2021-07-13T10:21:49,882 Created temporary directory: /tmp/pip-ephem-wheel-cache-hraf9fl8
2021-07-13T10:21:49,885 Created temporary directory: /tmp/pip-req-tracker-ltd5lc8t
2021-07-13T10:21:49,886 Initialized build tracking at /tmp/pip-req-tracker-ltd5lc8t
2021-07-13T10:21:49,886 Created build tracker: /tmp/pip-req-tracker-ltd5lc8t
2021-07-13T10:21:49,886 Entered build tracker: /tmp/pip-req-tracker-ltd5lc8t
2021-07-13T10:21:49,887 Created temporary directory: /tmp/pip-wheel-6gaz2qo_
2021-07-13T10:21:49,917 1 location(s) to search for versions of ampal:
2021-07-13T10:21:49,917 * https://pypi.org/simple/ampal/
2021-07-13T10:21:49,917 Fetching project page and analyzing links: https://pypi.org/simple/ampal/
2021-07-13T10:21:49,918 Getting page https://pypi.org/simple/ampal/
2021-07-13T10:21:49,919 Found index url https://pypi.org/simple
2021-07-13T10:21:50,009   Found link https://files.pythonhosted.org/packages/3f/e5/03da3a77bba138c165451d3f8efb7fd32818aea4a6212b420c558e9088d8/AMPAL-1.0.0.tar.gz#sha256=3d8e8df30a9534d75b9771dfd45bd48706cc2409f8e7573da7a0951be85bf29d (from https://pypi.org/simple/ampal/), version: 1.0.0
2021-07-13T10:21:50,010   Found link https://files.pythonhosted.org/packages/c2/90/2aecb8bdeab8de4f896f38fc792b434292f0f96a86cd3b860c849f4cfd55/AMPAL-1.0.1.tar.gz#sha256=58e351534d49ef3a7b5267dd32462c20852a63213a36acfbf670e447009cac21 (from https://pypi.org/simple/ampal/), version: 1.0.1
2021-07-13T10:21:50,010   Found link https://files.pythonhosted.org/packages/29/39/ac32680ba515731a81942c3a1bb8d0731fc0da02185885794ccf51dd604b/AMPAL-1.1.0.tar.gz#sha256=ab6beac3f730bc12a65d821a8b3d7ca68643e29179f08fef0607d45078bf1022 (from https://pypi.org/simple/ampal/), version: 1.1.0
2021-07-13T10:21:50,010   Found link https://files.pythonhosted.org/packages/f4/11/85ef80392ed433f9024abc0bacc2173dd88ce0e7c42f23b804cc3650b1e5/AMPAL-1.2.0.tar.gz#sha256=9a62def0cbdd4b000c0d1e7a76441e7ba873f0da9ef018af1871638bb13214a7 (from https://pypi.org/simple/ampal/), version: 1.2.0
2021-07-13T10:21:50,011   Found link https://files.pythonhosted.org/packages/a4/9a/940d9cd5af9177e35487a99bf8bf0ae4c80b28eeca70c266ebc2f341cd4d/AMPAL-1.3.0.tar.gz#sha256=8f5a806e642f8978a8ef6ba678e3187e9fc4a6947c92e6fd35c2ccf03fa89276 (from https://pypi.org/simple/ampal/), version: 1.3.0
2021-07-13T10:21:50,011   Found link https://files.pythonhosted.org/packages/c9/14/728e14ff9e6c3372082ffc88a2f78016b05143f0d6bee5c432c002314169/AMPAL-1.4.0.tar.gz#sha256=ab0f6ee5284e923dac5f599c1e9c93dc2925ed3e63f156a8dd7cc58d69a0c5cc (from https://pypi.org/simple/ampal/), version: 1.4.0
2021-07-13T10:21:50,011 Skipping link: not a file: https://pypi.org/simple/ampal/
2021-07-13T10:21:50,029 Given no hashes to check 1 links for project 'ampal': discarding no candidates
2021-07-13T10:21:50,048 Collecting ampal==1.1.0
2021-07-13T10:21:50,050   Created temporary directory: /tmp/pip-unpack-gr4plnq0
2021-07-13T10:21:50,450   Downloading AMPAL-1.1.0.tar.gz (1.2 MB)
