2021-07-13T08:19:47,808 Created temporary directory: /tmp/pip-ephem-wheel-cache-mf67bv0r 2021-07-13T08:19:47,811 Created temporary directory: /tmp/pip-req-tracker-z0_cwnhq 2021-07-13T08:19:47,812 Initialized build tracking at /tmp/pip-req-tracker-z0_cwnhq 2021-07-13T08:19:47,812 Created build tracker: /tmp/pip-req-tracker-z0_cwnhq 2021-07-13T08:19:47,812 Entered build tracker: /tmp/pip-req-tracker-z0_cwnhq 2021-07-13T08:19:47,813 Created temporary directory: /tmp/pip-wheel-wlirz05m 2021-07-13T08:19:47,848 1 location(s) to search for versions of disptools: 2021-07-13T08:19:47,848 * https://pypi.org/simple/disptools/ 2021-07-13T08:19:47,848 Fetching project page and analyzing links: https://pypi.org/simple/disptools/ 2021-07-13T08:19:47,849 Getting page https://pypi.org/simple/disptools/ 2021-07-13T08:19:47,850 Found index url https://pypi.org/simple 2021-07-13T08:19:47,967 Skipping link: none of the wheel's tags (cp36-cp36m-win_amd64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/09/f5/d2401414d689187afdb9d47c8af53a0afb6de4eca14412344db13c38ce61/disptools-0.1.1-cp36-cp36m-win_amd64.whl#sha256=d70dd06783d02de5445adac2776c2357a09e613e5adf1ef066c20af3cebd6006 (from https://pypi.org/simple/disptools/) 2021-07-13T08:19:47,968 Found link https://files.pythonhosted.org/packages/48/8c/4edfe8c6b8e1331a9d796c637c21ab45695eb1c4363745f03f12e4db1432/disptools-0.1.1.tar.gz#sha256=81efd7e653db55b1c9b2cd4dcf1fdcd621ea01ca658118ed3596b63fe13d137b (from https://pypi.org/simple/disptools/), version: 0.1.1 2021-07-13T08:19:47,968 Skipping link: none of the wheel's tags (cp36-cp36m-win_amd64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/b0/04/f23f66b17e48605ae558118b15ae9db232e18fbfde16db52f523c359bb51/disptools-0.2.0-cp36-cp36m-win_amd64.whl#sha256=76525308384980641a98b9ae02d3130cc557125079694793a8f28573af476a60 (from https://pypi.org/simple/disptools/) 2021-07-13T08:19:47,969 Found link https://files.pythonhosted.org/packages/c9/50/80c625e9ec9248f2f6d58b3d422ec7a9cf46760a3c8f6f281635972b70ec/disptools-0.2.0.tar.gz#sha256=77541cca40043fad6d1a2517b10da7b41f4a1564cd1c88b6b38de098bcf7cc8b (from https://pypi.org/simple/disptools/), version: 0.2.0 2021-07-13T08:19:47,969 Skipping link: none of the wheel's tags (cp36-cp36m-win_amd64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/b4/7b/61bfa5cdd49d9149df766ab02715022727a081c071a73e54e17a171bc88d/disptools-0.2.1-cp36-cp36m-win_amd64.whl#sha256=921515250abe7a510ece04c0d4bff443e89cfd8e64a4ef11a24e69fc6cc7ce7f (from https://pypi.org/simple/disptools/) 2021-07-13T08:19:47,969 Found link https://files.pythonhosted.org/packages/67/5e/1b0a5928c857ebc7f9e9638b2923138686634b55eb3a759e7a34d9d092a2/disptools-0.2.1.tar.gz#sha256=ef6eff7de82c103f68480f5385c5555d493f43949b9621fbd5a5eb0f9e7462f3 (from https://pypi.org/simple/disptools/), version: 0.2.1 2021-07-13T08:19:47,970 Skipping link: none of the wheel's tags (cp36-cp36m-win_amd64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/a4/4b/e83aab22b3fd6702afe15870a191d70f0653c2c85d6fba713a529b9b9ddf/disptools-0.2.2-cp36-cp36m-win_amd64.whl#sha256=e425aba17361a6188e87510595d333391bd070281bd054105e98532b2a8ada59 (from https://pypi.org/simple/disptools/) 2021-07-13T08:19:47,970 Found link https://files.pythonhosted.org/packages/77/a0/a3f018c03f43f45980928a0eea7a0299fc29457a6b03bc40670492d41a34/disptools-0.2.2.tar.gz#sha256=1230fdf7bf3e8d246a88dd3ba4e10361a6aaf0085631f42cf45c3bee5d47bba4 (from https://pypi.org/simple/disptools/), version: 0.2.2 2021-07-13T08:19:47,971 Skipping link: none of the wheel's tags (cp36-cp36m-win_amd64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/01/f6/fcb159945047012439ba8b0ba94810e9a49d53b514b6efab8e03b97c5e04/disptools-0.2.3-cp36-cp36m-win_amd64.whl#sha256=a68bec139802bdfa74b0b420936180006ae11296775aa56bef76407e2b3bb163 (from https://pypi.org/simple/disptools/) 2021-07-13T08:19:47,971 Found link https://files.pythonhosted.org/packages/81/f6/227fe2a960ab64ec007bf4f90a12d4e09fbfd543f7218c4bc7d17925ca99/disptools-0.2.3.tar.gz#sha256=23fc61a2f5157c6442ec53449136c5e4ee4945468dd93f6abdce1846820788c2 (from https://pypi.org/simple/disptools/), version: 0.2.3 2021-07-13T08:19:47,971 Skipping link: none of the wheel's tags (cp36-cp36m-win_amd64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/e5/a3/6932fbe98b0c117f3d210c69010867177414d0b24f844de8d0ddbe883cd4/disptools-0.3.0-cp36-cp36m-win_amd64.whl#sha256=2485f12cea83607f643af5c763b1df2b36b02a376e3e6358ad804dc7b522f14d (from https://pypi.org/simple/disptools/) 2021-07-13T08:19:47,972 Found link https://files.pythonhosted.org/packages/53/de/b566d2baab74a75f3d3c07d4b9dd42ecb958e2cd7a8c38cfd045d476f7dc/disptools-0.3.0.tar.gz#sha256=31e9180366a2fba44b66785289b3267a1f62937d1f773f4a26c9d76a8199024e (from https://pypi.org/simple/disptools/), version: 0.3.0 2021-07-13T08:19:47,972 Skipping link: none of the wheel's tags (cp35-cp35m-win32) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/56/bd/f36e3712d4851ba711106bef50c27ed9428bebfe43cdedcf451cc10f6698/disptools-0.4.0-cp35-cp35m-win32.whl#sha256=4b34c6f0107ece4a3f76546fce5f9c7fe4f9f21772bc3eee0c7c20fc1ecb5849 (from https://pypi.org/simple/disptools/) 2021-07-13T08:19:47,973 Skipping link: none of the wheel's tags (cp35-cp35m-win_amd64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/f1/92/e1b447244c64aff988451acb3eb401880c3ef8c8c8c0729e1776caf04bcb/disptools-0.4.0-cp35-cp35m-win_amd64.whl#sha256=e00a0db6c4e8d221338e3b23fa8a9bdbabaf5474707a2db48eba9cebfd36a0ea (from https://pypi.org/simple/disptools/) 2021-07-13T08:19:47,973 Skipping link: none of the wheel's tags (cp36-cp36m-win32) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/09/f2/f5e2bb26c4a0a8de04d7fa90673b530c0ab8ea352de0ca988a6b2f5afa3d/disptools-0.4.0-cp36-cp36m-win32.whl#sha256=6d7b1f20c3c832f3da7996320a8086c45b42228206233897394598e444889c38 (from https://pypi.org/simple/disptools/) 2021-07-13T08:19:47,974 Skipping link: none of the wheel's tags (cp36-cp36m-win_amd64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/0f/30/b11ee89537832425c2e28934090a304286b550cf82c211a6a1d852621300/disptools-0.4.0-cp36-cp36m-win_amd64.whl#sha256=177dc719e474894cd4de4a9e8531941b014960340db1d304bc6079b65b4e1a44 (from https://pypi.org/simple/disptools/) 2021-07-13T08:19:47,974 Skipping link: none of the wheel's tags (cp37-cp37m-win32) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/81/c1/d8ef50833bc91097ff8394d9fd9d3daccb113c632e4ee5f0f3e9ec599d0b/disptools-0.4.0-cp37-cp37m-win32.whl#sha256=d6bcfcd7578aec19067e6631ce948323d67fde92554b091d41c81d9ca095685c (from https://pypi.org/simple/disptools/) 2021-07-13T08:19:47,974 Skipping link: none of the wheel's tags (cp37-cp37m-win_amd64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/a3/41/00e0f3ac929fb30b775785563b5100261f541fbdd2e0a90216c0195078a1/disptools-0.4.0-cp37-cp37m-win_amd64.whl#sha256=175f181806aa17b4b0de585ccce26408c24e4eb1113d5fa8cdf8aa0858eb2e33 (from https://pypi.org/simple/disptools/) 2021-07-13T08:19:47,975 Found link https://files.pythonhosted.org/packages/c2/c3/b59544ca5f962d3b894e5d4f149180db45c39b86cc0eb55e2dd64beeb175/disptools-0.4.0.tar.gz#sha256=3244787ff59a16143aa24d1aca6193a5c7b972260a534f6ea7af4b9c3d15bd97 (from https://pypi.org/simple/disptools/), version: 0.4.0 2021-07-13T08:19:47,975 Skipping link: not a file: https://pypi.org/simple/disptools/ 2021-07-13T08:19:47,977 Given no hashes to check 1 links for project 'disptools': discarding no candidates 2021-07-13T08:19:47,995 Collecting disptools==0.2.1 2021-07-13T08:19:47,997 Created temporary directory: /tmp/pip-unpack-ix2f3nbx 2021-07-13T08:19:48,176 Downloading disptools-0.2.1.tar.gz (53 kB) 2021-07-13T08:19:48,296 Added disptools==0.2.1 from https://files.pythonhosted.org/packages/67/5e/1b0a5928c857ebc7f9e9638b2923138686634b55eb3a759e7a34d9d092a2/disptools-0.2.1.tar.gz#sha256=ef6eff7de82c103f68480f5385c5555d493f43949b9621fbd5a5eb0f9e7462f3 to build tracker '/tmp/pip-req-tracker-z0_cwnhq' 2021-07-13T08:19:48,297 Running setup.py (path:/tmp/pip-wheel-wlirz05m/disptools_d9bde3cba80e4d14afd00867cfa9f365/setup.py) egg_info for package disptools 2021-07-13T08:19:48,298 