2021-07-13T02:25:42,792 Created temporary directory: /tmp/pip-ephem-wheel-cache-kzo4fscn
2021-07-13T02:25:42,796 Created temporary directory: /tmp/pip-req-tracker-i6sr_ztn
2021-07-13T02:25:42,796 Initialized build tracking at /tmp/pip-req-tracker-i6sr_ztn
2021-07-13T02:25:42,797 Created build tracker: /tmp/pip-req-tracker-i6sr_ztn
2021-07-13T02:25:42,797 Entered build tracker: /tmp/pip-req-tracker-i6sr_ztn
2021-07-13T02:25:42,797 Created temporary directory: /tmp/pip-wheel-cp91_3ib
2021-07-13T02:25:42,827 1 location(s) to search for versions of topiary:
2021-07-13T02:25:42,827 * https://pypi.org/simple/topiary/
2021-07-13T02:25:42,827 Fetching project page and analyzing links: https://pypi.org/simple/topiary/
2021-07-13T02:25:42,828 Getting page https://pypi.org/simple/topiary/
2021-07-13T02:25:42,829 Found index url https://pypi.org/simple
2021-07-13T02:25:43,025   Found link https://files.pythonhosted.org/packages/38/f6/60c60d77093e492c9a139a87514fa230296ca94080fec6d479f22bf5cfcd/topiary-0.0.0.tar.gz#sha256=1a7511e45985fbccdf9c941042ea5e61d3b63d93fb61b8250812a17797892f9e (from https://pypi.org/simple/topiary/), version: 0.0.0
2021-07-13T02:25:43,026   Found link https://files.pythonhosted.org/packages/40/7f/4c423389757bae0b47f7640d8b66bf9d5f5bbf6e387faa2dfa34fa0b809e/topiary-0.0.1.tar.gz#sha256=437abd3890694161a20bd024848f30da9ad877dd0a642d36ed0a6e386b438f9b (from https://pypi.org/simple/topiary/), version: 0.0.1
2021-07-13T02:25:43,026   Found link https://files.pythonhosted.org/packages/29/a2/eb5e9dec8dafc167f24cd4234a8d75b815411ea8b6af4724e8218038d52e/topiary-0.0.2.tar.gz#sha256=42c5024809758a6a1f10ebe0530fe42dc1193afaac01015b6491c82e3ee8a6ed (from https://pypi.org/simple/topiary/), version: 0.0.2
2021-07-13T02:25:43,026   Found link https://files.pythonhosted.org/packages/42/e4/e8450b31eac4229cfbe29bc87b8594ac1b03bc06f3272996cb3d50038c15/topiary-0.0.3.tar.gz#sha256=7f4bf328aa2a91a32e24b8cdef58b0ac4aa7a0d95e34440a16e5c542ce6329d4 (from https://pypi.org/simple/topiary/), version: 0.0.3
2021-07-13T02:25:43,026   Found link https://files.pythonhosted.org/packages/bc/ea/f0de38c2ba7970d28fe8404cd7bd32b2d041e7d3dc2027d7efff390e213c/topiary-0.0.4.tar.gz#sha256=afaffe0505eb678184de3bcdbb35bfbc3de0ef68491e4bd8f03a258e6f5a321c (from https://pypi.org/simple/topiary/), version: 0.0.4
2021-07-13T02:25:43,027   Found link https://files.pythonhosted.org/packages/92/85/fd3447ea12115e2274295bbdd728707a1e3870cf5e32dd63caa5ce17e0b2/topiary-0.0.5.tar.gz#sha256=7a159c30c4930982e0f20a4f3e1537f9a3d9a474d705f1d53001f540baa7c9b8 (from https://pypi.org/simple/topiary/), version: 0.0.5
2021-07-13T02:25:43,027   Found link https://files.pythonhosted.org/packages/03/98/eaceb57e744d5324a242e9b18e2e137e6c6960dca63c5cbfdb462d60e79f/topiary-0.0.6.tar.gz#sha256=6c1d996647cf42651595455e3d550464d3871c8eefb186d58fa5f379c7b6ad75 (from https://pypi.org/simple/topiary/), version: 0.0.6
