2021-07-13T06:08:52,679 Created temporary directory: /tmp/pip-ephem-wheel-cache-55arcpek
2021-07-13T06:08:52,682 Created temporary directory: /tmp/pip-req-tracker-3znxbdv9
2021-07-13T06:08:52,682 Initialized build tracking at /tmp/pip-req-tracker-3znxbdv9
2021-07-13T06:08:52,683 Created build tracker: /tmp/pip-req-tracker-3znxbdv9
2021-07-13T06:08:52,683 Entered build tracker: /tmp/pip-req-tracker-3znxbdv9
2021-07-13T06:08:52,683 Created temporary directory: /tmp/pip-wheel-oq__6hrh
2021-07-13T06:08:52,711 1 location(s) to search for versions of disptools:
2021-07-13T06:08:52,711 * https://pypi.org/simple/disptools/
2021-07-13T06:08:52,711 Fetching project page and analyzing links: https://pypi.org/simple/disptools/
2021-07-13T06:08:52,712 Getting page https://pypi.org/simple/disptools/
2021-07-13T06:08:52,714 Found index url https://pypi.org/simple
2021-07-13T06:08:52,915   Skipping link: none of the wheel's tags (cp36-cp36m-win_amd64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/09/f5/d2401414d689187afdb9d47c8af53a0afb6de4eca14412344db13c38ce61/disptools-0.1.1-cp36-cp36m-win_amd64.whl#sha256=d70dd06783d02de5445adac2776c2357a09e613e5adf1ef066c20af3cebd6006 (from https://pypi.org/simple/disptools/)
2021-07-13T06:08:52,916   Found link https://files.pythonhosted.org/packages/48/8c/4edfe8c6b8e1331a9d796c637c21ab45695eb1c4363745f03f12e4db1432/disptools-0.1.1.tar.gz#sha256=81efd7e653db55b1c9b2cd4dcf1fdcd621ea01ca658118ed3596b63fe13d137b (from https://pypi.org/simple/disptools/), version: 0.1.1
2021-07-13T06:08:52,916   Skipping link: none of the wheel's tags (cp36-cp36m-win_amd64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/b0/04/f23f66b17e48605ae558118b15ae9db232e18fbfde16db52f523c359bb51/disptools-0.2.0-cp36-cp36m-win_amd64.whl#sha256=76525308384980641a98b9ae02d3130cc557125079694793a8f28573af476a60 (from https://pypi.org/simple/disptools/)
2021-07-13T06:08:52,917   Found link https://files.pythonhosted.org/packages/c9/50/80c625e9ec9248f2f6d58b3d422ec7a9cf46760a3c8f6f281635972b70ec/disptools-0.2.0.tar.gz#sha256=77541cca40043fad6d1a2517b10da7b41f4a1564cd1c88b6b38de098bcf7cc8b (from https://pypi.org/simple/disptools/), version: 0.2.0
2021-07-13T06:08:52,917   Skipping link: none of the wheel's tags (cp36-cp36m-win_amd64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/b4/7b/61bfa5cdd49d9149df766ab02715022727a081c071a73e54e17a171bc88d/disptools-0.2.1-cp36-cp36m-win_amd64.whl#sha256=921515250abe7a510ece04c0d4bff443e89cfd8e64a4ef11a24e69fc6cc7ce7f (from https://pypi.org/simple/disptools/)
2021-07-13T06:08:52,917   Found link https://files.pythonhosted.org/packages/67/5e/1b0a5928c857ebc7f9e9638b2923138686634b55eb3a759e7a34d9d092a2/disptools-0.2.1.tar.gz#sha256=ef6eff7de82c103f68480f5385c5555d493f43949b9621fbd5a5eb0f9e7462f3 (from https://pypi.org/simple/disptools/), version: 0.2.1
2021-07-13T06:08:52,918   Skipping link: none of the wheel's tags (cp36-cp36m-win_amd64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/a4/4b/e83aab22b3fd6702afe15870a191d70f0653c2c85d6fba713a529b9b9ddf/disptools-0.2.2-cp36-cp36m-win_amd64.whl#sha256=e425aba17361a6188e87510595d333391bd070281bd054105e98532b2a8ada59 (from https://pypi.org/simple/disptools/)
2021-07-13T06:08:52,918   Found link https://files.pythonhosted.org/packages/77/a0/a3f018c03f43f45980928a0eea7a0299fc29457a6b03bc40670492d41a34/disptools-0.2.2.tar.gz#sha256=1230fdf7bf3e8d246a88dd3ba4e10361a6aaf0085631f42cf45c3bee5d47bba4 (from https://pypi.org/simple/disptools/), version: 0.2.2
