2021-07-13T10:15:33,887 Created temporary directory: /tmp/pip-ephem-wheel-cache-lc0pl9lx
2021-07-13T10:15:33,890 Created temporary directory: /tmp/pip-req-tracker-m7j2q34_
2021-07-13T10:15:33,890 Initialized build tracking at /tmp/pip-req-tracker-m7j2q34_
2021-07-13T10:15:33,891 Created build tracker: /tmp/pip-req-tracker-m7j2q34_
2021-07-13T10:15:33,891 Entered build tracker: /tmp/pip-req-tracker-m7j2q34_
2021-07-13T10:15:33,891 Created temporary directory: /tmp/pip-wheel-kj2wi5gp
2021-07-13T10:15:33,921 1 location(s) to search for versions of rnatools:
2021-07-13T10:15:33,921 * https://pypi.org/simple/rnatools/
2021-07-13T10:15:33,922 Fetching project page and analyzing links: https://pypi.org/simple/rnatools/
2021-07-13T10:15:33,922 Getting page https://pypi.org/simple/rnatools/
2021-07-13T10:15:33,924 Found index url https://pypi.org/simple
2021-07-13T10:15:34,011   Found link https://files.pythonhosted.org/packages/1e/ab/9d2e7f5b59b995b07b28c62d3aa903efd10e1e5bd597be89605afa6dc748/RNAtools-0.8.3.tar.gz#sha256=676986a638d03f8520e4787003dffefe345ba2f0c09e8324f7066daadb4754c6 (from https://pypi.org/simple/rnatools/), version: 0.8.3
2021-07-13T10:15:34,012   Found link https://files.pythonhosted.org/packages/3e/5c/ad715fb57216877e8269dd63b6ccd11e7ba38f809cdab4f7a204c3e3fe28/RNAtools-0.8.4.tar.gz#sha256=6e6285c54bba3e492581c3b90b2dd86e1f2c2605c6298bee5280fdf0ce19a39b (from https://pypi.org/simple/rnatools/), version: 0.8.4
2021-07-13T10:15:34,012   Found link https://files.pythonhosted.org/packages/86/a9/5d78b7e0c804cff750b772986af2a91fc42e8034438970220b06b2395351/RNAtools-0.8.5.tar.gz#sha256=4c140b27589c54491eb270c7394e71f37d37e4162ee2f5689443316ea63e78b9 (from https://pypi.org/simple/rnatools/), version: 0.8.5
2021-07-13T10:15:34,012 Skipping link: not a file: https://pypi.org/simple/rnatools/
2021-07-13T10:15:34,031 Given no hashes to check 1 links for project 'rnatools': discarding no candidates
2021-07-13T10:15:34,050 Collecting rnatools==0.8.4
2021-07-13T10:15:34,051   Created temporary directory: /tmp/pip-unpack-cfg5dssx
2021-07-13T10:15:34,222   Downloading RNAtools-0.8.4.tar.gz (78 kB)
2021-07-13T10:15:34,343   Added rnatools==0.8.4 from https://files.pythonhosted.org/packages/3e/5c/ad715fb57216877e8269dd63b6ccd11e7ba38f809cdab4f7a204c3e3fe28/RNAtools-0.8.4.tar.gz#sha256=6e6285c54bba3e492581c3b90b2dd86e1f2c2605c6298bee5280fdf0ce19a39b to build tracker '/tmp/pip-req-tracker-m7j2q34_'
2021-07-13T10:15:34,344     Running setup.py (path:/tmp/pip-wheel-kj2wi5gp/rnatools_f96ac5b42ce44e8ea90fb86136530d2e/setup.py) egg_info for package rnatools
2021-07-13T10:15:34,345     Created temporary directory: /tmp/pip-pip-egg-info-xzgf6y9j
2021-07-13T10:15:34,345     Running command python setup.py egg_info
2021-07-13T10:15:35,725     running egg_info
2021-07-13T10:15:35,727     creating /tmp/pip-pip-egg-info-xzgf6y9j/RNAtools.egg-info
2021-07-13T10:15:35,728     writing /tmp/pip-pip-egg-info-xzgf6y9j/RNAtools.egg-info/PKG-INFO
2021-07-13T10:15:35,731     writing dependency_links to /tmp/pip-pip-egg-info-xzgf6y9j/RNAtools.egg-info/dependency_links.txt
2021-07-13T10:15:35,732     writing entry points to /tmp/pip-pip-egg-info-xzgf6y9j/RNAtools.egg-info/entry_points.txt