2021-07-13T02:25:43,027   Found link https://files.pythonhosted.org/packages/6b/a2/9ac4d08a189dfa90e576d8bf8769249673d2dfd9cd2a9464674c56892501/topiary-0.0.7.tar.gz#sha256=a7d999a2b0752976a4cba792b44f416f4cc16bcd956f116956c1d5c1e73fb3d1 (from https://pypi.org/simple/topiary/), version: 0.0.7
2021-07-13T02:25:43,027   Found link https://files.pythonhosted.org/packages/6a/a5/a8446cebca687d391bbb67d26873adbbfa878d9b057a613f7756568911bb/topiary-0.0.8.tar.gz#sha256=2c927ca92dc6316cb92e7b364287b1f40e018e07ab859d0cb201b16ae1118f23 (from https://pypi.org/simple/topiary/), version: 0.0.8
2021-07-13T02:25:43,028   Found link https://files.pythonhosted.org/packages/19/7f/bf4d188a19634549a26b6b995a60146510435b5687a4c9afa5af01da4215/topiary-0.0.9.tar.gz#sha256=7e2dcfc313a8308fc56ac5b0b19af87282a36d8b326b5240550a806e779f5c0e (from https://pypi.org/simple/topiary/), version: 0.0.9
2021-07-13T02:25:43,028   Found link https://files.pythonhosted.org/packages/bb/b2/e507265c740fa360bf05b47f9e957ad5f8803233dd7c892979ee6d772e9b/topiary-0.0.10.tar.gz#sha256=beb253ad7b554914eb88199162ea25cc475ea231487d4589403f3fef7f730bf8 (from https://pypi.org/simple/topiary/), version: 0.0.10
2021-07-13T02:25:43,028   Found link https://files.pythonhosted.org/packages/d8/d8/d85f730eddd20a2df9d378a4d58a96d39e700c4fa109f1ead1a8f2509170/topiary-0.0.13.tar.gz#sha256=f83270e0de97f9ed1b7e01fb38a7e9d06d15f95d8b6779250d4f84c56b0dbe0d (from https://pypi.org/simple/topiary/), version: 0.0.13
2021-07-13T02:25:43,029   Found link https://files.pythonhosted.org/packages/1a/e9/c5aad02530e1d64fc410dfc2e4eb32d4ace35d2367b6dbf9927b655e2af4/topiary-0.0.14.tar.gz#sha256=f84634877a4d9f3b564adda7cde2eb30b14d378a11d0daa25f8211759e48c162 (from https://pypi.org/simple/topiary/), version: 0.0.14
2021-07-13T02:25:43,029   Found link https://files.pythonhosted.org/packages/b1/4f/8410302ba478be063f5ba41028ad88db4dde24f4a2096643b9c55109b176/topiary-0.0.15.tar.gz#sha256=59ed568dfceb7c19046a5f73fffb4e46f2bc8fe9ee78591798a455df1391d373 (from https://pypi.org/simple/topiary/), version: 0.0.15
2021-07-13T02:25:43,029   Found link https://files.pythonhosted.org/packages/49/3a/ea68dc25b9c97e7fabecbbb5138c7be94eb3a9426f211db68f4c1ecd9ed4/topiary-0.0.16.tar.gz#sha256=b90ffb0a6b27a78f9e81e927fb7b2ab4d28a0eb28112989a00917c024d0faae9 (from https://pypi.org/simple/topiary/), version: 0.0.16
2021-07-13T02:25:43,029   Found link https://files.pythonhosted.org/packages/6b/51/a9a4af9588db8d60bd38ca7851f85308bde8023ce09b12cb61687f68e2f6/topiary-0.0.17.tar.gz#sha256=01a547506f15c8337f1d19d11401fe0df47cd2e24043524dd156c155bac4a0fe (from https://pypi.org/simple/topiary/), version: 0.0.17