2021-07-13T10:21:50,903   Added ampal==1.1.0 from https://files.pythonhosted.org/packages/29/39/ac32680ba515731a81942c3a1bb8d0731fc0da02185885794ccf51dd604b/AMPAL-1.1.0.tar.gz#sha256=ab6beac3f730bc12a65d821a8b3d7ca68643e29179f08fef0607d45078bf1022 to build tracker '/tmp/pip-req-tracker-ltd5lc8t'
2021-07-13T10:21:50,904     Running setup.py (path:/tmp/pip-wheel-6gaz2qo_/ampal_2998e6fb9b2746c79d6eb95765ada13d/setup.py) egg_info for package ampal
2021-07-13T10:21:50,905     Created temporary directory: /tmp/pip-pip-egg-info-bnbft23q
2021-07-13T10:21:50,905     Running command python setup.py egg_info
2021-07-13T10:21:52,447     /usr/local/lib/python3.9/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-6gaz2qo_/ampal_2998e6fb9b2746c79d6eb95765ada13d/src/ampal/geometry.pyx
2021-07-13T10:21:52,448       tree = Parsing.p_module(s, pxd, full_module_name)
2021-07-13T10:21:55,911     Compiling src/ampal/geometry.pyx because it depends on /usr/local/lib/python3.9/dist-packages/Cython/Includes/libc/math.pxd.
2021-07-13T10:21:55,912     [1/1] Cythonizing src/ampal/geometry.pyx
2021-07-13T10:21:56,062     running egg_info
2021-07-13T10:21:56,064     creating /tmp/pip-pip-egg-info-bnbft23q/AMPAL.egg-info
2021-07-13T10:21:56,065     writing /tmp/pip-pip-egg-info-bnbft23q/AMPAL.egg-info/PKG-INFO
2021-07-13T10:21:56,068     writing dependency_links to /tmp/pip-pip-egg-info-bnbft23q/AMPAL.egg-info/dependency_links.txt
2021-07-13T10:21:56,070     writing requirements to /tmp/pip-pip-egg-info-bnbft23q/AMPAL.egg-info/requires.txt
2021-07-13T10:21:56,070     writing top-level names to /tmp/pip-pip-egg-info-bnbft23q/AMPAL.egg-info/top_level.txt
2021-07-13T10:21:56,072     writing manifest file '/tmp/pip-pip-egg-info-bnbft23q/AMPAL.egg-info/SOURCES.txt'
2021-07-13T10:21:56,223     reading manifest file '/tmp/pip-pip-egg-info-bnbft23q/AMPAL.egg-info/SOURCES.txt'
2021-07-13T10:21:56,224     reading manifest template 'MANIFEST.in'
2021-07-13T10:21:56,225     warning: no files found matching 'LICENSE.txt'
2021-07-13T10:21:56,248     writing manifest file '/tmp/pip-pip-egg-info-bnbft23q/AMPAL.egg-info/SOURCES.txt'
2021-07-13T10:21:56,444   Source in /tmp/pip-wheel-6gaz2qo_/ampal_2998e6fb9b2746c79d6eb95765ada13d has version 1.1.0, which satisfies requirement ampal==1.1.0 from https://files.pythonhosted.org/packages/29/39/ac32680ba515731a81942c3a1bb8d0731fc0da02185885794ccf51dd604b/AMPAL-1.1.0.tar.gz#sha256=ab6beac3f730bc12a65d821a8b3d7ca68643e29179f08fef0607d45078bf1022
2021-07-13T10:21:56,445   Removed ampal==1.1.0 from https://files.pythonhosted.org/packages/29/39/ac32680ba515731a81942c3a1bb8d0731fc0da02185885794ccf51dd604b/AMPAL-1.1.0.tar.gz#sha256=ab6beac3f730bc12a65d821a8b3d7ca68643e29179f08fef0607d45078bf1022 from build tracker '/tmp/pip-req-tracker-ltd5lc8t'
2021-07-13T10:21:56,449 Created temporary directory: /tmp/pip-unpack-32ophoc_
2021-07-13T10:21:56,450 Building wheels for collected packages: ampal
2021-07-13T10:21:56,454   Created temporary directory: /tmp/pip-wheel-tjhpzwjz
2021-07-13T10:21:56,455   Building wheel for ampal (setup.py): started