2021-07-13T10:15:35,734     writing top-level names to /tmp/pip-pip-egg-info-xzgf6y9j/RNAtools.egg-info/top_level.txt
2021-07-13T10:15:35,736     writing manifest file '/tmp/pip-pip-egg-info-xzgf6y9j/RNAtools.egg-info/SOURCES.txt'
2021-07-13T10:15:35,876     reading manifest file '/tmp/pip-pip-egg-info-xzgf6y9j/RNAtools.egg-info/SOURCES.txt'
2021-07-13T10:15:35,878     reading manifest template 'MANIFEST.in'
2021-07-13T10:15:35,883     writing manifest file '/tmp/pip-pip-egg-info-xzgf6y9j/RNAtools.egg-info/SOURCES.txt'
2021-07-13T10:15:35,978   Source in /tmp/pip-wheel-kj2wi5gp/rnatools_f96ac5b42ce44e8ea90fb86136530d2e has version 0.8.4, which satisfies requirement rnatools==0.8.4 from https://files.pythonhosted.org/packages/3e/5c/ad715fb57216877e8269dd63b6ccd11e7ba38f809cdab4f7a204c3e3fe28/RNAtools-0.8.4.tar.gz#sha256=6e6285c54bba3e492581c3b90b2dd86e1f2c2605c6298bee5280fdf0ce19a39b
2021-07-13T10:15:35,979   Removed rnatools==0.8.4 from https://files.pythonhosted.org/packages/3e/5c/ad715fb57216877e8269dd63b6ccd11e7ba38f809cdab4f7a204c3e3fe28/RNAtools-0.8.4.tar.gz#sha256=6e6285c54bba3e492581c3b90b2dd86e1f2c2605c6298bee5280fdf0ce19a39b from build tracker '/tmp/pip-req-tracker-m7j2q34_'
2021-07-13T10:15:35,983 Created temporary directory: /tmp/pip-unpack-1_ovh8cf
2021-07-13T10:15:35,984 Building wheels for collected packages: rnatools
2021-07-13T10:15:35,987   Created temporary directory: /tmp/pip-wheel-wiop4w0c
2021-07-13T10:15:35,988   Building wheel for rnatools (setup.py): started
2021-07-13T10:15:35,988   Destination directory: /tmp/pip-wheel-wiop4w0c
2021-07-13T10:15:35,988   Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-kj2wi5gp/rnatools_f96ac5b42ce44e8ea90fb86136530d2e/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-kj2wi5gp/rnatools_f96ac5b42ce44e8ea90fb86136530d2e/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-wiop4w0c
2021-07-13T10:15:37,379   running bdist_wheel
2021-07-13T10:15:37,384   running build
2021-07-13T10:15:37,385   running build_py
2021-07-13T10:15:37,518   creating build
2021-07-13T10:15:37,518   creating build/lib.linux-armv7l-3.9
2021-07-13T10:15:37,519   creating build/lib.linux-armv7l-3.9/RNAtools
2021-07-13T10:15:37,520   copying RNAtools/graph.py -> build/lib.linux-armv7l-3.9/RNAtools
2021-07-13T10:15:37,523   copying RNAtools/__init__.py -> build/lib.linux-armv7l-3.9/RNAtools
2021-07-13T10:15:37,526   running egg_info
2021-07-13T10:15:37,539   writing RNAtools.egg-info/PKG-INFO
2021-07-13T10:15:37,541   writing dependency_links to RNAtools.egg-info/dependency_links.txt
2021-07-13T10:15:37,543   writing entry points to RNAtools.egg-info/entry_points.txt
2021-07-13T10:15:37,544   writing top-level names to RNAtools.egg-info/top_level.txt
2021-07-13T10:15:37,550   reading manifest file 'RNAtools.egg-info/SOURCES.txt'
2021-07-13T10:15:37,553   reading manifest template 'MANIFEST.in'
2021-07-13T10:15:37,558   writing manifest file 'RNAtools.egg-info/SOURCES.txt'
2021-07-13T10:15:37,560   copying RNAtools/partAlign.pyx -> build/lib.linux-armv7l-3.9/RNAtools
2021-07-13T10:15:37,564   running build_ext
2021-07-13T10:15:37,625   cythoning RNAtools/partAlign.pyx to RNAtools/partAlign.c
2021-07-13T10:15:38,254   /usr/local/lib/python3.9/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-kj2wi5gp/rnatools_f96ac5b42ce44e8ea90fb86136530d2e/RNAtools/partAlign.pyx