2021-07-13T02:25:43,030   Found link https://files.pythonhosted.org/packages/ca/3c/01cb5d9e817ff2195d4579330d8b2d8b42e890d27109c8dd671253ea0a25/topiary-0.0.18.tar.gz#sha256=78407c675a1e193afd1cdbb153df9f9dad098bb75e47e467f3a63cbc01db67fc (from https://pypi.org/simple/topiary/), version: 0.0.18
2021-07-13T02:25:43,030   Found link https://files.pythonhosted.org/packages/0e/4a/fbc62d6da7aeb1fa64fabd8d7f0836f5a079b0a098d9b2812b3158070672/topiary-0.0.19.tar.gz#sha256=1e63f63fc70ced9fc8e4af2dc36ce7a733733e64a79792ca4ce5f6f5e1a9c6c5 (from https://pypi.org/simple/topiary/), version: 0.0.19
2021-07-13T02:25:43,030   Found link https://files.pythonhosted.org/packages/8a/f7/6b7e6863daa1cb5125420e68e85c4da83490b0700a0cd743ff0505f49df0/topiary-0.0.20.tar.gz#sha256=d84ee02968c10e8261ffa11a9739cb689cb01323f41339c8f2d7f5f48c35b5ea (from https://pypi.org/simple/topiary/), version: 0.0.20
2021-07-13T02:25:43,030   Found link https://files.pythonhosted.org/packages/0c/18/4fce39e2b363296333b7833c4624ad0fdfc799aab2771af18d5b13006be0/topiary-0.0.21.tar.gz#sha256=29e35aa5687fd94c632d75df8885295f02746e271f70d7d387e45e1c93d20010 (from https://pypi.org/simple/topiary/), version: 0.0.21
2021-07-13T02:25:43,031   Found link https://files.pythonhosted.org/packages/4f/8d/cfcda3d246e6a9dfd10fcda4de1b3cba171ffcf0508d3b8807f02765af1b/topiary-0.1.0.tar.gz#sha256=88d20b968ce60145f4a4e9aff7a951a557151a842c369bd2f6a0762f459c1cac (from https://pypi.org/simple/topiary/), version: 0.1.0
2021-07-13T02:25:43,031   Found link https://files.pythonhosted.org/packages/f4/24/61c55b78e2597bbec4941edcf4161328f725f96836e20dd3b55e4d9d5fc3/topiary-0.1.1-0.tar.gz#sha256=10470f5686838a2981cc00e7191ec98bee759c656d39eea1da2c2f125744fb15 (from https://pypi.org/simple/topiary/), version: 0.1.1-0
2021-07-13T02:25:43,031   Found link https://files.pythonhosted.org/packages/c4/6e/c3e2335ab2b5be7be8772ddd20bb158915ce5fdd0b11f8d55dea779638de/topiary-0.1.2.tar.gz#sha256=3a0fd178f2e3041ce65bc6c701d4d8dd38052128c0bfeeaf9e7f53a85ff1a473 (from https://pypi.org/simple/topiary/), version: 0.1.2
2021-07-13T02:25:43,032   Found link https://files.pythonhosted.org/packages/d3/fe/3b790a8e6401f8d7cfb50de1a4005e237f6c91ffa541c41524520c71e881/topiary-1.2.0.tar.gz#sha256=e7a84772565c293f5153f5ab1d3ffa5b97f114749bd923dfc45e14d3c037d1b9 (from https://pypi.org/simple/topiary/), version: 1.2.0
2021-07-13T02:25:43,032   Found link https://files.pythonhosted.org/packages/66/cd/6713c0c5cb9b5902943586a918f000ad4521e5d24a4ff32ee99b1d211167/topiary-1.2.1.tar.gz#sha256=377a25109171c7bc80be3d0ffa12e8a5d46cd5198ee1e468813556a85934837d (from https://pypi.org/simple/topiary/), version: 1.2.1
2021-07-13T02:25:43,032   Found link https://files.pythonhosted.org/packages/52/f0/5083f0d77ce33732322b146ed0088bee776750a07d1ef52b65a5c4f3fe21/topiary-2.0.0.tar.gz#sha256=21296eabe2f61d25c56f489ce7521845d365f9923ff38b9b033d197af0c1eba8 (from https://pypi.org/simple/topiary/), version: 2.0.0
