyproct/tools/distributionTools.py -> build/lib.linux-armv7l-3.9/pyproct/tools 2021-07-12T13:52:00,567 running build_ext 2021-07-12T13:52:00,573 building 'pyproct.clustering.evaluation.metrics.cython.graph.nCut' extension 2021-07-12T13:52:00,574 creating build/temp.linux-armv7l-3.9 2021-07-12T13:52:00,574 creating build/temp.linux-armv7l-3.9/pyproct 2021-07-12T13:52:00,575 creating build/temp.linux-armv7l-3.9/pyproct/clustering 2021-07-12T13:52:00,576 creating build/temp.linux-armv7l-3.9/pyproct/clustering/evaluation 2021-07-12T13:52:00,576 creating build/temp.linux-armv7l-3.9/pyproct/clustering/evaluation/metrics 2021-07-12T13:52:00,577 creating build/temp.linux-armv7l-3.9/pyproct/clustering/evaluation/metrics/cython 2021-07-12T13:52:00,577 creating build/temp.linux-armv7l-3.9/pyproct/clustering/evaluation/metrics/cython/graph 2021-07-12T13:52:00,578 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -I/usr/include/python3.9 -c pyproct/clustering/evaluation/metrics/cython/graph/nCut.c -o build/temp.linux-armv7l-3.9/pyproct/clustering/evaluation/metrics/cython/graph/nCut.o -O3 -ffast-math 2021-07-12T13:52:00,983 pyproct/clustering/evaluation/metrics/cython/graph/nCut.c: In function ‘PyInit_nCut’: 2021-07-12T13:52:00,984 pyproct/clustering/evaluation/metrics/cython/graph/nCut.c:1486:31: error: ‘PyTypeObject’ {aka ‘struct _typeobject’} has no member named ‘tp_print’ 2021-07-12T13:52:00,984 1486 | __pyx_type_5graph_4nCut_NCut.tp_print = 0; 2021-07-12T13:52:00,984 | ^ 2021-07-12T13:52:00,990 pyproct/clustering/evaluation/metrics/cython/graph/nCut.c: In function ‘__Pyx_ParseOptionalKeywords’: 2021-07-12T13:52:00,991 pyproct/clustering/evaluation/metrics/cython/graph/nCut.c:1834:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-12T13:52:00,991 1834 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-12T13:52:00,991 | ^ 2021-07-12T13:52:00,992 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-12T13:52:00,992 from /usr/include/python3.9/Python.h:97, 2021-07-12T13:52:00,992 from pyproct/clustering/evaluation/metrics/cython/graph/nCut.c:16: 2021-07-12T13:52:00,992 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-12T13:52:00,992 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-12T13:52:00,992 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-12T13:52:00,992 pyproct/clustering/evaluation/metrics/cython/graph/nCut.c:1834:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-12T13:52:00,993 1834 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-12T13:52:00,993 | ^ 2021-07-12T13:52:00,993 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-12T13:52:00,993 from /usr/include/python3.9/Python.h:97, 2021-07-12T13:52:00,993 from pyproct/clustering/evaluation/metrics/cython/graph/nCut.c:16: 2021-07-12T13:52:00,993 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-12T13:52:00,993 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-12T13:52:00,993 | ^~~~~~~~~~~~~~~~~~~ 2021-07-12T13:52:00,994 pyproct/clustering/evaluation/metrics/cython/graph/nCut.c:1834:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-12T13:52:00,994 1834 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-12T13:52:00,994 | ^ 2021-07-12T13:52:00,994 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-12T13:52:00,994 from /usr/include/python3.9/Python.h:97, 2021-07-12T13:52:00,994 from pyproct/clustering/evaluation/metrics/cython/graph/nCut.c:16: 2021-07-12T13:52:00,994 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-12T13:52:00,994 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-12T13:52:00,994 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-12T13:52:00,995 pyproct/clustering/evaluation/metrics/cython/graph/nCut.c:1834:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-12T13:52:00,995 1834 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-12T13:52:00,995 | ^ 2021-07-12T13:52:00,995 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-12T13:52:00,995 from /usr/include/python3.9/Python.h:97, 2021-07-12T13:52:00,995 from pyproct/clustering/evaluation/metrics/cython/graph/nCut.c:16: 2021-07-12T13:52:00,995 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-12T13:52:00,995 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-12T13:52:00,996 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-12T13:52:00,996 pyproct/clustering/evaluation/metrics/cython/graph/nCut.c:1834:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-12T13:52:00,996 1834 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-12T13:52:00,996 | ^ 2021-07-12T13:52:00,996 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-12T13:52:00,996 from /usr/include/python3.9/Python.h:97, 2021-07-12T13:52:00,996 from pyproct/clustering/evaluation/metrics/cython/graph/nCut.c:16: 2021-07-12T13:52:00,996 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-12T13:52:00,996 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-12T13:52:00,997 | ^~~~~~~~~~~~~~~~~~~ 2021-07-12T13:52:00,997 pyproct/clustering/evaluation/metrics/cython/graph/nCut.c:1834:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-12T13:52:00,997 1834 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-12T13:52:00,997 | ^ 2021-07-12T13:52:00,997 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-12T13:52:00,997 from /usr/include/python3.9/Python.h:97, 2021-07-12T13:52:00,997 from pyproct/clustering/evaluation/metrics/cython/graph/nCut.c:16: 2021-07-12T13:52:00,997 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-12T13:52:00,998 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-12T13:52:00,998 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-12T13:52:00,998 pyproct/clustering/evaluation/metrics/cython/graph/nCut.c:1850:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-12T13:52:00,998 1850 