2021-07-13T10:21:56,455   Destination directory: /tmp/pip-wheel-tjhpzwjz
2021-07-13T10:21:56,456   Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-6gaz2qo_/ampal_2998e6fb9b2746c79d6eb95765ada13d/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-6gaz2qo_/ampal_2998e6fb9b2746c79d6eb95765ada13d/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-tjhpzwjz
2021-07-13T10:21:58,047   running bdist_wheel
2021-07-13T10:21:58,053   running build
2021-07-13T10:21:58,054   running build_py
2021-07-13T10:21:58,193   creating build
2021-07-13T10:21:58,194   creating build/lib.linux-armv7l-3.9
2021-07-13T10:21:58,195   creating build/lib.linux-armv7l-3.9/ampal
2021-07-13T10:21:58,196   copying src/ampal/ampal_warnings.py -> build/lib.linux-armv7l-3.9/ampal
2021-07-13T10:21:58,198   copying src/ampal/data.py -> build/lib.linux-armv7l-3.9/ampal
2021-07-13T10:21:58,200   copying src/ampal/ligands.py -> build/lib.linux-armv7l-3.9/ampal
2021-07-13T10:21:58,203   copying src/ampal/assembly.py -> build/lib.linux-armv7l-3.9/ampal
2021-07-13T10:21:58,205   copying src/ampal/pdb_parser.py -> build/lib.linux-armv7l-3.9/ampal
2021-07-13T10:21:58,208   copying src/ampal/nucleic_acid.py -> build/lib.linux-armv7l-3.9/ampal
2021-07-13T10:21:58,211   copying src/ampal/interactions.py -> build/lib.linux-armv7l-3.9/ampal
2021-07-13T10:21:58,213   copying src/ampal/pseudo_atoms.py -> build/lib.linux-armv7l-3.9/ampal
2021-07-13T10:21:58,216   copying src/ampal/__init__.py -> build/lib.linux-armv7l-3.9/ampal
2021-07-13T10:21:58,218   copying src/ampal/base_ampal.py -> build/lib.linux-armv7l-3.9/ampal
2021-07-13T10:21:58,221   copying src/ampal/amino_acids.py -> build/lib.linux-armv7l-3.9/ampal
2021-07-13T10:21:58,224   copying src/ampal/analyse_protein.py -> build/lib.linux-armv7l-3.9/ampal
2021-07-13T10:21:58,227   copying src/ampal/protein.py -> build/lib.linux-armv7l-3.9/ampal
2021-07-13T10:21:58,230   running egg_info
2021-07-13T10:21:58,244   writing src/AMPAL.egg-info/PKG-INFO
2021-07-13T10:21:58,246   writing dependency_links to src/AMPAL.egg-info/dependency_links.txt
2021-07-13T10:21:58,249   writing requirements to src/AMPAL.egg-info/requires.txt
2021-07-13T10:21:58,250   writing top-level names to src/AMPAL.egg-info/top_level.txt
2021-07-13T10:21:58,257   reading manifest file 'src/AMPAL.egg-info/SOURCES.txt'
2021-07-13T10:21:58,259   reading manifest template 'MANIFEST.in'
2021-07-13T10:21:58,260   warning: no files found matching 'LICENSE.txt'
2021-07-13T10:21:58,283   writing manifest file 'src/AMPAL.egg-info/SOURCES.txt'
2021-07-13T10:21:58,287   copying src/ampal/geometry.c -> build/lib.linux-armv7l-3.9/ampal
2021-07-13T10:21:58,327   copying src/ampal/geometry.cpython-36m-x86_64-linux-gnu.so -> build/lib.linux-armv7l-3.9/ampal
2021-07-13T10:21:58,391   copying src/ampal/geometry.pyx -> build/lib.linux-armv7l-3.9/ampal
2021-07-13T10:21:58,394   creating build/lib.linux-armv7l-3.9/ampal/__pycache__
2021-07-13T10:21:58,395   copying src/ampal/__pycache__/__init__.cpython-36.pyc -> build/lib.linux-armv7l-3.9/ampal/__pycache__