2021-07-13T02:25:43,032   Found link https://files.pythonhosted.org/packages/e2/13/7f3c8607ff3671a0d9f1f4eb58cb7f602ce540138329dee9a3bd581c84ea/topiary-2.1.0.tar.gz#sha256=47caded7dc04b729ec57f88108b0261950ea247eca8ae65f6b77219855b94080 (from https://pypi.org/simple/topiary/), version: 2.1.0
2021-07-13T02:25:43,033   Found link https://files.pythonhosted.org/packages/3e/c7/ce747df518eafaab429e57814d08d6416c5d59fc06e8643b8a472ef0c1d2/topiary-2.2.0.tar.gz#sha256=a6d2a9bcb0031f1b8ad224fd2b9dc7969c4b6f413a5296a6c762e262d5c1d903 (from https://pypi.org/simple/topiary/), version: 2.2.0
2021-07-13T02:25:43,033   Found link https://files.pythonhosted.org/packages/8a/d1/5ff5c84ea223c671f94c9f7df80481663f3bd0755bdbdd597e83fe52ca81/topiary-3.0.0.tar.gz#sha256=12a687bf22b80997ca64a9f5bc3da1a7373873fc2fc8f0fad46009c9681771c0 (from https://pypi.org/simple/topiary/), version: 3.0.0
2021-07-13T02:25:43,033   Found link https://files.pythonhosted.org/packages/f0/e5/e560a7ec932717d57aa88285331314549bfb43565b014416db30f826ce61/topiary-3.0.2.tar.gz#sha256=e2bcaa876a5297a8e3bde89c9f3703b3d6188662fcc3da73152cd5f4190b5534 (from https://pypi.org/simple/topiary/), version: 3.0.2
2021-07-13T02:25:43,034   Found link https://files.pythonhosted.org/packages/b2/0b/b44009ee261861f74d13b506f7d69a1c44f2df1990d046f7a852a5fe6540/topiary-3.0.6.tar.gz#sha256=01e5efe5278b1cfdc13170f4d998fcdd9563b74d783d8d9d2c74c57c4e6c536a (from https://pypi.org/simple/topiary/), version: 3.0.6
2021-07-13T02:25:43,034 Skipping link: not a file: https://pypi.org/simple/topiary/
2021-07-13T02:25:43,056 Given no hashes to check 1 links for project 'topiary': discarding no candidates
2021-07-13T02:25:43,076 Collecting topiary==3.0.2
2021-07-13T02:25:43,077   Created temporary directory: /tmp/pip-unpack-1f93afmq
2021-07-13T02:25:43,258   Downloading topiary-3.0.2.tar.gz (21 kB)
2021-07-13T02:25:43,372   Added topiary==3.0.2 from https://files.pythonhosted.org/packages/f0/e5/e560a7ec932717d57aa88285331314549bfb43565b014416db30f826ce61/topiary-3.0.2.tar.gz#sha256=e2bcaa876a5297a8e3bde89c9f3703b3d6188662fcc3da73152cd5f4190b5534 to build tracker '/tmp/pip-req-tracker-i6sr_ztn'
2021-07-13T02:25:43,373     Running setup.py (path:/tmp/pip-wheel-cp91_3ib/topiary_d3df9a93b81d47b4affa24b991fa856a/setup.py) egg_info for package topiary
2021-07-13T02:25:43,374     Created temporary directory: /tmp/pip-pip-egg-info-slork4yy
2021-07-13T02:25:43,374     Running command python setup.py egg_info
2021-07-13T02:25:44,327     /tmp/pip-wheel-cp91_3ib/topiary_d3df9a93b81d47b4affa24b991fa856a/setup.py:32: DeprecationWarning: Due to possible ambiguity, 'convert()' is deprecated. Use 'convert_file()'  or 'convert_text()'.
2021-07-13T02:25:44,328       readme_restructured = pypandoc.convert(readme_markdown, to='rst', format='md')
2021-07-13T02:25:44,676     Conversion of long_description from MD to reStructuredText failed...