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-12T13:52:00,998 | ^ 2021-07-12T13:52:00,998 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-12T13:52:00,998 from /usr/include/python3.9/Python.h:97, 2021-07-12T13:52:00,998 from pyproct/clustering/evaluation/metrics/cython/graph/nCut.c:16: 2021-07-12T13:52:00,998 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-12T13:52:00,999 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-12T13:52:00,999 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-12T13:52:00,999 pyproct/clustering/evaluation/metrics/cython/graph/nCut.c:1850:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-12T13:52:00,999 1850 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-12T13:52:00,999 | ^ 2021-07-12T13:52:00,999 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-12T13:52:00,999 from /usr/include/python3.9/Python.h:97, 2021-07-12T13:52:00,999 from pyproct/clustering/evaluation/metrics/cython/graph/nCut.c:16: 2021-07-12T13:52:00,999 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-12T13:52:01,000 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-12T13:52:01,000 | ^~~~~~~~~~~~~~~~~~~ 2021-07-12T13:52:01,000 pyproct/clustering/evaluation/metrics/cython/graph/nCut.c:1850:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-12T13:52:01,000 1850 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-12T13:52:01,000 | ^ 2021-07-12T13:52:01,000 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-12T13:52:01,000 from /usr/include/python3.9/Python.h:97, 2021-07-12T13:52:01,000 from pyproct/clustering/evaluation/metrics/cython/graph/nCut.c:16: 2021-07-12T13:52:01,000 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-12T13:52:01,001 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-12T13:52:01,001 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-12T13:52:01,001 pyproct/clustering/evaluation/metrics/cython/graph/nCut.c:1850:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-12T13:52:01,001 1850 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-12T13:52:01,001 | ^ 2021-07-12T13:52:01,001 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-12T13:52:01,001 from /usr/include/python3.9/Python.h:97, 2021-07-12T13:52:01,001 from pyproct/clustering/evaluation/metrics/cython/graph/nCut.c:16: 2021-07-12T13:52:01,001 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-12T13:52:01,002 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-12T13:52:01,002 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-12T13:52:01,002 pyproct/clustering/evaluation/metrics/cython/graph/nCut.c:1850:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-12T13:52:01,002 1850 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-12T13:52:01,002 | ^ 2021-07-12T13:52:01,002 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-12T13:52:01,002 from /usr/include/python3.9/Python.h:97, 2021-07-12T13:52:01,002 from pyproct/clustering/evaluation/metrics/cython/graph/nCut.c:16: 2021-07-12T13:52:01,003 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-12T13:52:01,003 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-12T13:52:01,003 | ^~~~~~~~~~~~~~~~~~~ 2021-07-12T13:52:01,003 pyproct/clustering/evaluation/metrics/cython/graph/nCut.c:1850:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-12T13:52:01,003 1850 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-12T13:52:01,003 | ^ 2021-07-12T13:52:01,003 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-12T13:52:01,003 from /usr/include/python3.9/Python.h:97, 2021-07-12T13:52:01,004 from pyproct/clustering/evaluation/metrics/cython/graph/nCut.c:16: 2021-07-12T13:52:01,004 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-12T13:52:01,004 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-12T13:52:01,004 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-12T13:52:01,047 error: command '/usr/bin/arm-linux-gnueabihf-gcc' failed with exit code 1 2021-07-12T13:52:01,161 Building wheel for pyproct (setup.py): finished with status 'error' 2021-07-12T13:52:01,161 ERROR: Failed building wheel for pyproct 2021-07-12T13:52:01,162 Running setup.py clean for pyproct 2021-07-12T13:52:01,162 Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-jy2mfay5/pyproct_cd8a2f6ee3c6463d849f3253ec0fe5b6/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-jy2mfay5/pyproct_cd8a2f6ee3c6463d849f3253ec0fe5b6/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' clean --all 2021-07-12T13:52:02,518 running clean 2021-07-12T13:52:02,520 removing 'build/temp.linux-armv7l-3.9' (and everything under it) 2021-07-12T13:52:02,526 removing 'build/lib.linux-armv7l-3.9' (and everything under it) 2021-07-12T13:52:02,610 'build/bdist.linux-armv7l' does not exist -- can't clean it 2021-07-12T13:52:02,610 'build/scripts-3.9' does not exist -- can't clean it 2021-07-12T13:52:02,611 removing 'build' 2021-07-12T13:52:02,697 Failed to build pyproct 2021-07-12T13:52:02,698 ERROR: Failed to build one or more wheels 2021-07-12T13:52:02,698 Exception information: 2021-07-12T13:52:02,698 Traceback (most recent call last): 2021-07-12T13:52:02,698 File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/cli/base_command.py", line 180, in _main 2021-07-12T13:52:02,698 status = self.run(options, args) 2021-07-12T13:52:02,698 File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/cli/req_command.py", line 205, in wrapper 2021-07-12T13:52:02,698 return func(self, options, args) 2021-07-12T13:52:02,698 File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/commands/wheel.py", line 174, in run 2021-07-12T13:52:02,698 raise CommandError( 2021-07-12T13:52:02,698 pip._internal.exceptions.CommandError: Failed to build one or more wheels 2021-07-12T13:52:02,701 Removed build tracker: '/tmp/pip-req-tracker-skcbpllf'