2021-07-13T05:50:30,380 Created temporary directory: /tmp/pip-ephem-wheel-cache-jdmk07q5 2021-07-13T05:50:30,383 Created temporary directory: /tmp/pip-req-tracker-3689mqze 2021-07-13T05:50:30,383 Initialized build tracking at /tmp/pip-req-tracker-3689mqze 2021-07-13T05:50:30,383 Created build tracker: /tmp/pip-req-tracker-3689mqze 2021-07-13T05:50:30,383 Entered build tracker: /tmp/pip-req-tracker-3689mqze 2021-07-13T05:50:30,384 Created temporary directory: /tmp/pip-wheel-ibunq6rk 2021-07-13T05:50:30,413 1 location(s) to search for versions of immunedb: 2021-07-13T05:50:30,413 * https://pypi.org/simple/immunedb/ 2021-07-13T05:50:30,414 Fetching project page and analyzing links: https://pypi.org/simple/immunedb/ 2021-07-13T05:50:30,414 Getting page https://pypi.org/simple/immunedb/ 2021-07-13T05:50:30,416 Found index url https://pypi.org/simple 2021-07-13T05:50:30,518 Found link https://files.pythonhosted.org/packages/06/83/505d4ee553eb031c32f8f6d7b707630d9c6f7c49389388c0792fab2b8503/ImmuneDB-0.18.0.tar.gz#sha256=e8e54225deb24e4e2c7dd02bddf3b8649b99772d94259579865e32880de09e31 (from https://pypi.org/simple/immunedb/), version: 0.18.0 2021-07-13T05:50:30,519 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/8e/f2/fff249500268da241761000d2a0428d8a8a0b8fc8ee7a80acaf0666951d8/ImmuneDB-0.19.0-py2.7-linux-x86_64.egg#sha256=abe7b9f33ec4e82e3e688c20b22c5cc98eba1897427ee2e3969698207eb3e978 (from https://pypi.org/simple/immunedb/) 2021-07-13T05:50:30,519 Found link https://files.pythonhosted.org/packages/39/4c/c42a3f272f998c9ffe3196875bfb7ffbd65053b2faa29fb194c112264b16/ImmuneDB-0.19.0.tar.gz#sha256=3608138c90b4f73cc732c43adce0c811cfc90d56fca001ab50e46245afb5956f (from https://pypi.org/simple/immunedb/), version: 0.19.0 2021-07-13T05:50:30,519 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/4b/b5/2e0ffac807bd87383d881b39be7dd432c7f6e3c856a2092ee7d0fc58e455/ImmuneDB-0.19.1-py2.7-linux-x86_64.egg#sha256=6a086efd6f4fe68b372eec57e22cdff2b6169367d8e3792f86374d30e03f4b93 (from https://pypi.org/simple/immunedb/) 2021-07-13T05:50:30,520 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/8d/8b/9b351c79d7d6160c5396ac1cc8b750f8443ff139bf0ca6e4ebc6065c0407/ImmuneDB-0.19.2-py2.7-linux-x86_64.egg#sha256=343f7fa368fec72a36fa620698e0ce2882c022addab8b5ccbd0b95b3bb631f6f (from https://pypi.org/simple/immunedb/) 2021-07-13T05:50:30,520 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/c0/ae/8b8e61571a109063a9c215055bbb395db703d4224dd7c569e9f528a69daa/ImmuneDB-0.20.1-py2.7-linux-x86_64.egg#sha256=4c45b1885d74771195976e6ea02b5f85db4fe60f32325643cdf8947e87673a9e (from https://pypi.org/simple/immunedb/) 2021-07-13T05:50:30,520 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/b7/13/e239af281a67edc51692ec01ed0669ab22ef4e56e423e2a59a84d44c9b78/ImmuneDB-0.21.0-py2.7-linux-x86_64.egg#sha256=038d102d1f5a9f9090d54aa931fe8c951ce5af57c1a765e0b7378d13c4a3dbdd (from https://pypi.org/simple/immunedb/) 2021-07-13T05:50:30,520 Found link https://files.pythonhosted.org/packages/f2/66/c09e9e88cf7fc52adbd48c6510fa23f4224428bfb8aa762ce0403711833d/ImmuneDB-0.21.0.tar.gz#sha256=a38f37855d30fa241f6e216121933161b5c6e1505a64342a20b2a8feab6aa059 (from https://pypi.org/simple/immunedb/), version: 0.21.0 2021-07-13T05:50:30,520 Found link https://files.pythonhosted.org/packages/32/ca/b30afff0cefba00944b0b83ce7824c3a33c27746065994c65019802af866/ImmuneDB-0.22.1.tar.gz#sha256=d272b4e3b81a71f6cef179eded4081a4d8990a106bfb94f252f39ea3ead301c8 (from https://pypi.org/simple/immunedb/), version: 0.22.1 2021-07-13T05:50:30,521 Found link https://files.pythonhosted.org/packages/08/f5/90d77ee8489a4cd028d7bd8a9d8b4aeb40f86e527c04831987ef49d0f4b1/ImmuneDB-0.23.0.tar.gz#sha256=9635bef656da289523b0f766238ce3e60140aaaae9b1b7bfac4da23d9cdd4206 (from https://pypi.org/simple/immunedb/), version: 0.23.0 2021-07-13T05:50:30,521 Found link https://files.pythonhosted.org/packages/55/03/efd5d4505924f6d504a58046cf81a1ba345af76da44d96aad72ddf8accf5/ImmuneDB-0.24.1.tar.gz#sha256=71cf62deae101dab89e848ffedef1010fdf34bc480a2de460b492b8af68c6ff4 (from https://pypi.org/simple/immunedb/), version: 0.24.1 2021-07-13T05:50:30,521 Found link https://files.pythonhosted.org/packages/75/e1/6804b69476dbb523d2cab5633952615f016d2a220164b3c8319d29089bd6/ImmuneDB-0.25.0.tar.gz#sha256=0383ce42bace67ec179f6a1166513ac467c7b27ca21ccd3ca9ae64e32df441c0 (from https://pypi.org/simple/immunedb/), version: 0.25.0 2021-07-13T05:50:30,522 Found link https://files.pythonhosted.org/packages/24/7a/98af9739d693476c6bd5c2c87edd707675445a69ef7a8a99b883aaa465ae/ImmuneDB-0.25.1.tar.gz#sha256=51794a473d3613fccfbe729769a89370119b5fedc2f198c4992bc8c0e490e066 (from https://pypi.org/simple/immunedb/), version: 0.25.1 2021-07-13T05:50:30,522 Found link https://files.pythonhosted.org/packages/47/89/aeaec0bdef1f2c4f82895d53bb357a19c15fe0c96059c04ad81652f8831c/ImmuneDB-0.26.0.tar.gz#sha256=6eb22e7a083a26265f61f27c94cb335020358ff191f7aa9a1d836a81dc017e5c (from https://pypi.org/simple/immunedb/), version: 0.26.0 2021-07-13T05:50:30,522 Found link https://files.pythonhosted.org/packages/7d/98/bc1939b70506fca54570f2b2bf754a5ce0ab752dbb6e83a67b6a4e03cf1d/ImmuneDB-0.27.0.tar.gz#sha256=eb355791e05703f60f8eaf6d55ad31c4d64bebd94b084c7fe1c510dc749706fd (from https://pypi.org/simple/immunedb/), version: 0.27.0 2021-07-13T05:50:30,523 Found link https://files.pythonhosted.org/packages/7d/e2/87593aaa7435e43c92d42fb6c2d8d4527504f384db7b4b46d7e5c403eff7/ImmuneDB-0.28.0.tar.gz#sha256=31a128e4b88013ee3069764744733008ba2e5c6cbcb2549c7b8d9f7e53317a85 (from https://pypi.org/simple/immunedb/), version: 0.28.0 2021-07-13T05:50:30,523 Found link https://files.pythonhosted.org/packages/62/40/9e6fb1deda88eb91078efbc0ce6e44dc6c900312e667dfae5b02a23a931f/ImmuneDB-0.28.1.tar.gz#sha256=6451d806e8a641ba2ace85d6fe7bd0184fe3a1de64c68eb815f457769f90f001 (from https://pypi.org/simple/immunedb/), version: 0.28.1 2021-07-13T05:50:30,523 Found link https://files.pythonhosted.org/packages/84/24/db7f1275c7cdfca19d2e158592d0b73eb7756569af460666fd5f839eb253/ImmuneDB-0.28.2.tar.gz#sha256=b10f3cd8340dd79e6edcbe0b7c691658f3275f60ef12c09a532bea8d0d38b26d (from https://pypi.org/simple/immunedb/), version: 0.28.2 2021-07-13T05:50:30,523 Found link https://files.pythonhosted.org/packages/c2/a7/9583523da7401f8ee11baffd4d24d601c32afe8bb341746f930176de183f/ImmuneDB-0.28.3.tar.gz#sha256=b8982eaaf91348617041d17f5af58990320e022ed3514978466249362930043c (from https://pypi.org/simple/immunedb/), version: 0.28.3 2021-07-13T05:50:30,524 Found link https://files.pythonhosted.org/packages/33/40/c5ebf8bb55b3218058aee8b4bc18ebfee536db4cd11177f0738891af3e11/ImmuneDB-0.29.0.tar.gz#sha256=cd80160d9be82baa2ee5c6fb310b8ed796855ff8ea45648c83d90a5cbe5775eb (from https://pypi.org/simple/immunedb/), version: 0.29.0 2021-07-13T05:50:30,524 Found link https://files.pythonhosted.org/packages/f0/20/b240c2f3e40412808e3fef4ed63fca58e2723503b03baa56e5344dc63adb/ImmuneDB-0.29.1.tar.gz#sha256=e6dfaa07c8cdda2548ace1c5c2d7de2ad9e1d7885826ed8fe45f472966ab2470 (from https://pypi.org/simple/immunedb/), version: 0.29.1 2021-07-13T05:50:30,524 Found link https://files.pythonhosted.org/packages/7a/32/f944a55b94178bf361e0567b7d38e54e89212b2b77dbb5077a10bf6472de/ImmuneDB-0.29.2.tar.gz#sha256=04526d345ea9aa2eb1e272817788a344c370d9c69e74452f15ac0b219bdc4adf (from https://pypi.org/simple/immunedb/), version: 0.29.2 2021-07-13T05:50:30,525 Found link https://files.pythonhosted.org/packages/0a/8f/d3d1222894872125250ebeb8c8e8a394912ed2d9cea998393f77eaaade2f/ImmuneDB-0.29.3.tar.gz#sha256=968576aa6709f60c88f0edc20ef5ce6ec1e89b96a5796667632d5c6f5ce1c209 (from https://pypi.org/simple/immunedb/), version: 0.29.3 2021-07-13T05:50:30,525 Found link https://files.pythonhosted.org/packages/9c/17/8456fc1fb3ffe152841acfaf1aec374ec699755483e0ffc2d0165714f886/ImmuneDB-0.29.4.tar.gz#sha256=607d7d121805cd61cb518f8f816e62818fa4600a8392476ae104aea34ccb1b2f (from https://pypi.org/simple/immunedb/), version: 0.29.4 2021-07-13T05:50:30,525 Found link https://files.pythonhosted.org/packages/11/77/e027a780b33a727e5e486b3c3b814daff9a0f79b2edd060b2272f69a58fd/ImmuneDB-0.29.5.tar.gz#sha256=5aa51c6713eadb8ac2664fa0fc0443fc801f6ae379416f5794e16ca231f53e0c (from https://pypi.org/simple/immunedb/), version: 0.29.5 2021-07-13T05:50:30,525 Found link https://files.pythonhosted.org/packages/ad/6d/a78d4e7172cd11d16a8eebc1c2b390b01806f0216b434a89186edb2817c6/ImmuneDB-0.29.6.tar.gz#sha256=013a3f308e7b7863681540581ed2dddbcfe7db8ebaab93b36012245720df3dd9 (from https://pypi.org/simple/immunedb/), version: 0.29.6 2021-07-13T05:50:30,526 Found link https://files.pythonhosted.org/packages/6f/52/ef1821aac33a31fc1c576e9a1a4615634f43521d709aeb6331e214dae212/ImmuneDB-0.29.7.tar.gz#sha256=388b6b121cd94955986c834a88a93c97a6df79be83760ea66d0c79d6a3202f47 (from https://pypi.org/simple/immunedb/), version: 0.29.7 2021-07-13T05:50:30,526 Found link https://files.pythonhosted.org/packages/11/fc/2585cbb3569e1fe582df14d5c72d57e768878d5a816e774490aa2ec36986/ImmuneDB-0.29.8.tar.gz#sha256=4797557b900133b334f042c47794b24f60aad310e815591f3b8396c8376201d0 (from https://pypi.org/simple/immunedb/), version: 0.29.8 2021-07-13T05:50:30,526 Found link https://files.pythonhosted.org/packages/83/ac/d6eb6a66441d7e3f3b9c73efdd894d758594220d0a6cfbda95dc3208a3ed/ImmuneDB-0.29.9.tar.gz#sha256=70ed149edd338acc0a7d55ee53acaf9d7d9014c69fe0a9192ac953864bfc1124 (from https://pypi.org/simple/immunedb/), version: 0.29.9 2021-07-13T05:50:30,527 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/99/2d/8228b228862c389465b0b9b66bda179f54621e6367cbfa165143aaf6adf0/ImmuneDB-0.29.10-py3.6-linux-x86_64.egg#sha256=5ca390ef46dafd7de6d4ac26fe4e278a673257cf8bb02dfa05ebeda7b4cc344b (from https://pypi.org/simple/immunedb/) 2021-07-13T05:50:30,527 Found link https://files.pythonhosted.org/packages/64/a2/e4e302d9fa54bbccc272689c7d35779b14bf7a83136fca4116f31e3cb695/ImmuneDB-0.29.10.tar.gz#sha256=2ac2260a1452b515d15b2eb9a2391164c839fd9efa646d0e00bd83156fa05647 (from https://pypi.org/simple/immunedb/), version: 0.29.10 2021-07-13T05:50:30,527 Found link https://files.pythonhosted.org/packages/ba/10/d5732f71fc69de4a6e0464e827a205c2b130e01a7fe4426515c15a0cb49b/ImmuneDB-0.29.11.tar.gz#sha256=b3a75fecb36c0161611342ea1a43dcf78cc0df6a207ab2b44f3a05896ebbbd88 (from https://pypi.org/simple/immunedb/), version: 0.29.11 2021-07-13T05:50:30,527 Skipping link: not a file: https://pypi.org/simple/immunedb/ 2021-07-13T05:50:30,548 Given no hashes to check 1 links for project 'immunedb': discarding no candidates 2021-07-13T05:50:30,567 Collecting immunedb==0.23.0 2021-07-13T05:50:30,569 Created temporary directory: /tmp/pip-unpack-tlwe_lfu 2021-07-13T05:50:30,609 Downloading ImmuneDB-0.23.0.tar.gz (68 kB) 2021-07-13T05:50:30,776 Added immunedb==0.23.0 from https://files.pythonhosted.org/packages/08/f5/90d77ee8489a4cd028d7bd8a9d8b4aeb40f86e527c04831987ef49d0f4b1/ImmuneDB-0.23.0.tar.gz#sha256=9635bef656da289523b0f766238ce3e60140aaaae9b1b7bfac4da23d9cdd4206 to build tracker '/tmp/pip-req-tracker-3689mqze' 2021-07-13T05:50:30,777 Running setup.py (path:/tmp/pip-wheel-ibunq6rk/immunedb_ea282d79a5b34372b55138ef8a88a578/setup.py) egg_info for package immunedb 2021-07-13T05:50:30,778 Created temporary directory: /tmp/pip-pip-egg-info-9ac1dliq 2021-07-13T05:50:30,779 Running command python setup.py egg_info 2021-07-13T05:50:31,630 running egg_info 2021-07-13T05:50:31,633 creating /tmp/pip-pip-egg-info-9ac1dliq/ImmuneDB.egg-info 2021-07-13T05:50:31,634 writing /tmp/pip-pip-egg-info-9ac1dliq/ImmuneDB.egg-info/PKG-INFO 2021-07-13T05:50:31,635 writing dependency_links to /tmp/pip-pip-egg-info-9ac1dliq/ImmuneDB.egg-info/dependency_links.txt 