Created temporary directory: /tmp/pip-pip-egg-info-d6wehs59 2021-07-13T08:19:48,298 Running command python setup.py egg_info 2021-07-13T08:19:49,875 running egg_info 2021-07-13T08:19:49,877 creating /tmp/pip-pip-egg-info-d6wehs59/disptools.egg-info 2021-07-13T08:19:49,879 writing /tmp/pip-pip-egg-info-d6wehs59/disptools.egg-info/PKG-INFO 2021-07-13T08:19:49,881 writing dependency_links to /tmp/pip-pip-egg-info-d6wehs59/disptools.egg-info/dependency_links.txt 2021-07-13T08:19:49,883 writing requirements to /tmp/pip-pip-egg-info-d6wehs59/disptools.egg-info/requires.txt 2021-07-13T08:19:49,884 writing top-level names to /tmp/pip-pip-egg-info-d6wehs59/disptools.egg-info/top_level.txt 2021-07-13T08:19:49,886 writing manifest file '/tmp/pip-pip-egg-info-d6wehs59/disptools.egg-info/SOURCES.txt' 2021-07-13T08:19:50,028 reading manifest file '/tmp/pip-pip-egg-info-d6wehs59/disptools.egg-info/SOURCES.txt' 2021-07-13T08:19:50,030 reading manifest template 'MANIFEST.in' 2021-07-13T08:19:50,035 writing manifest file '/tmp/pip-pip-egg-info-d6wehs59/disptools.egg-info/SOURCES.txt' 2021-07-13T08:19:50,156 Source in /tmp/pip-wheel-wlirz05m/disptools_d9bde3cba80e4d14afd00867cfa9f365 has version 0.2.1, which satisfies requirement disptools==0.2.1 from https://files.pythonhosted.org/packages/67/5e/1b0a5928c857ebc7f9e9638b2923138686634b55eb3a759e7a34d9d092a2/disptools-0.2.1.tar.gz#sha256=ef6eff7de82c103f68480f5385c5555d493f43949b9621fbd5a5eb0f9e7462f3 2021-07-13T08:19:50,157 Removed disptools==0.2.1 from https://files.pythonhosted.org/packages/67/5e/1b0a5928c857ebc7f9e9638b2923138686634b55eb3a759e7a34d9d092a2/disptools-0.2.1.tar.gz#sha256=ef6eff7de82c103f68480f5385c5555d493f43949b9621fbd5a5eb0f9e7462f3 from build tracker '/tmp/pip-req-tracker-z0_cwnhq' 2021-07-13T08:19:50,162 Created temporary directory: /tmp/pip-unpack-6w9e3dez 2021-07-13T08:19:50,162 Building wheels for collected packages: disptools 2021-07-13T08:19:50,167 Created temporary directory: /tmp/pip-wheel-rtmgykxs 2021-07-13T08:19:50,167 Building wheel for disptools (setup.py): started 2021-07-13T08:19:50,167 Destination directory: /tmp/pip-wheel-rtmgykxs 2021-07-13T08:19:50,168 Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-wlirz05m/disptools_d9bde3cba80e4d14afd00867cfa9f365/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-wlirz05m/disptools_d9bde3cba80e4d14afd00867cfa9f365/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-rtmgykxs 2021-07-13T08:19:51,758 running bdist_wheel 2021-07-13T08:19:51,763 running build 2021-07-13T08:19:51,763 running build_py 2021-07-13T08:19:51,897 creating build 2021-07-13T08:19:51,898 creating build/lib.linux-armv7l-3.9 2021-07-13T08:19:51,899 creating build/lib.linux-armv7l-3.9/disptools 2021-07-13T08:19:51,900 copying disptools/io.py -> build/lib.linux-armv7l-3.9/disptools 2021-07-13T08:19:51,902 copying disptools/__init__.py -> build/lib.linux-armv7l-3.9/disptools 2021-07-13T08:19:51,904 copying disptools/drawing.py -> build/lib.linux-armv7l-3.9/disptools 2021-07-13T08:19:51,906 copying disptools/measure.py -> build/lib.linux-armv7l-3.9/disptools 2021-07-13T08:19:51,908 copying disptools/simulatrophy.py -> build/lib.linux-armv7l-3.9/disptools 2021-07-13T08:19:51,910 copying disptools/predict.py -> build/lib.linux-armv7l-3.9/disptools 2021-07-13T08:19:51,912 copying disptools/displacements.py -> build/lib.linux-armv7l-3.9/disptools 2021-07-13T08:19:51,915 running build_ext 2021-07-13T08:19:51,918 extra_compile_args: ['-Wall', '-std=c99', '-fPIC', '-fopenmp'] 2021-07-13T08:19:51,919 extra_link_args: ['-lm', '-lgomp'] 2021-07-13T08:19:51,919 building '_disptools' extension 2021-07-13T08:19:52,035 Warning: Can't read registry to find the necessary compiler setting 2021-07-13T08:19:52,036 Make sure that Python modules winreg, win32api or win32con are installed. 