2021-07-13T10:21:58,397   copying src/ampal/__pycache__/amino_acids.cpython-36.pyc -> build/lib.linux-armv7l-3.9/ampal/__pycache__
2021-07-13T10:21:58,400   copying src/ampal/__pycache__/ampal_warnings.cpython-36.pyc -> build/lib.linux-armv7l-3.9/ampal/__pycache__
2021-07-13T10:21:58,402   copying src/ampal/__pycache__/analyse_protein.cpython-36.pyc -> build/lib.linux-armv7l-3.9/ampal/__pycache__
2021-07-13T10:21:58,405   copying src/ampal/__pycache__/assembly.cpython-36.pyc -> build/lib.linux-armv7l-3.9/ampal/__pycache__
2021-07-13T10:21:58,409   copying src/ampal/__pycache__/base_ampal.cpython-36.pyc -> build/lib.linux-armv7l-3.9/ampal/__pycache__
2021-07-13T10:21:58,412   copying src/ampal/__pycache__/data.cpython-36.pyc -> build/lib.linux-armv7l-3.9/ampal/__pycache__
2021-07-13T10:21:58,414   copying src/ampal/__pycache__/interactions.cpython-36.pyc -> build/lib.linux-armv7l-3.9/ampal/__pycache__
2021-07-13T10:21:58,417   copying src/ampal/__pycache__/ligands.cpython-36.pyc -> build/lib.linux-armv7l-3.9/ampal/__pycache__
2021-07-13T10:21:58,419   copying src/ampal/__pycache__/nucleic_acid.cpython-36.pyc -> build/lib.linux-armv7l-3.9/ampal/__pycache__
2021-07-13T10:21:58,422   copying src/ampal/__pycache__/pdb_parser.cpython-36.pyc -> build/lib.linux-armv7l-3.9/ampal/__pycache__
2021-07-13T10:21:58,425   copying src/ampal/__pycache__/protein.cpython-36.pyc -> build/lib.linux-armv7l-3.9/ampal/__pycache__
2021-07-13T10:21:58,429   copying src/ampal/__pycache__/pseudo_atoms.cpython-36.pyc -> build/lib.linux-armv7l-3.9/ampal/__pycache__
2021-07-13T10:21:58,431   creating build/lib.linux-armv7l-3.9/ampal/datafiles
2021-07-13T10:21:58,432   copying src/ampal/datafiles/amino_acids.json -> build/lib.linux-armv7l-3.9/ampal/datafiles
2021-07-13T10:21:58,437   copying src/ampal/datafiles/chemical_elements.json -> build/lib.linux-armv7l-3.9/ampal/datafiles
2021-07-13T10:21:58,442   copying src/ampal/datafiles/pdb_atom_column_format.json -> build/lib.linux-armv7l-3.9/ampal/datafiles
2021-07-13T10:21:58,447   running build_ext
2021-07-13T10:21:58,452   building 'ampal.geometry' extension
2021-07-13T10:21:58,452   creating build/temp.linux-armv7l-3.9
2021-07-13T10:21:58,453   creating build/temp.linux-armv7l-3.9/src
2021-07-13T10:21:58,453   creating build/temp.linux-armv7l-3.9/src/ampal
2021-07-13T10:21:58,454   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.9 -c src/ampal/geometry.c -o build/temp.linux-armv7l-3.9/src/ampal/geometry.o
2021-07-13T10:22:01,490   src/ampal/geometry.c:3694:18: warning: ‘__pyx_f_5ampal_8geometry__unit_vector’ defined but not used [-Wunused-function]
2021-07-13T10:22:01,490    3694 | static PyObject *__pyx_f_5ampal_8geometry__unit_vector(double *__pyx_v_a) {
2021-07-13T10:22:01,490         |                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-13T10:22:01,491   src/ampal/geometry.c:2911:15: warning: ‘__pyx_f_5ampal_8geometry__dot_product_2d’ defined but not used [-Wunused-function]