2021-07-13T05:50:31,637 writing requirements to /tmp/pip-pip-egg-info-9ac1dliq/ImmuneDB.egg-info/requires.txt 2021-07-13T05:50:31,638 writing top-level names to /tmp/pip-pip-egg-info-9ac1dliq/ImmuneDB.egg-info/top_level.txt 2021-07-13T05:50:31,640 writing manifest file '/tmp/pip-pip-egg-info-9ac1dliq/ImmuneDB.egg-info/SOURCES.txt' 2021-07-13T05:50:31,983 reading manifest file '/tmp/pip-pip-egg-info-9ac1dliq/ImmuneDB.egg-info/SOURCES.txt' 2021-07-13T05:50:31,988 writing manifest file '/tmp/pip-pip-egg-info-9ac1dliq/ImmuneDB.egg-info/SOURCES.txt' 2021-07-13T05:50:32,062 Source in /tmp/pip-wheel-ibunq6rk/immunedb_ea282d79a5b34372b55138ef8a88a578 has version 0.23.0, which satisfies requirement immunedb==0.23.0 from https://files.pythonhosted.org/packages/08/f5/90d77ee8489a4cd028d7bd8a9d8b4aeb40f86e527c04831987ef49d0f4b1/ImmuneDB-0.23.0.tar.gz#sha256=9635bef656da289523b0f766238ce3e60140aaaae9b1b7bfac4da23d9cdd4206 2021-07-13T05:50:32,063 Removed immunedb==0.23.0 from https://files.pythonhosted.org/packages/08/f5/90d77ee8489a4cd028d7bd8a9d8b4aeb40f86e527c04831987ef49d0f4b1/ImmuneDB-0.23.0.tar.gz#sha256=9635bef656da289523b0f766238ce3e60140aaaae9b1b7bfac4da23d9cdd4206 from build tracker '/tmp/pip-req-tracker-3689mqze' 2021-07-13T05:50:32,067 Created temporary directory: /tmp/pip-unpack-rtyw7ulw 2021-07-13T05:50:32,068 Building wheels for collected packages: immunedb 2021-07-13T05:50:32,072 Created temporary directory: /tmp/pip-wheel-payi2glv 2021-07-13T05:50:32,072 Building wheel for immunedb (setup.py): started 2021-07-13T05:50:32,073 Destination directory: /tmp/pip-wheel-payi2glv 2021-07-13T05:50:32,073 Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-ibunq6rk/immunedb_ea282d79a5b34372b55138ef8a88a578/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-ibunq6rk/immunedb_ea282d79a5b34372b55138ef8a88a578/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-payi2glv 2021-07-13T05:50:32,961 running bdist_wheel 2021-07-13T05:50:33,117 running build 2021-07-13T05:50:33,117 running build_py 2021-07-13T05:50:33,257 creating build 2021-07-13T05:50:33,257 creating build/lib.linux-armv7l-3.9 2021-07-13T05:50:33,258 creating build/lib.linux-armv7l-3.9/immunedb 2021-07-13T05:50:33,259 copying immunedb/__init__.py -> build/lib.linux-armv7l-3.9/immunedb 2021-07-13T05:50:33,261 creating build/lib.linux-armv7l-3.9/immunedb/aggregation 2021-07-13T05:50:33,262 copying immunedb/aggregation/collapse.py -> build/lib.linux-armv7l-3.9/immunedb/aggregation 2021-07-13T05:50:33,264 copying immunedb/aggregation/clone_stats.py -> build/lib.linux-armv7l-3.9/immunedb/aggregation 2021-07-13T05:50:33,267 copying immunedb/aggregation/sample_stats.py -> build/lib.linux-armv7l-3.9/immunedb/aggregation 2021-07-13T05:50:33,269 copying immunedb/aggregation/clones.py -> build/lib.linux-armv7l-3.9/immunedb/aggregation 2021-07-13T05:50:33,272 copying immunedb/aggregation/__init__.py -> build/lib.linux-armv7l-3.9/immunedb/aggregation 2021-07-13T05:50:33,274 creating build/lib.linux-armv7l-3.9/immunedb/api 2021-07-13T05:50:33,275 copying immunedb/api/queries.py -> build/lib.linux-armv7l-3.9/immunedb/api 2021-07-13T05:50:33,278 copying immunedb/api/__init__.py -> build/lib.linux-armv7l-3.9/immunedb/api 2021-07-13T05:50:33,279 copying immunedb/api/rest_service.py -> build/lib.linux-armv7l-3.9/immunedb/api 2021-07-13T05:50:33,283 creating build/lib.linux-armv7l-3.9/immunedb/common 2021-07-13T05:50:33,284 copying immunedb/common/config.py -> build/lib.linux-armv7l-3.9/immunedb/common 2021-07-13T05:50:33,286 copying immunedb/common/models.py -> build/lib.linux-armv7l-3.9/immunedb/common 2021-07-13T05:50:33,289 copying immunedb/common/baseline.py -> build/lib.linux-armv7l-3.9/immunedb/common 2021-07-13T05:50:33,292 copying immunedb/common/__init__.py -> build/lib.linux-armv7l-3.9/immunedb/common 2021-07-13T05:50:33,294 copying immunedb/common/mutations.py -> build/lib.linux-armv7l-3.9/immunedb/common 2021-07-13T05:50:33,296 copying immunedb/common/modification_log.py -> build/lib.linux-armv7l-3.9/immunedb/common 2021-07-13T05:50:33,300 creating build/lib.linux-armv7l-3.9/immunedb/exporting 2021-07-13T05:50:33,301 copying immunedb/exporting/clone_export.py -> build/lib.linux-armv7l-3.9/immunedb/exporting 2021-07-13T05:50:33,303 copying immunedb/exporting/cli.py -> build/lib.linux-armv7l-3.9/immunedb/exporting 2021-07-13T05:50:33,305 copying immunedb/exporting/writers.py -> build/lib.linux-armv7l-3.9/immunedb/exporting 2021-07-13T05:50:33,308 copying immunedb/exporting/sequence_export.py -> build/lib.linux-armv7l-3.9/immunedb/exporting 2021-07-13T05:50:33,310 copying immunedb/exporting/__init__.py -> build/lib.linux-armv7l-3.9/immunedb/exporting 2021-07-13T05:50:33,312 copying immunedb/exporting/mutation_export.py -> build/lib.linux-armv7l-3.9/immunedb/exporting 2021-07-13T05:50:33,314 copying immunedb/exporting/export.py -> build/lib.linux-armv7l-3.9/immunedb/exporting 2021-07-13T05:50:33,317 creating build/lib.linux-armv7l-3.9/immunedb/identification 2021-07-13T05:50:33,319 copying immunedb/identification/anchor.py -> build/lib.linux-armv7l-3.9/immunedb/identification 2021-07-13T05:50:33,322 copying immunedb/identification/genes.py -> build/lib.linux-armv7l-3.9/immunedb/identification 2021-07-13T05:50:33,324 copying immunedb/identification/vdj_sequence.py -> build/lib.linux-armv7l-3.9/immunedb/identification 2021-07-13T05:50:33,327 copying immunedb/identification/local_align.py -> build/lib.linux-armv7l-3.9/immunedb/identification 2021-07-13T05:50:33,330 copying immunedb/identification/metadata.py -> build/lib.linux-armv7l-3.9/immunedb/identification 2021-07-13T05:50:33,332 copying immunedb/identification/identify.py -> build/lib.linux-armv7l-3.9/immunedb/identification 2021-07-13T05:50:33,334 copying immunedb/identification/__init__.py -> build/lib.linux-armv7l-3.9/immunedb/identification 2021-07-13T05:50:33,337 creating build/lib.linux-armv7l-3.9/immunedb/importing 2021-07-13T05:50:33,338 copying immunedb/importing/delimited.py -> build/lib.linux-armv7l-3.9/immunedb/importing 2021-07-13T05:50:33,341 copying immunedb/importing/clones.py -> build/lib.linux-armv7l-3.9/immunedb/importing 2021-07-13T05:50:33,343 copying immunedb/importing/__init__.py -> build/lib.linux-armv7l-3.9/immunedb/importing 2021-07-13T05:50:33,345 creating build/lib.linux-armv7l-3.9/immunedb/trees 2021-07-13T05:50:33,346 copying immunedb/trees/__init__.py -> build/lib.linux-armv7l-3.9/immunedb/trees 2021-07-13T05:50:33,349 copying immunedb/trees/clearcut.py -> build/lib.linux-armv7l-3.9/immunedb/trees 2021-07-13T05:50:33,352 creating build/lib.linux-armv7l-3.9/immunedb/util 2021-07-13T05:50:33,353 copying immunedb/util/admin.py -> build/lib.linux-armv7l-3.9/immunedb/util 2021-07-13T05:50:33,355 copying immunedb/util/log.py -> build/lib.linux-armv7l-3.9/immunedb/util 2021-07-13T05:50:33,357 copying immunedb/util/nested_writer.py -> build/lib.linux-armv7l-3.9/immunedb/util 2021-07-13T05:50:33,359 copying immunedb/util/funcs.py -> build/lib.linux-armv7l-3.9/immunedb/util 2021-07-13T05:50:33,361 copying immunedb/util/hyper.py -> build/lib.linux-armv7l-3.9/immunedb/util 2021-07-13T05:50:33,363 copying immunedb/util/__init__.py -> build/lib.linux-armv7l-3.9/immunedb/util 2021-07-13T05:50:33,365 copying immunedb/util/concurrent.py -> build/lib.linux-armv7l-3.9/immunedb/util 2021-07-13T05:50:33,367 copying immunedb/util/lookups.py -> build/lib.linux-armv7l-3.9/immunedb/util 2021-07-13T05:50:33,376 running build_ext 2021-07-13T05:50:33,382 building 'dnautils' extension 2021-07-13T05:50:33,383 creating build/temp.linux-armv7l-3.9 2021-07-13T05:50:33,383 creating build/temp.linux-armv7l-3.9/lib 2021-07-13T05:50:33,384 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.9 -c lib/dnautils.c -o build/temp.linux-armv7l-3.9/lib/dnautils.o -std=c99 2021-07-13T05:50:33,697 lib/dnautils.c: In function ‘dnautils_equal’: 2021-07-13T05:50:33,698 lib/dnautils.c:22:9: warning: implicit declaration of function ‘PyString_Size’; did you mean ‘PyMapping_Size’? [-Wimplicit-function-declaration] 2021-07-13T05:50:33,698 22 | if (PyString_Size(s1) != PyString_Size(s2)) { 2021-07-13T05:50:33,698 | ^~~~~~~~~~~~~ 2021-07-13T05:50:33,698 | PyMapping_Size 2021-07-13T05:50:33,705 lib/dnautils.c:27:17: warning: implicit declaration of function ‘PyString_AsString’ [-Wimplicit-function-declaration] 2021-07-13T05:50:33,706 27 | if ((str1 = PyString_AsString(s1)) == NULL) { 2021-07-13T05:50:33,706 | ^~~~~~~~~~~~~~~~~ 2021-07-13T05:50:33,706 lib/dnautils.c:27:15: warning: assignment to ‘char *’ from ‘int’ makes pointer from integer without a cast [-Wint-conversion] 2021-07-13T05:50:33,706 27 | if ((str1 = PyString_AsString(s1)) == NULL) { 2021-07-13T05:50:33,706 | ^ 2021-07-13T05:50:33,706 lib/dnautils.c:30:15: warning: assignment to ‘char *’ from ‘int’ makes pointer from integer without a cast [-Wint-conversion] 2021-07-13T05:50:33,707 30 | if ((str2 = PyString_AsString(s2)) == NULL) { 2021-07-13T05:50:33,707 | ^ 2021-07-13T05:50:33,707 lib/dnautils.c:34:19: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 2021-07-13T05:50:33,707 34 | for (i = 0; i < PyString_Size(s1); i++) { 2021-07-13T05:50:33,707 | ^ 2021-07-13T05:50:33,707 lib/dnautils.c: In function ‘dnautils_hamming’: 2021-07-13T05:50:33,707 lib/dnautils.c:59:15: warning: assignment to ‘char *’ from ‘int’ makes pointer from integer without a cast [-Wint-conversion] 2021-07-13T05:50:33,708 59 | if ((str1 = PyString_AsString(s1)) == NULL) { 2021-07-13T05:50:33,708 | ^ 2021-07-13T05:50:33,708 lib/dnautils.c:62:15: warning: assignment to ‘char *’ from ‘int’ makes pointer from integer without a cast [-Wint-conversion] 2021-07-13T05:50:33,708 62 | if ((str2 = PyString_AsString(s2)) == NULL) { 2021-07-13T05:50:33,708 | ^ 2021-07-13T05:50:33,708 lib/dnautils.c:66:19: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 2021-07-13T05:50:33,709 66 | for (i = 0; i < PyString_Size(s1); i++) { 2021-07-13T05:50:33,709 | ^ 2021-07-13T05:50:33,709 lib/dnautils.c: At top level: 2021-07-13T05:50:33,709 lib/dnautils.c:76:1: warning: return type defaults to ‘int’ [-Wimplicit-int] 2021-07-13T05:50:33,709 76 | dnautils_streak_pos(PyObject *self, PyObject *args) 2021-07-13T05:50:33,709 | ^~~~~~~~~~~~~~~~~~~ 2021-07-13T05:50:33,709 lib/dnautils.c: In function ‘dnautils_streak_pos’: 2021-07-13T05:50:33,709 lib/dnautils.c:85:16: warning: returning ‘void *’ from a function with return type ‘int’ makes integer from pointer without a cast [-Wint-conversion] 2021-07-13T05:50:33,710 85 | return NULL; 2021-07-13T05:50:33,710 | ^~~~ 2021-07-13T05:50:33,710 lib/dnautils.c:90:16: warning: returning ‘void *’ from a function with return type ‘int’ makes integer from pointer without a cast [-Wint-conversion] 2021-07-13T05:50:33,710 90 | return NULL; 2021-07-13T05:50:33,710 | ^~~~ 2021-07-13T05:50:33,711 lib/dnautils.c:93:15: warning: assignment to ‘char *’ from ‘int’ makes pointer from integer without a cast [-Wint-conversion] 2021-07-13T05:50:33,711 93 | if ((str1 = PyString_AsString(s1)) == NULL) { 2021-07-13T05:50:33,711 | ^ 2021-07-13T05:50:33,711 lib/dnautils.c:94:16: warning: returning ‘void *’ from a function with return type ‘int’ makes integer from pointer without a cast [-Wint-conversion] 2021-07-13T05:50:33,711 94 | return NULL; 2021-07-13T05:50:33,711 | ^~~~ 2021-07-13T05:50:33,711 lib/dnautils.c:96:15: warning: assignment to ‘char *’ from ‘int’ makes pointer from integer without a cast [-Wint-conversion] 2021-07-13T05:50:33,712 96 | if ((str2 = PyString_AsString(s2)) == NULL) { 2021-07-13T05:50:33,712 | ^ 2021-07-13T05:50:33,712 lib/dnautils.c:97:16: warning: returning ‘void *’ from a function with return type ‘int’ makes integer from pointer without a cast [-Wint-conversion] 2021-07-13T05:50:33,712 97 | return NULL; 2021-07-13T05:50:33,712 | ^~~~ 2021-07-13T05:50:33,712 lib/dnautils.c:100:19: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 2021-07-13T05:50:33,712 100 | for (i = 0; i < PyString_Size(s1); i++) { 2021-07-13T05:50:33,712 | ^ 2021-07-13T05:50:33,713 lib/dnautils.c:104:24: warning: returning ‘PyObject *’ {aka ‘struct _object *’} from a function with return type ‘int’ makes integer from pointer without a cast [-Wint-conversion] 2021-07-13T05:50:33,713 104 | return Py_BuildValue("I", i); 2021-07-13T05:50:33,713 | ^~~~~~~~~~~~~~~~~~~~~ 2021-07-13T05:50:33,713 lib/dnautils.c:110:12: warning: returning ‘PyObject *’ {aka ‘struct _object *’} from a function with return type ‘int’ makes integer from pointer without a cast [-Wint-conversion] 2021-07-13T05:50:33,713 110 | return Py_BuildValue("O", Py_None); 2021-07-13T05:50:33,713 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-13T05:50:33,713 lib/dnautils.c: At top level: 2021-07-13T05:50:33,713 lib/dnautils.c:118:30: warning: initialization of ‘PyObject * (*)(PyObject *, PyObject *)’ {aka ‘struct _object * (*)(struct _object *, struct _object *)’} from incompatible pointer type ‘int (*)(PyObject *, PyObject *)’ {aka ‘int (*)(struct _object *, struct _object *)’} [-Wincompatible-pointer-types] 2021-07-13T05:50:33,713 118 | {"find_streak_position", dnautils_streak_pos, METH_VARARGS, 2021-07-13T05:50:33,714 | ^~~~~~~~~~~~~~~~~~~ 2021-07-13T05:50:33,714 lib/dnautils.c:118:30: note: (near initialization for ‘DNAUtilsMethods[2].ml_meth’) 2021-07-13T05:50:33,714 lib/dnautils.c: In function ‘initdnautils’: 2021-07-13T05:50:33,714 lib/dnautils.c:127:14: warning: implicit declaration of function ‘Py_InitModule’ [-Wimplicit-function-declaration] 2021-07-13T05:50:33,714 127 | module = Py_InitModule("dnautils", DNAUtilsMethods); 2021-07-13T05:50:33,715 | ^~~~~~~~~~~~~ 2021-07-13T05:50:33,715 lib/dnautils.c:127:12: warning: assignment to ‘PyObject *’ {aka ‘struct _object *’} from ‘int’ makes pointer from integer without a cast [-Wint-conversion] 2021-07-13T05:50:33,716 127 | module = Py_InitModule("dnautils", DNAUtilsMethods); 2021-07-13T05:50:33,716 | ^ 2021-07-13T05:50:33,718 lib/dnautils.c:131:1: warning: control reaches end of non-void function [-Wreturn-type] 2021-07-13T05:50:33,719 131 | } 2021-07-13T05:50:33,719 | ^ 2021-07-13T05:50:33,867 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/lib/dnautils.o -o build/lib.linux-armv7l-3.9/dnautils.cpython-39-arm-linux-gnueabihf.so 2021-07-13T05:50:33,986 running build_scripts 2021-07-13T05:50:33,987 creating build/scripts-3.9 2021-07-13T05:50:33,989 copying and adjusting bin/immunedb_admin -> build/scripts-3.9 2021-07-13T05:50:33,991 copying and adjusting bin/immunedb_clones -> build/scripts-3.9 2021-07-13T05:50:33,994 copying and adjusting bin/immunedb_clone_import -> build/scripts-3.9 2021-07-13T05:50:33,996 copying and adjusting bin/immunedb_clone_stats -> build/scripts-3.9 2021-07-13T05:50:33,997 copying and adjusting bin/immunedb_clone_pressure -> build/scripts-3.9 2021-07-13T05:50:33,999 copying and adjusting bin/immunedb_clone_trees -> build/scripts-3.9 2021-07-13T05:50:34,000 copying and adjusting bin/immunedb_collapse -> build/scripts-3.9 2021-07-13T05:50:34,002 copying and adjusting bin/immunedb_export -> build/scripts-3.9 2021-07-13T05:50:34,004 copying and adjusting bin/immunedb_local_align -> build/scripts-3.9 2021-07-13T05:50:34,006 copying and adjusting bin/immunedb_identify -> build/scripts-3.9 2021-07-13T05:50:34,008 copying and adjusting bin/immunedb_import -> build/scripts-3.9 2021-07-13T05:50:34,010 copying and adjusting bin/immunedb_metadata -> build/scripts-3.9 2021-07-13T05:50:34,011 copying and adjusting bin/immunedb_rest -> build/scripts-3.9 2021-07-13T05:50:34,013 copying and adjusting bin/immunedb_sample_stats -> build/scripts-3.9 2021-07-13T05:50:34,015 copying and adjusting bin/immunedb_sql -> build/scripts-3.9 2021-07-13T05:50:34,017 copying and adjusting bin/immunedb_genotype -> build/scripts-3.9 2021-07-13T05:50:34,019 copying bin/run_tigger -> build/scripts-3.9 2021-07-13T05:50:34,021 changing mode of build/scripts-3.9/immunedb_admin from 644 to 755 2021-07-13T05:50:34,022 changing mode of build/scripts-3.9/immunedb_clones from 644 to 755 2021-07-13T05:50:34,022 changing mode of build/scripts-3.9/immunedb_clone_import from 644 to 755 2021-07-13T05:50:34,022 changing mode of build/scripts-3.9/immunedb_clone_stats from 644 to 755 2021-07-13T05:50:34,023 changing mode of build/scripts-3.9/immunedb_clone_pressure from 644 to 755 2021-07-13T05:50:34,023 changing mode of build/scripts-3.9/immunedb_clone_trees from 644 to 755 2021-07-13T05:50:34,023 changing mode of build/scripts-3.9/immunedb_collapse from 644 to 755 2021-07-13T05:50:34,024 changing mode of build/scripts-3.9/immunedb_export from 644 to 755 2021-07-13T05:50:34,024 changing mode of build/scripts-3.9/immunedb_local_align from 644 to 755 2021-07-13T05:50:34,025 changing mode of build/scripts-3.9/immunedb_identify from 644 to 755 2021-07-13T05:50:34,025 changing mode of build/scripts-3.9/immunedb_import from 644 to 755 2021-07-13T05:50:34,026 changing mode of build/scripts-3.9/immunedb_metadata from 644 to 755 2021-07-13T05:50:34,026 changing mode of build/scripts-3.9/immunedb_rest from 644 to 755 2021-07-13T05:50:34,026 changing mode of build/scripts-3.9/immunedb_sample_stats from 644 to 755 2021-07-13T05:50:34,027 changing mode of build/scripts-3.9/immunedb_sql from 644 to 755 2021-07-13T05:50:34,027 changing mode of build/scripts-3.9/immunedb_genotype from 644 to 755 2021-07-13T05:50:34,037 installing to build/bdist.linux-armv7l/wheel 2021-07-13T05:50:34,037 