2021-07-13T06:08:52,919   Skipping link: none of the wheel's tags (cp36-cp36m-win_amd64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/01/f6/fcb159945047012439ba8b0ba94810e9a49d53b514b6efab8e03b97c5e04/disptools-0.2.3-cp36-cp36m-win_amd64.whl#sha256=a68bec139802bdfa74b0b420936180006ae11296775aa56bef76407e2b3bb163 (from https://pypi.org/simple/disptools/)
2021-07-13T06:08:52,919   Found link https://files.pythonhosted.org/packages/81/f6/227fe2a960ab64ec007bf4f90a12d4e09fbfd543f7218c4bc7d17925ca99/disptools-0.2.3.tar.gz#sha256=23fc61a2f5157c6442ec53449136c5e4ee4945468dd93f6abdce1846820788c2 (from https://pypi.org/simple/disptools/), version: 0.2.3
2021-07-13T06:08:52,919   Skipping link: none of the wheel's tags (cp36-cp36m-win_amd64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/e5/a3/6932fbe98b0c117f3d210c69010867177414d0b24f844de8d0ddbe883cd4/disptools-0.3.0-cp36-cp36m-win_amd64.whl#sha256=2485f12cea83607f643af5c763b1df2b36b02a376e3e6358ad804dc7b522f14d (from https://pypi.org/simple/disptools/)
2021-07-13T06:08:52,920   Found link https://files.pythonhosted.org/packages/53/de/b566d2baab74a75f3d3c07d4b9dd42ecb958e2cd7a8c38cfd045d476f7dc/disptools-0.3.0.tar.gz#sha256=31e9180366a2fba44b66785289b3267a1f62937d1f773f4a26c9d76a8199024e (from https://pypi.org/simple/disptools/), version: 0.3.0
2021-07-13T06:08:52,920   Skipping link: none of the wheel's tags (cp35-cp35m-win32) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/56/bd/f36e3712d4851ba711106bef50c27ed9428bebfe43cdedcf451cc10f6698/disptools-0.4.0-cp35-cp35m-win32.whl#sha256=4b34c6f0107ece4a3f76546fce5f9c7fe4f9f21772bc3eee0c7c20fc1ecb5849 (from https://pypi.org/simple/disptools/)
2021-07-13T06:08:52,921   Skipping link: none of the wheel's tags (cp35-cp35m-win_amd64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/f1/92/e1b447244c64aff988451acb3eb401880c3ef8c8c8c0729e1776caf04bcb/disptools-0.4.0-cp35-cp35m-win_amd64.whl#sha256=e00a0db6c4e8d221338e3b23fa8a9bdbabaf5474707a2db48eba9cebfd36a0ea (from https://pypi.org/simple/disptools/)
2021-07-13T06:08:52,921   Skipping link: none of the wheel's tags (cp36-cp36m-win32) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/09/f2/f5e2bb26c4a0a8de04d7fa90673b530c0ab8ea352de0ca988a6b2f5afa3d/disptools-0.4.0-cp36-cp36m-win32.whl#sha256=6d7b1f20c3c832f3da7996320a8086c45b42228206233897394598e444889c38 (from https://pypi.org/simple/disptools/)
2021-07-13T06:08:52,922   Skipping link: none of the wheel's tags (cp36-cp36m-win_amd64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/0f/30/b11ee89537832425c2e28934090a304286b550cf82c211a6a1d852621300/disptools-0.4.0-cp36-cp36m-win_amd64.whl#sha256=177dc719e474894cd4de4a9e8531941b014960340db1d304bc6079b65b4e1a44 (from https://pypi.org/simple/disptools/)
2021-07-13T06:08:52,922   Skipping link: none of the wheel's tags (cp37-cp37m-win32) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/81/c1/d8ef50833bc91097ff8394d9fd9d3daccb113c632e4ee5f0f3e9ec599d0b/disptools-0.4.0-cp37-cp37m-win32.whl#sha256=d6bcfcd7578aec19067e6631ce948323d67fde92554b091d41c81d9ca095685c (from https://pypi.org/simple/disptools/)