2021-07-13T08:19:52,253 C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC 2021-07-13T08:19:52,254 creating build/temp.linux-armv7l-3.9 2021-07-13T08:19:52,255 creating build/temp.linux-armv7l-3.9/src 2021-07-13T08:19:52,257 compile options: '-DDISPTOOLS_VERBOSE=1 -DORDER_PD=4 -DFLOAT_SIZE=32 -DDISPTOOLS_DEBUG=0 -Isrc/headers -I/usr/include/python3.9 -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c' 2021-07-13T08:19:52,257 extra options: '-Wall -std=c99 -fPIC -fopenmp' 2021-07-13T08:19:52,347 arm-linux-gnueabihf-gcc: src/_disptools.c 2021-07-13T08:19:52,356 arm-linux-gnueabihf-gcc: src/displacement_field_greedy.carm-linux-gnueabihf-gcc: src/VolumeMatching3D.c 2021-07-13T08:19:52,358 arm-linux-gnueabihf-gcc: src/displacement_field_gradient.c 2021-07-13T08:19:52,570 In file included from src/VolumeMatching3D.c:37: 2021-07-13T08:19:52,570 src/VolumeMatching3D.c: In function ‘volume_matching_3d’: 2021-07-13T08:19:52,571 src/VolumeMatching3D.c:700:20: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 3 has type ‘size_t’ {aka ‘const unsigned int’} [-Wformat=] 2021-07-13T08:19:52,571 700 | "nx: %lu\n" 2021-07-13T08:19:52,572 | ^~~~~~~~~~~~~~~~~~ 2021-07-13T08:19:52,572 ...... 2021-07-13T08:19:52,572 716 | nx, ny, nz, 2021-07-13T08:19:52,572 | ~~ 2021-07-13T08:19:52,572 | | 2021-07-13T08:19:52,572 | size_t {aka const unsigned int} 2021-07-13T08:19:52,572 src/headers/field.h:87:66: note: in definition of macro ‘verbose_printf’ 2021-07-13T08:19:52,573 87 | #define verbose_printf(cond, ...) if (cond) {fprintf(stderr, __VA_ARGS__);} 2021-07-13T08:19:52,573 | ^~~~~~~~~~~ 2021-07-13T08:19:52,573 src/VolumeMatching3D.c:700:34: note: format string is defined here 2021-07-13T08:19:52,573 700 | "nx: %lu\n" 2021-07-13T08:19:52,573 | ~~^ 2021-07-13T08:19:52,574 | | 2021-07-13T08:19:52,574 | long unsigned int 2021-07-13T08:19:52,574 | %u 2021-07-13T08:19:52,574 In file included from src/VolumeMatching3D.c:37: 2021-07-13T08:19:52,574 src/VolumeMatching3D.c:700:20: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 4 has type ‘size_t’ {aka ‘const unsigned int’} [-Wformat=] 2021-07-13T08:19:52,575 700 | "nx: %lu\n" 2021-07-13T08:19:52,575 | ^~~~~~~~~~~~~~~~~~ 2021-07-13T08:19:52,575 ...... 2021-07-13T08:19:52,575 716 | nx, ny, nz, 2021-07-13T08:19:52,576 | ~~ 2021-07-13T08:19:52,576 | | 2021-07-13T08:19:52,576 | size_t {aka const unsigned int} 2021-07-13T08:19:52,576 src/headers/field.h:87:66: note: in definition of macro ‘verbose_printf’ 2021-07-13T08:19:52,576 87 | #define verbose_printf(cond, ...) if (cond) {fprintf(stderr, __VA_ARGS__);} 2021-07-13T08:19:52,577 | ^~~~~~~~~~~ 2021-07-13T08:19:52,578 src/VolumeMatching3D.c:700:20: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 5 has type ‘size_t’ {aka ‘const unsigned int’} [-Wformat=] 2021-07-13T08:19:52,578 700 | "nx: %lu\n" 2021-07-13T08:19:52,579 | ^~~~~~~~~~~~~~~~~~ 2021-07-13T08:19:52,579 ...... 2021-07-13T08:19:52,579 716 | nx, ny, nz, 2021-07-13T08:19:52,579 | ~~ 2021-07-13T08:19:52,580 | | 2021-07-13T08:19:52,580 | size_t {aka const unsigned int} 2021-07-13T08:19:52,580 src/headers/field.h:87:66: note: in definition of macro ‘verbose_printf’ 2021-07-13T08:19:52,580 87 | #define verbose_printf(cond, ...) if (cond) {fprintf(stderr, __VA_ARGS__);} 2021-07-13T08:19:52,580 | ^~~~~~~~~~~ 2021-07-13T08:19:52,580 src/VolumeMatching3D.c:700:20: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 18 has type ‘size_t’ {aka ‘const unsigned int’} [-Wformat=] 2021-07-13T08:19:52,580 700 | "nx: %lu\n" 2021-07-13T08:19:52,581 | ^~~~~~~~~~~~~~~~~~ 2021-07-13T08:19:52,581 ...... 2021-07-13T08:19:52,581 722 | it_max); 2021-07-13T08:19:52,581 | ~~~~~~ 2021-07-13T08:19:52,581 | | 2021-07-13T08:19:52,582 | size_t {aka const unsigned int} 2021-07-13T08:19:52,582 src/headers/field.h:87:66: note: in definition of macro ‘verbose_printf’ 2021-07-13T08:19:52,582 87 | #define verbose_printf(cond, ...) if (cond) {fprintf(stderr, __VA_ARGS__);} 2021-07-13T08:19:52,582 | ^~~~~~~~~~~ 2021-07-13T08:19:52,798 In file included from src/displacement_field_gradient.c:8: 2021-07-13T08:19:52,798 src/displacement_field_gradient.c: In function ‘generate_displacement_gradient’: 2021-07-13T08:19:52,799 src/displacement_field_gradient.c:183:20: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 3 has type ‘size_t’ {aka ‘const unsigned int’} [-Wformat=] 2021-07-13T08:19:52,800 183 | "nx: %lu\n" 2021-07-13T08:19:52,800 | ^~~~~~~~~~~~~~~~~~ 2021-07-13T08:19:52,800 ...... 