2021-07-13T10:15:38,254     tree = Parsing.p_module(s, pxd, full_module_name)
2021-07-13T10:15:44,303   building 'RNAtools.partAlign' extension
2021-07-13T10:15:44,304   creating build/temp.linux-armv7l-3.9
2021-07-13T10:15:44,304   creating build/temp.linux-armv7l-3.9/RNAtools
2021-07-13T10:15:44,305   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c RNAtools/partAlign.c -o build/temp.linux-armv7l-3.9/RNAtools/partAlign.o
2021-07-13T10:16:06,866   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/RNAtools/partAlign.o -o build/lib.linux-armv7l-3.9/RNAtools/partAlign.cpython-39-arm-linux-gnueabihf.so
2021-07-13T10:16:07,074   installing to build/bdist.linux-armv7l/wheel
2021-07-13T10:16:07,074   running install
2021-07-13T10:16:07,076   running install_lib
2021-07-13T10:16:07,080   creating build/bdist.linux-armv7l
2021-07-13T10:16:07,080   creating build/bdist.linux-armv7l/wheel
2021-07-13T10:16:07,082   creating build/bdist.linux-armv7l/wheel/RNAtools
2021-07-13T10:16:07,083   copying build/lib.linux-armv7l-3.9/RNAtools/graph.py -> build/bdist.linux-armv7l/wheel/RNAtools
2021-07-13T10:16:07,086   copying build/lib.linux-armv7l-3.9/RNAtools/partAlign.pyx -> build/bdist.linux-armv7l/wheel/RNAtools
2021-07-13T10:16:07,088   copying build/lib.linux-armv7l-3.9/RNAtools/partAlign.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/RNAtools
2021-07-13T10:16:07,123   copying build/lib.linux-armv7l-3.9/RNAtools/__init__.py -> build/bdist.linux-armv7l/wheel/RNAtools
2021-07-13T10:16:07,126   running install_egg_info
2021-07-13T10:16:07,137   Copying RNAtools.egg-info to build/bdist.linux-armv7l/wheel/RNAtools-0.8.4-py3.9.egg-info
2021-07-13T10:16:07,152   running install_scripts
2021-07-13T10:16:07,192   creating build/bdist.linux-armv7l/wheel/RNAtools-0.8.4.dist-info/WHEEL
2021-07-13T10:16:07,195   creating '/tmp/pip-wheel-wiop4w0c/RNAtools-0.8.4-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2021-07-13T10:16:07,201   adding 'RNAtools/__init__.py'
2021-07-13T10:16:07,206   adding 'RNAtools/graph.py'
2021-07-13T10:16:07,488   adding 'RNAtools/partAlign.cpython-39-arm-linux-gnueabihf.so'
2021-07-13T10:16:07,501   adding 'RNAtools/partAlign.pyx'
2021-07-13T10:16:07,503   adding 'RNAtools-0.8.4.dist-info/METADATA'
2021-07-13T10:16:07,504   adding 'RNAtools-0.8.4.dist-info/WHEEL'
2021-07-13T10:16:07,505   adding 'RNAtools-0.8.4.dist-info/entry_points.txt'
2021-07-13T10:16:07,506   adding 'RNAtools-0.8.4.dist-info/top_level.txt'
2021-07-13T10:16:07,507   adding 'RNAtools-0.8.4.dist-info/RECORD'
2021-07-13T10:16:07,516   removing build/bdist.linux-armv7l/wheel
2021-07-13T10:16:07,842   Building wheel for rnatools (setup.py): finished with status 'done'
2021-07-13T10:16:07,852   Created wheel for rnatools: filename=RNAtools-0.8.4-cp39-cp39-linux_armv7l.whl size=537249 sha256=9c2f48be38b47abcdb6de616e48164d229821822eb7f160e7b868faf990290bf
2021-07-13T10:16:07,852   Stored in directory: /tmp/pip-ephem-wheel-cache-lc0pl9lx/wheels/76/1b/93/f2d71ce07c9683ebae62e9396ad57bc06deee15f6d85c8d71f
2021-07-13T10:16:07,863 Successfully built rnatools
2021-07-13T10:16:07,890 Removed build tracker: '/tmp/pip-req-tracker-m7j2q34_'