2021-07-13T06:08:52,922   Skipping link: none of the wheel's tags (cp37-cp37m-win_amd64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/a3/41/00e0f3ac929fb30b775785563b5100261f541fbdd2e0a90216c0195078a1/disptools-0.4.0-cp37-cp37m-win_amd64.whl#sha256=175f181806aa17b4b0de585ccce26408c24e4eb1113d5fa8cdf8aa0858eb2e33 (from https://pypi.org/simple/disptools/)
2021-07-13T06:08:52,923   Found link https://files.pythonhosted.org/packages/c2/c3/b59544ca5f962d3b894e5d4f149180db45c39b86cc0eb55e2dd64beeb175/disptools-0.4.0.tar.gz#sha256=3244787ff59a16143aa24d1aca6193a5c7b972260a534f6ea7af4b9c3d15bd97 (from https://pypi.org/simple/disptools/), version: 0.4.0
2021-07-13T06:08:52,923 Skipping link: not a file: https://pypi.org/simple/disptools/
2021-07-13T06:08:52,925 Given no hashes to check 1 links for project 'disptools': discarding no candidates
2021-07-13T06:08:52,944 Collecting disptools==0.1.1
2021-07-13T06:08:52,945   Created temporary directory: /tmp/pip-unpack-jjaftepe
2021-07-13T06:08:53,149   Downloading disptools-0.1.1.tar.gz (45 kB)
2021-07-13T06:08:53,242   Added disptools==0.1.1 from https://files.pythonhosted.org/packages/48/8c/4edfe8c6b8e1331a9d796c637c21ab45695eb1c4363745f03f12e4db1432/disptools-0.1.1.tar.gz#sha256=81efd7e653db55b1c9b2cd4dcf1fdcd621ea01ca658118ed3596b63fe13d137b to build tracker '/tmp/pip-req-tracker-3znxbdv9'
2021-07-13T06:08:53,243     Running setup.py (path:/tmp/pip-wheel-oq__6hrh/disptools_2ff15e49a0f6465fa45017771aa9507d/setup.py) egg_info for package disptools
2021-07-13T06:08:53,243     Created temporary directory: /tmp/pip-pip-egg-info-v_n27mu0
2021-07-13T06:08:53,244     Running command python setup.py egg_info
2021-07-13T06:08:54,734     running egg_info
2021-07-13T06:08:54,736     creating /tmp/pip-pip-egg-info-v_n27mu0/disptools.egg-info
2021-07-13T06:08:54,737     writing /tmp/pip-pip-egg-info-v_n27mu0/disptools.egg-info/PKG-INFO
2021-07-13T06:08:54,740     writing dependency_links to /tmp/pip-pip-egg-info-v_n27mu0/disptools.egg-info/dependency_links.txt
2021-07-13T06:08:54,742     writing requirements to /tmp/pip-pip-egg-info-v_n27mu0/disptools.egg-info/requires.txt
2021-07-13T06:08:54,743     writing top-level names to /tmp/pip-pip-egg-info-v_n27mu0/disptools.egg-info/top_level.txt
2021-07-13T06:08:54,745     writing manifest file '/tmp/pip-pip-egg-info-v_n27mu0/disptools.egg-info/SOURCES.txt'
2021-07-13T06:08:54,893     reading manifest file '/tmp/pip-pip-egg-info-v_n27mu0/disptools.egg-info/SOURCES.txt'
2021-07-13T06:08:54,896     writing manifest file '/tmp/pip-pip-egg-info-v_n27mu0/disptools.egg-info/SOURCES.txt'
2021-07-13T06:08:55,013   Source in /tmp/pip-wheel-oq__6hrh/disptools_2ff15e49a0f6465fa45017771aa9507d has version 0.1.1, which satisfies requirement disptools==0.1.1 from https://files.pythonhosted.org/packages/48/8c/4edfe8c6b8e1331a9d796c637c21ab45695eb1c4363745f03f12e4db1432/disptools-0.1.1.tar.gz#sha256=81efd7e653db55b1c9b2cd4dcf1fdcd621ea01ca658118ed3596b63fe13d137b
2021-07-13T06:08:55,014   Removed disptools==0.1.1 from https://files.pythonhosted.org/packages/48/8c/4edfe8c6b8e1331a9d796c637c21ab45695eb1c4363745f03f12e4db1432/disptools-0.1.1.tar.gz#sha256=81efd7e653db55b1c9b2cd4dcf1fdcd621ea01ca658118ed3596b63fe13d137b from build tracker '/tmp/pip-req-tracker-3znxbdv9'
2021-07-13T06:08:55,020 Created temporary directory: /tmp/pip-unpack-kev9qinh
2021-07-13T06:08:55,020 Building wheels for collected packages: disptools
