2021-07-13T10:01:32,342 Created temporary directory: /tmp/pip-ephem-wheel-cache-403evbcc
2021-07-13T10:01:32,345 Created temporary directory: /tmp/pip-req-tracker-15ntmlcw
2021-07-13T10:01:32,345 Initialized build tracking at /tmp/pip-req-tracker-15ntmlcw
2021-07-13T10:01:32,346 Created build tracker: /tmp/pip-req-tracker-15ntmlcw
2021-07-13T10:01:32,346 Entered build tracker: /tmp/pip-req-tracker-15ntmlcw
2021-07-13T10:01:32,346 Created temporary directory: /tmp/pip-wheel-udw32uwi
2021-07-13T10:01:32,376 1 location(s) to search for versions of hatshufflepy:
2021-07-13T10:01:32,376 * https://pypi.org/simple/hatshufflepy/
2021-07-13T10:01:32,377 Fetching project page and analyzing links: https://pypi.org/simple/hatshufflepy/
2021-07-13T10:01:32,377 Getting page https://pypi.org/simple/hatshufflepy/
2021-07-13T10:01:32,378 Found index url https://pypi.org/simple
2021-07-13T10:01:32,469   Found link https://files.pythonhosted.org/packages/2f/55/14d78ef177d725c0ddec3583bd5b9383440e399fa94e00aab8e519a0f850/hatshufflepy-0.0.1.tar.gz#sha256=7be56854f4688082d308d8b589b963fff3ae097cf4b68f55ab6a445657d13411 (from https://pypi.org/simple/hatshufflepy/), version: 0.0.1
2021-07-13T10:01:32,470   Found link https://files.pythonhosted.org/packages/65/e3/88ea19e93c06bd31230b273b46bad89c3fd39f5a25edc5485a2e8bc47802/hatshufflepy-0.0.2.tar.gz#sha256=78fa24bac311a90a976e20516e1f9dd12240ad88074424484ecce3f745d3c1e8 (from https://pypi.org/simple/hatshufflepy/), version: 0.0.2
2021-07-13T10:01:32,470   Found link https://files.pythonhosted.org/packages/27/6f/232dfb1720bec6a4327b3ea607eb148fb7e9c056d76c550993415d21c87a/hatshufflepy-0.0.3.tar.gz#sha256=95deececa6434dff101a9256593463a8271318fa3d91abe99e89da100727306e (from https://pypi.org/simple/hatshufflepy/), version: 0.0.3
2021-07-13T10:01:32,470   Found link https://files.pythonhosted.org/packages/31/bc/f2a7c97edee256489b4f10461688486d5f811a94a2ab1b6489f3ae7b624b/hatshufflepy-0.0.4.tar.gz#sha256=159b9981928de8ea98e17cfd28ff0c3dd803f90748706a4bea4eb57d903e2d45 (from https://pypi.org/simple/hatshufflepy/), version: 0.0.4
2021-07-13T10:01:32,470   Found link https://files.pythonhosted.org/packages/a9/0b/42071a0bef328b560c14eb80ce532ecd63a4178f6f3bec4b5c04eae9af8e/hatshufflepy-0.0.5.tar.gz#sha256=2eb0e2d9b5740248782839466b6539d7d817af1fe412f390f538ca88ee7dd16e (from https://pypi.org/simple/hatshufflepy/), version: 0.0.5
2021-07-13T10:01:32,471   Found link https://files.pythonhosted.org/packages/c3/5b/2bc2424b1b81c13141bacaff629c9be11a9442d165feb7b91312b16f991e/hatshufflepy-0.0.6.tar.gz#sha256=7470de6ada404f62440131a088ca7d94816ebd300be0fe27136e8b83013e2f28 (from https://pypi.org/simple/hatshufflepy/), version: 0.0.6
2021-07-13T10:01:32,471 Skipping link: not a file: https://pypi.org/simple/hatshufflepy/
2021-07-13T10:01:32,489 Given no hashes to check 1 links for project 'hatshufflepy': discarding no candidates
2021-07-13T10:01:32,508 Collecting hatshufflepy==0.0.2
2021-07-13T10:01:32,510   Created temporary directory: /tmp/pip-unpack-t96if649
2021-07-13T10:01:33,675   Downloading hatshufflepy-0.0.2.tar.gz (4.7 MB)
2021-07-13T10:01:35,090   Added hatshufflepy==0.0.2 from https://files.pythonhosted.org/packages/65/e3/88ea19e93c06bd31230b273b46bad89c3fd39f5a25edc5485a2e8bc47802/hatshufflepy-0.0.2.tar.gz#sha256=78fa24bac311a90a976e20516e1f9dd12240ad88074424484ecce3f745d3c1e8 to build tracker '/tmp/pip-req-tracker-15ntmlcw'
2021-07-13T10:01:35,091     Running setup.py (path:/tmp/pip-wheel-udw32uwi/hatshufflepy_edcd23c5731740f28ad91a7f362e4028/setup.py) egg_info for package hatshufflepy
2021-07-13T10:01:35,092     Created temporary directory: /tmp/pip-pip-egg-info-xqj9rxqc
2021-07-13T10:01:35,092     Running command python setup.py egg_info
2021-07-13T10:01:36,848     /usr/local/lib/python3.9/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-udw32uwi/hatshufflepy_edcd23c5731740f28ad91a7f362e4028/hatshufflepy/hatshufflepy.pxd
2021-07-13T10:01:36,849       tree = Parsing.p_module(s, pxd, full_module_name)
2021-07-13T10:01:37,277     Compiling hatshufflepy/hatshufflepy.pyx because it depends on /usr/local/lib/python3.9/dist-packages/Cython/Includes/libcpp/string.pxd.