running install 2021-07-13T05:50:34,039 running install_lib 2021-07-13T05:50:34,043 creating build/bdist.linux-armv7l 2021-07-13T05:50:34,043 creating build/bdist.linux-armv7l/wheel 2021-07-13T05:50:34,046 creating build/bdist.linux-armv7l/wheel/immunedb 2021-07-13T05:50:34,048 creating build/bdist.linux-armv7l/wheel/immunedb/common 2021-07-13T05:50:34,050 copying build/lib.linux-armv7l-3.9/immunedb/common/config.py -> build/bdist.linux-armv7l/wheel/immunedb/common 2021-07-13T05:50:34,052 copying build/lib.linux-armv7l-3.9/immunedb/common/models.py -> build/bdist.linux-armv7l/wheel/immunedb/common 2021-07-13T05:50:34,056 copying build/lib.linux-armv7l-3.9/immunedb/common/baseline.py -> build/bdist.linux-armv7l/wheel/immunedb/common 2021-07-13T05:50:34,058 copying build/lib.linux-armv7l-3.9/immunedb/common/__init__.py -> build/bdist.linux-armv7l/wheel/immunedb/common 2021-07-13T05:50:34,060 copying build/lib.linux-armv7l-3.9/immunedb/common/mutations.py -> build/bdist.linux-armv7l/wheel/immunedb/common 2021-07-13T05:50:34,062 copying build/lib.linux-armv7l-3.9/immunedb/common/modification_log.py -> build/bdist.linux-armv7l/wheel/immunedb/common 2021-07-13T05:50:34,065 creating build/bdist.linux-armv7l/wheel/immunedb/importing 2021-07-13T05:50:34,066 copying build/lib.linux-armv7l-3.9/immunedb/importing/delimited.py -> build/bdist.linux-armv7l/wheel/immunedb/importing 2021-07-13T05:50:34,069 copying build/lib.linux-armv7l-3.9/immunedb/importing/clones.py -> build/bdist.linux-armv7l/wheel/immunedb/importing 2021-07-13T05:50:34,071 copying build/lib.linux-armv7l-3.9/immunedb/importing/__init__.py -> build/bdist.linux-armv7l/wheel/immunedb/importing 2021-07-13T05:50:34,074 creating build/bdist.linux-armv7l/wheel/immunedb/aggregation 2021-07-13T05:50:34,075 copying build/lib.linux-armv7l-3.9/immunedb/aggregation/collapse.py -> build/bdist.linux-armv7l/wheel/immunedb/aggregation 2021-07-13T05:50:34,079 copying build/lib.linux-armv7l-3.9/immunedb/aggregation/clone_stats.py -> build/bdist.linux-armv7l/wheel/immunedb/aggregation 2021-07-13T05:50:34,082 copying build/lib.linux-armv7l-3.9/immunedb/aggregation/sample_stats.py -> build/bdist.linux-armv7l/wheel/immunedb/aggregation 2021-07-13T05:50:34,085 copying build/lib.linux-armv7l-3.9/immunedb/aggregation/clones.py -> build/bdist.linux-armv7l/wheel/immunedb/aggregation 2021-07-13T05:50:34,088 copying build/lib.linux-armv7l-3.9/immunedb/aggregation/__init__.py -> build/bdist.linux-armv7l/wheel/immunedb/aggregation 2021-07-13T05:50:34,091 creating build/bdist.linux-armv7l/wheel/immunedb/util 2021-07-13T05:50:34,092 copying build/lib.linux-armv7l-3.9/immunedb/util/admin.py -> build/bdist.linux-armv7l/wheel/immunedb/util 2021-07-13T05:50:34,095 copying build/lib.linux-armv7l-3.9/immunedb/util/log.py -> build/bdist.linux-armv7l/wheel/immunedb/util 2021-07-13T05:50:34,098 copying build/lib.linux-armv7l-3.9/immunedb/util/nested_writer.py -> build/bdist.linux-armv7l/wheel/immunedb/util 2021-07-13T05:50:34,100 copying build/lib.linux-armv7l-3.9/immunedb/util/funcs.py -> build/bdist.linux-armv7l/wheel/immunedb/util 2021-07-13T05:50:34,103 copying build/lib.linux-armv7l-3.9/immunedb/util/hyper.py -> build/bdist.linux-armv7l/wheel/immunedb/util 2021-07-13T05:50:34,105 copying build/lib.linux-armv7l-3.9/immunedb/util/__init__.py -> build/bdist.linux-armv7l/wheel/immunedb/util 2021-07-13T05:50:34,107 copying build/lib.linux-armv7l-3.9/immunedb/util/concurrent.py -> build/bdist.linux-armv7l/wheel/immunedb/util 2021-07-13T05:50:34,110 copying build/lib.linux-armv7l-3.9/immunedb/util/lookups.py -> build/bdist.linux-armv7l/wheel/immunedb/util 2021-07-13T05:50:34,113 creating build/bdist.linux-armv7l/wheel/immunedb/api 2021-07-13T05:50:34,114 copying build/lib.linux-armv7l-3.9/immunedb/api/queries.py -> build/bdist.linux-armv7l/wheel/immunedb/api 2021-07-13T05:50:34,118 copying build/lib.linux-armv7l-3.9/immunedb/api/__init__.py -> build/bdist.linux-armv7l/wheel/immunedb/api 2021-07-13T05:50:34,120 copying build/lib.linux-armv7l-3.9/immunedb/api/rest_service.py -> build/bdist.linux-armv7l/wheel/immunedb/api 2021-07-13T05:50:34,124 creating build/bdist.linux-armv7l/wheel/immunedb/trees 2021-07-13T05:50:34,125 copying build/lib.linux-armv7l-3.9/immunedb/trees/__init__.py -> build/bdist.linux-armv7l/wheel/immunedb/trees 2021-07-13T05:50:34,128 copying build/lib.linux-armv7l-3.9/immunedb/trees/clearcut.py -> build/bdist.linux-armv7l/wheel/immunedb/trees 2021-07-13T05:50:34,131 copying build/lib.linux-armv7l-3.9/immunedb/__init__.py -> build/bdist.linux-armv7l/wheel/immunedb 2021-07-13T05:50:34,134 creating build/bdist.linux-armv7l/wheel/immunedb/exporting 2021-07-13T05:50:34,135 copying build/lib.linux-armv7l-3.9/immunedb/exporting/clone_export.py -> build/bdist.linux-armv7l/wheel/immunedb/exporting 2021-07-13T05:50:34,138 copying build/lib.linux-armv7l-3.9/immunedb/exporting/cli.py -> build/bdist.linux-armv7l/wheel/immunedb/exporting 2021-07-13T05:50:34,141 copying build/lib.linux-armv7l-3.9/immunedb/exporting/writers.py -> build/bdist.linux-armv7l/wheel/immunedb/exporting 2021-07-13T05:50:34,144 copying build/lib.linux-armv7l-3.9/immunedb/exporting/sequence_export.py -> build/bdist.linux-armv7l/wheel/immunedb/exporting 2021-07-13T05:50:34,147 copying build/lib.linux-armv7l-3.9/immunedb/exporting/__init__.py -> build/bdist.linux-armv7l/wheel/immunedb/exporting 2021-07-13T05:50:34,149 copying build/lib.linux-armv7l-3.9/immunedb/exporting/mutation_export.py -> build/bdist.linux-armv7l/wheel/immunedb/exporting 2021-07-13T05:50:34,151 copying build/lib.linux-armv7l-3.9/immunedb/exporting/export.py -> build/bdist.linux-armv7l/wheel/immunedb/exporting 2021-07-13T05:50:34,155 creating build/bdist.linux-armv7l/wheel/immunedb/identification 2021-07-13T05:50:34,155 copying