2021-07-13T06:08:55,038   Created temporary directory: /tmp/pip-wheel-8bok__ox
2021-07-13T06:08:55,039   Building wheel for disptools (setup.py): started
2021-07-13T06:08:55,039   Destination directory: /tmp/pip-wheel-8bok__ox
2021-07-13T06:08:55,040   Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-oq__6hrh/disptools_2ff15e49a0f6465fa45017771aa9507d/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-oq__6hrh/disptools_2ff15e49a0f6465fa45017771aa9507d/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-8bok__ox
2021-07-13T06:08:57,049   running bdist_wheel
2021-07-13T06:08:57,054   running build
2021-07-13T06:08:57,054   running build_py
2021-07-13T06:08:57,189   creating build
2021-07-13T06:08:57,189   creating build/lib.linux-armv7l-3.9
2021-07-13T06:08:57,190   creating build/lib.linux-armv7l-3.9/disptools
2021-07-13T06:08:57,191   copying disptools/predict.py -> build/lib.linux-armv7l-3.9/disptools
2021-07-13T06:08:57,193   copying disptools/drawing.py -> build/lib.linux-armv7l-3.9/disptools
2021-07-13T06:08:57,196   copying disptools/simulatrophy.py -> build/lib.linux-armv7l-3.9/disptools
2021-07-13T06:08:57,197   copying disptools/displacements.py -> build/lib.linux-armv7l-3.9/disptools
2021-07-13T06:08:57,203   copying disptools/measure.py -> build/lib.linux-armv7l-3.9/disptools
2021-07-13T06:08:57,205   copying disptools/__init__.py -> build/lib.linux-armv7l-3.9/disptools
2021-07-13T06:08:57,207   copying disptools/io.py -> build/lib.linux-armv7l-3.9/disptools
2021-07-13T06:08:57,210   running build_ext
2021-07-13T06:08:57,214   extra_compile_args: ['-Wall', '-std=c99', '-fPIC', '-fopenmp']
2021-07-13T06:08:57,215   extra_link_args: ['-lm', '-lgomp']
2021-07-13T06:08:57,215   building '_disptools' extension
2021-07-13T06:08:57,384   Warning: Can't read registry to find the necessary compiler setting
2021-07-13T06:08:57,385   Make sure that Python modules winreg, win32api or win32con are installed.
2021-07-13T06:08:57,831   C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC

2021-07-13T06:08:57,832   creating build/temp.linux-armv7l-3.9
2021-07-13T06:08:57,833   creating build/temp.linux-armv7l-3.9/src
2021-07-13T06:08:57,834   compile options: '-DDISPTOOLS_VERBOSE=1 -DORDER_PD=4 -DFLOAT_SIZE=32 -DDISPTOOLS_DEBUG=0 -Isrc/headers -I/usr/include/python3.9 -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c'
2021-07-13T06:08:57,834   extra options: '-Wall -std=c99 -fPIC -fopenmp'
2021-07-13T06:08:57,855   arm-linux-gnueabihf-gcc: src/VolumeMatching3D.carm-linux-gnueabihf-gcc: src/_disptools.c
2021-07-13T06:08:57,856   arm-linux-gnueabihf-gcc: src/displacement_field_gradient.c
2021-07-13T06:08:57,856   arm-linux-gnueabihf-gcc: src/displacement_field_greedy.c

2021-07-13T06:08:57,986   src/displacement_field_gradient.c:8:10: fatal error: headers/field.h: No such file or directory
2021-07-13T06:08:57,987       8 | #include "headers/field.h"
2021-07-13T06:08:57,987         |          ^~~~~~~~~~~~~~~~~
2021-07-13T06:08:57,988   compilation terminated.
2021-07-13T06:08:57,992   arm-linux-gnueabihf-gcc: src/field.c
2021-07-13T06:08:58,002   src/displacement_field_greedy.c:8:10: fatal error: headers/field.h: No such file or directory
2021-07-13T06:08:58,002       8 | #include "headers/field.h"
2021-07-13T06:08:58,003         |          ^~~~~~~~~~~~~~~~~
2021-07-13T06:08:58,003   compilation terminated.