2021-07-13T10:22:01,492    2911 | static double __pyx_f_5ampal_8geometry__dot_product_2d(double *__pyx_v_a, double *__pyx_v_b) {
2021-07-13T10:22:01,492         |               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-13T10:22:42,982   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/src/ampal/geometry.o -o build/lib.linux-armv7l-3.9/ampal/geometry.cpython-39-arm-linux-gnueabihf.so
2021-07-13T10:22:43,258   installing to build/bdist.linux-armv7l/wheel
2021-07-13T10:22:43,258   running install
2021-07-13T10:22:43,259   running install_lib
2021-07-13T10:22:43,263   creating build/bdist.linux-armv7l
2021-07-13T10:22:43,264   creating build/bdist.linux-armv7l/wheel
2021-07-13T10:22:43,265   creating build/bdist.linux-armv7l/wheel/ampal
2021-07-13T10:22:43,266   copying build/lib.linux-armv7l-3.9/ampal/geometry.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/ampal
2021-07-13T10:22:43,325   copying build/lib.linux-armv7l-3.9/ampal/ampal_warnings.py -> build/bdist.linux-armv7l/wheel/ampal
2021-07-13T10:22:43,326   copying build/lib.linux-armv7l-3.9/ampal/geometry.pyx -> build/bdist.linux-armv7l/wheel/ampal
2021-07-13T10:22:43,330   copying build/lib.linux-armv7l-3.9/ampal/geometry.c -> build/bdist.linux-armv7l/wheel/ampal
2021-07-13T10:22:43,371   creating build/bdist.linux-armv7l/wheel/ampal/__pycache__
2021-07-13T10:22:43,372   copying build/lib.linux-armv7l-3.9/ampal/__pycache__/amino_acids.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/ampal/__pycache__
2021-07-13T10:22:43,374   copying build/lib.linux-armv7l-3.9/ampal/__pycache__/pdb_parser.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/ampal/__pycache__
2021-07-13T10:22:43,376   copying build/lib.linux-armv7l-3.9/ampal/__pycache__/nucleic_acid.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/ampal/__pycache__
2021-07-13T10:22:43,379   copying build/lib.linux-armv7l-3.9/ampal/__pycache__/ligands.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/ampal/__pycache__
2021-07-13T10:22:43,381   copying build/lib.linux-armv7l-3.9/ampal/__pycache__/data.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/ampal/__pycache__
2021-07-13T10:22:43,382   copying build/lib.linux-armv7l-3.9/ampal/__pycache__/interactions.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/ampal/__pycache__
2021-07-13T10:22:43,385   copying build/lib.linux-armv7l-3.9/ampal/__pycache__/ampal_warnings.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/ampal/__pycache__
2021-07-13T10:22:43,387   copying build/lib.linux-armv7l-3.9/ampal/__pycache__/__init__.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/ampal/__pycache__
2021-07-13T10:22:43,389   copying build/lib.linux-armv7l-3.9/ampal/__pycache__/assembly.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/ampal/__pycache__
2021-07-13T10:22:43,392   copying build/lib.linux-armv7l-3.9/ampal/__pycache__/protein.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/ampal/__pycache__
2021-07-13T10:22:43,395   copying build/lib.linux-armv7l-3.9/ampal/__pycache__/base_ampal.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/ampal/__pycache__