2021-07-13T02:25:44,676     running egg_info
2021-07-13T02:25:44,678     creating /tmp/pip-pip-egg-info-slork4yy/topiary.egg-info
2021-07-13T02:25:44,679     writing /tmp/pip-pip-egg-info-slork4yy/topiary.egg-info/PKG-INFO
2021-07-13T02:25:44,682     writing dependency_links to /tmp/pip-pip-egg-info-slork4yy/topiary.egg-info/dependency_links.txt
2021-07-13T02:25:44,683     writing entry points to /tmp/pip-pip-egg-info-slork4yy/topiary.egg-info/entry_points.txt
2021-07-13T02:25:44,685     writing requirements to /tmp/pip-pip-egg-info-slork4yy/topiary.egg-info/requires.txt
2021-07-13T02:25:44,686     writing top-level names to /tmp/pip-pip-egg-info-slork4yy/topiary.egg-info/top_level.txt
2021-07-13T02:25:44,688     writing manifest file '/tmp/pip-pip-egg-info-slork4yy/topiary.egg-info/SOURCES.txt'
2021-07-13T02:25:44,840     reading manifest file '/tmp/pip-pip-egg-info-slork4yy/topiary.egg-info/SOURCES.txt'
2021-07-13T02:25:44,844     writing manifest file '/tmp/pip-pip-egg-info-slork4yy/topiary.egg-info/SOURCES.txt'
2021-07-13T02:25:44,916   Source in /tmp/pip-wheel-cp91_3ib/topiary_d3df9a93b81d47b4affa24b991fa856a has version 3.0.2, which satisfies requirement topiary==3.0.2 from https://files.pythonhosted.org/packages/f0/e5/e560a7ec932717d57aa88285331314549bfb43565b014416db30f826ce61/topiary-3.0.2.tar.gz#sha256=e2bcaa876a5297a8e3bde89c9f3703b3d6188662fcc3da73152cd5f4190b5534
2021-07-13T02:25:44,917   Removed topiary==3.0.2 from https://files.pythonhosted.org/packages/f0/e5/e560a7ec932717d57aa88285331314549bfb43565b014416db30f826ce61/topiary-3.0.2.tar.gz#sha256=e2bcaa876a5297a8e3bde89c9f3703b3d6188662fcc3da73152cd5f4190b5534 from build tracker '/tmp/pip-req-tracker-i6sr_ztn'
2021-07-13T02:25:44,921 Created temporary directory: /tmp/pip-unpack-8yq0j992
2021-07-13T02:25:44,921 Building wheels for collected packages: topiary
2021-07-13T02:25:44,925   Created temporary directory: /tmp/pip-wheel-ij3_40lt
2021-07-13T02:25:44,926   Building wheel for topiary (setup.py): started
2021-07-13T02:25:44,926   Destination directory: /tmp/pip-wheel-ij3_40lt
2021-07-13T02:25:44,926   Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-cp91_3ib/topiary_d3df9a93b81d47b4affa24b991fa856a/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-cp91_3ib/topiary_d3df9a93b81d47b4affa24b991fa856a/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-ij3_40lt
2021-07-13T02:25:45,863   /tmp/pip-wheel-cp91_3ib/topiary_d3df9a93b81d47b4affa24b991fa856a/setup.py:32: DeprecationWarning: Due to possible ambiguity, 'convert()' is deprecated. Use 'convert_file()'  or 'convert_text()'.
2021-07-13T02:25:45,863     readme_restructured = pypandoc.convert(readme_markdown, to='rst', format='md')
2021-07-13T02:25:46,032   Conversion of long_description from MD to reStructuredText failed...
2021-07-13T02:25:46,231   running bdist_wheel
2021-07-13T02:25:46,399   running build
2021-07-13T02:25:46,399   running build_py
2021-07-13T02:25:46,541   creating build
2021-07-13T02:25:46,541   creating build/lib
2021-07-13T02:25:46,542   creating build/lib/topiary
2021-07-13T02:25:46,543   copying topiary/predictor.py -> build/lib/topiary
2021-07-13T02:25:46,546   copying topiary/sequence_helpers.py -> build/lib/topiary
2021-07-13T02:25:46,548   copying topiary/filters.py -> build/lib/topiary
2021-07-13T02:25:46,550   copying topiary/__init__.py -> build/lib/topiary
2021-07-13T02:25:46,553   creating build/lib/test
2021-07-13T02:25:46,554   copying test/test_peptide_mutation_interval.py -> build/lib/test
2021-07-13T02:25:46,556   copying test/test_rna_helpers.py -> build/lib/test