2021-07-13T08:19:52,801 199 | nx, ny, nz, 2021-07-13T08:19:52,801 | ~~ 2021-07-13T08:19:52,801 | | 2021-07-13T08:19:52,801 | size_t {aka const unsigned int} 2021-07-13T08:19:52,801 src/headers/field.h:87:66: note: in definition of macro ‘verbose_printf’ 2021-07-13T08:19:52,802 87 | #define verbose_printf(cond, ...) if (cond) {fprintf(stderr, __VA_ARGS__);} 2021-07-13T08:19:52,802 | ^~~~~~~~~~~ 2021-07-13T08:19:52,802 In file included from src/displacement_field_greedy.c:8: 2021-07-13T08:19:52,802 src/displacement_field_greedy.c: In function ‘generate_displacement_greedy’: 2021-07-13T08:19:52,803 src/displacement_field_greedy.c:109:20: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 3 has type ‘size_t’ {aka ‘const unsigned int’} [-Wformat=] 2021-07-13T08:19:52,803 109 | "nx: %lu\n" 2021-07-13T08:19:52,803 | ^~~~~~~~~~~~~~~~~~ 2021-07-13T08:19:52,804 ...... 2021-07-13T08:19:52,804 125 | nx, ny, nz, 2021-07-13T08:19:52,804 | ~~ 2021-07-13T08:19:52,804 | | 2021-07-13T08:19:52,805 | size_t {aka const unsigned int} 2021-07-13T08:19:52,805 src/headers/field.h:87:66: note: in definition of macro ‘verbose_printf’ 2021-07-13T08:19:52,806 87 | #define verbose_printf(cond, ...) if (cond) {fprintf(stderr, __VA_ARGS__);} 2021-07-13T08:19:52,807 | ^~~~~~~~~~~ 2021-07-13T08:19:52,807 src/displacement_field_greedy.c:109:34: note: format string is defined here 2021-07-13T08:19:52,807 109 | "nx: %lu\n" 2021-07-13T08:19:52,808 | ~~^ 2021-07-13T08:19:52,808 | | 2021-07-13T08:19:52,808 | long unsigned int 2021-07-13T08:19:52,808 | %u 2021-07-13T08:19:52,808 In file included from src/displacement_field_greedy.c:8: 2021-07-13T08:19:52,809 src/displacement_field_greedy.c:109:20: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 4 has type ‘size_t’ {aka ‘const unsigned int’} [-Wformat=] 2021-07-13T08:19:52,809 109 | "nx: %lu\n" 2021-07-13T08:19:52,809 | ^~~~~~~~~~~~~~~~~~ 2021-07-13T08:19:52,809 ...... 2021-07-13T08:19:52,809 125 | nx, ny, nz, 2021-07-13T08:19:52,810 | ~~ 2021-07-13T08:19:52,810 | | 2021-07-13T08:19:52,810 | size_t {aka const unsigned int} 2021-07-13T08:19:52,811 src/headers/field.h:87:66: note: in definition of macro ‘verbose_printf’ 2021-07-13T08:19:52,811 87 | #define verbose_printf(cond, ...) if (cond) {fprintf(stderr, __VA_ARGS__);} 2021-07-13T08:19:52,811 | ^~~~~~~~~~~ 2021-07-13T08:19:52,811 src/displacement_field_greedy.c:109:20: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 5 has type ‘size_t’ {aka ‘const unsigned int’} [-Wformat=] 2021-07-13T08:19:52,811 109 | "nx: %lu\n" 2021-07-13T08:19:52,812 | ^~~~~~~~~~~~~~~~~~ 2021-07-13T08:19:52,812 ...... 2021-07-13T08:19:52,812 125 | nx, ny, nz, 2021-07-13T08:19:52,812 | ~~ 2021-07-13T08:19:52,813 | | 2021-07-13T08:19:52,813 | size_t {aka const unsigned int} 2021-07-13T08:19:52,813 src/headers/field.h:87:66: note: in definition of macro ‘verbose_printf’ 2021-07-13T08:19:52,813 87 | #define verbose_printf(cond, ...) if (cond) {fprintf(stderr, __VA_ARGS__);} 2021-07-13T08:19:52,813 | ^~~~~~~~~~~ 2021-07-13T08:19:52,814 src/displacement_field_greedy.c:109:20: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 18 has type ‘size_t’ {aka ‘const unsigned int’} [-Wformat=] 2021-07-13T08:19:52,814 109 | "nx: %lu\n" 2021-07-13T08:19:52,814 | ^~~~~~~~~~~~~~~~~~ 2021-07-13T08:19:52,814 ...... 2021-07-13T08:19:52,814 131 | it_max); 2021-07-13T08:19:52,815 | ~~~~~~ 2021-07-13T08:19:52,835 | | 2021-07-13T08:19:52,835 | size_t {aka const unsigned int} 2021-07-13T08:19:52,836 src/headers/field.h:87:66: note: in definition of macro ‘verbose_printf’ 2021-07-13T08:19:52,836 87 | #define verbose_printf(cond, ...) if (cond) {fprintf(stderr, __VA_ARGS__);} 2021-07-13T08:19:52,836 | ^~~~~~~~~~~ 2021-07-13T08:19:52,836 src/displacement_field_greedy.c:211:24: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 3 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 2021-07-13T08:19:52,836 211 | "Iteration %5ld: " 2021-07-13T08:19:52,837 | ^~~~~~~~~~~~~~~~~~~ 2021-07-13T08:19:52,837 ...... 