2021-07-13T10:22:43,399   copying build/lib.linux-armv7l-3.9/ampal/__pycache__/pseudo_atoms.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/ampal/__pycache__
2021-07-13T10:22:43,401   copying build/lib.linux-armv7l-3.9/ampal/__pycache__/analyse_protein.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/ampal/__pycache__
2021-07-13T10:22:43,406   copying build/lib.linux-armv7l-3.9/ampal/data.py -> build/bdist.linux-armv7l/wheel/ampal
2021-07-13T10:22:43,410   copying build/lib.linux-armv7l-3.9/ampal/ligands.py -> build/bdist.linux-armv7l/wheel/ampal
2021-07-13T10:22:43,413   copying build/lib.linux-armv7l-3.9/ampal/assembly.py -> build/bdist.linux-armv7l/wheel/ampal
2021-07-13T10:22:43,418   copying build/lib.linux-armv7l-3.9/ampal/geometry.cpython-36m-x86_64-linux-gnu.so -> build/bdist.linux-armv7l/wheel/ampal
2021-07-13T10:22:43,490   copying build/lib.linux-armv7l-3.9/ampal/pdb_parser.py -> build/bdist.linux-armv7l/wheel/ampal
2021-07-13T10:22:43,493   copying build/lib.linux-armv7l-3.9/ampal/nucleic_acid.py -> build/bdist.linux-armv7l/wheel/ampal
2021-07-13T10:22:43,495   copying build/lib.linux-armv7l-3.9/ampal/interactions.py -> build/bdist.linux-armv7l/wheel/ampal
2021-07-13T10:22:43,497   copying build/lib.linux-armv7l-3.9/ampal/pseudo_atoms.py -> build/bdist.linux-armv7l/wheel/ampal
2021-07-13T10:22:43,500   creating build/bdist.linux-armv7l/wheel/ampal/datafiles
2021-07-13T10:22:43,501   copying build/lib.linux-armv7l-3.9/ampal/datafiles/pdb_atom_column_format.json -> build/bdist.linux-armv7l/wheel/ampal/datafiles
2021-07-13T10:22:43,505   copying build/lib.linux-armv7l-3.9/ampal/datafiles/amino_acids.json -> build/bdist.linux-armv7l/wheel/ampal/datafiles
2021-07-13T10:22:43,509   copying build/lib.linux-armv7l-3.9/ampal/datafiles/chemical_elements.json -> build/bdist.linux-armv7l/wheel/ampal/datafiles
2021-07-13T10:22:43,513   copying build/lib.linux-armv7l-3.9/ampal/__init__.py -> build/bdist.linux-armv7l/wheel/ampal
2021-07-13T10:22:43,515   copying build/lib.linux-armv7l-3.9/ampal/base_ampal.py -> build/bdist.linux-armv7l/wheel/ampal
2021-07-13T10:22:43,518   copying build/lib.linux-armv7l-3.9/ampal/amino_acids.py -> build/bdist.linux-armv7l/wheel/ampal
2021-07-13T10:22:43,520   copying build/lib.linux-armv7l-3.9/ampal/analyse_protein.py -> build/bdist.linux-armv7l/wheel/ampal
2021-07-13T10:22:43,523   copying build/lib.linux-armv7l-3.9/ampal/protein.py -> build/bdist.linux-armv7l/wheel/ampal
2021-07-13T10:22:43,526   running install_egg_info
2021-07-13T10:22:43,537   Copying src/AMPAL.egg-info to build/bdist.linux-armv7l/wheel/AMPAL-1.1.0-py3.9.egg-info
2021-07-13T10:22:43,551   running install_scripts
2021-07-13T10:22:43,620   creating build/bdist.linux-armv7l/wheel/AMPAL-1.1.0.dist-info/WHEEL
2021-07-13T10:22:43,623   creating '/tmp/pip-wheel-tjhpzwjz/AMPAL-1.1.0-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2021-07-13T10:22:43,626   adding 'ampal/__init__.py'
2021-07-13T10:22:43,629   adding 'ampal/amino_acids.py'