2021-07-13T02:25:46,559   copying test/test_cli_protein_changes.py -> build/lib/test
2021-07-13T02:25:46,561   copying test/test_load_cufflinks_fpkm.py -> build/lib/test
2021-07-13T02:25:46,563   copying test/test_effect_expression_filters.py -> build/lib/test
2021-07-13T02:25:46,565   copying test/test_padding.py -> build/lib/test
2021-07-13T02:25:46,567   copying test/data.py -> build/lib/test
2021-07-13T02:25:46,569   copying test/test_mutant_epitope_predictions_class1.py -> build/lib/test
2021-07-13T02:25:46,571   copying test/test_epitopes_from_commandline_args.py -> build/lib/test
2021-07-13T02:25:46,573   copying test/test_contains_mutant_residues.py -> build/lib/test
2021-07-13T02:25:46,575   copying test/test_load_stringtie_gtf_fpkm.py -> build/lib/test
2021-07-13T02:25:46,578   copying test/test_variant_expression_filters.py -> build/lib/test
2021-07-13T02:25:46,580   copying test/test_dataframe.py -> build/lib/test
2021-07-13T02:25:46,581   copying test/test_args_outputs.py -> build/lib/test
2021-07-13T02:25:46,583   copying test/test_mutant_epitope_predictions_class2.py -> build/lib/test
2021-07-13T02:25:46,586   copying test/__init__.py -> build/lib/test
2021-07-13T02:25:46,588   creating build/lib/topiary/rna
2021-07-13T02:25:46,589   copying topiary/rna/gtf.py -> build/lib/topiary/rna
2021-07-13T02:25:46,592   copying topiary/rna/cufflinks.py -> build/lib/topiary/rna
2021-07-13T02:25:46,594   copying topiary/rna/__init__.py -> build/lib/topiary/rna
2021-07-13T02:25:46,596   copying topiary/rna/common.py -> build/lib/topiary/rna
2021-07-13T02:25:46,599   creating build/lib/topiary/cli
2021-07-13T02:25:46,600   copying topiary/cli/protein_changes.py -> build/lib/topiary/cli
2021-07-13T02:25:46,603   copying topiary/cli/filtering.py -> build/lib/topiary/cli
2021-07-13T02:25:46,605   copying topiary/cli/script.py -> build/lib/topiary/cli
2021-07-13T02:25:46,607   copying topiary/cli/sequence.py -> build/lib/topiary/cli
2021-07-13T02:25:46,609   copying topiary/cli/rna.py -> build/lib/topiary/cli
2021-07-13T02:25:46,611   copying topiary/cli/outputs.py -> build/lib/topiary/cli
2021-07-13T02:25:46,614   copying topiary/cli/args.py -> build/lib/topiary/cli
2021-07-13T02:25:46,616   copying topiary/cli/errors.py -> build/lib/topiary/cli
2021-07-13T02:25:46,617   copying topiary/cli/__init__.py -> build/lib/topiary/cli
2021-07-13T02:25:46,630   installing to build/bdist.linux-armv7l/wheel
2021-07-13T02:25:46,630   running install
2021-07-13T02:25:46,631   running install_lib
2021-07-13T02:25:46,635   creating build/bdist.linux-armv7l
2021-07-13T02:25:46,635   creating build/bdist.linux-armv7l/wheel
2021-07-13T02:25:46,637   creating build/bdist.linux-armv7l/wheel/topiary
2021-07-13T02:25:46,638   copying build/lib/topiary/predictor.py -> build/bdist.linux-armv7l/wheel/topiary
2021-07-13T02:25:46,642   creating build/bdist.linux-armv7l/wheel/topiary/rna
2021-07-13T02:25:46,643   copying build/lib/topiary/rna/gtf.py -> build/bdist.linux-armv7l/wheel/topiary/rna
2021-07-13T02:25:46,645   copying build/lib/topiary/rna/cufflinks.py -> build/bdist.linux-armv7l/wheel/topiary/rna
2021-07-13T02:25:46,648   copying build/lib/topiary/rna/__init__.py -> build/bdist.linux-armv7l/wheel/topiary/rna
2021-07-13T02:25:46,650   copying build/lib/topiary/rna/common.py -> build/bdist.linux-armv7l/wheel/topiary/rna
2021-07-13T02:25:46,652   copying build/lib/topiary/sequence_helpers.py -> build/bdist.linux-armv7l/wheel/topiary
2021-07-13T02:25:46,655   copying build/lib/topiary/filters.py -> build/bdist.linux-armv7l/wheel/topiary