2021-07-13T10:01:37,277     [1/1] Cythonizing hatshufflepy/hatshufflepy.pyx
2021-07-13T10:01:37,326     /usr/local/lib/python3.9/dist-packages/setuptools/dist.py:697: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
2021-07-13T10:01:37,326       warnings.warn(
2021-07-13T10:01:37,461     running egg_info
2021-07-13T10:01:37,463     creating /tmp/pip-pip-egg-info-xqj9rxqc/hatshufflepy.egg-info
2021-07-13T10:01:37,465     writing /tmp/pip-pip-egg-info-xqj9rxqc/hatshufflepy.egg-info/PKG-INFO
2021-07-13T10:01:37,467     writing dependency_links to /tmp/pip-pip-egg-info-xqj9rxqc/hatshufflepy.egg-info/dependency_links.txt
2021-07-13T10:01:37,469     writing requirements to /tmp/pip-pip-egg-info-xqj9rxqc/hatshufflepy.egg-info/requires.txt
2021-07-13T10:01:37,470     writing top-level names to /tmp/pip-pip-egg-info-xqj9rxqc/hatshufflepy.egg-info/top_level.txt
2021-07-13T10:01:37,471     writing manifest file '/tmp/pip-pip-egg-info-xqj9rxqc/hatshufflepy.egg-info/SOURCES.txt'
2021-07-13T10:01:37,508     reading manifest file '/tmp/pip-pip-egg-info-xqj9rxqc/hatshufflepy.egg-info/SOURCES.txt'
2021-07-13T10:01:37,511     reading manifest template 'MANIFEST.in'
2021-07-13T10:01:37,585     writing manifest file '/tmp/pip-pip-egg-info-xqj9rxqc/hatshufflepy.egg-info/SOURCES.txt'
2021-07-13T10:01:37,720   Source in /tmp/pip-wheel-udw32uwi/hatshufflepy_edcd23c5731740f28ad91a7f362e4028 has version 0.0.2, which satisfies requirement hatshufflepy==0.0.2 from https://files.pythonhosted.org/packages/65/e3/88ea19e93c06bd31230b273b46bad89c3fd39f5a25edc5485a2e8bc47802/hatshufflepy-0.0.2.tar.gz#sha256=78fa24bac311a90a976e20516e1f9dd12240ad88074424484ecce3f745d3c1e8
2021-07-13T10:01:37,721   Removed hatshufflepy==0.0.2 from https://files.pythonhosted.org/packages/65/e3/88ea19e93c06bd31230b273b46bad89c3fd39f5a25edc5485a2e8bc47802/hatshufflepy-0.0.2.tar.gz#sha256=78fa24bac311a90a976e20516e1f9dd12240ad88074424484ecce3f745d3c1e8 from build tracker '/tmp/pip-req-tracker-15ntmlcw'
2021-07-13T10:01:37,725 Created temporary directory: /tmp/pip-unpack-5sv16krc
2021-07-13T10:01:37,725 Building wheels for collected packages: hatshufflepy
2021-07-13T10:01:37,730   Created temporary directory: /tmp/pip-wheel-8yx4syo2
2021-07-13T10:01:37,730   Building wheel for hatshufflepy (setup.py): started
2021-07-13T10:01:37,731   Destination directory: /tmp/pip-wheel-8yx4syo2
2021-07-13T10:01:37,731   Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-udw32uwi/hatshufflepy_edcd23c5731740f28ad91a7f362e4028/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-udw32uwi/hatshufflepy_edcd23c5731740f28ad91a7f362e4028/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-8yx4syo2
2021-07-13T10:01:39,387   /usr/local/lib/python3.9/dist-packages/setuptools/dist.py:697: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
2021-07-13T10:01:39,388     warnings.warn(
2021-07-13T10:01:39,535   running bdist_wheel
2021-07-13T10:01:39,540   running build
2021-07-13T10:01:39,540   running build_ext
2021-07-13T10:01:39,545   building 'hatshufflepy' extension
2021-07-13T10:01:39,545   creating build
2021-07-13T10:01:39,546   creating build/temp.linux-armv7l-3.9
2021-07-13T10:01:39,546   creating build/temp.linux-armv7l-3.9/hatshufflepy