2021-07-13T08:19:52,837 214 | it, error, max_voxel_error); 2021-07-13T08:19:52,837 | ~~ 2021-07-13T08:19:52,837 | | 2021-07-13T08:19:52,837 | size_t {aka unsigned int} 2021-07-13T08:19:52,838 src/headers/field.h:87:66: note: in definition of macro ‘verbose_printf’ 2021-07-13T08:19:52,838 87 | #define verbose_printf(cond, ...) if (cond) {fprintf(stderr, __VA_ARGS__);} 2021-07-13T08:19:52,838 | ^~~~~~~~~~~ 2021-07-13T08:19:52,838 src/displacement_field_greedy.c:211:38: note: format string is defined here 2021-07-13T08:19:52,838 211 | "Iteration %5ld: " 2021-07-13T08:19:52,838 | ~~~^ 2021-07-13T08:19:52,838 | | 2021-07-13T08:19:52,839 | long int 2021-07-13T08:19:52,839 | %5d 2021-07-13T08:19:52,839 src/displacement_field_gradient.c:183:34: note: format string is defined here 2021-07-13T08:19:52,839 183 | "nx: %lu\n" 2021-07-13T08:19:52,839 | ~~^ 2021-07-13T08:19:52,839 | | 2021-07-13T08:19:52,840 | long unsigned int 2021-07-13T08:19:52,840 | %u 2021-07-13T08:19:52,840 In file included from src/displacement_field_gradient.c:8: 2021-07-13T08:19:52,840 src/displacement_field_gradient.c:183:20: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 4 has type ‘size_t’ {aka ‘const unsigned int’} [-Wformat=] 2021-07-13T08:19:52,840 183 | "nx: %lu\n" 2021-07-13T08:19:52,840 | ^~~~~~~~~~~~~~~~~~ 2021-07-13T08:19:52,841 ...... 2021-07-13T08:19:52,841 199 | nx, ny, nz, 2021-07-13T08:19:52,841 | ~~ 2021-07-13T08:19:52,841 | | 2021-07-13T08:19:52,841 | size_t {aka const unsigned int} 2021-07-13T08:19:52,841 src/headers/field.h:87:66: note: in definition of macro ‘verbose_printf’ 2021-07-13T08:19:52,842 87 | #define verbose_printf(cond, ...) if (cond) {fprintf(stderr, __VA_ARGS__);} 2021-07-13T08:19:52,842 | ^~~~~~~~~~~ 2021-07-13T08:19:52,842 src/displacement_field_gradient.c:183:20: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 5 has type ‘size_t’ {aka ‘const unsigned int’} [-Wformat=] 2021-07-13T08:19:52,842 183 | "nx: %lu\n" 2021-07-13T08:19:52,842 | ^~~~~~~~~~~~~~~~~~ 2021-07-13T08:19:52,843 ...... 2021-07-13T08:19:52,843 199 | nx, ny, nz, 2021-07-13T08:19:52,843 | ~~ 2021-07-13T08:19:52,843 | | 2021-07-13T08:19:52,843 | size_t {aka const unsigned int} 2021-07-13T08:19:52,844 src/headers/field.h:87:66: note: in definition of macro ‘verbose_printf’ 2021-07-13T08:19:52,844 87 | #define verbose_printf(cond, ...) if (cond) {fprintf(stderr, __VA_ARGS__);} 2021-07-13T08:19:52,844 | ^~~~~~~~~~~ 2021-07-13T08:19:52,844 src/displacement_field_gradient.c:183:20: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 18 has type ‘size_t’ {aka ‘const unsigned int’} [-Wformat=] 2021-07-13T08:19:52,844 183 | "nx: %lu\n" 2021-07-13T08:19:52,844 | ^~~~~~~~~~~~~~~~~~ 2021-07-13T08:19:52,845 ...... 2021-07-13T08:19:52,855 205 | it_max); 2021-07-13T08:19:52,855 | ~~~~~~ 2021-07-13T08:19:52,856 | | 2021-07-13T08:19:52,856 | size_t {aka const unsigned int} 2021-07-13T08:19:52,856 src/headers/field.h:87:66: note: in definition of macro ‘verbose_printf’ 2021-07-13T08:19:52,857 87 | #define verbose_printf(cond, ...) if (cond) {fprintf(stderr, __VA_ARGS__);} 2021-07-13T08:19:52,857 | ^~~~~~~~~~~ 2021-07-13T08:19:52,857 src/displacement_field_gradient.c:362:24: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 3 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 2021-07-13T08:19:52,858 362 | "Iteration %5ld: " 2021-07-13T08:19:52,858 | ^~~~~~~~~~~~~~~~~~~ 2021-07-13T08:19:52,858 ...... 