2021-07-13T02:25:46,658   copying build/lib/topiary/__init__.py -> build/bdist.linux-armv7l/wheel/topiary
2021-07-13T02:25:46,661   creating build/bdist.linux-armv7l/wheel/topiary/cli
2021-07-13T02:25:46,662   copying build/lib/topiary/cli/protein_changes.py -> build/bdist.linux-armv7l/wheel/topiary/cli
2021-07-13T02:25:46,665   copying build/lib/topiary/cli/filtering.py -> build/bdist.linux-armv7l/wheel/topiary/cli
2021-07-13T02:25:46,668   copying build/lib/topiary/cli/script.py -> build/bdist.linux-armv7l/wheel/topiary/cli
2021-07-13T02:25:46,670   copying build/lib/topiary/cli/sequence.py -> build/bdist.linux-armv7l/wheel/topiary/cli
2021-07-13T02:25:46,672   copying build/lib/topiary/cli/rna.py -> build/bdist.linux-armv7l/wheel/topiary/cli
2021-07-13T02:25:46,675   copying build/lib/topiary/cli/outputs.py -> build/bdist.linux-armv7l/wheel/topiary/cli
2021-07-13T02:25:46,677   copying build/lib/topiary/cli/args.py -> build/bdist.linux-armv7l/wheel/topiary/cli
2021-07-13T02:25:46,680   copying build/lib/topiary/cli/errors.py -> build/bdist.linux-armv7l/wheel/topiary/cli
2021-07-13T02:25:46,682   copying build/lib/topiary/cli/__init__.py -> build/bdist.linux-armv7l/wheel/topiary/cli
2021-07-13T02:25:46,686   creating build/bdist.linux-armv7l/wheel/test
2021-07-13T02:25:46,687   copying build/lib/test/test_peptide_mutation_interval.py -> build/bdist.linux-armv7l/wheel/test
2021-07-13T02:25:46,689   copying build/lib/test/test_rna_helpers.py -> build/bdist.linux-armv7l/wheel/test
2021-07-13T02:25:46,691   copying build/lib/test/test_cli_protein_changes.py -> build/bdist.linux-armv7l/wheel/test
2021-07-13T02:25:46,694   copying build/lib/test/test_load_cufflinks_fpkm.py -> build/bdist.linux-armv7l/wheel/test
2021-07-13T02:25:46,696   copying build/lib/test/test_effect_expression_filters.py -> build/bdist.linux-armv7l/wheel/test
2021-07-13T02:25:46,698   copying build/lib/test/test_padding.py -> build/bdist.linux-armv7l/wheel/test
2021-07-13T02:25:46,700   copying build/lib/test/data.py -> build/bdist.linux-armv7l/wheel/test
2021-07-13T02:25:46,703   copying build/lib/test/test_mutant_epitope_predictions_class1.py -> build/bdist.linux-armv7l/wheel/test
2021-07-13T02:25:46,705   copying build/lib/test/test_epitopes_from_commandline_args.py -> build/bdist.linux-armv7l/wheel/test
2021-07-13T02:25:46,707   copying build/lib/test/test_contains_mutant_residues.py -> build/bdist.linux-armv7l/wheel/test
2021-07-13T02:25:46,710   copying build/lib/test/test_load_stringtie_gtf_fpkm.py -> build/bdist.linux-armv7l/wheel/test
2021-07-13T02:25:46,712   copying build/lib/test/test_variant_expression_filters.py -> build/bdist.linux-armv7l/wheel/test
2021-07-13T02:25:46,715   copying build/lib/test/test_dataframe.py -> build/bdist.linux-armv7l/wheel/test
2021-07-13T02:25:46,717   copying build/lib/test/test_args_outputs.py -> build/bdist.linux-armv7l/wheel/test
2021-07-13T02:25:46,719   copying build/lib/test/test_mutant_epitope_predictions_class2.py -> build/bdist.linux-armv7l/wheel/test
2021-07-13T02:25:46,721   copying build/lib/test/__init__.py -> build/bdist.linux-armv7l/wheel/test
2021-07-13T02:25:46,723   running install_egg_info
2021-07-13T02:25:46,748   running egg_info
2021-07-13T02:25:46,748   writing topiary.egg-info/PKG-INFO
2021-07-13T02:25:46,751   writing dependency_links to topiary.egg-info/dependency_links.txt
2021-07-13T02:25:46,753   writing entry points to topiary.egg-info/entry_points.txt
2021-07-13T02:25:46,754   writing requirements to topiary.egg-info/requires.txt
2021-07-13T02:25:46,755   writing top-level names to topiary.egg-info/top_level.txt