2021-07-13T10:01:39,547   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Ihatshufflepy/libhatshuffle/include/libhatshuffle -Ihatshufflepy/libhatshuffle/include -Ilibhatshuffle/include/libff -I/usr/include/python3.9 -c hatshufflepy/hatshufflepy.cpp -o build/temp.linux-armv7l-3.9/hatshufflepy/hatshufflepy.o -std=c++11 -fPIC -shared -w -static -O3
2021-07-13T10:01:49,192   creating build/lib.linux-armv7l-3.9
2021-07-13T10:01:49,192   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/hatshufflepy/hatshufflepy.o -L/usr/local/lib -Lhatshufflepy/libhatshuffle/lib -Wl,--enable-new-dtags,-R/tmp/pip-wheel-udw32uwi/hatshufflepy_edcd23c5731740f28ad91a7f362e4028/hatshufflepy/libhatshuffle/lib -lzm -lff -lhatshuffle -o build/lib.linux-armv7l-3.9/hatshufflepy.cpython-39-arm-linux-gnueabihf.so -lgmp -fopenmp -g
2021-07-13T10:01:49,244   hatshufflepy/libhatshuffle/lib/libzm.so: file not recognized: file format not recognized
2021-07-13T10:01:49,246   collect2: error: ld returned 1 exit status
2021-07-13T10:01:49,249   error: command '/usr/bin/arm-linux-gnueabihf-g++' failed with exit code 1
2021-07-13T10:01:49,360   Building wheel for hatshufflepy (setup.py): finished with status 'error'
2021-07-13T10:01:49,360   ERROR: Failed building wheel for hatshufflepy
2021-07-13T10:01:49,361   Running setup.py clean for hatshufflepy
2021-07-13T10:01:49,361   Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-udw32uwi/hatshufflepy_edcd23c5731740f28ad91a7f362e4028/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-udw32uwi/hatshufflepy_edcd23c5731740f28ad91a7f362e4028/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' clean --all
2021-07-13T10:01:51,041   /usr/local/lib/python3.9/dist-packages/setuptools/dist.py:697: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
2021-07-13T10:01:51,042     warnings.warn(
2021-07-13T10:01:51,170   running clean
2021-07-13T10:01:51,174   removing 'build/temp.linux-armv7l-3.9' (and everything under it)
2021-07-13T10:01:51,176   removing 'build/lib.linux-armv7l-3.9' (and everything under it)
2021-07-13T10:01:51,177   'build/bdist.linux-armv7l' does not exist -- can't clean it
2021-07-13T10:01:51,177   'build/scripts-3.9' does not exist -- can't clean it
2021-07-13T10:01:51,178   removing 'build'
2021-07-13T10:01:51,274 Failed to build hatshufflepy
2021-07-13T10:01:51,275 ERROR: Failed to build one or more wheels
2021-07-13T10:01:51,275 Exception information:
2021-07-13T10:01:51,275 Traceback (most recent call last):
2021-07-13T10:01:51,275   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/cli/base_command.py", line 180, in _main
2021-07-13T10:01:51,275     status = self.run(options, args)
2021-07-13T10:01:51,275   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/cli/req_command.py", line 205, in wrapper
2021-07-13T10:01:51,275     return func(self, options, args)
2021-07-13T10:01:51,275   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/commands/wheel.py", line 174, in run
2021-07-13T10:01:51,275     raise CommandError(
2021-07-13T10:01:51,275 pip._internal.exceptions.CommandError: Failed to build one or more wheels
2021-07-13T10:01:51,278 Removed build tracker: '/tmp/pip-req-tracker-15ntmlcw'