build/lib.linux-armv7l-3.9/immunedb/identification/anchor.py -> build/bdist.linux-armv7l/wheel/immunedb/identification 2021-07-13T05:50:34,159 copying build/lib.linux-armv7l-3.9/immunedb/identification/genes.py -> build/bdist.linux-armv7l/wheel/immunedb/identification 2021-07-13T05:50:34,162 copying build/lib.linux-armv7l-3.9/immunedb/identification/vdj_sequence.py -> build/bdist.linux-armv7l/wheel/immunedb/identification 2021-07-13T05:50:34,164 copying build/lib.linux-armv7l-3.9/immunedb/identification/local_align.py -> build/bdist.linux-armv7l/wheel/immunedb/identification 2021-07-13T05:50:34,168 copying build/lib.linux-armv7l-3.9/immunedb/identification/metadata.py -> build/bdist.linux-armv7l/wheel/immunedb/identification 2021-07-13T05:50:34,170 copying build/lib.linux-armv7l-3.9/immunedb/identification/identify.py -> build/bdist.linux-armv7l/wheel/immunedb/identification 2021-07-13T05:50:34,174 copying build/lib.linux-armv7l-3.9/immunedb/identification/__init__.py -> build/bdist.linux-armv7l/wheel/immunedb/identification 2021-07-13T05:50:34,177 copying build/lib.linux-armv7l-3.9/dnautils.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel 2021-07-13T05:50:34,180 running install_egg_info 2021-07-13T05:50:34,205 running egg_info 2021-07-13T05:50:34,206 writing ImmuneDB.egg-info/PKG-INFO 2021-07-13T05:50:34,208 writing dependency_links to ImmuneDB.egg-info/dependency_links.txt 2021-07-13T05:50:34,210 writing requirements to ImmuneDB.egg-info/requires.txt 2021-07-13T05:50:34,211 writing top-level names to ImmuneDB.egg-info/top_level.txt 2021-07-13T05:50:34,221 reading manifest file 'ImmuneDB.egg-info/SOURCES.txt' 2021-07-13T05:50:34,230 writing manifest file 'ImmuneDB.egg-info/SOURCES.txt' 2021-07-13T05:50:34,231 Copying ImmuneDB.egg-info to build/bdist.linux-armv7l/wheel/ImmuneDB-0.23.0-py3.9.egg-info 2021-07-13T05:50:34,242 running install_scripts 2021-07-13T05:50:34,306 creating build/bdist.linux-armv7l/wheel/ImmuneDB-0.23.0.data 2021-07-13T05:50:34,306 creating build/bdist.linux-armv7l/wheel/ImmuneDB-0.23.0.data/scripts 2021-07-13T05:50:34,307 copying build/scripts-3.9/immunedb_identify -> build/bdist.linux-armv7l/wheel/ImmuneDB-0.23.0.data/scripts 2021-07-13T05:50:34,310 copying build/scripts-3.9/immunedb_local_align -> build/bdist.linux-armv7l/wheel/ImmuneDB-0.23.0.data/scripts 2021-07-13T05:50:34,312 copying build/scripts-3.9/immunedb_export -> build/bdist.linux-armv7l/wheel/ImmuneDB-0.23.0.data/scripts 2021-07-13T05:50:34,313 copying build/scripts-3.9/immunedb_rest -> build/bdist.linux-armv7l/wheel/ImmuneDB-0.23.0.data/scripts 2021-07-13T05:50:34,315 copying build/scripts-3.9/immunedb_clone_stats -> build/bdist.linux-armv7l/wheel/ImmuneDB-0.23.0.data/scripts 2021-07-13T05:50:34,317 copying build/scripts-3.9/run_tigger -> build/bdist.linux-armv7l/wheel/ImmuneDB-0.23.0.data/scripts 2021-07-13T05:50:34,319 copying build/scripts-3.9/immunedb_metadata -> build/bdist.linux-armv7l/wheel/ImmuneDB-0.23.0.data/scripts 2021-07-13T05:50:34,321 copying build/scripts-3.9/immunedb_sample_stats -> build/bdist.linux-armv7l/wheel/ImmuneDB-0.23.0.data/scripts 2021-07-13T05:50:34,323 copying build/scripts-3.9/immunedb_genotype -> build/bdist.linux-armv7l/wheel/ImmuneDB-0.23.0.data/scripts 2021-07-13T05:50:34,325 copying build/scripts-3.9/immunedb_clone_pressure -> build/bdist.linux-armv7l/wheel/ImmuneDB-0.23.0.data/scripts 2021-07-13T05:50:34,327 copying build/scripts-3.9/immunedb_clone_import -> build/bdist.linux-armv7l/wheel/ImmuneDB-0.23.0.data/scripts 2021-07-13T05:50:34,328 copying build/scripts-3.9/immunedb_admin -> build/bdist.linux-armv7l/wheel/ImmuneDB-0.23.0.data/scripts 2021-07-13T05:50:34,330 copying build/scripts-3.9/immunedb_clones -> build/bdist.linux-armv7l/wheel/ImmuneDB-0.23.0.data/scripts 2021-07-13T05:50:34,333 copying build/scripts-3.9/immunedb_import -> build/bdist.linux-armv7l/wheel/ImmuneDB-0.23.0.data/scripts 2021-07-13T05:50:34,335 copying build/scripts-3.9/immunedb_clone_trees -> build/bdist.linux-armv7l/wheel/ImmuneDB-0.23.0.data/scripts 2021-07-13T05:50:34,337 copying build/scripts-3.9/immunedb_collapse -> build/bdist.linux-armv7l/wheel/ImmuneDB-0.23.0.data/scripts 2021-07-13T05:50:34,339 copying build/scripts-3.9/immunedb_sql -> build/bdist.linux-armv7l/wheel/ImmuneDB-0.23.0.data/scripts 2021-07-13T05:50:34,340 changing mode of build/bdist.linux-armv7l/wheel/ImmuneDB-0.23.0.data/scripts/immunedb_identify to 755 2021-07-13T05:50:34,341 changing mode of build/bdist.linux-armv7l/wheel/ImmuneDB-0.23.0.data/scripts/immunedb_local_align to 755 2021-07-13T05:50:34,341 changing mode of build/bdist.linux-armv7l/wheel/ImmuneDB-0.23.0.data/scripts/immunedb_export to 755 2021-07-13T05:50:34,341 changing mode of build/bdist.linux-armv7l/wheel/ImmuneDB-0.23.0.data/scripts/immunedb_rest to 755 2021-07-13T05:50:34,342 changing mode of build/bdist.linux-armv7l/wheel/ImmuneDB-0.23.0.data/scripts/immunedb_clone_stats to 755 2021-07-13T05:50:34,342 changing mode of build/bdist.linux-armv7l/wheel/ImmuneDB-0.23.0.data/scripts/run_tigger to 755 2021-07-13T05:50:34,342 changing mode of build/bdist.linux-armv7l/wheel/ImmuneDB-0.23.0.data/scripts/immunedb_metadata to 755 2021-07-13T05:50:34,342 changing mode of build/bdist.linux-armv7l/wheel/ImmuneDB-0.23.0.data/scripts/immunedb_sample_stats to 755 2021-07-13T05:50:34,343 changing mode of build/bdist.linux-armv7l/wheel/ImmuneDB-0.23.0.data/scripts/immunedb_genotype to 755 2021-07-13T05:50:34,343 changing mode of build/bdist.linux-armv7l/wheel/ImmuneDB-0.23.0.data/scripts/immunedb_clone_pressure to 755 2021-07-13T05:50:34,343 changing mode of build/bdist.linux-armv7l/wheel/ImmuneDB-0.23.0.data/scripts/immunedb_clone_import to 755 2021-07-13T05:50:34,344 changing mode of build/bdist.linux-armv7l/wheel/ImmuneDB-0.23.0.data/scripts/immunedb_admin to 755 2021-07-13T05:50:34,344 