2021-07-13T08:19:52,858 365 | it, error, max_voxel_error); 2021-07-13T08:19:52,858 | ~~ 2021-07-13T08:19:52,859 | | 2021-07-13T08:19:52,859 | size_t {aka unsigned int} 2021-07-13T08:19:52,859 src/headers/field.h:87:66: note: in definition of macro ‘verbose_printf’ 2021-07-13T08:19:52,859 87 | #define verbose_printf(cond, ...) if (cond) {fprintf(stderr, __VA_ARGS__);} 2021-07-13T08:19:52,859 | ^~~~~~~~~~~ 2021-07-13T08:19:52,859 src/displacement_field_gradient.c:362:38: note: format string is defined here 2021-07-13T08:19:52,860 362 | "Iteration %5ld: " 2021-07-13T08:19:52,860 | ~~~^ 2021-07-13T08:19:52,860 | | 2021-07-13T08:19:52,860 | long int 2021-07-13T08:19:52,860 | %5d 2021-07-13T08:19:53,156 In file included from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarrayobject.h:21, 2021-07-13T08:19:53,156 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/arrayobject.h:4, 2021-07-13T08:19:53,157 from src/_disptools.c:11: 2021-07-13T08:19:53,158 /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/__multiarray_api.h:1464:1: warning: ‘_import_array’ defined but not used [-Wunused-function] 2021-07-13T08:19:53,158 1464 | _import_array(void) 2021-07-13T08:19:53,159 | ^~~~~~~~~~~~~ 2021-07-13T08:19:53,378 src/_disptools.c: In function ‘method_shape_descriptor’: 2021-07-13T08:19:53,379 src/_disptools.c:172:12: warning: ‘result’ may be used uninitialized in this function [-Wmaybe-uninitialized] 2021-07-13T08:19:53,379 172 | return Py_BuildValue(PY_FMT_FLOATING, result); 2021-07-13T08:19:53,380 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-13T08:19:53,503 arm-linux-gnueabihf-gcc: src/field.c 2021-07-13T08:19:53,637 src/field.c: In function ‘print_image_info’: 2021-07-13T08:19:53,638 src/field.c:58:19: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 2 has type ‘size_t’ {aka ‘const unsigned int’} [-Wformat=] 2021-07-13T08:19:53,638 58 | printf("nd: %ld\n" 2021-07-13T08:19:53,639 | ~~^ 2021-07-13T08:19:53,640 | | 2021-07-13T08:19:53,641 | long int 2021-07-13T08:19:53,641 | %d 2021-07-13T08:19:53,641 ...... 2021-07-13T08:19:53,642 65 | img.nd, 2021-07-13T08:19:53,642 | ~~~~~~ 2021-07-13T08:19:53,642 | | 2021-07-13T08:19:53,642 | size_t {aka const unsigned int} 2021-07-13T08:19:53,642 src/field.c:58:12: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 3 has type ‘size_t’ {aka ‘const unsigned int’} [-Wformat=] 2021-07-13T08:19:53,642 58 | printf("nd: %ld\n" 2021-07-13T08:19:53,643 | ^~~~~~~~~~~ 2021-07-13T08:19:53,643 ...... 2021-07-13T08:19:53,643 66 | img.nx, img.ny, img.nz, 2021-07-13T08:19:53,643 | ~~~~~~ 2021-07-13T08:19:53,643 | | 2021-07-13T08:19:53,644 | size_t {aka const unsigned int} 2021-07-13T08:19:53,644 src/field.c:59:19: note: format string is defined here 2021-07-13T08:19:53,644 59 | "nx: %ld\n" 2021-07-13T08:19:53,644 | ~~^ 2021-07-13T08:19:53,644 | | 2021-07-13T08:19:53,644 | long int 2021-07-13T08:19:53,645 | %d 2021-07-13T08:19:53,645 src/field.c:58:12: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 4 has type ‘size_t’ {aka ‘const unsigned int’} [-Wformat=] 2021-07-13T08:19:53,645 58 | printf("nd: %ld\n" 2021-07-13T08:19:53,645 | ^~~~~~~~~~~ 2021-07-13T08:19:53,645 ...... 2021-07-13T08:19:53,646 66 | img.nx, img.ny, img.nz, 2021-07-13T08:19:53,646 | ~~~~~~ 2021-07-13T08:19:53,646 | | 2021-07-13T08:19:53,647 | size_t {aka const unsigned int} 2021-07-13T08:19:53,647 src/field.c:60:19: note: format string is defined here 2021-07-13T08:19:53,647 60 | "ny: %ld\n" 2021-07-13T08:19:53,647 | ~~^ 2021-07-13T08:19:53,647 | | 2021-07-13T08:19:53,648 | long int 2021-07-13T08:19:53,648 | %d 2021-07-13T08:19:53,648 src/field.c:58:12: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 5 has type ‘size_t’ {aka ‘const unsigned int’} [-Wformat=] 2021-07-13T08:19:53,648 58 | printf("nd: %ld\n" 2021-07-13T08:19:53,648 | ^~~~~~~~~~~ 2021-07-13T08:19:53,648 ...... 2021-07-13T08:19:53,649 66 | img.nx, img.ny, img.nz, 2021-07-13T08:19:53,649 | ~~~~~~ 2021-07-13T08:19:53,649 | | 2021-07-13T08:19:53,649 | size_t {aka const unsigned int} 2021-07-13T08:19:53,649 src/field.c:61:19: note: format string is defined here 2021-07-13T08:19:53,650 61 | "nz: %ld\n" 2021-07-13T08:19:53,650 | ~~^ 2021-07-13T08:19:53,650 | | 2021-07-13T08:19:53,650 | long int 2021-07-13T08:19:53,650 | %d 2021-07-13T08:19:53,827 arm-linux-gnueabihf-gcc: src/jacobian.c 2021-07-13T08:19:55,580 arm-linux-gnueabihf-gcc: src/shape_descriptors.c 2021-07-13T08:20:00,591 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/src/VolumeMatching3D.o build/temp.linux-armv7l-3.9/src/_disptools.o