2021-07-13T10:22:43,631   adding 'ampal/ampal_warnings.py'
2021-07-13T10:22:43,634   adding 'ampal/analyse_protein.py'
2021-07-13T10:22:43,637   adding 'ampal/assembly.py'
2021-07-13T10:22:43,641   adding 'ampal/base_ampal.py'
2021-07-13T10:22:43,642   adding 'ampal/data.py'
2021-07-13T10:22:43,756   adding 'ampal/geometry.c'
2021-07-13T10:22:44,176   adding 'ampal/geometry.cpython-36m-x86_64-linux-gnu.so'
2021-07-13T10:22:44,684   adding 'ampal/geometry.cpython-39-arm-linux-gnueabihf.so'
2021-07-13T10:22:44,712   adding 'ampal/geometry.pyx'
2021-07-13T10:22:44,714   adding 'ampal/interactions.py'
2021-07-13T10:22:44,715   adding 'ampal/ligands.py'
2021-07-13T10:22:44,716   adding 'ampal/nucleic_acid.py'
2021-07-13T10:22:44,719   adding 'ampal/pdb_parser.py'
2021-07-13T10:22:44,723   adding 'ampal/protein.py'
2021-07-13T10:22:44,725   adding 'ampal/pseudo_atoms.py'
2021-07-13T10:22:44,727   adding 'ampal/__pycache__/__init__.cpython-36.pyc'
2021-07-13T10:22:44,729   adding 'ampal/__pycache__/amino_acids.cpython-36.pyc'
2021-07-13T10:22:44,731   adding 'ampal/__pycache__/ampal_warnings.cpython-36.pyc'
2021-07-13T10:22:44,734   adding 'ampal/__pycache__/analyse_protein.cpython-36.pyc'
2021-07-13T10:22:44,738   adding 'ampal/__pycache__/assembly.cpython-36.pyc'
2021-07-13T10:22:44,742   adding 'ampal/__pycache__/base_ampal.cpython-36.pyc'
2021-07-13T10:22:44,743   adding 'ampal/__pycache__/data.cpython-36.pyc'
2021-07-13T10:22:44,745   adding 'ampal/__pycache__/interactions.cpython-36.pyc'
2021-07-13T10:22:44,746   adding 'ampal/__pycache__/ligands.cpython-36.pyc'
2021-07-13T10:22:44,748   adding 'ampal/__pycache__/nucleic_acid.cpython-36.pyc'
2021-07-13T10:22:44,750   adding 'ampal/__pycache__/pdb_parser.cpython-36.pyc'
2021-07-13T10:22:44,755   adding 'ampal/__pycache__/protein.cpython-36.pyc'
2021-07-13T10:22:44,758   adding 'ampal/__pycache__/pseudo_atoms.cpython-36.pyc'
2021-07-13T10:22:44,765   adding 'ampal/datafiles/amino_acids.json'
2021-07-13T10:22:44,770   adding 'ampal/datafiles/chemical_elements.json'
2021-07-13T10:22:44,788   adding 'ampal/datafiles/pdb_atom_column_format.json'
2021-07-13T10:22:44,790   adding 'AMPAL-1.1.0.dist-info/METADATA'
2021-07-13T10:22:44,791   adding 'AMPAL-1.1.0.dist-info/WHEEL'
2021-07-13T10:22:44,792   adding 'AMPAL-1.1.0.dist-info/top_level.txt'
2021-07-13T10:22:44,792   adding 'AMPAL-1.1.0.dist-info/RECORD'
2021-07-13T10:22:44,825   removing build/bdist.linux-armv7l/wheel
2021-07-13T10:22:44,951   Building wheel for ampal (setup.py): finished with status 'done'
2021-07-13T10:22:44,981   Created wheel for ampal: filename=AMPAL-1.1.0-cp39-cp39-linux_armv7l.whl size=2102105 sha256=51ff0c97bbafd1243a607efae14185a8cded80a107c03a701d6a74f1e8ffdbbc
2021-07-13T10:22:44,981   Stored in directory: /tmp/pip-ephem-wheel-cache-hraf9fl8/wheels/ef/0d/41/fb692d3f63dcc2053d7c036011c8b1b08a719f953a8a126b4f
2021-07-13T10:22:44,992 Successfully built ampal
2021-07-13T10:22:45,057 Removed build tracker: '/tmp/pip-req-tracker-ltd5lc8t'