2021-07-13T02:25:46,764   reading manifest file 'topiary.egg-info/SOURCES.txt'
2021-07-13T02:25:46,770   writing manifest file 'topiary.egg-info/SOURCES.txt'
2021-07-13T02:25:46,772   Copying topiary.egg-info to build/bdist.linux-armv7l/wheel/topiary-3.0.2-py3.9.egg-info
2021-07-13T02:25:46,786   running install_scripts
2021-07-13T02:25:46,843   creating build/bdist.linux-armv7l/wheel/topiary-3.0.2.dist-info/WHEEL
2021-07-13T02:25:46,846   creating '/tmp/pip-wheel-ij3_40lt/topiary-3.0.2-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2021-07-13T02:25:46,849   adding 'test/__init__.py'
2021-07-13T02:25:46,850   adding 'test/data.py'
2021-07-13T02:25:46,851   adding 'test/test_args_outputs.py'
2021-07-13T02:25:46,853   adding 'test/test_cli_protein_changes.py'
2021-07-13T02:25:46,854   adding 'test/test_contains_mutant_residues.py'
2021-07-13T02:25:46,855   adding 'test/test_dataframe.py'
2021-07-13T02:25:46,857   adding 'test/test_effect_expression_filters.py'
2021-07-13T02:25:46,858   adding 'test/test_epitopes_from_commandline_args.py'
2021-07-13T02:25:46,859   adding 'test/test_load_cufflinks_fpkm.py'
2021-07-13T02:25:46,861   adding 'test/test_load_stringtie_gtf_fpkm.py'
2021-07-13T02:25:46,863   adding 'test/test_mutant_epitope_predictions_class1.py'
2021-07-13T02:25:46,864   adding 'test/test_mutant_epitope_predictions_class2.py'
2021-07-13T02:25:46,865   adding 'test/test_padding.py'
2021-07-13T02:25:46,867   adding 'test/test_peptide_mutation_interval.py'
2021-07-13T02:25:46,868   adding 'test/test_rna_helpers.py'
2021-07-13T02:25:46,869   adding 'test/test_variant_expression_filters.py'
2021-07-13T02:25:46,871   adding 'topiary/__init__.py'
2021-07-13T02:25:46,873   adding 'topiary/filters.py'
2021-07-13T02:25:46,875   adding 'topiary/predictor.py'
2021-07-13T02:25:46,877   adding 'topiary/sequence_helpers.py'
2021-07-13T02:25:46,879   adding 'topiary/cli/__init__.py'
2021-07-13T02:25:46,880   adding 'topiary/cli/args.py'
2021-07-13T02:25:46,882   adding 'topiary/cli/errors.py'
2021-07-13T02:25:46,884   adding 'topiary/cli/filtering.py'
2021-07-13T02:25:46,885   adding 'topiary/cli/outputs.py'
2021-07-13T02:25:46,886   adding 'topiary/cli/protein_changes.py'
2021-07-13T02:25:46,888   adding 'topiary/cli/rna.py'
2021-07-13T02:25:46,889   adding 'topiary/cli/script.py'
2021-07-13T02:25:46,890   adding 'topiary/cli/sequence.py'
2021-07-13T02:25:46,892   adding 'topiary/rna/__init__.py'
2021-07-13T02:25:46,894   adding 'topiary/rna/common.py'
2021-07-13T02:25:46,895   adding 'topiary/rna/cufflinks.py'
2021-07-13T02:25:46,897   adding 'topiary/rna/gtf.py'
2021-07-13T02:25:46,899   adding 'topiary-3.0.2.dist-info/METADATA'
2021-07-13T02:25:46,900   adding 'topiary-3.0.2.dist-info/WHEEL'
2021-07-13T02:25:46,901   adding 'topiary-3.0.2.dist-info/entry_points.txt'
2021-07-13T02:25:46,902   adding 'topiary-3.0.2.dist-info/top_level.txt'
2021-07-13T02:25:46,903   adding 'topiary-3.0.2.dist-info/RECORD'
2021-07-13T02:25:46,906   removing build/bdist.linux-armv7l/wheel
2021-07-13T02:25:47,007   Building wheel for topiary (setup.py): finished with status 'done'
2021-07-13T02:25:47,010   Created wheel for topiary: filename=topiary-3.0.2-py3-none-any.whl size=35614 sha256=8a9776d2965569019b41fbae3578df6ac218b66915ac8b5e209b73b7df1e4ac0
2021-07-13T02:25:47,011   Stored in directory: /tmp/pip-ephem-wheel-cache-kzo4fscn/wheels/ec/a2/40/7c112828acefdf7f8030fad003c7c402cb591d7a3bc53dd313
2021-07-13T02:25:47,021 Successfully built topiary
2021-07-13T02:25:47,025 Removed build tracker: '/tmp/pip-req-tracker-i6sr_ztn'