build/temp.linux-armv7l-3.9/src/displacement_field_gradient.o build/temp.linux-armv7l-3.9/src/displacement_field_greedy.o build/temp.linux-armv7l-3.9/src/field.o build/temp.linux-armv7l-3.9/src/jacobian.o build/temp.linux-armv7l-3.9/src/shape_descriptors.o -o build/lib.linux-armv7l-3.9/_disptools.cpython-39-arm-linux-gnueabihf.so -lm -lgomp 2021-07-13T08:20:00,798 installing to build/bdist.linux-armv7l/wheel 2021-07-13T08:20:00,798 running install 2021-07-13T08:20:00,800 running install_lib 2021-07-13T08:20:00,804 creating build/bdist.linux-armv7l 2021-07-13T08:20:00,805 creating build/bdist.linux-armv7l/wheel 2021-07-13T08:20:00,807 creating build/bdist.linux-armv7l/wheel/disptools 2021-07-13T08:20:00,808 copying build/lib.linux-armv7l-3.9/disptools/io.py -> build/bdist.linux-armv7l/wheel/disptools 2021-07-13T08:20:00,811 copying build/lib.linux-armv7l-3.9/disptools/__init__.py -> build/bdist.linux-armv7l/wheel/disptools 2021-07-13T08:20:00,813 copying build/lib.linux-armv7l-3.9/disptools/drawing.py -> build/bdist.linux-armv7l/wheel/disptools 2021-07-13T08:20:00,816 copying build/lib.linux-armv7l-3.9/disptools/measure.py -> build/bdist.linux-armv7l/wheel/disptools 2021-07-13T08:20:00,819 copying build/lib.linux-armv7l-3.9/disptools/simulatrophy.py -> build/bdist.linux-armv7l/wheel/disptools 2021-07-13T08:20:00,821 copying build/lib.linux-armv7l-3.9/disptools/predict.py -> build/bdist.linux-armv7l/wheel/disptools 2021-07-13T08:20:00,823 copying build/lib.linux-armv7l-3.9/disptools/displacements.py -> build/bdist.linux-armv7l/wheel/disptools 2021-07-13T08:20:00,827 copying build/lib.linux-armv7l-3.9/_disptools.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel 2021-07-13T08:20:00,838 running install_egg_info 2021-07-13T08:20:00,844 running egg_info 2021-07-13T08:20:00,846 writing disptools.egg-info/PKG-INFO 2021-07-13T08:20:00,849 writing dependency_links to disptools.egg-info/dependency_links.txt 2021-07-13T08:20:00,851 writing requirements to disptools.egg-info/requires.txt 2021-07-13T08:20:00,852 writing top-level names to disptools.egg-info/top_level.txt 2021-07-13T08:20:00,863 reading manifest file 'disptools.egg-info/SOURCES.txt' 2021-07-13T08:20:00,867 reading manifest template 'MANIFEST.in' 2021-07-13T08:20:00,872 writing manifest file 'disptools.egg-info/SOURCES.txt' 2021-07-13T08:20:00,874 Copying disptools.egg-info to build/bdist.linux-armv7l/wheel/disptools-0.2.1-py3.9.egg-info 2021-07-13T08:20:00,886 running install_scripts 2021-07-13T08:20:00,911 creating build/bdist.linux-armv7l/wheel/disptools-0.2.1.dist-info/WHEEL 2021-07-13T08:20:00,913 creating '/tmp/pip-wheel-rtmgykxs/disptools-0.2.1-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2021-07-13T08:20:00,979 adding '_disptools.cpython-39-arm-linux-gnueabihf.so' 2021-07-13T08:20:00,983 adding 'disptools/__init__.py' 2021-07-13T08:20:00,986 adding 'disptools/displacements.py' 2021-07-13T08:20:00,989 adding 'disptools/drawing.py' 2021-07-13T08:20:00,991 adding 'disptools/io.py' 2021-07-13T08:20:00,992 adding 'disptools/measure.py' 2021-07-13T08:20:00,994 adding 'disptools/predict.py' 2021-07-13T08:20:00,995 adding 'disptools/simulatrophy.py' 2021-07-13T08:20:00,997 adding 'disptools-0.2.1.dist-info/METADATA' 2021-07-13T08:20:00,998 adding 'disptools-0.2.1.dist-info/WHEEL' 2021-07-13T08:20:00,999 adding 'disptools-0.2.1.dist-info/top_level.txt' 2021-07-13T08:20:01,000 adding 'disptools-0.2.1.dist-info/RECORD' 2021-07-13T08:20:01,005 removing build/bdist.linux-armv7l/wheel 2021-07-13T08:20:01,164 Building wheel for disptools (setup.py): finished with status 'done' 2021-07-13T08:20:01,168 Created wheel for disptools: filename=disptools-0.2.1-cp39-cp39-linux_armv7l.whl size=158867 sha256=2a82355d313d49e6d848d7cb6d8eca60e88223c3a8be094e92e78501fa1b49ba 2021-07-13T08:20:01,169 Stored in directory: /tmp/pip-ephem-wheel-cache-mf67bv0r/wheels/a8/32/70/13c485e0203c7ba53a7885f8d9d29732a75e5efc2a6bc381b5 2021-07-13T08:20:01,178 Successfully built disptools 2021-07-13T08:20:01,187 Removed build tracker: '/tmp/pip-req-tracker-z0_cwnhq'