2021-07-13T06:08:58,007   arm-linux-gnueabihf-gcc: src/jacobian.c
2021-07-13T06:08:58,088   src/VolumeMatching3D.c:37:10: fatal error: headers/field.h: No such file or directory
2021-07-13T06:08:58,089      37 | #include "headers/field.h"
2021-07-13T06:08:58,089         |          ^~~~~~~~~~~~~~~~~
2021-07-13T06:08:58,090   compilation terminated.
2021-07-13T06:08:58,093   src/jacobian.c:1:10: fatal error: headers/jacobian.h: No such file or directory
2021-07-13T06:08:58,093       1 | #include "headers/jacobian.h"
2021-07-13T06:08:58,093         |          ^~~~~~~~~~~~~~~~~~~~
2021-07-13T06:08:58,094   compilation terminated.
2021-07-13T06:08:58,097   arm-linux-gnueabihf-gcc: src/shape_descriptors.c
2021-07-13T06:08:58,126   src/field.c:6:10: fatal error: headers/field.h: No such file or directory
2021-07-13T06:08:58,126       6 | #include "headers/field.h"
2021-07-13T06:08:58,127         |          ^~~~~~~~~~~~~~~~~
2021-07-13T06:08:58,127   compilation terminated.
2021-07-13T06:08:58,283   src/shape_descriptors.c:4:10: fatal error: headers/shape_descriptors.h: No such file or directory
2021-07-13T06:08:58,283       4 | #include "headers/shape_descriptors.h"
2021-07-13T06:08:58,284         |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-13T06:08:58,284   compilation terminated.
2021-07-13T06:08:58,472   src/_disptools.c:13:10: fatal error: headers/field.h: No such file or directory
2021-07-13T06:08:58,473      13 | #include "headers/field.h"
2021-07-13T06:08:58,473         |          ^~~~~~~~~~~~~~~~~
2021-07-13T06:08:58,473   compilation terminated.
2021-07-13T06:08:58,482   error: Command "arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DDISPTOOLS_VERBOSE=1 -DORDER_PD=4 -DFLOAT_SIZE=32 -DDISPTOOLS_DEBUG=0 -Isrc/headers -I/usr/include/python3.9 -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c src/displacement_field_gradient.c -o build/temp.linux-armv7l-3.9/src/displacement_field_gradient.o -Wall -std=c99 -fPIC -fopenmp" failed with exit status 1
2021-07-13T06:08:58,642   Building wheel for disptools (setup.py): finished with status 'error'
2021-07-13T06:08:58,642   ERROR: Failed building wheel for disptools
2021-07-13T06:08:58,643   Running setup.py clean for disptools
2021-07-13T06:08:58,643   Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-oq__6hrh/disptools_2ff15e49a0f6465fa45017771aa9507d/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-oq__6hrh/disptools_2ff15e49a0f6465fa45017771aa9507d/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' clean --all
2021-07-13T06:09:00,021   running clean
2021-07-13T06:09:00,023   removing 'build/temp.linux-armv7l-3.9' (and everything under it)
2021-07-13T06:09:00,025   removing 'build/lib.linux-armv7l-3.9' (and everything under it)
2021-07-13T06:09:00,028   'build/bdist.linux-armv7l' does not exist -- can't clean it
2021-07-13T06:09:00,029   'build/scripts-3.9' does not exist -- can't clean it
2021-07-13T06:09:00,029   removing 'build'
2021-07-13T06:09:00,134 Failed to build disptools
2021-07-13T06:09:00,135 ERROR: Failed to build one or more wheels
2021-07-13T06:09:00,136 Exception information:
2021-07-13T06:09:00,136 Traceback (most recent call last):
2021-07-13T06:09:00,136   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/cli/base_command.py", line 180, in _main
2021-07-13T06:09:00,136     status = self.run(options, args)
2021-07-13T06:09:00,136   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/cli/req_command.py", line 205, in wrapper
2021-07-13T06:09:00,136     return func(self, options, args)
2021-07-13T06:09:00,136   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/commands/wheel.py", line 174, in run
2021-07-13T06:09:00,136     raise CommandError(
2021-07-13T06:09:00,136 pip._internal.exceptions.CommandError: Failed to build one or more wheels
2021-07-13T06:09:00,138 Removed build tracker: '/tmp/pip-req-tracker-3znxbdv9'