changing mode of build/bdist.linux-armv7l/wheel/ImmuneDB-0.23.0.data/scripts/immunedb_clones to 755 2021-07-13T05:50:34,344 changing mode of build/bdist.linux-armv7l/wheel/ImmuneDB-0.23.0.data/scripts/immunedb_import to 755 2021-07-13T05:50:34,345 changing mode of build/bdist.linux-armv7l/wheel/ImmuneDB-0.23.0.data/scripts/immunedb_clone_trees to 755 2021-07-13T05:50:34,345 changing mode of build/bdist.linux-armv7l/wheel/ImmuneDB-0.23.0.data/scripts/immunedb_collapse to 755 2021-07-13T05:50:34,345 changing mode of build/bdist.linux-armv7l/wheel/ImmuneDB-0.23.0.data/scripts/immunedb_sql to 755 2021-07-13T05:50:34,375 creating build/bdist.linux-armv7l/wheel/ImmuneDB-0.23.0.dist-info/WHEEL 2021-07-13T05:50:34,378 creating '/tmp/pip-wheel-payi2glv/ImmuneDB-0.23.0-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2021-07-13T05:50:34,383 adding 'dnautils.cpython-39-arm-linux-gnueabihf.so' 2021-07-13T05:50:34,386 adding 'ImmuneDB-0.23.0.data/scripts/immunedb_admin' 2021-07-13T05:50:34,387 adding 'ImmuneDB-0.23.0.data/scripts/immunedb_clone_import' 2021-07-13T05:50:34,389 adding 'ImmuneDB-0.23.0.data/scripts/immunedb_clone_pressure' 2021-07-13T05:50:34,390 adding 'ImmuneDB-0.23.0.data/scripts/immunedb_clone_stats' 2021-07-13T05:50:34,392 adding 'ImmuneDB-0.23.0.data/scripts/immunedb_clone_trees' 2021-07-13T05:50:34,393 adding 'ImmuneDB-0.23.0.data/scripts/immunedb_clones' 2021-07-13T05:50:34,394 adding 'ImmuneDB-0.23.0.data/scripts/immunedb_collapse' 2021-07-13T05:50:34,396 adding 'ImmuneDB-0.23.0.data/scripts/immunedb_export' 2021-07-13T05:50:34,397 adding 'ImmuneDB-0.23.0.data/scripts/immunedb_genotype' 2021-07-13T05:50:34,399 adding 'ImmuneDB-0.23.0.data/scripts/immunedb_identify' 2021-07-13T05:50:34,400 adding 'ImmuneDB-0.23.0.data/scripts/immunedb_import' 2021-07-13T05:50:34,402 adding 'ImmuneDB-0.23.0.data/scripts/immunedb_local_align' 2021-07-13T05:50:34,403 adding 'ImmuneDB-0.23.0.data/scripts/immunedb_metadata' 2021-07-13T05:50:34,404 adding 'ImmuneDB-0.23.0.data/scripts/immunedb_rest' 2021-07-13T05:50:34,405 adding 'ImmuneDB-0.23.0.data/scripts/immunedb_sample_stats' 2021-07-13T05:50:34,406 adding 'ImmuneDB-0.23.0.data/scripts/immunedb_sql' 2021-07-13T05:50:34,407 adding 'ImmuneDB-0.23.0.data/scripts/run_tigger' 2021-07-13T05:50:34,410 adding 'immunedb/__init__.py' 2021-07-13T05:50:34,412 adding 'immunedb/aggregation/__init__.py' 2021-07-13T05:50:34,413 adding 'immunedb/aggregation/clone_stats.py' 2021-07-13T05:50:34,416 adding 'immunedb/aggregation/clones.py' 2021-07-13T05:50:34,417 adding 'immunedb/aggregation/collapse.py' 2021-07-13T05:50:34,419 adding 'immunedb/aggregation/sample_stats.py' 2021-07-13T05:50:34,421 adding 'immunedb/api/__init__.py' 2021-07-13T05:50:34,425 adding 'immunedb/api/queries.py' 2021-07-13T05:50:34,427 adding 'immunedb/api/rest_service.py' 2021-07-13T05:50:34,429 adding 'immunedb/common/__init__.py' 2021-07-13T05:50:34,431 adding 'immunedb/common/baseline.py' 2021-07-13T05:50:34,433 adding 'immunedb/common/config.py' 2021-07-13T05:50:34,436 adding 'immunedb/common/models.py' 2021-07-13T05:50:34,438 adding 'immunedb/common/modification_log.py' 2021-07-13T05:50:34,440 adding 'immunedb/common/mutations.py' 2021-07-13T05:50:34,442 adding 'immunedb/exporting/__init__.py' 2021-07-13T05:50:34,443 adding 'immunedb/exporting/cli.py' 2021-07-13T05:50:34,445 adding 'immunedb/exporting/clone_export.py' 2021-07-13T05:50:34,446 adding 'immunedb/exporting/export.py' 2021-07-13T05:50:34,447 adding 'immunedb/exporting/mutation_export.py' 2021-07-13T05:50:34,449 adding 'immunedb/exporting/sequence_export.py' 2021-07-13T05:50:34,450 adding 'immunedb/exporting/writers.py' 2021-07-13T05:50:34,452 adding 'immunedb/identification/__init__.py' 2021-07-13T05:50:34,454 adding 'immunedb/identification/anchor.py' 2021-07-13T05:50:34,456 adding 'immunedb/identification/genes.py' 2021-07-13T05:50:34,458 adding 'immunedb/identification/identify.py' 2021-07-13T05:50:34,461 adding 'immunedb/identification/local_align.py' 2021-07-13T05:50:34,463 adding 'immunedb/identification/metadata.py' 2021-07-13T05:50:34,464 adding 'immunedb/identification/vdj_sequence.py' 2021-07-13T05:50:34,466 adding 'immunedb/importing/__init__.py' 2021-07-13T05:50:34,468 adding 'immunedb/importing/clones.py' 2021-07-13T05:50:34,469 adding 'immunedb/importing/delimited.py' 2021-07-13T05:50:34,472 adding 'immunedb/trees/__init__.py' 2021-07-13T05:50:34,473 adding 'immunedb/trees/clearcut.py' 2021-07-13T05:50:34,475 adding 'immunedb/util/__init__.py' 2021-07-13T05:50:34,477 adding 'immunedb/util/admin.py' 2021-07-13T05:50:34,478 adding 'immunedb/util/concurrent.py' 2021-07-13T05:50:34,480 adding 'immunedb/util/funcs.py' 2021-07-13T05:50:34,481 adding 'immunedb/util/hyper.py' 2021-07-13T05:50:34,482 adding 'immunedb/util/log.py' 2021-07-13T05:50:34,484 adding 'immunedb/util/lookups.py' 2021-07-13T05:50:34,485 adding 'immunedb/util/nested_writer.py' 2021-07-13T05:50:34,486 adding 'ImmuneDB-0.23.0.dist-info/METADATA' 2021-07-13T05:50:34,487 adding 'ImmuneDB-0.23.0.dist-info/WHEEL' 2021-07-13T05:50:34,488 adding 'ImmuneDB-0.23.0.dist-info/top_level.txt' 2021-07-13T05:50:34,490 adding 'ImmuneDB-0.23.0.dist-info/RECORD' 2021-07-13T05:50:34,493 removing build/bdist.linux-armv7l/wheel 2021-07-13T05:50:34,606 Building wheel for immunedb (setup.py): finished with status 'done' 2021-07-13T05:50:34,610 Created wheel for immunedb: filename=ImmuneDB-0.23.0-cp39-cp39-linux_armv7l.whl size=100035 sha256=f329d0ae28e70efa98f9efc4f8cc678a4fd0ef472871d3fc059843e36500b85c 2021-07-13T05:50:34,610 Stored in directory: /tmp/pip-ephem-wheel-cache-jdmk07q5/wheels/df/d9/62/989f77ac5b050a98ea4d10e08d34ae74b84b3d8e4f25aa74c3 2021-07-13T05:50:34,622 Successfully built immunedb 2021-07-13T05:50:34,629 Removed build tracker: '/tmp/pip-req-tracker-3689mqze'